TCONS_00007488 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007488
Unique NameTCONS_00007488
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2857

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007488 ID=TCONS_00007488|Name=TCONS_00007488|organism=Clytia hemisphaerica|type=transcript|length=2857bp
AGAGCCAGTAAAGTTAGatttcaaaaacatcaaaattatagATGGCTTTG
CTCTTGATGGAAGAGCTATGGAAAAAGGAAATGTGATCGTTTCGTCCACA
TATCAAGAagactttcaaaatattcacaTGCTACCACCATTGTTcgattt
tcagcctcaaagaTTCGACGATGATAAAGaaaaacttcCACAACGATGCT
TCCCGTTTTCCCAGCCAATAGTTCCGCATCGTAAGCGAGATAGTGAGATT
CCCATTGCACCTGGCTTCAGTACTTTCTTACACAGAGTATCGAGAACGAA
CAAAGACAACTTCTTAAAACCAATTCTTAAAAAAGAGACCCATTCTTCTT
CATCGGCATCGCAAAAGCGAAATTCAACAGAAAATAAATCTGATAAAGAG
AGTGATTCACTGTCGACTTTTCGTTGCCAAAATCTTGAATCAAGATCGGT
ATTTGTGTCACGAAAACTTGAATCAAAGCCAGCTTCTGAATGCCCAAGTC
CTGTTTTGAAGTCAACGTCATCTTGCTTGAGAACTGGACCTTCTTCGTGC
CTCGGGAGTAGTGCACAGGCGTCTGCGCGCCAAACTCCTAATTGTACAAC
TCCATCATCAGCAAGTAAACACGCAGAGCGACAAGCTACCGGAGGAAAAA
CTACACTTGTGCCAGAGTTAGTTCTACAAGAACTCGTAAAGCTCGGTCAC
TATACACCATCGTCTCAAAACAATTCATGTTTCATACGAAAACCCAAACA
AGAAAGACTTCTCACTCCTGAAATGAGACGAGAATTTTGGCGTAAGAATC
CACATCGTGATGGAATCATCAACTCTGGTCGTGTTCTCGGTCAATCACAG
AATAAACCAGAAATCTGGCAAACTGTTGGTTGCATGTGGGACAAACTTCA
AGATAGAAAACCAATTGCTCCGAGCATGCGAGCAGTGCAACAGGACACAC
AAAGATTATTAAGTCGTCCTCGTGTCGGCGAAGAAAATAAGAATTTCAAC
ACTTTTGGTTACACCAATATGCTCTCTTCTAACATTCCTGGGTACAGTGG
TTGCCGACCTCAATTATTACCGAATCGTACAAAAGCACAAACGTGTGGCT
TTCAATCCATCTCCAGACTCACCTACAGGGAGCATCCAAAAGTGACGTAT
CGACTACCTTCGTACGGCCACCGAGCGCCAATGTCAAGAACTGTCACACT
GACTGAACCTTACAATCCGTTCAATAAAGTTGAACCAGAACTTCTCGTCA
TTTAAAACAATCTAAAATCTTATGTTTATACTCGATAAAATATTTTccga
aatttaaaattcaatgtttaaaattacactccaaaaccatccccacttgA
ACCTTGGAACAagggaatttctatccccatcgggattttcaataggaatt
ttatCCCAAGGGAGGGGGCACTTAGGCAGAATTAGGTACGGGAACGTGCT
GCTGATCAGGGTCTCTTTTAGACTCTagagatatctgacagggtcccaaa
tttaataattttcaagatgtggaTCCATCAATCTGACAAGGtcgattttt
ggtcattttggacaattttcagggttaaaataggaaattttttgttctaa
agggtcccaaatttaccaaaagaaagtcagtgcccccccccggttTTATC
CGAAccaaggaaaaaagttccaccggtgcgtaaaaatggaaaattagAGA
TAACGAAGATAAACAAAAATGTGAAAGTGCAGTGTAATGGAgtgaataaa
aaagtttgaaaatacaAACGTGCTCTAAAATACTAATTTTGAACAAATTC
AATTCTAAATGTGGCATACTCAGCTAAAGAAAGGTCCTAAATACCCTGTC
TATTCTatttgtgaattaaagtgggcataAAGTTGGCAGTCTAATGCATT
GCTCTCTATTGACATCAATGCAAGGCcatctttcaatctttttcaagcaa
agattttaactgtcCACTcaaacaattagaatagacagggcaAAAAGTCG
GCCGactaaactagagctaaattTCTTCACTCCTACATATCATTTTAGCT
GAGAACAGGGATATGAACTTATTTAGGGGCTCGACAAGGGGGACGACAGG
CAAGAATAACacaataattaaaattttatctgACTATTATATGTTATATT
AATAAcgattattttttttacttctcgtaAATTCAATATATACATATATG
CAAACTAATAGTGATTGCCGGctattaaaaatgaagaaaaaataacgATA
TTCTCACAAAGTACacatctttttataagaacatccaaattttttgaagc
tttcggatgttcttaactttttgagttttaagcctaaaaatgttcttatt
ttcactattttgtgagtatttttgtccattttcctaagaaattgggtgtt
ttagagtccgcgaagcaTTAAAATGTACttcttgttcttaatatttttta
tatcgaagcctcatgttcttataaaaaaaacgtgtacgccATTTCTTGAG
AAAGCTTAAAACAACGACCACTTCATATAAAAAAAGGCCGAGAGAATTGA
GCTCGGGTACCTGCTAGATGTATTGATGACGTTCCTGGAAAGTTCCGATT
ATTTTCTTAACTATTGTGATTACATTTAGAACAATCTGCATCTTTGACTA
TTTCAAAAGCGAATTTCGAATCGTATATCAAATAACAAAGCATATAATAT
TTTAATAATCTTTTCAAATCCTTGTATTCTTCTCTTGCAGAGCCCCCTCC
CAGCGGTTTACGTGATGGAATGATCGAGTTGATGGCTTGATGCCATGATT
TATGATTTCAAAAAGCCTAATGCGTGATGGACAGTAATAAGACTTTTTTA
AATCCGC
Run BLAST on NCBI

protein sequence of TCONS_00007488-protein

>TCONS_00007488-protein ID=TCONS_00007488-protein|Name=TCONS_00007488-protein|organism=Clytia hemisphaerica|type=polypeptide|length=417bp
EPVKLDFKNIKIIDGFALDGRAMEKGNVIVSSTYQEDFQNIHMLPPLFDF
QPQRFDDDKEKLPQRCFPFSQPIVPHRKRDSEIPIAPGFSTFLHRVSRTN
KDNFLKPILKKETHSSSSASQKRNSTENKSDKESDSLSTFRCQNLESRSV
FVSRKLESKPASECPSPVLKSTSSCLRTGPSSCLGSSAQASARQTPNCTT
PSSASKHAERQATGGKTTLVPELVLQELVKLGHYTPSSQNNSCFIRKPKQ
ERLLTPEMRREFWRKNPHRDGIINSGRVLGQSQNKPEIWQTVGCMWDKLQ
DRKPIAPSMRAVQQDTQRLLSRPRVGEENKNFNTFGYTNMLSSNIPGYSG
CRPQLLPNRTKAQTCGFQSISRLTYREHPKVTYRLPSYGHRAPMSRTVTL
TEPYNPFNKVEPELLVI
Run BLAST on NCBI

transcript from alignment at sc0000077:326158..333211-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007488 ID=TCONS_00007488|Name=TCONS_00007488|organism=Clytia hemisphaerica|type=transcript|length=7054bp|location=Sequence derived from alignment at sc0000077:326158..333211- (Clytia hemisphaerica)
AGAGCCAGTAAAGTTAGATTTCAAAAACATCAAAATTATAGATGGCTTTG CTCTTGATGGAAGAGCTATGGAAAAAGGAAATGTGATCGTTTCGTCCACA TATCAAGAAGACTTTCAAAATATTCACATGCTACCACCATTGTTCGATTT TCAGCCTCAAAGATTCGACGATGATAAAGGTTTGTCTACATTCAGAACCC TTCCCAATTCGACCCTCAAAGAAGTGCATTTGGTTTAGTTAAAGTAGGCC AAGCAGGCTATCTAGAAATCTCGCACTCAGAGCCCTCTGCATCACGTTTT TAAATTTTACGGACTTGATATAATTCAACCTTTCGTGAGCGCTATCAGCA TCATAAAAAAGGCTCAAATTCACGCCCACTCTCCCAACTATGATAACGCG ATTAAGCGAGCCTTGTCACCATGCACTAGCAATCCCGTACCCAGCCCTCT TATATACTTGCTTTTTTATTATTGCCATACAGTACACCTTTTCGACCGTA GCCGCTAATTGCCATTTTTTACCATCCTAAAACCGTCCCAGTCTTTTTTT CGCGCCTAAAGACAATAGAAAAAAGTATAAAAAAGGATTGGATCGAGTTT AGGGTGGTAAAAAATGCCCGCCCGGCAATTGGCGGCTACGGTCGAAAAGG TGTATAGCTCTCACGTTATATGGCAATCGTGGTAAATTACTTTTTAAAGG TTGCAGGGTTATTTAGCGTGGAGAAAATTCAATTCAAAAATGCCGAAATA TGTTTTCAATTTTGTATCCGCTTAATAACTTTATGAGGTGAATGTTTACC TAGATATAATTATTATTGATAATTTTCGTTTTTTTTTATAGAAAAACTTC CACAACGATGCTTCCCGTTTTCCCAGCCAATAGTTCCGCATCGTAAGCGA GATAGTGAGATTCCCATTGCACCTGGCTTCAGTACTTTCTTACACAGAGT ATCGAGAACGAACAAAGACAACTTCTTAAAACCAATTCTTAAAAAAGAGA CCCATTCTTCTTCATCGGCATCGCAAAAGCGAAATTCAACAGAAAATAAA TCTGATAAAGAGAGTGATTCACTGTCGACTTTTCGTTGCCAAAATCTTGA ATCAAGATCGGTATTTGTGTCACGAAAACTTGAATCAAAGCCAGCTTCTG AATGCCCAAGTCCTGTTTTGAAGTCAACGTCATCTTGCTTGAGAACTGGA CCTTCTTCGTGCCTCGGGAGTAGTGCACAGGCGTCTGCGCGCCAAACTCC TAATTGTACAACTCCATCATCAGCAAGTAAACACGCAGAGCGACAAGCTA CCGGAGGAAAAGTAAGTTTTGTTCCTTGTTTGAGGATTTTTATATTGGCC AAATATTTAAAAAAAAATCTTACCCACTTATCTTTCTAAAACAAGCTGAG AAATTTGGCTGAAAATTTAACTATGGCCTAACATCGTTCCCGTGTATAGT AGGCTTATTTACGTTATTGACAAACGCCAGCTCTATCAGTAAGTATGAAA CAGCTAATAATGCGCAGGGAACGAAATTGGTTATACCATTTTTTTACGCA GAGAAGCCGAGATACTTATTTGGCGTAGTTTTACGTAGGCTGCACGAATC TCCTCTGATTACCCTGAGAACATACCAGCTTCTGAGGACCCCAAGTAAAG AAATTTTATCGCACATGCGTTAATCTAATCACTGTAGAAAGAATCAAAGA TGAAGAACAAATATTACCATATTAATGTCTAGCAGACTGTATCAATATGC ATGTTTACTATTGACGAATTTCCCAGAAACCTCCGAGTGTAATTGGAATG AGTTTCTTTCTACATGATTCCCAAATGTATAACAGTAATTACTTAACTAT TAATTATGGTAATATTACTTCAATGGAATCGAAATATTAATTGATTAACT AAATCTTTATGTTATGATTCTCTATCACTGACTCTTTTTAAAAAGCGTTG ATGACATATATTTCTAAGTTGTGTTTTCAACGACGCGAAAAAAATATCAA CTTTGAACTTAATGTAGGTTCTTGAGTTGTCGTCATGGTTACTTTTCTCT GTGTTGATTGCGCGCTGAATAGAATCTGGATTATTAGTCGGCACAGGTCG ATATATAATTTCATTCTGTACTTTTCACAGTAGTTGATACACAATCATTG GACTTCTAAACCTTTCTAAAAAAATTGAAAGAGGTAACTCTCGGACGGGA ATTTCATTCATGATTAGCATCCCCTCTATCAAAACATATCAGAGAGGATG CGTACAGCCTAAATCTTATTTTACCAAAAATTTGTCGTCCCGCGCACCTC CGCGTGCACGCATTGTACTGTCTGATTAGACGATGGTATCGTCCGTTATA GTGATAGTAAAGGTAGGAAAATATAGGTATAGCGTTATGGCGGTATAACG GAAAAAATATGCGGGAGAGCTTCGAAAACTGGCAAACTTTACCGACTGTA AACAAACTATTTTTAGCAAAAAACCCGTTTGTGAATGGGCTTTTGGCTTA TTTCTTAGATAGTGATTTATCTTAGACTATAGCATAGTGTACTGTCTGAT AAGAAGTTGTTTAGTTTGCATTCTTTAGGCGGTAGAGAGTATACCGTACA GCTTAAACATGTGGAGAGGAGAGCACAGGCATAATATCTAAAGTATACAA AATATGATATTCTGTTTGAGACACAAACCTTTTTTGACAATCTTTGAAAA GAATTTGTTAAGACATATAAAGTTTCAAATATTGAATATTTATTTAAGTT TCACGATTTAGGGGCCATCATGATGATACTATGACTACAAGTATCACAAA TCACTTTTTTATTCGAAACACATATCTGTTACTTGGAGACATTTTCTATA TTTTAAGATCCAAATGATCTGTCATCTCAAGTAAGTTTAGCTCCGAGTAA AAATCCATTGAGAACTTAGCTTATTTCCTTGTTTTTCGAAATTTGGAGTT CGGGCGAGAAAGTAGATTTTGAGCCATCTCTTAAATTTAATTGGATATTT CAATTTGGCACGGGTTTATAGACTTCCAGGCTATATTATGAGCTTTACAG TATTGGACTGTTTTTGAACTTTTGGATGCTCAGATCCTAAGTGTTAAATC TAGCGCTAAAACTCAGAGTTAAAACTTTACCATTCCAACCTAACTTAGAG CACTTACAAATCGTTTGTGGTTTTGAAAATTCGTGGGAATTTCCCTTTTT TCTAAAATATTACGACCATAACTGTAGTTTTAATGAATGAAATCTGGAAC AGTTAGAGAAATCTTCTTTCTGTTAATAACTATCCCTCAAAGTTACGACC ATAACTGTAGTTTTAATGAATGAAATCTGGAACAGTTAGAGAAATCTTCT TTCTGTTAATAACTATCCCTCAAAGTTAATACATCTTTATTTTTTCAAAT AATATTTAGACTACACTTGTGCCAGAGTTAGTTCTACAAGAACTCGTAAA GCTCGGTCACTATACACCATCGTCTCAAAACAATTCATGTTTCATACGAA AACCCAAACAAGAAAGACTTCTCACTCCTGAAATGAGACGAGAATTTTGG CGTAAGAATCCACATCGTGATGGAATCATCAACTCTGGTCGTGTTCTCGG TCAATCACAGAATAAACCAGAAATCTGGCAAACTGTTGGTTGCATGTGGG ACAAACTTCAAGATAGAAAACCAATTGCTCCGAGGTGAATTTTCTTTATT TTCTACAAATCCATTTTTAAACTGATGTTGTTTTAATGTTATAAGGATAA ATTTAGATTCAGATCTGCTTTGGTCATATAGCAGAGAAACTTAAAAAAAA ACTTTTAAAATAAAGCTCTTTCTGAAATCTCTTGACCATAAAAAAGACTT GTAAACTACCACTCGAGGCTCACACAACAACAACAAAATGCCAACAAAAT CTTCATTCCTTTTAAAGAATCTTTTCAAGGAATTCTCATCAACCATCAAG GAATTTTTCTCGTTTCAGCATGCGAGCAGTGCAACAGGACACACAAAGAT TATTAAGTCGTCCTCGTGTCGGCGAAGAAAATAAGAATTTCAACACTTTT GGTTACACCAATATGCTGTAAGTTTTTGTGTCCAAAATCGTTCCCAGTCC TTATTAGCAACTTTCACAAAAGGCGCATTGTATCTAGTCTGAATTGGGAC AATACTCAATTAGGCTATCCCCTGAATCGCAGACCTCTACAAAACTGCAG GAAGAATAAGGAGCACGAATCCGTCATTGGATGCCAACAATTATACCGAT GTATGTCCATCAGTAAAATTGTAAAATTGAAAAGTGAGATGAGAGAGTCT CACTTCACTGTACAGCATCCTATCTAAACACCCCTGTTGCGATCGTAATC ATATCTCCGTACCCCCTGTCTCACCCTCTACATCGCTAGACTTACATTCC TATTTCATGCTTCTTTTTCACACCCCTGTTTCAAAACTTTGTCACATAAC CTATTCCAAAGCTTCATTCATCTTATGCCACAAACACGTTGGAAAAATAA GGGCAAAATAATGAAATCATTGAAATATGAAATATGTTGTTTTCCCTACT ACTAAAAAGCAAGAGTTTGACATTTTCATGTATATTCATTCCAAATCCTT TTTCCAGCTCTTCTAACATTCCTGGGTACAGTGGTTGCCGACCTCAATTA TTACCGAATCGTACAAAAGCACAAACGTGTGGCTTTCAATCCATCTCCAG ACTCACCTACAGGTAAGGATGATCAAACTCGAACCCAGTCCTTAGTTCGC TTTTTTATGATTTGTGATAGCGCTCACGATACGAAAAGGTGTATTGTATC ACGTTCGTCAGTAAAATCAAATTTGATGTAAAGTTGGTATGGACGCGAGA TTGACCTAAGTGTAATTTTAACTAGATTGCCTTTGCCGATCGGTGTGGAT GTGTCGCTTTAGCGGCATCTTATCACCATTGGAACTACAAACTCGATCCC AGTCCAGTTCGCTTTTTCATGATTTCTAATAGCGCTCACGATTATCACGC TCATCAGCAAAATAAAATTAAGAAAGTGTCAAGTAGCTCTGTAAATAGAC GATGATTGGTTTTCGTAACCTTTCTAGACAAAAAAATTCACAGCGCTCCA AAATTCAATTTCTGACTTCTGAGAACGAGTTTTTAAATATCGTTGGGAAG GGTATTAGTTAAAATTTTGTTTTGCGCACGTGTGAATTGTGAAGCACCGA TGTTAGTTGCTCAAAAAACGAACCATTTTACCCATTATCCAATTTCACTT TTAAAGCCAAACACTTTAAATTTTATTTAGGACAATAAAATTTCCCTTCT AACTATTTTTATTTTCTTCTTATAGGGAGCATCCAAAAGTGACGTATCGA CTACCTTCGTACGGCCACCGAGCGCCAATGTCAAGAACTGTCACACTGAC TGAACCTTACAATCCGTTCAATAAAGTTGAACCAGAACTTCTCGTCATTT AAAACAATCTAAAATCTTATGTTTATACTCGATAAAATATTTTCCGAAAT TTAAAATTCAATGTTTAAAATTACACTCCAAAACCATCCCCACTTGAACC TTGGAACAAGGGAATTTCTATCCCCATCGGGATTTTCAATAGGAATTTTA TCCCAAGGGAGGGGGCACTTAGGCAGAATTAGGTACGGGAACGTGCTGCT GATCAGGGTCTCTTTTAGACTCTAGAGATATCTGACAGGGTCCCAAATTT AATAATTTTCAAGATGTGGATCCATCAATCTGACAAGGTCGATTTTTGGT CATTTTGGACAATTTTCAGGGTTAAAATAGGAAATTTTTTGTTCTAAAGG GTCCCAAATTTACCAAAAGAAAGTCAGTGCCCCCCCCCGGTTTTATCCGA ACCAAGGAAAAAAGTTCCACCGGTGCGTAAAAATGGAAAATTAGAGATAA CGAAGATAAACAAAAATGTGAAAGTGCAGTGTAATGGAGTGAATAAAAAA GTTTGAAAATACAAACGTGCTCTAAAATACTAATTTTGAACAAATTCAAT TCTAAATGTGGCATACTCAGCTAAAGAAAGGTCCTAAATACCCTGTCTAT TCTATTTGTGAATTAAAGTGGGCATAAAGTTGGCAGTCTAATGCATTGCT CTCTATTGACATCAATGCAAGGCCATCTTTCAATCTTTTTCAAGCAAAGA TTTTAACTGTCCACTCAAACAATTAGAATAGACAGGGCAAAAAGTCGGCC GACTAAACTAGAGCTAAATTTCTTCACTCCTACATATCATTTTAGCTGAG AACAGGGATATGAACTTATTTAGGGGCTCGACAAGGGGGACGACAGGCAA GAATAACACAATAATTAAAATTTTATCTGACTATTATATGTTATATTAAT AACGATTATTTTTTTTACTTCTCGTAAATTCAATATATACATATATGCAA ACTAATAGTGATTGCCGGCTATTAAAAATGAAGAAAAAATAACGATATTC TCACAAAGTACACATCTTTTTATAAGAACATCCAAATTTTTTGAAGCTTT CGGATGTTCTTAACTTTTTGAGTTTTAAGCCTAAAAATGTTCTTATTTTC ACTATTTTGTGAGTATTTTTGTCCATTTTCCTAAGAAATTGGGTGTTTTA GAGTCCGCGAAGCATTAAAATGTACTTCTTGTTCTTAATATTTTTTATAT CGAAGCCTCATGTTCTTATAAAAAAAACGTGTACGCCATTTCTTGAGAAA GCTTAAAACAACGACCACTTCATATAAAAAAAGGCCGAGAGAATTGAGCT CGGGTACCTGCTAGATGTATTGATGACGTTCCTGGAAAGTTCCGATTATT TTCTTAACTATTGTGATTACATTTAGAACAATCTGCATCTTTGACTATTT CAAAAGCGAATTTCGAATCGTATATCAAATAACAAAGCATATAATATTTT AATAATCTTTTCAAATCCTTGTATTCTTCTCTTGCAGAGCCCCCTCCCAG CGGTTTACGTGATGGAATGATCGAGTTGATGGCTTGATGCCATGATTTAT GATTTCAAAAAGCCTAATGCGTGATGGACAGTAATAAGACTTTTTTAAAT CCGC

Coding sequence (CDS) from alignment at sc0000077:326158..333211-

>TCONS_00007488 ID=TCONS_00007488|Name=TCONS_00007488|organism=Clytia hemisphaerica|type=CDS|length=1254bp|location=Sequence derived from alignment at sc0000077:326158..333211- (Clytia hemisphaerica)
GAGCCAGTAAAGTTAGATTTCAAAAACATCAAAATTATAGATGGCTTTGC
TCTTGATGGAAGAGCTATGGAAAAAGGAAATGTGATCGTTTCGTCCACAT
ATCAAGAAGACTTTCAAAATATTCACATGCTACCACCATTGTTCGATTTT
CAGCCTCAAAGATTCGACGATGATAAAGAAAAACTTCCACAACGATGCTT
CCCGTTTTCCCAGCCAATAGTTCCGCATCGTAAGCGAGATAGTGAGATTC
CCATTGCACCTGGCTTCAGTACTTTCTTACACAGAGTATCGAGAACGAAC
AAAGACAACTTCTTAAAACCAATTCTTAAAAAAGAGACCCATTCTTCTTC
ATCGGCATCGCAAAAGCGAAATTCAACAGAAAATAAATCTGATAAAGAGA
GTGATTCACTGTCGACTTTTCGTTGCCAAAATCTTGAATCAAGATCGGTA
TTTGTGTCACGAAAACTTGAATCAAAGCCAGCTTCTGAATGCCCAAGTCC
TGTTTTGAAGTCAACGTCATCTTGCTTGAGAACTGGACCTTCTTCGTGCC
TCGGGAGTAGTGCACAGGCGTCTGCGCGCCAAACTCCTAATTGTACAACT
CCATCATCAGCAAGTAAACACGCAGAGCGACAAGCTACCGGAGGAAAAAC
TACACTTGTGCCAGAGTTAGTTCTACAAGAACTCGTAAAGCTCGGTCACT
ATACACCATCGTCTCAAAACAATTCATGTTTCATACGAAAACCCAAACAA
GAAAGACTTCTCACTCCTGAAATGAGACGAGAATTTTGGCGTAAGAATCC
ACATCGTGATGGAATCATCAACTCTGGTCGTGTTCTCGGTCAATCACAGA
ATAAACCAGAAATCTGGCAAACTGTTGGTTGCATGTGGGACAAACTTCAA
GATAGAAAACCAATTGCTCCGAGCATGCGAGCAGTGCAACAGGACACACA
AAGATTATTAAGTCGTCCTCGTGTCGGCGAAGAAAATAAGAATTTCAACA
CTTTTGGTTACACCAATATGCTCTCTTCTAACATTCCTGGGTACAGTGGT
TGCCGACCTCAATTATTACCGAATCGTACAAAAGCACAAACGTGTGGCTT
TCAATCCATCTCCAGACTCACCTACAGGGAGCATCCAAAAGTGACGTATC
GACTACCTTCGTACGGCCACCGAGCGCCAATGTCAAGAACTGTCACACTG
ACTGAACCTTACAATCCGTTCAATAAAGTTGAACCAGAACTTCTCGTCAT
TTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004222XLOC_004222Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007488-proteinTCONS_00007488-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007488-exon-sc0000077-1575043694:333033..333211TCONS_00007488-exon-sc0000077-1575043694:333033..333211Clytia hemisphaericaexon
TCONS_00007488-exon-sc0000077-1575043694:331901..332370TCONS_00007488-exon-sc0000077-1575043694:331901..332370Clytia hemisphaericaexon
TCONS_00007488-exon-sc0000077-1575043694:329528..329802TCONS_00007488-exon-sc0000077-1575043694:329528..329802Clytia hemisphaericaexon
TCONS_00007488-exon-sc0000077-1575043694:329145..329243TCONS_00007488-exon-sc0000077-1575043694:329145..329243Clytia hemisphaericaexon
TCONS_00007488-exon-sc0000077-1575043694:328500..328604TCONS_00007488-exon-sc0000077-1575043694:328500..328604Clytia hemisphaericaexon
TCONS_00007488-exon-sc0000077-1575043694:326158..327886TCONS_00007488-exon-sc0000077-1575043694:326158..327886Clytia hemisphaericaexon
TCONS_00007488-exon-sc0000077-1510915933:333033..333211TCONS_00007488-exon-sc0000077-1510915933:333033..333211Clytia hemisphaericaexon
TCONS_00007488-exon-sc0000077-1510915933:331901..332370TCONS_00007488-exon-sc0000077-1510915933:331901..332370Clytia hemisphaericaexon
TCONS_00007488-exon-sc0000077-1510915933:329528..329802TCONS_00007488-exon-sc0000077-1510915933:329528..329802Clytia hemisphaericaexon
TCONS_00007488-exon-sc0000077-1510915933:329145..329243TCONS_00007488-exon-sc0000077-1510915933:329145..329243Clytia hemisphaericaexon
TCONS_00007488-exon-sc0000077-1510915933:328500..328604TCONS_00007488-exon-sc0000077-1510915933:328500..328604Clytia hemisphaericaexon
TCONS_00007488-exon-sc0000077-1510915933:326158..327886TCONS_00007488-exon-sc0000077-1510915933:326158..327886Clytia hemisphaericaexon
TCONS_00007488-exon-sc0000077-1491911889:333033..333211TCONS_00007488-exon-sc0000077-1491911889:333033..333211Clytia hemisphaericaexon
TCONS_00007488-exon-sc0000077-1491911889:331901..332370TCONS_00007488-exon-sc0000077-1491911889:331901..332370Clytia hemisphaericaexon
TCONS_00007488-exon-sc0000077-1491911889:329528..329802TCONS_00007488-exon-sc0000077-1491911889:329528..329802Clytia hemisphaericaexon
TCONS_00007488-exon-sc0000077-1491911889:329145..329243TCONS_00007488-exon-sc0000077-1491911889:329145..329243Clytia hemisphaericaexon
TCONS_00007488-exon-sc0000077-1491911889:328500..328604TCONS_00007488-exon-sc0000077-1491911889:328500..328604Clytia hemisphaericaexon
TCONS_00007488-exon-sc0000077-1491911889:326158..327886TCONS_00007488-exon-sc0000077-1491911889:326158..327886Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000077supercontigsc0000077:326158..333211 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.11426 0.0557108 0 0.189854 5.62414 4.68779 7.78566 10.7957 2.31083 2.92197 1.38913 3.61459 0 0.157834 0.0324403 0 0.128662 0.0439581 0 0.287539 0.147944 0.323309 0.262017 0.224943 2.49523 3.34619 0.156673 0 0.0634099 0.0646046
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR027867DUF4540
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007488 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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