TCONS_00007428 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007428
Unique NameTCONS_00007428
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length595

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007428 ID=TCONS_00007428|Name=TCONS_00007428|organism=Clytia hemisphaerica|type=transcript|length=595bp
NNTCGATGCAATCGTTTTTACTGCGACGTAACCATGGGCAGCTTCTTCAT
AATGTTTTGTTATGTTATTCTGTTTTCTCAGTGAAACCATGCGTTCCTTC
ACTTCGGACATCTTTGACCACCAAACTATGTCTTTCAGGACATTTTAATC
ATTCTTCTATTGATAACGGTGTGTTTGACTGTTTCTTTTTagcttcttcg
ttttcttcGATTGAAGATAAGCTTGTTTTTGACTCGCTTTCTTCTGTTGT
TGAGGTTAATCTCTTCCCACTGCGAAACCATCTCTTGTGCATACTTTTGA
TTCGTTATGTCGAACTATCTTTTTAATTGCAAACAAATTGCGTTCAAATG
TATGTTTATTTCTTTATGCAGCCATGTGCATACTTTCATTTTGGGCATTC
TTTTCAACCACTTGTGCAATaccaattttttgttcatttcgaTTGTTTGT
GCATCATTAAAACAGTTCTGTTTGACATTATGCACTTCTTCGGTACATTT
CTCGAAACATCTAGACAATATTTcgtttgtttgctttgttttcaaaactt
ttcagcttgataaacaacttttttcatcttctgtgatgaaatttt
Run BLAST on NCBI

transcript from alignment at sc0000076:486621..487215

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007428 ID=TCONS_00007428|Name=TCONS_00007428|organism=Clytia hemisphaerica|type=transcript|length=595bp|location=Sequence derived from alignment at sc0000076:486621..487215 (Clytia hemisphaerica)
aaaatttcatcacagaagatgaaaaaagttgtttatcaagctgaaaagtt
ttgaaaacaaagcaaacaaacgAAATATTGTCTAGATGTTTCGAGAAATG
TACCGAAGAAGTGCATAATGTCAAACAGAACTGTTTTAATGATGCACAAA
CAAtcgaaatgaacaaaaaattggtATTGCACAAGTGGTTGAAAAGAATG
CCCAAAATGAAAGTATGCACATGGCTGCATAAAGAAATAAACATACATTT
GAACGCAATTTGTTTGCAATTAAAAAGATAGTTCGACATAACGAATCAAA
AGTATGCACAAGAGATGGTTTCGCAGTGGGAAGAGATTAACCTCAACAAC
AGAAGAAAGCGAGTCAAAAACAAGCTTATCTTCAATCgaagaaaacgaag
aagctAAAAAGAAACAGTCAAACACACCGTTATCAATAGAAGAATGATTA
AAATGTCCTGAAAGACATAGTTTGGTGGTCAAAGATGTCCGAAGTGAAGG
AACGCATGGTTTCACTGAGAAAACAGAATAACATAACAAAACATTATGAA
GAAGCTGCCCATGGTTACGTCGCAGTAAAAACGATTGCATCGANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004186XLOC_004186Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007428-exon-sc0000076-1491911889:486621..487215TCONS_00007428-exon-sc0000076-1491911889:486621..487215Clytia hemisphaericaexon
TCONS_00007428-exon-sc0000076-1510915933:486621..487215TCONS_00007428-exon-sc0000076-1510915933:486621..487215Clytia hemisphaericaexon
TCONS_00007428-exon-sc0000076-1575043694:486621..487215TCONS_00007428-exon-sc0000076-1575043694:486621..487215Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000076supercontigsc0000076:486621..487215 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.247315	0.101054	0.518429	0.296255	4.10955	3.92818	5.93684	6.5645	0.372053	0.687826	0	0.477064	0.494863	0.507877	0.0618038	0.577888	0.325632	0.240929	0.703713	0.456554	0.958639	1.10106	0.482502	0.726396	0.386663	0.820578	1.28371	3.07346	0.672917	1.52899
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007428 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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