TCONS_00007433 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007433
Unique NameTCONS_00007433
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length656

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007433 ID=TCONS_00007433|Name=TCONS_00007433|organism=Clytia hemisphaerica|type=transcript|length=656bp
AAAACCATCACCAGTCTCCTCAAAAGCTAACATCGCCGCTAACGGTTAGG
CGTATTGTCGCGGGCGGGCCGCTACCGCTCAATAAGTAACTCCCGACAGT
AGTCATCAACAGTAGTCATCAACAGCAATATTTATATTTGTCCCCGGATT
AGTTCATAATCCCAAGCTATTATTGGAAGAGAACCGGTTAggtattttaa
aattcaaattacgAGTAGTAGCAGATTTAAGTTTGATGCATCAATTcttc
aataaaataaataaccGTAAAATCCACATAATAAAGTCTCAGTAATCCAT
TCAGTCTTAATAAGTCAATAATATCAATACCATTTCACCAAAACCCTCTA
CTGTTGGATCAGCGAAGCCTCTGCTTCATTTCACTCCTTCACGCATTTAT
CAGCCTCACATGTATTCTTCAGTGTCAAACAATAAATCTCCCCAAACAGT
GAGAACCAACCTCGATCAGAGTCAGTTTGAAAGACCCTTTTCGTTTCTCT
GTTTCTCGTACGTTCTGTAATGCACAATATGTGCCTAGTGGTTTTCTACA
GTTCATCACGTGACATTTTTCGTAatggccggtctccactttcgtgcGAA
ATGGACAACAGTTTttaacgtcataaaaaagtttcgtgcgaacaaaaaaa
agtgga
Run BLAST on NCBI

transcript from alignment at sc0000076:572238..572893

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007433 ID=TCONS_00007433|Name=TCONS_00007433|organism=Clytia hemisphaerica|type=transcript|length=656bp|location=Sequence derived from alignment at sc0000076:572238..572893 (Clytia hemisphaerica)
tccacttttttttgttcgcacgaaacttttttatgacgttaaAAACTGTT
GTCCATTTCgcacgaaagtggagaccggccatTACGAAAAATGTCACGTG
ATGAACTGTAGAAAACCACTAGGCACATATTGTGCATTACAGAACGTACG
AGAAACAGAGAAACGAAAAGGGTCTTTCAAACTGACTCTGATCGAGGTTG
GTTCTCACTGTTTGGGGAGATTTATTGTTTGACACTGAAGAATACATGTG
AGGCTGATAAATGCGTGAAGGAGTGAAATGAAGCAGAGGCTTCGCTGATC
CAACAGTAGAGGGTTTTGGTGAAATGGTATTGATATTATTGACTTATTAA
GACTGAATGGATTACTGAGACTTTATTATGTGGATTTTACggttatttat
tttattgaagAATTGATGCATCAAACTTAAATCTGCTACTACTcgtaatt
tgaattttaaaataccTAACCGGTTCTCTTCCAATAATAGCTTGGGATTA
TGAACTAATCCGGGGACAAATATAAATATTGCTGTTGATGACTACTGTTG
ATGACTACTGTCGGGAGTTACTTATTGAGCGGTAGCGGCCCGCCCGCGAC
AATACGCCTAACCGTTAGCGGCGATGTTAGCTTTTGAGGAGACTGGTGAT
GGTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004191XLOC_004191Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007433-exon-sc0000076-1491911889:572238..572893TCONS_00007433-exon-sc0000076-1491911889:572238..572893Clytia hemisphaericaexon
TCONS_00007433-exon-sc0000076-1510915933:572238..572893TCONS_00007433-exon-sc0000076-1510915933:572238..572893Clytia hemisphaericaexon
TCONS_00007433-exon-sc0000076-1575043694:572238..572893TCONS_00007433-exon-sc0000076-1575043694:572238..572893Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000076supercontigsc0000076:572238..572893 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0793686	0.154794	0.539191	1.4067	0	0	0	0	0	0.0828446	0	0.052859	0	0.109637	0.0901362	0	0.119163	0	0	0	0	0.11229	0	0	0	0.0760519	0.21766	0.232293	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007433 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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