TCONS_00007443 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007443
Unique NameTCONS_00007443
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1921

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007443 ID=TCONS_00007443|Name=TCONS_00007443|organism=Clytia hemisphaerica|type=transcript|length=1921bp
CTTTTTCCTGTTATCGATTTCGATTATGACTATATCGAGCTTTGTCATca
gttgtttttcaaattttcatcacGCTGCATTGTCCCATGTCCATTCAAAA
AATCTGACTATGGTTTGATATCGCCAAGAACGTTCCAAAATTTTGATGCT
CGAAAGACTAATTTTAAAGATGCAAGATATTTTTCACAATCTTTGGAATC
TTGCTTTCCTGATTTGACCGAAAGAGTTCGATTTTGCAACAAATTCTTTC
AATGCTTTTTGTGTTGGCAGCTGGTTGGAGGGAAAAATAGTGGTAAAACG
TCATGGTCAAAAGTGTTCTTTGGGTTGATGGCCAAAGAAAAAATTGCCGT
TCTTTCAAAGGAGGAGCATTTTGGAGCATCAATGATCCAAGACGACACTG
AGCTTCTTTGGGTAgatgaatggaaaaaaaaagaTGTTGTCGGAAGACAC
TTTGAAAACCAAGATGCAGGGTGGGTCCTTTTGCCAATCTGTCAAACACA
AAAACCCAAAAATGCAAAACATGCAGGCAGGAGTGTACATAACATGCAAC
AAAATACCAGATTACGGCAACaaacaagaaaatgtcaaaCTGCGCCTCTA
CATTTGTCgaacaaaaaaacttaaaagaacCTGTCTCGATGCACCGAGGT
GGATCCAAGAAAATGCCATGCAGTGTCTTTTATGGCTGGCACTGTTTATT
AATCAAAACATCGAACATGTTGAGCCGGAAGAAAGGTTTTATGAACGCGC
CAAGGACGTCAGTGCTAAGGCAACAGTGACAAAGAATGTCCCCAGGCATA
TTCTCAAACAAATACGAACTGACACCCTATTTAATCCAAAAATACCCGCA
GTCCCGGCTCCAAAAGACAGTGATAATGCAGATCGTTCAAATACAGGCAA
ATGTGAAAAGGGTCAGCTGGTATAGTGCTAACTTCGTCATATTGGTCGCT
CCACTTCACCCACGCGTTCCATCCGTAaagaaaaattgtcaaaagtACTG
CTGGATTATGATCGCGTTGAGGAATATTCTGATGATGACGATTTTTTTAC
AGATACACTTGCAGCTGACACAAGCAGCGAACAACAACGATGGATACTTA
ATGTTGTTGCGTCGCCGAAATATGGACCAATGGTGGATCGCCAAAGTAGG
GTGGAGCCAAACCCACCGCAATAAAACACTAGTGGAATGTCATGAACTAT
GTGCTAAAGAAAGgtttGCTTTATTATGGTGGTATTGTTGGAAACATTCT
CAGAACTCGAGCGACTccctacccagctggcacacaacgttcttttaacg
tttatctaacgttcacaagaTCCATCTATccgttagatgaatgttgaaaa
aacgttgtgtgccagttgggtaGGTTGATGGCATCCACTatcggattcgt
gctccttatagagggcCACAGACTTATGGAATTACTCTCCCTCCTGAGGG
ATACTACCtcgggttttgtagaggtctacgATTCAAGACTAGAGACTCTC
ATGTTTTTGGGAATATTATTTTCAGATCTTGGAATACACAAAAGTTCCTA
TcagcagattcatgtaaaaaaatcccgaaaaaatGTCGAGTGAATTCTAA
TTGGCTGAGACATGCAAAAATTACCTCATACTTTAGAGACATTGCTAAGG
GTATAGTATATGTAGAGTATGTGGCCCCCACCTTATACGTCAATCAAATC
Taaaagttttctcaaatttagaggaaaagaagtttctcaaaaatttctcg
agatatctttaagatatgagtACAAAagtttgaccatagtttggaaatgt
gatttagagggttttgtttataaatttgtttgataaaaaccTCCAAAACA
TAGGCGTGGTTAaattcaaattattaagcccagtgaaactgaaaatatta
agctttaaagttatttttctc
Run BLAST on NCBI

protein sequence of TCONS_00007443-protein

>TCONS_00007443-protein ID=TCONS_00007443-protein|Name=TCONS_00007443-protein|organism=Clytia hemisphaerica|type=polypeptide|length=207bp
LFPVIDFDYDYIELCHQLFFKFSSRCIVPCPFKKSDYGLISPRTFQNFDA
RKTNFKDARYFSQSLESCFPDLTERVRFCNKFFQCFLCWQLVGGKNSGKT
SWSKVFFGLMAKEKIAVLSKEEHFGASMIQDDTELLWVDEWKKKDVVGRH
FENQDAGWVLLPICQTQKPKNAKHAGRSVHNMQQNTRLRQQTRKCQTAPL
HLSNKKT
Run BLAST on NCBI

transcript from alignment at sc0000077:47168..57082+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007443 ID=TCONS_00007443|Name=TCONS_00007443|organism=Clytia hemisphaerica|type=transcript|length=9915bp|location=Sequence derived from alignment at sc0000077:47168..57082+ (Clytia hemisphaerica)
CTTTTTCCTGTTATCGATTTCGATTATGACTATATCGAGCTTTGTCATca gttgtttttcaaattttcatcacGCTGCATTGTCCCATGTCCATTCAAAA AATCTGACTATGGTTTGATATCGCCAAGAACGTTCCAAAATTTTGATGCT CGAAAGACTAATTTTAAAGATGCAAGATATTTTTCACAATCTTTGGAATC TTGCTTTCCTGATTTGACCGAAAGAGTTCGATTTTGCAACAAATTCTTTC AATGCTTTTTGTGTTGGCAGCTGGTTGGAGGGAAAAATAGTGGTAAAACG TCATGGTCAAAAGTGTTCTTTGGGTTGATGGCCAAAGAAAAAATTGCCGT TCTTTCAAAGGAGGAGCATTTTGGAGCATCAATGATCCAAGACGACACTG AGCTTCTTTGGGTAgatgaatggaaaaaaaaagaTGTTGTCGGAAGACAC TTTGAAAACCAAGATGCAGGGTGGGTCCTTTTGCCAATCTGTCAAACACA AAAACCCAAAAATGCAAAACATGCAGGCAGGAGTGTACATAACATGCAAC AAAATACCAGATTACGGCAACaaacaagaaaatgtcaaaCTGCGCCTCTA CATTTGTCgaacaaaaaaacttaaaagaacCTGTCTCGATGCACCGAGGT GGATCCAAGAAAATGCCATGCAGTGTCTTTTATGGCTGGCACTGTTTATT AATCAAAACATCGAACATGTTGAGCCGGAAGAAAGGTTTTATGAACGCGC CAAGGACGTCAGTGCTAAGGCAACAGTGACAAAGAATGTCCCCAGGCATA TTCTCAAACAAATACGAACTGACACCCTATTTAATCCAAAAATACCCGCA GTCCCGGCTCCAAAAGACAGTGATAATGCAGGTGAGCTATTTTTCATTAT ATATACTTTATTTCTAATGCTGCAAGCagtcaaagttttcaaaaaacttt aagCAACAtgaattcttttcttttcccCTAGCTCTGTGACCATAGTAATT CGCCAACTAAAAAAACCCTTACACCCATGCCCAAAGAAGAAAAGACACag tattttctttgtattttggTGTTAGGGCTTTCAGCACTGAGAATACAAAG GGCAAAGGATTGTAGTTCAGTCTTCTCTTCAAACTATCCTTTAAATATCA ATTCCTAGACTTTTCCGATTTCCAACGACCATGCACATCAATTTCTCTTT CGGACACTCCGTTGTTATAATAGCTGCTGTTGCACATAGAATGTGTACAG AATTACCTAACATCTTCAGTTATTGGTACGACTGAACTTAGCAAGCTAAG GAACTCTTTTCTTGCCGTTGTATAGCTGATTTTATGTTCTCCTATTGCCT TATGACCTTTCTTTGTCTTGACTATCTTACATAAGATATATACCTCTGTA TCGTCCTTTAGTTTAAGCCTTTGCGAGGTAATCGCTTAATAACTTGTAAT TACTTGTCTTATCGAGCAGGGACTGTCTATATCTAAAAAGTAACCTTATC TCCATGTCTGTTTTGATCAGTTTTCGATTTTTCTAGGATAAAGTCAATGT GATCTGGGCTAGAAACAAAATGTTTAACTTGCAACCATAAGATTTCATCT TTGCGGAGAAAACTGAAATAGCCAATTAAAACAGTTAATAGAAAACGTGT GTGCAAAAGGTTTTCGCTGTTTCCATACTTCTCACATACCTGTTTTACTA ATTCAGGCGATAGAGGCTCTTTTTGATTTGACACTTTGTGCTCGGAGGCT AGACGTAACGTTCCTTTGAAAGTCAACTGTACTAGACAATTATCTGTTGG GGATAAGTACCCTTTTCTCAAATGACCACACCTTATTCCTGTTAATGTAA TCGCTCctggttgttttttttctctcttgaCAGATCGTTCAAATACAGGC AAATGTGAAAAGGGTCAGCTGGTATAGTGCTAACTTCGTCATATTGGTCG CTCCACTTCACCCACGCGTTCCATCCGTAAGATTATTTTCTAGCTGTGCT CTCTGCCCAGTTGGCGTCGATTAATATATATAAATTGTAGCCTTTTTCAC GAAGCTCTTTGTTTTGAATAGTCTCCAATCTTTCCTCCGAGCTCTCTTCC TCTGTGCCTACAAGCAATTGAATAAGAGCTCTGTTATTCTGATATATTAA CAATCGTTCGTACTAACCAGCTAACAACTGGTACAGAAAAAGACCAATTT TTAACCTCTACCAAGCTACTGTTGGTAATGTGCAAAATTCAAGATTCTGT ACTACCCAGATAGTACCCCCCACCGGGGTAATGGTATTAAAAAGAATTTC TATATTTAGGTATTTTTCGTACAGGAAATTATATTATTCACATGTCCtct caatatttgaaaaatctaaatacaGAGCAATCGAATTGAAATTTGTAAAT CCTTTGAATAGTGAACTACAATTTGATATAAAATATGGTTGTAAAATTGG ATCCGCTGACACAAAACTCTCGAAAATCCCTTCTTTTTTGACTAGCAATG GCCAATAATAAGCTGATCTCCAAAGCGGAACAAACAATACATCTCTTCCT TTGCAGTTCTTAAATGTCGTAAAGTATAACCTAAAGCCAGTTAAAATGGT TACTCCAATCGCAAGAAAAACTGTCCACTCCTGAGGTGCCGGGAcaataa aatttggaattaaACGTGTCAACTTTTCTGTTGGGTATAAGAGGCAAATC GATCAAATGCAAATGTTCCGAATTTCTTCTGAATATAACTGAATGATTCA AAATCATTGCTCCAATCATCATAATCAATATACTTGGAAATTTGGTTTAC AATTTGGTTGTATTTCCTCGTTATCCACTGTGTAGTGATATCTATATCGA ATCTTaaacaaagtttgaaaatgtATTGAAGATAAGGCTTTCTGTTGCGA TTTGAATAATTCTTGCTACATGTTATCTGAATGCCACAGAACTCTTTGCC CCCTCTTTGCTTAGCCAGAATTAAGTAAAAACTGTCCAGCGAATATTTTA CTGCCAAAAGTTCTCTGTAAGTTGAACTTGctcctttattttcaaaagaa ttgaattTATCTCGAGCTACAATACTACCAAGACTTTCTATAACGAAACT ACCGTACCCCTCTTCGCTGgcatctgaaaaaaaaagaactccTTGTAAAC TTCTTTATCCAAGTCATACTGGTGGTCCCAACTAGGTGTTACGTTTATGA AATAGAACAAATGTCTAGTCGAAATCTGTGCGACTGGACCAATCGCATGT TTCATACTGATGATCATGCCTGCGACTCTTGATATTTCTCTGGCAGAACA TCTCTGACGTAGAATAAGATTTGTTAGTAAATTCTTTAGAgcagatattt tcttttttggtacgaaaaatttgaaaacttcagAATTGATAATAAATCCA AGCCATGTACAAGATTTTATTACATGTACAATATTCTTTCCGTGAGTGAG GTTGTGAGGTGTGatatttaaaaagtattttcatttttatttatttattt aaagacAATTAAGTTTTGTAACACAAAAGACCCGTGCCGGGACTGGCTCC GGTAATAGTATACAGTATACTATATAGCAATATGATTTCGAACGCGTGAT TTGATGTACAAGATTTTGAGGAGTACAGGTGTGAATTTTCTTCGTTTATG GTGAGCCCTAAAAACATAACATGCTGATGCTAAACCAAATGGTAGTACTT GAAATAATTCCCCCCTAACTTCTCAGACTCCAAAatggccaatttcttaa gaaaatttggagaaaaaaaaatttgttgtttttcattaaatctgtcgttc tttttgtttatttttagtaatacaGGATTTGTTAGATAAAACTACTTACt cacagccaattcgattgacttcaaaatatgccatttttgccctgattgcc aattattttgcattcgattgacaaaaatttggcaaatgtggcaaaatttg agtgccataaatgccaaataaaaaagatgtggtgaatctggcattcttgg catttttggaacttacctccatactgctccatacaaaacactgttcccac gagacctgtgttcttttcgctccaattttgccatttttgccaaagatttt gaaaaaaaaaagaccttccaatgctaaagcaaaacaatgccgatcggcaa tttgattggttaaaaaaaccGCCCGGGCGTATAAACACTTCGCGCTTTAC AAACGCCAACAGAAAACTGCTGACGAAGCATCACAAAACgaaaatcataa tggcggcgtagcgatgtacaaatttgcTATGTAGCTATGATCTTTTGACA TTAAAATTGTGGATTTGGCAGTTGTtgagtatggcaaattttgaagtcaa tcgaattggctgttaggaccaagtttctcaatcctggGCAAGCTAAATCT TTGATCGAAATTtatttgaaagtggtacccctaatggtagcactactata ggggtgaaaatgcatcgagagcgctagatctactttccctccaATACTTT TGATgctgtagcgccgttagacgttaatttttaacattgcgaTGGCTTTT TCTCGGGtagcaatttcaaaaaaactccgatcacaGACGGctgatatagc ttggtccagggtatataaggTCAGTGGATAGAACCCCTCTTGAATgcatg aatttgaaaaaaaaaaacgtgaaaatttacatgaattgaaggtccgctaA TACAAGTAGTCTACACGCGGTTGCTGCAAAGGGGTGTTTATTTCTTTATA CATAGAATAGAATTCACACATCACAATCATGTTAAAACTGTATGTATTTA AACAGGTTGACATTTTGTCTTCtatcttcaaaacaaaaattgaaaacaaa aattcgtAAATCAAATGATAATATACGGACTGAAATAGAAAGTATTCAAA TGAGAAGGGAAATAAATATATTAAAATCTGAGTTAACAAATAACTTGATA GCGAATATAAGCTGTAAAATTATTCAATAATGTGAAACATGGAATTATAT TTATAGTAGAATAATATTTGAATATATTTCATGGGAATAAATTTTTGTGG CAACATTTAATATAGAGAAGCTGGATTCGTTCAAAAATTGGGATGATAGC CACCAGCTCCGCGGGGATAATTGCTCTCTACCATTTTCtactttacacgt tttttttttataaggaaccttaactttgctctgagcctggagttccttat ttttacagagaatttcagtctcaaagttccttatcgagttccttactaca taggaaattttgagctttttgtcccttgaaagatcaagatttggtcaaat tagtcccaataaggtacattattttcaaatcaacttattctcagcctgag caattccttaacaattccttattttttgaaccattttcagccttgagttc cttataaacgtgttccttataaaaaaaaaaaacgtgtatatgatTTCTTC TCGTAAAAATTATCTTAAAGGAAcaaattttgacgggaatttaatttggc gggcgggcgaaaaaagattttcagacggagtttaatttggcggatggcta ataaatttaaatttagtgggaatttaatttggcagatgaaTGATAATTTT GGCGACAGTAAAAGACCTGTTTTTAGACCTGAAATAGCAGGAATTCAGGA AATAAGTAAAATAATTTGGaattggcgggaatttaatttggtggatttcg gctaaatccgccaaatcagctaaattttctttccgaaaaaatttcttctc gggtgaaacaaggcatgtcccaaatatattttgcgtgacgcgcaccgctt tcaattattccttaacgttcatatatagctcaaaagaatcatatcaaCGA GCGGATTTCAAAAAgcgctgggtcaaaaatttgcattaagccaatctcaa gatatcggtcaaaaattgattttgacgttataaaatacatcgaaaaaaca cgtcataagtaagattcaaatgacgtcattattgaaagacagcgataact tcaattttattaatgcaatcaacaccaaattttgactggagttgtaaatt aatgattctgaaacatttgttcaaaaattttcagaaaatttgaatgacgt catttgttgtcgggaaaaattaaaatacgtcaaaaaatgctgacgtcatc gtgaattttaaaattttttttcatgaaatatttagAATCGTTACTTTACA TCttcagtcaaaattttgctttgattgtaGTAAGTTAATCAGAATTATCG CCATtatttcaataatgacgtcatttaaattgtctttttgacgtgttttt ggGTGTATTTTATCAcgtcaaaatcattttttggccgatatcttgagatt ggcttcatgtaaatttttgacccagcacttttcgaaatcctctcgttgat acgattcttttgagctatatatgaaagtTAATGTATCGGACGGAGggtcg agacaaaaataccattagatgctagaaatttccttaagttaatgaataat gggaagcggtgtgcgtcacgcaaaatatatttgggacatgccttgtttca cccgagttCCCTTTTAAAAGGTACATAGAAGCAAAACAAAGATTGAATCC AAAGTCAAATCCTTGTATTTTGTTTGTCTTCATAAAGTTCAGTCCCAGTT CAGTTAACCAAAGGATAGTCCGATAAAGTCAAATAGTCATTCTGTACTTC GAAATTCCAAGCAGGCAGAAATGAAACAAGATGCTAAAATTTTTTTGGAC TATCCTTTGTACTACTTTAATCGtggaaattttagcgagactagtTTTAG CATTTTAGCGAGTGTTCCCTaatttcgctaaaataaatctcactaaaaca cgccgaatcgacagatcgctaaaattcaTCCGcacgaaatttctggttat attgccttgatacatttttgtcaataggaagggttacagtgcaaagaaat gctagaaaacgaattcagtcaataatgtatacaagtattcgctaaaattt atccacgcgaaatcttttgaaatcgtgatttgctaaaataaatccaaaaa aatcaagattttcctgactctctaatatacgctaaattagtctcgctaaa atttctacgaatAAAGTATGGTTTATTATAAAATTTAAGCTGACTTCGTT AATCCCTTAAACTTGTAATTTTAGGCGTCAAAGTTTGTTATAGTAGGGGG CAAACCCTTAGGACCCGTGATATCTTTTATGCAACGCAACCAAACCTGGT TCATTTCAAAGAAGAGCTCTTTCGCGAGggtttttctaggaaaattctTT AGGACTAAAAAAACTAACGTCACAGGCAAAACCCTTGACCtctaaaattt gacaaaatttcaaagaaataaaactcGAAACCACTTAAATCAATCGAAAG CGCTCATAAAACAATAAAGTAAAGGGGACTTTTAAGTGAACATAGTTTAT TTCCCAACGTAACTCGAGTAAATCGACGTAATCTTGACATTAATTTTCtc aagaaattgaatatatCCACTCAAAAGTCCTCTTTAGTTTACTTTATTGT TTTATGCGCGcttttgacgtcagtttttagATCTTTGAAATTTTCCGTGA GGATAAATTTCCAGCATTAGGcatattttcagaaaaaaattgaatatgag gGTTgcagaaataaatttttttgaaatttacctGCCGAAATCATGACTTT TGACCatcggacagcaggtctaaccccccggacaagcatcagttgacccc cggacattcaaaattaccctcaaacagagcgaTTTTACCCCCCAGACAAG GcaaatttgtagatttttcactaccccctggCACTATAACcccaccccca tgtacggatattttctggaagagcccaataaaagaaaatactttGTTAGG TTTTTAGGTAaagaaaaattgtcaaaagtACTGCTGGATTATGATCGCGT TGAGGAATATTCTGATGATGACGATTTTTTTACAGGTATGCAAAGCTGTC CTATGtcgttatttttcaaaataggaGTTCTCTTTTTTTATTCAGATCAA GCGCTCATGAAATCACGCCATCGCACAAACCATTTGGAGAAGACTTCTCA gcctcaaattttctttcattttcagtaatAGGTTTTAGCAATAATTAAAC CTTTGATTCAGTTTATTAAAGGTTTACTCGGAATgtgaaaaaataattga aatctaATCTATGTCGTAACGTATAGTGAATTTTCTCTTTTAGATACACT TGCAGCTGACACAAGGTAACATACATAATATTGCATTGATCATTTGTTGT CTCAAATCATTGGTAAcactcccagctggcacacaacgttgtttcaacgt ccatctaacgttatatggacggttggaacattagatggacgttgaaacaa cgttgtgtgccagctgggctgaCAGAAATATCACCCTTTCTCAATTAGCA TTTTCGTGTagttttcaaatcattttgttTCAGGGTTTACCCTCCGCAAA TCCGCCAATCCCCTCCCCCAAAATTTCCTTTACACGCCTGCTAAATGACA ACAAATATTCCGCTTCAAATCcattcaaattttcatcaaagtttacgatg aatatttcttcaaaaatcaacaaatttttaCTTAATTCCATCTTTTCAGG CTAAAACAGCCCGAATTTCTAGTGAACCTAAATTACGAATTTCTTTCAAT TGAAAAGAATGGCTGATTTAACTCCGTCAACCATGAAACCTTTTAGAAGA TTTGGAAAACGATTATTAGATAATTTCTCATTTTACACTTGTTTTGACAC CTTANGCTGATTTAACTCCGTCAACCATGAAACCTTTTAGAAGATTGGAA AAACGATTATTAGATAATTTCTCATGTTACATTTGTTTTCACACCTTGCA GCAGCGAACAACAACGATGGATACTTAATGTTGTTGCGTCGCCGAAATAT GGACCAATGGTGGATCGCCAAAGTAGGGTGGAGCCAAACCCACCGCAATA AAACACTAGTGGAATGTCATGAACTATGTGCTAAAGAAAGGTGTTCAACT TTGCAACATTCCAATTTTCGAAATTGTATTATAACACAAGTTAGACTATA CCATAACACTGCTAAGACATACCTTTCGAAGGGACTTGAAGAAATCATTT ATCTTTATTGATGATTTGATACTTTATTAtggtttaaaaattaaaatata tttttaggtttGCTTTATTATGGTGGTATTGTTGGAAACATTCTCAGAAC TCGAGCGACTccctacccagctggcacacaacgttcttttaacgtttatc taacgttcacaagaTCCATCTATccgttagatgaatgttgaaaaaacgtt gtgtgccagttgggtaGGTTGATGGCATCCACTatcggattcgtgctcct tatagagggcCACAGACTTATGGAATTACTCTCCCTCCTGAGGGATACTA CCtcgggttttgtagaggtctacgATTCAAGACTAGAGACTCTCATGTTT TTGGGAATATTATTTTCAGATCTTGGAATACACAAAAGTTCCTATcagca gattcatgtaaaaaaatcccgaaaaaatGTCGAGTGAATTCTAATTGGCT GAGACATGCAAAAATTACCTCATACTTTAGAGACATTGCTAAGGGTATAG TATATGTAGAGTATGTGGCCCCCACCTTATACGTCAATCAAATCTaaaag ttttctcaaatttagaggaaaagaagtttctcaaaaatttctcgagatat ctttaagatatgagtACAAAagtttgaccatagtttggaaatgtgattta gagggttttgtttataaatttgtttgataaaaaccTCCAAAACATAGGCG TGGTTAaattcaaattattaagcccagtgaaactgaaaatattaagcttt aaagttatttttctc

Coding sequence (CDS) from alignment at sc0000077:47168..57082+

>TCONS_00007443 ID=TCONS_00007443|Name=TCONS_00007443|organism=Clytia hemisphaerica|type=CDS|length=624bp|location=Sequence derived from alignment at sc0000077:47168..57082+ (Clytia hemisphaerica)
CTTTTTCCTGTTATCGATTTCGATTATGACTATATCGAGCTTTGTCATca
gttgtttttcaaattttcatcacGCTGCATTGTCCCATGTCCATTCAAAA
AATCTGACTATGGTTTGATATCGCCAAGAACGTTCCAAAATTTTGATGCT
CGAAAGACTAATTTTAAAGATGCAAGATATTTTTCACAATCTTTGGAATC
TTGCTTTCCTGATTTGACCGAAAGAGTTCGATTTTGCAACAAATTCTTTC
AATGCTTTTTGTGTTGGCAGCTGGTTGGAGGGAAAAATAGTGGTAAAACG
TCATGGTCAAAAGTGTTCTTTGGGTTGATGGCCAAAGAAAAAATTGCCGT
TCTTTCAAAGGAGGAGCATTTTGGAGCATCAATGATCCAAGACGACACTG
AGCTTCTTTGGGTAgatgaatggaaaaaaaaagaTGTTGTCGGAAGACAC
TTTGAAAACCAAGATGCAGGGTGGGTCCTTTTGCCAATCTGTCAAACACA
AAAACCCAAAAATGCAAAACATGCAGGCAGGAGTGTACATAACATGCAAC
AAAATACCAGATTACGGCAACaaacaagaaaatgtcaaaCTGCGCCTCTA
CATTTGTCgaacaaaaaaacttaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004199XLOC_004199Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007443-proteinTCONS_00007443-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007443-exon-sc0000077-1491911889:47168..48048TCONS_00007443-exon-sc0000077-1491911889:47168..48048Clytia hemisphaericaexon
TCONS_00007443-exon-sc0000077-1510915933:47168..48048TCONS_00007443-exon-sc0000077-1510915933:47168..48048Clytia hemisphaericaexon
TCONS_00007443-exon-sc0000077-1575043694:47168..48048TCONS_00007443-exon-sc0000077-1575043694:47168..48048Clytia hemisphaericaexon
TCONS_00007443-exon-sc0000077-1491911889:49051..49143TCONS_00007443-exon-sc0000077-1491911889:49051..49143Clytia hemisphaericaexon
TCONS_00007443-exon-sc0000077-1510915933:49051..49143TCONS_00007443-exon-sc0000077-1510915933:49051..49143Clytia hemisphaericaexon
TCONS_00007443-exon-sc0000077-1575043694:49051..49143TCONS_00007443-exon-sc0000077-1575043694:49051..49143Clytia hemisphaericaexon
TCONS_00007443-exon-sc0000077-1491911889:55075..55152TCONS_00007443-exon-sc0000077-1491911889:55075..55152Clytia hemisphaericaexon
TCONS_00007443-exon-sc0000077-1510915933:55075..55152TCONS_00007443-exon-sc0000077-1510915933:55075..55152Clytia hemisphaericaexon
TCONS_00007443-exon-sc0000077-1575043694:55075..55152TCONS_00007443-exon-sc0000077-1575043694:55075..55152Clytia hemisphaericaexon
TCONS_00007443-exon-sc0000077-1491911889:55411..55432TCONS_00007443-exon-sc0000077-1491911889:55411..55432Clytia hemisphaericaexon
TCONS_00007443-exon-sc0000077-1510915933:55411..55432TCONS_00007443-exon-sc0000077-1510915933:55411..55432Clytia hemisphaericaexon
TCONS_00007443-exon-sc0000077-1575043694:55411..55432TCONS_00007443-exon-sc0000077-1575043694:55411..55432Clytia hemisphaericaexon
TCONS_00007443-exon-sc0000077-1491911889:56069..56207TCONS_00007443-exon-sc0000077-1491911889:56069..56207Clytia hemisphaericaexon
TCONS_00007443-exon-sc0000077-1510915933:56069..56207TCONS_00007443-exon-sc0000077-1510915933:56069..56207Clytia hemisphaericaexon
TCONS_00007443-exon-sc0000077-1575043694:56069..56207TCONS_00007443-exon-sc0000077-1575043694:56069..56207Clytia hemisphaericaexon
TCONS_00007443-exon-sc0000077-1491911889:56375..57082TCONS_00007443-exon-sc0000077-1491911889:56375..57082Clytia hemisphaericaexon
TCONS_00007443-exon-sc0000077-1510915933:56375..57082TCONS_00007443-exon-sc0000077-1510915933:56375..57082Clytia hemisphaericaexon
TCONS_00007443-exon-sc0000077-1575043694:56375..57082TCONS_00007443-exon-sc0000077-1575043694:56375..57082Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000077supercontigsc0000077:47168..57082 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.363812 0.279986 0.119037 0.111726 3.99165e-08 4.65442e-09 1.53605 3.49453 1.03526 0.640118 1.62444 2.94917e-10 0 0.817028 0.0893171 0.191585 0.22402 0.211789 0.251555 0.432407 0.488953 0.482247 0.292928 0.427652 0 0.83067 0.126995 0.121005 0.0791422 0.0466575
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007443 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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