TCONS_00007482 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00007482
Unique Name	TCONS_00007482
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2044

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000077:71398..81935-
coding sequence from alignment at sc0000077:71398..81935-

transcript sequence

>TCONS_00007482 ID=TCONS_00007482|Name=TCONS_00007482|organism=Clytia hemisphaerica|type=transcript|length=2044bp
gcgcatttttacctaccgtttttacGGTCGAACACGGTGGAGAAAGCGAG
ACTCCTGTTTGATTGTGTATCAATTTATTTGTGAGCTCAATTCTTGCTCT
CCTTCTTTTCTAGAGAGACAACGACAACAACAAAATATTGTAAATAAACA
ATTAAAACTACACTCAtataaaaacaaacaacaacaacaacaacaacaac
aacaacaaacgaataaaataaaaacgaaaaatatggattctcaaaaaagt
AATAGTAACAATAACAGTGAGGACCGGATGGAACTTTGTAACGGACACTC
TAGAAAGCGGAAATGGGTTGTCCAATCATCGGACATGGCTAAACGGACCG
TCAATCCAATTCGTAGGATAGTGGATAATATGAAAATCGAACCTAATCCT
AATTTATCAACTATCTCACTCTCTATTGGCGACCCAACGATATTCGGTAA
CCTGCTACCACATCCCAATATATTAAAAGCCATCGAAGAAAGTCTACGCT
CGCATAAGAATAATGGATACGCCCCGGCAGTAGGTCAAACACAAGCAAGG
AAAGCAATCGCAGAATATATGTCTGTCCCTGGTGCACCACTTACGGAAAA
GGATATTATCATCACCTCCGCGTGTTCAGGAGCCATCGAGATTTGTCTGT
CAGCTCTGGCAAATGCTGGAGACAACATCGTTTGTCCTCGACCTGGTTTC
TCCTTATATCAAACAATTGGTGTTTCAAACGCTCTCGATGTCCGATTTTA
TAATTTACTCccTGAGAAAGAATGGGAAGTCGACCTGAACAATTTGGAAT
CACAAATCGATGAAAAAACGAAATGCATTCTGGTCACAAATCCATCAAAC
CCTTGCGGTTCAGTTTACTCGCGCAAACATCTTATTGATATCTTAGAAGt
tGCTGAAAGACACAAAATTCCGATATTAGCGGACGAAATTTACGCTTATT
CCgttttctcCGGAGAGACATTTTATCCCTTAGCAAGTTTGACCACGACC
GTACCTATTTTATCTTGTTGTGCAATTTCGAAAAGATTTTTAGTTCCTGG
TTGGAGGCTTGGTTGGATACAGATACACGATCGAAACGACGTTTTGGCAG
AGGTACGGAAAGGACTATATGACCTGGCGACTCGTATTTTGGGTGCAAAT
TCCGTCACGCAGGGAGCTTTACCAAAAATCTTATCTGAAACTCCGAAAGA
ATGGTTCGACGAAAATCTACGATATATCGAGGACAATGCTAAATTAGCGA
TGGATCGTTTGTCTAAAGTCAATGGTTTGGAACCTATTCAGCCACGTGGT
GCTATGTATATGATGGTTGGTATAGACACTGAAGTACTTGGCACCATTGA
GAGCGATATACATTTCACCGAACAATTACTTGCCAACAAATCAGTTTTCT
GTCTGCCCGGAACGTGTTTCAAATATCCAAACTTCTTCAGAATCGTTTTG
ACCGTGCCACCGCATATGATCCAAGAAGCGTGTAGCCGCATCAAAGAGTT
TTGTGAAGAAGTCATCGCTATCTCATAGTCGGGCGCCAATTGGGCGTTCA
ATGTGGGCGCCGGGCGTTGGTCGTTTAAGGCTCTCTGAGCTTTGGTACAA
CGGTACATAATTTTGAGATATGGGAAAGCGTGGCAAACGTTCCCTCAAAA
GTTTATTCTAGTAGGCTTTGAGAGAATATGATTTCTTAATACTTTTTATa
tagaaaagaaaatgttttctaaTCGCATCgcaatttctcaaattttattc
TCTGGaataattgattttgaaaattattattataaataGCCCAAAACGTC
TAAAGTTTTCGTTATTGTATCttagtaaaatgttgaaaatatgctaaaat
tttagttttaactGTGTTTTATATAATTTACCCCTCATGTATTTAATTgg
aatgacttttttttaatgacaagtttaatttttttttgttactgACTTTT
GTTATACTTAGCAATCTTTTTATTTATGAGgagaattttttatatttttt
tgaccAGAAAAAAGTAGTGATGTATATTTTTAGTGTAATTGAAC

Run BLAST on NCBI

protein sequence of TCONS_00007482-protein

>TCONS_00007482-protein ID=TCONS_00007482-protein|Name=TCONS_00007482-protein|organism=Clytia hemisphaerica|type=polypeptide|length=508bp
RIFTYRFYGRTRWRKRDSCLIVYQFICELNSCSPSFLERQRQQQNIVNKQ
LKLHSYKNKQQQQQQQQQQTNKIKTKNMDSQKSNSNNNSEDRMELCNGHS
RKRKWVVQSSDMAKRTVNPIRRIVDNMKIEPNPNLSTISLSIGDPTIFGN
LLPHPNILKAIEESLRSHKNNGYAPAVGQTQARKAIAEYMSVPGAPLTEK
DIIITSACSGAIEICLSALANAGDNIVCPRPGFSLYQTIGVSNALDVRFY
NLLPEKEWEVDLNNLESQIDEKTKCILVTNPSNPCGSVYSRKHLIDILEV
AERHKIPILADEIYAYSVFSGETFYPLASLTTTVPILSCCAISKRFLVPG
WRLGWIQIHDRNDVLAEVRKGLYDLATRILGANSVTQGALPKILSETPKE
WFDENLRYIEDNAKLAMDRLSKVNGLEPIQPRGAMYMMVGIDTEVLGTIE
SDIHFTEQLLANKSVFCLPGTCFKYPNFFRIVLTVPPHMIQEACSRIKEF
CEEVIAIS

Run BLAST on NCBI

transcript from alignment at sc0000077:71398..81935-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00007482 ID=TCONS_00007482|Name=TCONS_00007482|organism=Clytia hemisphaerica|type=transcript|length=10538bp|location=Sequence derived from alignment at sc0000077:71398..81935- (Clytia hemisphaerica)
GCGCATTTTTACCTACCGTTTTTACGGTCGAACACGGTGGAGAAAGCGAG
ACTCCTGTTTGATTGTGTATCAATTTATTTGTGAGCTCAATTCTTGCTCT
CCTTCTTTTCTAGAGAGACAACGACAACAACAAAATATTGTAAATAAACA
ATTAAAACTACACTCATATAAAAACAAACAACAACAACAACAACAACAAC
AACAACAAACGAATAAAATAAAAACGAAAAATATGGATTCTCAAAAAAGT
AATAGTAACAATAACAGTGAGGACCGGATGGAACTTTGTAACGGACACTC
TAGAAAGCGGAAATGGGTTGTCCAATCATCGGACATGGCTAAACGGACCG
TCAATCCAATTCGTAGGATAGTGGATAATATGAAAATCGAACCTAATCCT
AATTTATCAACTATCTCACTCTCTATTGGTATGTTTATAGTTGGAATTAT
CTTTCCAACGAGTTATAATTTGCACCTTAGCTCTAGTTTAGACGATCCAC
TTTTTGCCCTGCCTATTCTAATTGCTAATTAAAGTGGGCATAAAGTTGGA
TGTCTAAAGTCAATGCATTGTCCTCTTTTGACGTCAATGCAATGTCTTCT
TTCGACCCTTTTCGAGCAAAGATTTTAACTCCAATTTTGTGCCCATTTTT
TACCTGCTCAAACAATTAGAATAGGCAGGGTGAAAGGTAGGCCGTCTAAA
CTAGAGCTTATTCTCCTCAAAAGAAGAATGACATTGGTTTGAAAAACATT
CAACATTCGATATATGAGGCTTCCCCAGCGGTAACTCTAATCACGATATC
AATCACGAATTTTTTTGTCTTCAATCACCATTATGCAAATCAGCAAATAA
CTTGGATAATCACGTATCTCTTTGAACAAAGCCCAAATTACGCATCACGG
CTCATAAATTTCAAATCAAGATCACGTGTTGACCTCTAATCTTGCAATCA
CAAAAAAGATTTTTCAAATCATGTAATCACGCTCGAAAGAAAGTCCCTAT
CACGACATCACGCAAACCGCTTGGGGCCTCATATATTGTACAAACCGAAG
ATTTGACTTACAAAGATTCTCTCTTTTCACATGCAGCGCGCACGTGCATG
ATCTTTTAGATATGTTTTTCTCAATCTTGTACCCAGAGCCCTCGCTCTGC
ATCACTTCTTTAATTCTACTGATGGACTTGATATAATTCAACCTTTCGTG
AGCGCTATCAGAATCTCAGAATCATAAAAAAGCGAACTAAGGGACTGGGT
CCAAGTTTGGTTTTTAATTGCTATAGAGTGCGGAACCCAGTTGGAGTGAG
TCAAATTTACGCCAAATGGGTTATCACGCAAACTGGGTTCCGCACTCTAC
ATGAAGATGAGTTTTCTGAAAATCGCCGCTGATAAAATAAATCGATTTCC
TTTCATTTTAAGGCGACCCAACGATATTCGGTAACCTGCTACCACATCCC
AATATATTAAAAGCCATCGAAGAAAGTCTACGCTCGCATAAGAATAATGG
ATACGCCCCGGCAGTAGGTGAGTCCTCTTATTATAATTATTTAAAGTCTA
TTCACGATAAGTGTGCACTCTTTTTCCATTTACCTATAACTTTTGAAGAA
ATTCTTCAATCTTTATAAATTTGGCATCATTGGAAAGATATTAGTGAGTG
GAACAATTTAAAATAAAAAAAACTTTAAAAAGATTATAAAAATGAAGATG
AAAATGAAAAAGAAAAAAATGAAGTTCTTGTAGAAAAGTGCTATAACTAT
CATTTTCACAGAAGTAAATCCTTAATCATCGAACGTCATCACTGTGAAAA
AAATTCTCAAAAATAATCATTCAGTCAAAAGATATCAAACAAAGTTATAA
GCTGATTGACGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCATTTTTTACTT
CTTCATTTTCATCTTCATTTTTAGAATTTTTTTAAAGATTTTTTTATTTC
AAATTGTTCCACTCACTAATATCTCTCCAATGATACCAAATTTATAAAGA
TTGAAGAATCCCTTCAAAAGTTATAGGTAAAAGAAAAAAGAGTGCACACT
TATCGTGAATAGACTTTAATTTTATATACACTAAGTAGAAGCCTTATGGA
GATAACCAATATGGAATATTTGGCATGAAAATTTCGTCTATGGTCTTGAT
CCTAATTCTTTTGTCTAAGTATGTTTGAAAATCAGAATTTGTCAAAATGG
GTTCCTAGACATATACAGAAGCAAAACAATCATTCAAATTAGAGATTAGA
ATTAGAGAAAGATTCGAATTACAGAGGCCACCTTTCAGCTGAGGGGACCA
GTATTTATTTCGAATTATCGAAATATTTGAATAATAAAGATTCGAATTGG
AGAGACTCGAATTGGAGAGACTTGTAATTTGAATATCTCTACTTTGGAGG
TTTAGCTCATTTCCATAAGAGGAATCCACAGCGGAAGATTTCAAAGCATT
TGATTATCTCTTTAAGATTACAAGTTGCAAGTATCGGAGTCTGTTGTGTA
GGTGAGCTCAAACTTATAATTCGAGATTTTTTACATCCAAAAAGATTAAC
ACGCTTAACTTCCGTATGTTAGGTCAAACACAAGCAAGGAAAGCAATCGC
AGAATATATGTCTGTCCCTGGTGCACCACTTACGGAAAAGGTATCATTTA
ATAGACATTAATTTTTTAGTTTTTTGGATTTTAAACATTGCAAATCTTTT
AGGCGAGAAACGAAAAAACTGCGGATGGTGGTGCACTCAAAGTAGGCGGA
CCCTAAGGGTTCGTTTTTAGGCTTTCCAAAGTGCACGTTGTGGAAAGGGT
TGTAATTCGAGAATATTTCACTATATTTTCTAGAACGGACCAAAAAAACT
CAAAGCGTAAAATATTATTGTTTAAACTTTTGTGTCTTTAATGTTTTAAA
GGATATTATCATCACCTCCGCGTGTTCAGGAGCCATCGAGATTTGTCTGT
CAGCTCTGGCAAATGCTGGAGACAACATCGTTTGTCCTCGACCTGGTTTC
TCCTTATATCAAACAATTGGTGTTTCAAACGCTCTCGATGTCCGNCGACC
TGGTTTTTCCTTATATCAAACAATTGGTGTTTCAAATGCTCTCGATGTCC
GATTTTATAATTTACTCGTAAGTATAAAGTGTTGTTTTTTTCTAATATGA
ATTGCAGTTTTGTTGAACAGACATTTACTTATGATCGGGCTGTGTTAAAT
CCGGTAGATTTTAAAGGAAATCAAAAACAAGAATGACTCTAATGGGGATA
GAGCACTAACCTCTATATTTATGCACTTCTTTTATTGAAACCCATTTTAC
AGGATTACGGGATAAAAAAGCGTTTAGGGGGTCGCAGCGAGTCTGTGGCA
CAGAGGTGTTAAAAGGCACAACAGTTATTGTCAATAAACATTTACTAAAA
ATGCAGTAGTGTAGTGGTTATCAATCTTGACTACCGTCCAGGAGGTCAGG
GTTCGATTCCCGTTCGGTGCTGTGATTCACTTGGCCAACCCATGCCATGT
GAGAGGAAATTGGTAGACAGAAACTCAAGAAGCCTGTCGGTGATTGTGCT
AGGAATCGATTCCACAATACATCGTGGATGAGGTGAGAGTGCGCTGACCT
AGTTCCCTAGTGGTTCACGCCGGATTAACGCATTTGATCCGAAAAAAACT
GTGTGGCAGTATAAACGACAGCGTAAGAAGGTTCTAACGAGACGACTCTT
ATACCACTCAATACAGAACCGAACATCCTCTGTAAGGAAAAAGCCAGTCA
TGACTAAAACTGCATTGAATAGGGCTTACCTATGTAATTATCAAGTACAT
ACAATTTAAACAATTTTCTTTTTAGCCTGAGAAAGAATGGGAAGTCGACC
TGAACAATTTGGAATCACAAATCGATGAAAAAACGAAATGCATTCTGGTC
ACAAATCCATCAAACCCTTGCGGTTCAGTTTACTCGCGCAAACATCTTAT
TGATATCTTAGAAGGTATGACAGTTACAGTTGACGAGTCTCTATAACTCG
AATATCGACAAGTAACGAAAATTTGTTCGAGATATAGAGATTAAAGATAT
ATAAAGACTCGTCTGTATTTGTTTTGATTTTTTTTACATAATTTACGTTG
TTTAATTTTTTGCATGATTTTGGTATTTTATAAGCAAATGCGTGTTACAA
ATAAATATTTGAACAATTATTCTCTAGTTCGATCTTCAAGGGGCCGTCAA
TTTTCTTCGAATTAGAGAAAGATTCGAATTATGGAGGCTTGAACTAGAAA
ACTTTGACTGCTTTCTACTGTAAAATATGTTTTAGACTCGTTGTACTGAA
TTCGTAATTTTTATATTTTAGTTGCTGAAAGACACAAAATTCCGATATTA
GCGGACGAAATTTACGCTTATTCCGTAAGTTAGTACTAACGACTGCATCG
TTTCGAAACCATTGCCAAGGTGATTAAATCCCTTGAGTCTTCAAGTGTTA
CTTGTATAAACTAAACTTTTTATGAACTCCTCTTGAAATCAATTACTATA
GCAATATTTTGAAAACGAGTTAAGAGTTTCTCGCGACATAATTTATGAAA
ATGTTGTTTCACTTCTGGCTAAGCCGATCCAAAAAAAAGGAAAAATTTTA
AAAACGTTAAAATGTTAAAATCTAAATTTCGTCCAAACTATTTCTTTTTT
TAGGTTTTCTCCGGAGAGACATTTTATCCCTTAGCAAGTTTGACCACGAC
CGTACCTATTTTATCTTGTTGTGCAATTTCGAAAAGGTATGGTAGTATAG
TATGTATAAAACACCCCTGTGTCCCAGACTCTCTGGGACACCCCCCATCA
CTGGGAAATTAGGCAAAAATTTCGTCCCCGGTGGAAATAAATACCCTGCA
ATTTTACCTTACCACTGGGAAATAGACTTGATTTCATCCCCATTCGAAAT
TCAAATGTAAAAAAATTGCAATCCAAAAAACCATCCCCACTGGATTTTTT
GAGCTTGGAACAACAGAACTTCTATCTTCACTGGGGTTTCGATGGAGATT
TCTATCTCCACTGCTGTGAGACAGGGGTGTTATATAAATAAAATAAAATT
TAAAGCCCCANATCACTGGGAAATTAGACAAAAATTTCGTCCCCGGTGGA
AAAAAATACCCTGCAATTTTATCTTACCACTGGGAAATAGACTTTGATTT
GGGATGACCCTATTCGAAATTCAAATTAAAAAAAATTGCAATCCAAAAAA
CCATCCCCACTGGATTTTTTGAGCTCGGAACAACAGAACTTCTATCTTCA
CTGGGGTTTCGATGGAGATTTCTATCTCCACTGATGTGAGACAGGGGTGT
TATAAAGACAATAAGATTTAAAGCCCCATCCAAAAAAGCAACATATCAGA
CACAGGGGTATTCCGTAGGCTGACACGTACATATCATTACTGATTGAAGG
CATCTGGTATAACCGAAGAATATTTTGTATAATTGTTTAAATTCATTTTA
GATTCAAATTATTGTATTATTTCCTTTCAGATTTTTAGTTCCTGGTTGGA
GGCTTGGTTGGATACAGATACACGATCGAAACGACGTTTTGGCAGAGGTA
TGTTTAACAAAAACGAAAGTGAAAGTAAAACCAATTTGAATGATGCAAAT
CTAATTTATTTCTTCTTCAGGAAGGGAAGAAAAGATTTTTGACACCCCTG
GCTAGCGGGAAATAGTTGATCCCGGGGAAACTAAATTTGTGTCTGCAAGG
GAGCTCGTAACAAACGTTTTTATACAATGGTATCTTATTTAGGATTAGAT
GCTTTTGGCTCTAGAGAGAAACTTCTTTCTTTTACCTTGACTGTTCTGAG
GGCTTGATCTTCAAAATTCTTTTATCTAGGACATTCTTAAAACATCCTAC
AGCTACTATTTAATTTCGAAAATCCCACCCCTCGTCTTGGTACCCGAAAG
TAATATCCAGCGTACAATCAAAGCCACAATATTTGGTAAAAAGGGGAATT
CTTTGCAACATTTTAAAAACCAAAATTTACTATGAGATCTAAACACTCAA
AATATTTCGAAGTTGATTGAATAATATTTCGGCCCAAAGTACCTTATCGG
GGTAAACTTCGTCGGGGAAAAGTGACGAAATTTTGGCCAAGTGGCGAATA
TTTTTCCCCGACGAAAATTTTCCCCGGCCTTAATGCGTTTACCAACTACC
AGTAAGTGACGAATATTTTTCCCCGACGAAAATTTTCCCCGACGAAGTTT
TCCCCAATAAGGTATTTCTTGATTCTCTGCAGGTACGGAAAGGACTATAT
GACCTGGCGACTCGTATTTTGGGTGCAAATTCCGTCACGCAGGGAGCTTT
ACCAAAAATCTTATCTGAAACTCCGAAAGAATGGTTCGACGAAAATCTAC
GATATATCGAGGTATGTTTATCTTTCTTTTTTACTTAACAGAAAAATCAA
ACTTTCACCACACCAGGACCTTTTAGGTGGATGCGTGGTGTAGGTCAATT
CAAATTAAAATTGAATTTCTGAAACAGAAAAACAACAAGCTTGTTTTACT
TTTCACAGGACTCTTTTCTGCTATACTGTTGGCGAGGGAGCCAGATAACA
CCTATAATTGCTTTCTCAAGTTTTCTAAGCCAATCAAAATACGTCTGTCT
CTCCTAGCGACCGAACCCGTTGCTAAAGCCATCACAATCATAAAAATCAG
AAAGATTGGATTAAGTAAAACGGGTTTTTATCGCCAGGTTTAAGGGCTAA
TGTTTCTATTTCGAAAACAGAAAAACAACAAGCTTGTCTTTTACTTTTCA
CAGGACAATGCTAAATTAGCGATGGATCGTTTGTCTAAAGTCAATGGTTT
GGAACCTATTCAGCCACGTGGTGCTATGTATATGATGGTAAGATAACATT
GATTTTAAAACCCTGAAGGGACACTTATTTCCCATCCATAACACGTGGTT
CTCGCACAAACAACGGATTGAAAGTAAATCCTACCGTCCGATTTCGAAAA
ATATGCCGCTCAATAACAAAGAAAAAACAGCTAAATTATATAATTCTCAG
AATTCTGTTATCTACTTTTACAAAAAACCTTAAGGCTTGTTCTTGCTTGA
GTTTGAAGATTCTTATCTCTAGCCAGTACTCTACTCTTTAGCTCCCAAAC
TCGGTGTGGTAAGATAACATTAACCTAATTCTGTAGAATAAAAACGGTCA
GATTTTGCTCATTGTTGCCCCATTTTTTGCCCTTACTTTTTTTGGAACTA
CAGTGTGTCCCAAAAAAAGCGTACAAAATTTTATAAGGAATCAATTCTCA
AAACTCATCATCTTAACTGGGCTTATTGAAAAAAAGATCATTAAAATTTT
CTGTTCAATCAATCGATATTCAATTCCCAAAATGATTGAATAGGTTTTGG
AGATTGAAATATTACAAGCCATTGAAATTTCGTATAAATCATGAGGATTT
TACTTTATATAAACAATTGTCCGCTTTTTTTGGAACACACTGTATGTGTA
TGTGAAGAAAAAAGAATTTCTGTCCAACTATATTTACTCAGGAGATTTCG
GTGGCAGGGCAGTATATGCATTTTGTCCTTATTAGGACTCGTCAGCACTG
GCCGGATCGATTTAGCCAGCATCTCTAAAATCAATTGTGGTTCAAACTGA
AAGAAATAGTGGACGGAAGGGAAATTCCCTAATAATTCTTCTAAGCTACT
AAAATTTGTCTTTCATCATTTGTAGGTTGGTATAGACACTGAAGTACTTG
GCACCATTGAGAGCGATATACATTTCACCGAACAATTACTTGCCAACAAA
TCAGTTTTCTGTCTGCCCGGAACGGTAAGAGCGAGTTATAGAGTGCCTAA
CTGGACAGCTATTTTGGCGACATGTCAACTTTGCTTTATATCATCTCCTT
CGATTACATAAACTCGCTATAGAGTGCTTAACCAGGAATTTGGGAAAAAA
GGATGGTGACATATCAACTTTGCTTTATACCATCTCCTTCGATTACATAA
ACTCGCTATAGAGTGCCTAACCAGGAATTTGGAAAAAAAGGATGGTGACA
TGTCAACTTTGCTTAATGCCATCTCCTTCGATTTACCTCAAATACATAAA
CTCGCTATAGAGTGCCTAACTGAGCTCTTACACATAAACAATAAACTTTT
GCATAATGTTATTTATGGAAAGAATGATCATTGGTCTTTCTTAGGCCTGG
CGAACGGCGAATTTCGCCGCTTTAAGACACGAAAAAAAATTACAATTCGC
CGGTATAAAAATTCGGTTCGCCGCCTCAAGCACATATTCAAACTAACTTA
CTTAAGTAGAGCTTGTTACATAAAGTTATAGATTATAATGATTATAGTGA
AAGTTACAATTTCTAATCAACTGATGAATGCGTAAGCAAGAAACTTTTGT
ATTGAGAAGAAATACACCGTTTCTTAATCTTTATGTATCCACGCTAATCA
ATGCAATCCCAGCTGGCACACAACGTTGTTTCAACGTTTATTTAACGTTC
ACAACGTCCATATAACGTTAAATGAACGTTGAAACAACGTTGTGTGCCAG
CACAACGTTGTTTCAACGTTCATTTAACATTATATGGACGTTGTGAACGG
TAAATAAACGTTGAAACAACGTTGTGCTGGCACACAACGTTGTTTCAACG
TTTATTTAACGTTCACAACGTCCATATAACGTTAAATGAACGTTGAAACA
ACGTTGTGTGCCAGCTGGGAAATTAGGTCTAATAAGAATTCGCCGGCCTA
GAATCTAGAATTCGCTGGGGTTAATTTTTCATTCGCCAACCTATCAAAAA
CATAGCAAAACCTTTGAATGATGAAAACATACCATCATTGACCAAGATAC
TCATACTAGCAAGTTTTTCTCTACACCGTTTTGAGGACGGAGGAACATTT
GATTCTAAATGTGGTTGAGGAAGCTTTACGCCTGTCTCGTTAGCAATGTT
GGTATTGTAGGTCCCACATATGATGTAGTATCTTAACTTTCATTTTAAAA
TCAGCAAACAATTGGTGTTTTGAAACAAAAAATATCTAACTTTGCAAGGA
TGGGAATCGTGGTAACTGTTTGCCGAATTTGATCTGTTTCAACAGGAAAT
AAAAGGTTGATTTACTGTCGTCCTCAGTCAGTCAGGATTTAAATAGATTA
TGAAAGCAGCCTACCATTTCCGCTTGAGAAAACACATCATTACATAAACT
CGGTACCTTATACACCTTTTCGACTGTAGTCGCGTGGTCAGGCGCGTGCC
ACTTTATTATTTGTATTAAATTTTATATTAATAAATTGGCGGCTACGGTC
GAAAAGGTGTATTCTCAATGAAGTAGAAGCCGCAGGCTAGAAGTCAATCT
CGTTGGTAGGATTTAAAACCAACAAATCCTACCAAAGTTGCGCGGCCTTG
AGCGACTCGCCTGGTTTTTACACAAATGACAGATTGAAACTAAAATTTAC
CACTAAATTTCGAAAATAATATCAATCGTAAACAAAGGATTTGCTAGATT
CAATCTGTCGTCAAAAATACGGCGCATTTTTTAAGGCTTCACTTTTTCTT
CCCTGAGAAAGGTTAGAGATTCTACTCTAGCCCTTCGGGCTTTAAACTCA
ATGTGTATTCTACACCAGCGAACTTTTTTCATTAATTCAAACAATTTCTT
TCTTTCAGTGTTTCAAATATCCAAACTTCTTCAGAATCGTTTTGACCGTG
CCACCGCATATGATCCAAGAAGCGTGTAGCCGCATCAAAGAGTTTTGTGA
AGAAGTCATCGCTATCTCATAGTCGGGCGCCAATTGGGCGTTCAATGTGG
GCGCCGGGCGTTGGTCGTTTAAGGCTCTCTGAGCTTTGGTACAACGGTAC
ATAATTTTGAGATATGGGAAAGCGTGGCAAACGTTCCCTCAAAAGTTTAT
TCTAGTAGGCTTTGAGAGAATATGATTTCTTAATACTTTTTATATAGAAA
AGAAAATGTTTTCTAATCGCATCGCAATTTCTCAAATTTTATTCTCTGGA
ATAATTGATTTTGAAAATTATTATTATAAATAGCCCAAAACGTCTAAAGT
TTTCGTTATTGTATCTTAGTAAAATGTTGAAAATATGCTAAAATTTTAGT
TTTAACTGTGTTTTATATAATTTACCCCTCATGTATTTAATTGGAATGAC
TTTTTTTTAATGACAAGTTTAATTTTTTTTTGTTACTGACTTTTGTTATA
CTTAGCAATCTTTTTATTTATGAGGAGAATTTTTTATATTTTTTTGACCA
GAAAAAAGTAGTGATGTATATTTTTAGTGTAATTGAAC

Coding sequence (CDS) from alignment at sc0000077:71398..81935-

>TCONS_00007482 ID=TCONS_00007482|Name=TCONS_00007482|organism=Clytia hemisphaerica|type=CDS|length=1527bp|location=Sequence derived from alignment at sc0000077:71398..81935- (Clytia hemisphaerica)
CGCATTTTTACCTACCGTTTTTACGGTCGAACACGGTGGAGAAAGCGAGA
CTCCTGTTTGATTGTGTATCAATTTATTTGTGAGCTCAATTCTTGCTCTC
CTTCTTTTCTAGAGAGACAACGACAACAACAAAATATTGTAAATAAACAA
TTAAAACTACACTCATATAAAAACAAACAACAACAACAACAACAACAACA
ACAACAAACGAATAAAATAAAAACGAAAAATATGGATTCTCAAAAAAGTA
ATAGTAACAATAACAGTGAGGACCGGATGGAACTTTGTAACGGACACTCT
AGAAAGCGGAAATGGGTTGTCCAATCATCGGACATGGCTAAACGGACCGT
CAATCCAATTCGTAGGATAGTGGATAATATGAAAATCGAACCTAATCCTA
ATTTATCAACTATCTCACTCTCTATTGGCGACCCAACGATATTCGGTAAC
CTGCTACCACATCCCAATATATTAAAAGCCATCGAAGAAAGTCTACGCTC
GCATAAGAATAATGGATACGCCCCGGCAGTAGGTCAAACACAAGCAAGGA
AAGCAATCGCAGAATATATGTCTGTCCCTGGTGCACCACTTACGGAAAAG
GATATTATCATCACCTCCGCGTGTTCAGGAGCCATCGAGATTTGTCTGTC
AGCTCTGGCAAATGCTGGAGACAACATCGTTTGTCCTCGACCTGGTTTCT
CCTTATATCAAACAATTGGTGTTTCAAACGCTCTCGATGTCCGATTTTAT
AATTTACTCCCTGAGAAAGAATGGGAAGTCGACCTGAACAATTTGGAATC
ACAAATCGATGAAAAAACGAAATGCATTCTGGTCACAAATCCATCAAACC
CTTGCGGTTCAGTTTACTCGCGCAAACATCTTATTGATATCTTAGAAGTT
GCTGAAAGACACAAAATTCCGATATTAGCGGACGAAATTTACGCTTATTC
CGTTTTCTCCGGAGAGACATTTTATCCCTTAGCAAGTTTGACCACGACCG
TACCTATTTTATCTTGTTGTGCAATTTCGAAAAGATTTTTAGTTCCTGGT
TGGAGGCTTGGTTGGATACAGATACACGATCGAAACGACGTTTTGGCAGA
GGTACGGAAAGGACTATATGACCTGGCGACTCGTATTTTGGGTGCAAATT
CCGTCACGCAGGGAGCTTTACCAAAAATCTTATCTGAAACTCCGAAAGAA
TGGTTCGACGAAAATCTACGATATATCGAGGACAATGCTAAATTAGCGAT
GGATCGTTTGTCTAAAGTCAATGGTTTGGAACCTATTCAGCCACGTGGTG
CTATGTATATGATGGTTGGTATAGACACTGAAGTACTTGGCACCATTGAG
AGCGATATACATTTCACCGAACAATTACTTGCCAACAAATCAGTTTTCTG
TCTGCCCGGAACGTGTTTCAAATATCCAAACTTCTTCAGAATCGTTTTGA
CCGTGCCACCGCATATGATCCAAGAAGCGTGTAGCCGCATCAAAGAGTTT
TGTGAAGAAGTCATCGCTATCTCATAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_004218	XLOC_004218	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00007482-protein	TCONS_00007482-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000077	supercontig	sc0000077:71398..81935 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.88932	7.8054	6.39213	6.61779	43.0463	35.2726	68.9031	81.2843	46.5146	59.4523	39.5283	42.878	21.4944	22.3004	15.765	9.00327	27.2898	22.7458	21.9499	26.9679	30.1177	30.9269	24.0619	29.6186	35.4339	34.7918	67.2491	44.533	3.12067	5.32644

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR015422	PyrdxlP-dep_Trfase_sub2
IPR015421	PyrdxlP-dep_Trfase_major_sub1
IPR005958	TyrNic_aminoTrfase
IPR005957	Tyrosine_aminoTrfase
IPR004839	Aminotransferase_I/II
IPR015424	PyrdxlP-dep_Trfase

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity
GO:0008483	transaminase activity
GO:0030170	pyridoxal phosphate binding
GO:0004838	L-tyrosine:2-oxoglutarate aminotransferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006520	cellular amino acid metabolic process
GO:0009072	aromatic amino acid family metabolic process
GO:0009058	biosynthetic process

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009072	aromatic amino acid family metabolic process
biological_process	GO:0009058	biosynthetic process
biological_process	GO:0006520	cellular amino acid metabolic process
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0004838	L-tyrosine:2-oxoglutarate aminotransferase activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0008483	transaminase activity

Blast

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BLAST of TCONS_00007482 vs. Swiss-Prot (Human)
Match: ATTY (Tyrosine aminotransferase OS=Homo sapiens GN=TAT PE=1 SV=1)

HSP 1 Score: 493.812 bits (1270), Expect = 3.630e-168
Identity = 231/405 (57.04%), Postives = 299/405 (73.83%), Query Frame = 2

Query:  299 SRKRKWVVQSSDMAKRTVNPIRRIVDNMKIEPNPNLSTISLSIGDPTIFGNLLPHPNILKAIEESLRSHKNNGYAPAVGQTQARKAIAEYMSVPGAPLTEKDIIITSACSGAIEICLSALANAGDNIVCPRPGFSLYQTIGVSNALDVRFYNLLPEKEWEVDLNNLESQIDEKTKCILVTNPSNPCGSVYSRKHLIDILEVAERHKIPILADEIYAYSVFSGETFYPLASLTTTVPILSCCAISKRFLVPGWRLGWIQIHDRNDVLA-EVRKGLYDLATRILGANSVTQGALPKILSETPKEWFDENLRYIEDNAKLAMDRLSKVNGLEPIQPRGAMYMMVGIDTEVLGTIESDIHFTEQLLANKSVFCLPGTCFKYPNFFRIVLTVPPHMIQEACSRIKEFCEE 1510
             RK +W V+ SDMAK+T NPIR IVDNMK++PNPN + ISLSIGDPT+FGNL   P + +A++++L S K NGYAP++G   +R+ IA Y   P APL  KD+I+TS CS AI++CL+ LAN G NI+ PRPGFSLY+T+  S  ++V+ YNLLPEK WE+DL  LE  IDEKT C++V NPSNPCGSV+S++HL  IL VA R  +PILADEIY   VFS   + PLA+L+T VPILSC  ++KR+LVPGWRLGWI IHDR D+   E+R GL  L+ RILG  ++ QGAL  IL  TP E++   L +++ NA L    L+ + GL P++P GAMY+MVGI+ E     E+D+ FTE+L+A +SV CLP TCF+YPNF R+V+TVP  M+ EACSRI+EFCE+
Sbjct:   36 GRKARWSVRPSDMAKKTFNPIRAIVDNMKVKPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCPEAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVPEVMMLEACSRIQEFCEQ 440

The following BLAST results are available for this feature:

BLAST of TCONS_00007482 vs. Swiss-Prot (Human)

BLAST of TCONS_00007482 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ATTY	3.630e-168	57.04	Tyrosine aminotransferase OS=Homo sapiens GN=TAT P...	[more]

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TCONS_00007482 (transcript) - C. hemisphaerica