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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007496 ID=TCONS_00007496|Name=TCONS_00007496|organism=Clytia hemisphaerica|type=transcript|length=1375bp TTtagacaaaatcaaaataatatcgatccaatcagaaataaaaaaacaaa agaaaaaatgaaaaatcttttcaaaatcgtcACCTCGCCGCTTTTGGATT CAAGTGCCCTCCATTACAGAGCGTCTATGGTGGAGTGCTGCAGATACATC AGTAAGAAAGCACCTGCGAAGGAGGGCAAAACACGAATGATGAGGAAAGA CCAAACAGATAAACACACCGAAATAATCGAAGTTGATAAATCGGACAAAC ACAGATACTTCAAATGGAATTATCAACCGCTACCCACTCAGACTTCTGAA GATGTTGTCAATCCGCATTTCAATATTCGATCACCTGATTTCAAGCTTCC AAATCCACGCGGACGTCTCGCGCGCTCCGTGTGGCGACAACGCATCGCTG AAGTACAAGCCGCGCGAAATGATCCAGAACTAGAAAAACTGTCAAGACAC AGGAAATtaTTTCTACCCCTGGAGGAGATCGAAGCCGAATGGAAGCACGA GTTTGGTATTCATGACGTCAACAAATTGATTCGTTTCAATCAAATATCAC GTGACTTGTTCCAttcagatgacgtcatcatgaatACGTGGTTGGATATC GCTTTCACGGATGTGAAAATACATCGAGGAAATTTGGTTCAACCCTCACA ACTTCTCACAGCACCTACTTCGATATCTTTCACACCAAAGGAAGGTCAAC TGTACACCCTCATTGTCAGCAATCTGGATGGTCATCCTGAAGGCACTGGG GACGAGGTTCTACAATGGATGGTTTCCAATATTTCAAACGGTGATGTCCA AAACAGTGACACCATCTTGAATTATTTACCACCGTTGCCATGGCAAGGTA CTGGACATCACAGACTAACCTTCACTTTATACCATCAAACTGAGGGACGG GTACAGGCTGACCCCATCAATGAACAAAATATGTTGAAGAACAGATGCAT GACGTCACATGAGTTTGCAACAGCCAATCACTTACTTCCAGTCGGTATCA CGTGGTGTCAAGTCACGTGGGATGAAAGTGTGTCTGAAACATGCAAACTG CTCAAAGATTTGTCTGGTGAGCCTGTGTTTGAAATGGAAGAATATCTCGA GCCCAAAGTTGAGCAGGAAATGTTGATGAGAAAATGGAGTGAATTAAAAT ATCGAAACATGTAACGAACTCCCTGTGAAAGTGTATACATAGTTATGTAg tatttttatatatcaaaatttatcacttagaaaatattaaatttcaaaat tgaatagaacctttttatttgaattcagtactttaatgggataaactttc gcaggggattaaatttcgcggattagGGTGTCATCcacgaaaatccgcga aattcttaatggaaatttggaagga Run BLAST on NCBI protein sequence of TCONS_00007496-protein >TCONS_00007496-protein ID=TCONS_00007496-protein|Name=TCONS_00007496-protein|organism=Clytia hemisphaerica|type=polypeptide|length=387bp
FRQNQNNIDPIRNKKTKEKMKNLFKIVTSPLLDSSALHYRASMVECCRYI SKKAPAKEGKTRMMRKDQTDKHTEIIEVDKSDKHRYFKWNYQPLPTQTSE DVVNPHFNIRSPDFKLPNPRGRLARSVWRQRIAEVQAARNDPELEKLSRH RKLFLPLEEIEAEWKHEFGIHDVNKLIRFNQISRDLFHSDDVIMNTWLDI AFTDVKIHRGNLVQPSQLLTAPTSISFTPKEGQLYTLIVSNLDGHPEGTG DEVLQWMVSNISNGDVQNSDTILNYLPPLPWQGTGHHRLTFTLYHQTEGR VQADPINEQNMLKNRCMTSHEFATANHLLPVGITWCQVTWDESVSETCKL LKDLSGEPVFEMEEYLEPKVEQEMLMRKWSELKYRNM Run BLAST on NCBI transcript from alignment at sc0000077:671364..679141- Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007496 ID=TCONS_00007496|Name=TCONS_00007496|organism=Clytia hemisphaerica|type=transcript|length=7778bp|location=Sequence derived from alignment at sc0000077:671364..679141- (Clytia hemisphaerica) TTTAGACAAAATCAAAATAATATCGATCCAATCAGAAATAAAAAAACAAA
AGAAATCATGAAAAGTCTTTTCAAAATCGTCTCCTCGCCGCTTTTGGATT
CAAGTGCACTCCATTACAGAGCGTCTATGGTAGAGTGCTGCAGATACATC
AGTAAGAAAGCACCTGCGAAGGAGGGCAAAACGCGAATGATGAGGAAAGA
TCAGACAGATAAACACACCNAACGAAAGAAATCACAAAATGAAAAATCTT
TTCAAAATCGTCACCTCGCCGCTTTTGGATTCAAGTGCCCTCCATTACAG
AGCGTCTATGGTGGAGTGCTGCAGATACATCAGTAAGAAAGCACCTGCGA
AGGAGGGCAAAACACGAATGATGAGGAAAGACCAAACAGATAAACACACC
GAAATAATCGAAGTTGATAAATCGGACAAACACAGATACTTCAAATGGAA
TTATCAACCGCTACCCACTCAGACTTCTGAAGGTATGACATTAACGAGTT
CATGTATTTGCTCTTCTGAGGACGGTAGAGTGACTGAAGCGATTTGGAAA
CAACCTACAGATTTGATCTGCAAAATCAAGCGTCCTTAGTTGATCAGGAT
CTAGACGGATCTGTGCGACCTAGGGGTGAAGGTACTTGATTGTTCCATCT
TATATTCTTTGAATTTCTTTCTTTCTCTAGATGTTGTCAATCCGCATTTC
AATATTCGATCACCTGATTTCAAGCTTCCAAATCCACGCGGACGTCTCGC
GCGCTCCGTGTGGCGACAACGCATCGCTGAAGTACAAGCCGCGCGAAATG
ATCCAGAACTAGAAAAACTGTCAAGACACAGGAAATGTATGATAAAAATA
TTTTTGTGCTTTATTGTATAACTTCTGAGAATTTGAAAAATGCGTAAAAA
TGTCTTAGGAATGTGTATCGATCAAGAAATTTTGAACGATATACTAGACT
TCTCCTGGGCAAGTTCAGCGTTGATTCAGCAGAATTTGGCAAATAGTGCA
ACTGCCAATTTTTTAGCCGAGCTTTGATCCCTGATACTTTGTGGTATAAC
ATTGGCACTTCCAAATAGCGTACCATTTGATAGGCTTTTTTCACACCTCA
TCATTGTTCATCGCAATAGGACAATCTTAAGCTTTTGCTCATCTAGCGAA
AATAGTTTCTTATAGGCCACCATTTTGAACCACCATAGCAGCGGGAAGGC
AAGCAATACGCTATTAAGTAGACCTATATATAGGGAATAGGCGTAATGGT
GGTCATCGCATCTTGACTCCCGTCTGCATCATGGTATCTGTGTCATGGTA
TCACATAACCAGCGGCGTCCGCACAGCGTTATGCGTTCCGACTTGAAAAA
GGAGGAATTCATACTTCGTAATGAGTAGGACTCATTCTCCAGTGGGGAGG
GCTCATATCATCATATCATATATAGGAAATATATCTATAGAGGTCTGCGA
TTCAGACTAGGACAAGCTCTACGGTTGTAAACAGACAAAAAAAGCAAAAT
GATGGAGATATGGAAAGTGTAATCTATCAATTTTGAATCTCATAACAGAC
CATCCATCATACCAACTTAATTTGGCGGCGATGGCCAAGTTGTTTGAGGC
GTCAGCGTTACAAACCGTTCGAATCCTCGCTCCTTCCGATGCTCCGTTCA
GTTCGTAGATAGATAGCCGAGCCGGCTTGCCGTGGACGCAAATAGACGTA
GAATCGAACGACTCCACAAATCCTAAATTACGGGGCTTTTCATGTTAATA
TCGTTTCTTTAACCCAAATGTCGATGGGGAGTAATATTTAAAAGCAGGTT
AATCATATTCAATACACCTTTTTGACCGTAGCCGCCAATTGCCGCGCGGG
CATTTTTTTGTCCGCTTTATCCCACTAAAACCATCCCAGTCCTTTTTTGA
CACATTTTTCTATTGTCTATAGGGGCGAAAAAGGATTGGGACGGTTTCAG
TGGGATAAAAATGGTCGAAAAAGTGAATTGTCGATTTACGAATTTTTCTT
ATTTTTAGTATTTCTACCCCTGGAGGAGATCGAAGCCGAATGGAAGCACG
AGTTTGGTATTCATGACGTCAACAAATTGATTCGTTTCAATCAAATATCA
CGTGACTTGTTCCATTCAGATGACGTCATCATGAATACGTGGTTGGATAT
CGCTTTCACGGATGTGAAAATACATCGAGGAAATTTGGTTCAACCCTCAC
AAGTAAGTCTTAATCTCATTACAGGTCATCCATTCTGCATATCGCGCTCT
GCTCTAAAAGGGAAACGGCGAATGTAACGATCTGACCTGGTTGTTCAGCC
AAAAACCTGCTCTTTGCCTGGAAACAAGAGCGACTTGGTTCTAATTTTTA
TGACTGTGATTGGCTTTTGAATTTGATGCGATTGTTTTGCTTTAGCCAAT
CAAGGCGCTCAAATGCTCATTTTATATTCTTCTCAAATCTGGACGAGAAA
GATCAAAGCGGTACGCCAACCTGGGCAGATTCTCTTACGGAGCCATGTCT
TTTAGAGTTAATATGCGCCAGTGTGAGTGAACGGGGAGTGTGAGAATCTG
CTCACAGATTAGTAAATTCTCTCTCGACTGTCTTCTCTCTGTTAGTCAGT
GAAGGCGGTTAAGGGACCCATGGCTGCTTGTGTGATTTCGTGGTTCAAGT
TACAGTTGACTCTCTCTAAATCGAACTCGAATTGGGAAATCAAGTTTGTT
CGAATTATAGAGGGAATTTTAGGAGTGTTTCTTCTTGACGGGACGCGAGA
ATCGTAGAAAAGTTTGAATAATAAAAAGTTGGAGAAGCGAGAGTGTTGTT
ATCATAATTGTAATGAGAACAAAAGAAATGGGCGTGGCAGGTGGTGTGAT
TAAGGGAACTGTGCATAAATACCCCCAAAAACTGCCCCATATCGGTTGAA
TGTATAAGAATTAATAATTTGGTATTTGGGACTTTTATTATCAGCATACA
CCAAGATGATGAGGTTGGTGAATGAGATAATTCCGTGACTATGAAAATGA
TAAAAAAGTTTCCTTCCGTCATATATATCTGTGGCTTGAGAGGTCAAAAC
TTATCCTCTAACCGCTTGCAATGACTTGTTTAAATTACGGATGAATATCT
ACTGTTATGATGGCACATTTTTTTCGCAATCTATGGACTGAAAAGTTCTT
ACCATATATTTTTTGACCATATTATTACTTTAGCCTAAAAAAGAAGATTA
AAATCACTATCCCTTAATCGTTTCATTCTGATATTCAAGAAAACCTTTAA
AGAAAACAAGGAAATTTATGGCAAGTTTGAACGAACTGCGAAATTCATGA
TATGCACCACTGGAGAGTCTTCTGAAAACTTTTAAAATTGTCCACCCAAA
ACGTCACTTAAACAATAGAATAGTGACGTATTGGGTGAAAAAAACAAGGC
ATTGCAGTGGTGCATGCATATCATGAATTCTAAAATTTCACTAGTTTCTC
TGTATTACAAGTTTCTTTATCTGTAACCTTCTTTTTTTTAGCTTCTCACA
GCACCTACTTCGATATCTTTCACACCAAAGGAAGGTCAACTGTACACCCT
CATTGTCAGCAATCTGGATGGTCATCCTGAAGGCACTGGGGACGAGGTTC
TACAATGGATGGTGTATGATAAATTTTTCCATTTCCAGTTTTTAAGTTTC
TTTAGTTTAAGACAACGAGTGATACATGTTTTTTCTAAGCATGTGTTTAC
CCACCTCCTATATCAGGCTTGCATTATGCTTAGCATTCTATTGTTCTTAA
ACAACAGAGCTATTGTTTAGGTACCAAAAACTGAGCCTGTATAGTATATG
TTTATAAACGATATTCTTATTAAAAACTATTTCCAGATATCTAATTTGAT
ATCTTTAATAGTGGATTGTCACATTGAATTTCCGTTGTTTTGCCGTCCAA
CGTCAATCCCTCAGTACATCTTTGAATTAGTTTGAGGTTTTTTAAAATGG
GCGCTTGTCTCACGAGAACTGGAGTTTTAATCAAAATAAATAACTAGAGA
ATTTGCTCAGAATTATAAACTGTATCTAAAAATCGTGAAATCAAACCGTC
TGACTTATAACAAACTTGATATTTTTCTCTTGACTGGAATATATCCAGGT
TATGGGGAAATAGGATGCGGGGAAGTGCTTATTCAAGCTCTGGAGAGAGT
AAATTCAGTAAATTTTGAAAATTGTATCTGACAGGGTTGACTTTTGATTG
TACCTATCACCTTTTAGGACAAATTTTGCGTCTGATCAAAGTGTATTATG
TTATTTTTTATAGTTCCAATATTTCAAACGGTGATGTCCAAAACAGTGAC
ACCATCTTGAATTATTTACCACCGTTGCCATGGCAAGGTACTGGACATCA
CAGACTAACCTTCACTTTATACCATCAAACTGAGGGACGGGTACAGGCTG
ACCCCATCAATGAACAAAAGTAAGTCGCGAAAGTCCATCTAGAATTCAAT
GTTACTACTCGAAGACGAGGCTCGTTTTTTTATGAAATAAATAAGTTTGC
GCATTCAATCAATCAATCAATCAATCAATCAATCAACCACTCACTCACTC
ACTCACTCACTCACTCACTCACTCACTCACTTCAAAATTTTGAATCACTC
GGGTCACTTTTTCATTTTTGAGGCCTTGAAACGAGTTTTTTCAAGGTAGG
TTAAGATCTAACCTTTCTTAATGATTTCACAATTGAGCATAGAAGTGATG
CAAAAACATAGTACCAGTGTGGGCCTTGAAGTGATTTTTATGATAGAGTC
ACCTTTCAAATCACACAATTACGCAAAAAAAATCAATATCACGTTATCGT
GAGTTAAATTTCCTTTCTATCACGATCATGTTGATCACTTTGGTTCCCCC
GAGCAGGCAATCACGAACTTTAAATTTTTAAATCACGAAATCACAAACTT
GAAAAACGCCAATCACGCCATCACGAAAACTACTGGGGGCCTCATGATAT
ATGATTAAAGGTTTTTGTTTTTAAATAAGAGTGATATCGCTTGCTTACTC
ATCAATTTTGATTTACAAGCTTTTTCACATTGAATGAACACGGATGTGGA
GCAAAATTGGTCAAAAAGAGGAAAAGAAAAACAATTTTTTGCTTATATCA
GCATAATATAACAATAGGCAGACACTGTCCTGGTATGAAATATGTCTGAT
ATGAAACGGGAACACTTATATAAAAACAAAACCTTCAACAAGTTTGAAAT
TTCGTTTTTCTGCTTTCAGTATGTTGAAGAACAGATGCATGACGTCACAT
GAGTTTGCAACAGCCAATCACTTACTTCCAGTCGGTATCACGTGGTGTCA
AGTCACGTGGGATGAAAGTGTGTCTGAAACATGCAAACTGCTCAAAGGTA
CTTATTTATCATATCATTGTTTCATCCCTGATTTAGGTTCCTTTTAGTTT
TATAGCTTTGAGTCTACTTCTGACCTAACTTTGCTTTCTGATGACTTTTG
ATGGTGCTGAGTCTAGTTAAAACCTTTTAGCGGCAAACAAGACATCTGAC
AGCCTGTCTAAACGCGTTAAGGCTTGGGGAAATGATTCTGATCAAGAAAG
TTCCTTCTTCTGATCATCCTTTTCATTTCATTTTTTGAAAAAAAGATTGT
AGAGCAACGAATTATTTTGTTCCAGACTAAAGGCTTGGGGACACGAGAAG
TTTTTTTCGCGTTGGTGCAATGCAACATTCTCTATCCCACCAACACAAGA
AAAAAAGTGCGTGTCCCATGGTGTCTTTTTTGTTTTATGGGACAAAGAGT
GAAGGAAATACCCAAAAGACACACTGATTTTGTCCCTGGGACAATGGAGC
AAAATTTATTTGAATCAATTATGCTCCATTGTCCCAGGGACAAAAGTGAG
ATTTTACTTTTATTGGTAGGAAGAAAACGAGGTGGAGACACAAGAAAGCG
TTTCAGGTTGGTGGGATGGAGAATGTTGTATTGCACCAACGCGAGAAAAT
CTTCTCGCTTCCCCAAGCCTTTAGCCTGGAAGAAAATAATTTATTGCTCT
ACCGTTATTTTTTCAAACAATGAAATGGAAAGGATGATCAGAAAAAGGAA
CTTTCTTGATCAGAGTGGTTTCAATGACTTTATATAATTTCGTTTCATCC
ACTGACAGTCCAAAAATCATGACCTAAAAGGAAGTTGTGCGCCAAATTTA
AGCAACATTTATTTTCTTTCCATGCTAGGGTTATTTTTTAGCTAATTATA
ACTAGCTTATGACTGAATTTTAATTTTACATCGTTTTTTATTCATAGAAC
TATATTTCACAGGTCTATCGACCTCTACGAAATGATTTTAGATTTATAAA
ATATTGTCCAATCTTCATCTGTCGTCCAGTCATCAGAAGATATGGACAGA
GCAGGCGTAGTTTTGGTCTTTGTCCTAGCTTTTGCTTTGAAAAATAAAAA
TTATATCATGTATGGACTCACAGTGGTATTCTAGATAACTAGAATTGGCT
ACGGACAAACACTACAGTTTGCAGACACTTTAAAGGATTATAGATTGTTT
ACATAACTGACAACTTTTTATTTACATGATAAGCTTTCGGAAAGAATTCT
TTGTTTGTTTTTGTTGTCAAGTCAGCGTATCAACTAAATTACGTAATCCT
TGCAACAAAAACAAACCATGCAAACACCCGGCGATCAGTGCGGAATTCCG
CTGATTAAAACGAACCGTACGCGTTTTTTATATCAACGAACAATATTCGT
TTGCCAAAATATTGAGAACAAGTTAGGAACATTTTAAGGCTTTGCAGACT
CTTAAACTCCCAATTTCTTAAGAAATACACAAAAATACTCTCGAAATGGC
AAAAATAAGAAAAGGTTAAGAATGTTTTCACTTAGACTTCACATTCAAAA
TGTTAAGAACATCAAAAGGCTTTAAAAGCTTTGGATGTTTTTTTTGTTCT
TTTAAGAAANCTTTTTTGATTTTTGGGGCCTGGGACGAGTTTTTCGCCAA
AACGAGGCTAAAACTTTGGGGCAGCCTGGAGACTTCAAAAATTGTTCGAT
TTGGCTGAAATTTTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTTGTTCCTTGGGTGAATATCTGGGGGTCTACAATTGGGCCT
ATGAATAATTTGAAGCCACTGAAGTTGAGCCCAGTGCGTTGCGCACGTTC
GACTATTTTTATAAGAGCCTTCCAATCAAAACAAATGTTTTTTTTCTTTC
CATGAAAAATAGGCTGATTATGTCAAAAACTTTACAAACATGTAAGAAAC
ATGTAAGGCTCAAAAGGCCGATTTGTTAAGAAACATTGAGGCTGCTTGGC
AAAATTAGTTTCTTAAAAAAACATGTATTCAAATCTTTTTCCATCTTCTT
CTTTTTACAGATTTGTCTGGTGAGCCTGTGTTTGAAATGGAAGAATATCT
CGAGCCCAAAGTTGAGCAGGAAATGTTGATGAGAAAATGGAGTGAATTAA
AATATCGAAACATGTAACGAACTCCCTGTGAAAGTGTATACATAGTTATG
TAGTATTTTTATATATCAAAATTTATCACTTAGAAAATATTAAATTTCAA
AATTGAATAGAACCTTTTTATTTGAATTCAGTACTTTAATGGGATAAACT
TTCGCAGGGGATTAAATTTCGCGGATTAGGGTGTCATCCACGAAAATCCG
CGAAATTCTTAATGGAAATTTGGAAGGA Coding sequence (CDS) from alignment at sc0000077:671364..679141- >TCONS_00007496 ID=TCONS_00007496|Name=TCONS_00007496|organism=Clytia hemisphaerica|type=CDS|length=9312bp|location=Sequence derived from alignment at sc0000077:671364..679141- (Clytia hemisphaerica) ATTTGTCTGGTGAGCCTGTGTTTGAAATGGAAGAATATCTCGAGCCCAAA GTTGAGCAGGAAATGTTGATGAGAAAATGGAGTGAATTAAAATATCGAAA CATGTAATATGTTGAAGAACAGATGCATGACGTCACATGAGTTTGCAACA GCCAATCACTTACTTCCAGTCGGTATCACGTGGTGTCAAGTCACGTGGGA TGAAAGTGTGTCTGAAACATGCAAACTGCTCAAAGTTCCAATATTTCAAA CGGTGATGTCCAAAACAGTGACACCATCTTGAATTATTTACCACCGTTGC CATGGCAAGGTACTGGACATCACAGACTAACCTTCACTTTATACCATCAA ACTGAGGGACGGGTACAGGCTGACCCCATCAATGAACAAAACTTCTCACA GCACCTACTTCGATATCTTTCACACCAAAGGAAGGTCAACTGTACACCCT CATTGTCAGCAATCTGGATGGTCATCCTGAAGGCACTGGGGACGAGGTTC TACAATGGATGGTTATTTCTACCCCTGGAGGAGATCGAAGCCGAATGGAA GCACGAGTTTGGTATTCATGACGTCAACAAATTGATTCGTTTCAATCAAA TATCACGTGACTTGTTCCATTCAGATGACGTCATCATGAATACGTGGTTG GATATCGCTTTCACGGATGTGAAAATACATCGAGGAAATTTGGTTCAACC CTCACAAATGTTGTCAATCCGCATTTCAATATTCGATCACCTGATTTCAA GCTTCCAAATCCACGCGGACGTCTCGCGCGCTCCGTGTGGCGACAACGCA TCGCTGAAGTACAAGCCGCGCGAAATGATCCAGAACTAGAAAAACTGTCA AGACACAGGAAATAAAATGAAAAATCTTTTCAAAATCGTCACCTCGCCGC TTTTGGATTCAAGTGCCCTCCATTACAGAGCGTCTATGGTGGAGTGCTGC AGATACATCAGTAAGAAAGCACCTGCGAAGGAGGGCAAAACACGAATGAT GAGGAAAGACCAAACAGATAAACACACCGAAATAATCGAAGTTGATAAAT CGGACAAACACAGATACTTCAAATGGAATTATCAACCGCTACCCACTCAG ACTTCTGAAGTTTAGACAAAATCAAAATAATATCGATCCAATCAGAAATA AAAAAACAAAAGAAATTTGTCTGGTGAGCCTGTGTTTGAAATGGAAGAAT ATCTCGAGCCCAAAGTTGAGCAGGAAATGTTGATGAGAAAATGGAGTGAA TTAAAATATCGAAACATGTAATATGTTGAAGAACAGATGCATGACGTCAC ATGAGTTTGCAACAGCCAATCACTTACTTCCAGTCGGTATCACGTGGTGT CAAGTCACGTGGGATGAAAGTGTGTCTGAAACATGCAAACTGCTCAAAGT TCCAATATTTCAAACGGTGATGTCCAAAACAGTGACACCATCTTGAATTA TTTACCACCGTTGCCATGGCAAGGTACTGGACATCACAGACTAACCTTCA CTTTATACCATCAAACTGAGGGACGGGTACAGGCTGACCCCATCAATGAA CAAAACTTCTCACAGCACCTACTTCGATATCTTTCACACCAAAGGAAGGT CAACTGTACACCCTCATTGTCAGCAATCTGGATGGTCATCCTGAAGGCAC TGGGGACGAGGTTCTACAATGGATGGTTATTTCTACCCCTGGAGGAGATC GAAGCCGAATGGAAGCACGAGTTTGGTATTCATGACGTCAACAAATTGAT TCGTTTCAATCAAATATCACGTGACTTGTTCCATTCAGATGACGTCATCA TGAATACGTGGTTGGATATCGCTTTCACGGATGTGAAAATACATCGAGGA AATTTGGTTCAACCCTCACAAATGTTGTCAATCCGCATTTCAATATTCGA TCACCTGATTTCAAGCTTCCAAATCCACGCGGACGTCTCGCGCGCTCCGT GTGGCGACAACGCATCGCTGAAGTACAAGCCGCGCGAAATGATCCAGAAC TAGAAAAACTGTCAAGACACAGGAAATAAAATGAAAAATCTTTTCAAAAT CGTCACCTCGCCGCTTTTGGATTCAAGTGCCCTCCATTACAGAGCGTCTA TGGTGGAGTGCTGCAGATACATCAGTAAGAAAGCACCTGCGAAGGAGGGC AAAACACGAATGATGAGGAAAGACCAAACAGATAAACACACCGAAATAAT CGAAGTTGATAAATCGGACAAACACAGATACTTCAAATGGAATTATCAAC CGCTACCCACTCAGACTTCTGAAGTTTAGACAAAATCAAAATAATATCGA TCCAATCAGAAATAAAAAAACAAAAGAAATTTGTCTGGTGAGCCTGTGTT TGAAATGGAAGAATATCTCGAGCCCAAAGTTGAGCAGGAAATGTTGATGA GAAAATGGAGTGAATTAAAATATCGAAACATGTAATATGTTGAAGAACAG ATGCATGACGTCACATGAGTTTGCAACAGCCAATCACTTACTTCCAGTCG GTATCACGTGGTGTCAAGTCACGTGGGATGAAAGTGTGTCTGAAACATGC AAACTGCTCAAAGTTCCAATATTTCAAACGGTGATGTCCAAAACAGTGAC ACCATCTTGAATTATTTACCACCGTTGCCATGGCAAGGTACTGGACATCA CAGACTAACCTTCACTTTATACCATCAAACTGAGGGACGGGTACAGGCTG ACCCCATCAATGAACAAAACTTCTCACAGCACCTACTTCGATATCTTTCA CACCAAAGGAAGGTCAACTGTACACCCTCATTGTCAGCAATCTGGATGGT CATCCTGAAGGCACTGGGGACGAGGTTCTACAATGGATGGTTATTTCTAC CCCTGGAGGAGATCGAAGCCGAATGGAAGCACGAGTTTGGTATTCATGAC GTCAACAAATTGATTCGTTTCAATCAAATATCACGTGACTTGTTCCATTC AGATGACGTCATCATGAATACGTGGTTGGATATCGCTTTCACGGATGTGA AAATACATCGAGGAAATTTGGTTCAACCCTCACAAATGTTGTCAATCCGC ATTTCAATATTCGATCACCTGATTTCAAGCTTCCAAATCCACGCGGACGT CTCGCGCGCTCCGTGTGGCGACAACGCATCGCTGAAGTACAAGCCGCGCG AAATGATCCAGAACTAGAAAAACTGTCAAGACACAGGAAATAAAATGAAA AATCTTTTCAAAATCGTCACCTCGCCGCTTTTGGATTCAAGTGCCCTCCA TTACAGAGCGTCTATGGTGGAGTGCTGCAGATACATCAGTAAGAAAGCAC CTGCGAAGGAGGGCAAAACACGAATGATGAGGAAAGACCAAACAGATAAA CACACCGAAATAATCGAAGTTGATAAATCGGACAAACACAGATACTTCAA ATGGAATTATCAACCGCTACCCACTCAGACTTCTGAAGTTTAGACAAAAT CAAAATAATATCGATCCAATCAGAAATAAAAAAACAAAAGAAATTTGTCT GGTGAGCCTGTGTTTGAAATGGAAGAATATCTCGAGCCCAAAGTTGAGCA GGAAATGTTGATGAGAAAATGGAGTGAATTAAAATATCGAAACATGTAAT ATGTTGAAGAACAGATGCATGACGTCACATGAGTTTGCAACAGCCAATCA CTTACTTCCAGTCGGTATCACGTGGTGTCAAGTCACGTGGGATGAAAGTG TGTCTGAAACATGCAAACTGCTCAAAGTTCCAATATTTCAAACGGTGATG TCCAAAACAGTGACACCATCTTGAATTATTTACCACCGTTGCCATGGCAA GGTACTGGACATCACAGACTAACCTTCACTTTATACCATCAAACTGAGGG ACGGGTACAGGCTGACCCCATCAATGAACAAAACTTCTCACAGCACCTAC TTCGATATCTTTCACACCAAAGGAAGGTCAACTGTACACCCTCATTGTCA GCAATCTGGATGGTCATCCTGAAGGCACTGGGGACGAGGTTCTACAATGG ATGGTTATTTCTACCCCTGGAGGAGATCGAAGCCGAATGGAAGCACGAGT TTGGTATTCATGACGTCAACAAATTGATTCGTTTCAATCAAATATCACGT GACTTGTTCCATTCAGATGACGTCATCATGAATACGTGGTTGGATATCGC TTTCACGGATGTGAAAATACATCGAGGAAATTTGGTTCAACCCTCACAAA TGTTGTCAATCCGCATTTCAATATTCGATCACCTGATTTCAAGCTTCCAA ATCCACGCGGACGTCTCGCGCGCTCCGTGTGGCGACAACGCATCGCTGAA GTACAAGCCGCGCGAAATGATCCAGAACTAGAAAAACTGTCAAGACACAG GAAATAAAATGAAAAATCTTTTCAAAATCGTCACCTCGCCGCTTTTGGAT TCAAGTGCCCTCCATTACAGAGCGTCTATGGTGGAGTGCTGCAGATACAT CAGTAAGAAAGCACCTGCGAAGGAGGGCAAAACACGAATGATGAGGAAAG ACCAAACAGATAAACACACCGAAATAATCGAAGTTGATAAATCGGACAAA CACAGATACTTCAAATGGAATTATCAACCGCTACCCACTCAGACTTCTGA AGTTTAGACAAAATCAAAATAATATCGATCCAATCAGAAATAAAAAAACA AAAGAAATTTGTCTGGTGAGCCTGTGTTTGAAATGGAAGAATATCTCGAG CCCAAAGTTGAGCAGGAAATGTTGATGAGAAAATGGAGTGAATTAAAATA TCGAAACATGTAATATGTTGAAGAACAGATGCATGACGTCACATGAGTTT GCAACAGCCAATCACTTACTTCCAGTCGGTATCACGTGGTGTCAAGTCAC GTGGGATGAAAGTGTGTCTGAAACATGCAAACTGCTCAAAGTTCCAATAT TTCAAACGGTGATGTCCAAAACAGTGACACCATCTTGAATTATTTACCAC CGTTGCCATGGCAAGGTACTGGACATCACAGACTAACCTTCACTTTATAC CATCAAACTGAGGGACGGGTACAGGCTGACCCCATCAATGAACAAAACTT CTCACAGCACCTACTTCGATATCTTTCACACCAAAGGAAGGTCAACTGTA CACCCTCATTGTCAGCAATCTGGATGGTCATCCTGAAGGCACTGGGGACG AGGTTCTACAATGGATGGTTATTTCTACCCCTGGAGGAGATCGAAGCCGA ATGGAAGCACGAGTTTGGTATTCATGACGTCAACAAATTGATTCGTTTCA ATCAAATATCACGTGACTTGTTCCATTCAGATGACGTCATCATGAATACG TGGTTGGATATCGCTTTCACGGATGTGAAAATACATCGAGGAAATTTGGT TCAACCCTCACAAATGTTGTCAATCCGCATTTCAATATTCGATCACCTGA TTTCAAGCTTCCAAATCCACGCGGACGTCTCGCGCGCTCCGTGTGGCGAC AACGCATCGCTGAAGTACAAGCCGCGCGAAATGATCCAGAACTAGAAAAA CTGTCAAGACACAGGAAATAAAATGAAAAATCTTTTCAAAATCGTCACCT CGCCGCTTTTGGATTCAAGTGCCCTCCATTACAGAGCGTCTATGGTGGAG TGCTGCAGATACATCAGTAAGAAAGCACCTGCGAAGGAGGGCAAAACACG AATGATGAGGAAAGACCAAACAGATAAACACACCGAAATAATCGAAGTTG ATAAATCGGACAAACACAGATACTTCAAATGGAATTATCAACCGCTACCC ACTCAGACTTCTGAAGTTTAGACAAAATCAAAATAATATCGATCCAATCA GAAATAAAAAAACAAAAGAAATTTGTCTGGTGAGCCTGTGTTTGAAATGG AAGAATATCTCGAGCCCAAAGTTGAGCAGGAAATGTTGATGAGAAAATGG AGTGAATTAAAATATCGAAACATGTAATATGTTGAAGAACAGATGCATGA CGTCACATGAGTTTGCAACAGCCAATCACTTACTTCCAGTCGGTATCACG TGGTGTCAAGTCACGTGGGATGAAAGTGTGTCTGAAACATGCAAACTGCT CAAAGTTCCAATATTTCAAACGGTGATGTCCAAAACAGTGACACCATCTT GAATTATTTACCACCGTTGCCATGGCAAGGTACTGGACATCACAGACTAA CCTTCACTTTATACCATCAAACTGAGGGACGGGTACAGGCTGACCCCATC AATGAACAAAACTTCTCACAGCACCTACTTCGATATCTTTCACACCAAAG GAAGGTCAACTGTACACCCTCATTGTCAGCAATCTGGATGGTCATCCTGA AGGCACTGGGGACGAGGTTCTACAATGGATGGTTATTTCTACCCCTGGAG GAGATCGAAGCCGAATGGAAGCACGAGTTTGGTATTCATGACGTCAACAA ATTGATTCGTTTCAATCAAATATCACGTGACTTGTTCCATTCAGATGACG TCATCATGAATACGTGGTTGGATATCGCTTTCACGGATGTGAAAATACAT CGAGGAAATTTGGTTCAACCCTCACAAATGTTGTCAATCCGCATTTCAAT ATTCGATCACCTGATTTCAAGCTTCCAAATCCACGCGGACGTCTCGCGCG CTCCGTGTGGCGACAACGCATCGCTGAAGTACAAGCCGCGCGAAATGATC CAGAACTAGAAAAACTGTCAAGACACAGGAAATAAAATGAAAAATCTTTT CAAAATCGTCACCTCGCCGCTTTTGGATTCAAGTGCCCTCCATTACAGAG CGTCTATGGTGGAGTGCTGCAGATACATCAGTAAGAAAGCACCTGCGAAG GAGGGCAAAACACGAATGATGAGGAAAGACCAAACAGATAAACACACCGA AATAATCGAAGTTGATAAATCGGACAAACACAGATACTTCAAATGGAATT ATCAACCGCTACCCACTCAGACTTCTGAAGTTTAGACAAAATCAAAATAA TATCGATCCAATCAGAAATAAAAAAACAAAAGAAATTTGTCTGGTGAGCC TGTGTTTGAAATGGAAGAATATCTCGAGCCCAAAGTTGAGCAGGAAATGT TGATGAGAAAATGGAGTGAATTAAAATATCGAAACATGTAATATGTTGAA GAACAGATGCATGACGTCACATGAGTTTGCAACAGCCAATCACTTACTTC CAGTCGGTATCACGTGGTGTCAAGTCACGTGGGATGAAAGTGTGTCTGAA ACATGCAAACTGCTCAAAGTTCCAATATTTCAAACGGTGATGTCCAAAAC AGTGACACCATCTTGAATTATTTACCACCGTTGCCATGGCAAGGTACTGG ACATCACAGACTAACCTTCACTTTATACCATCAAACTGAGGGACGGGTAC AGGCTGACCCCATCAATGAACAAAACTTCTCACAGCACCTACTTCGATAT CTTTCACACCAAAGGAAGGTCAACTGTACACCCTCATTGTCAGCAATCTG GATGGTCATCCTGAAGGCACTGGGGACGAGGTTCTACAATGGATGGTTAT TTCTACCCCTGGAGGAGATCGAAGCCGAATGGAAGCACGAGTTTGGTATT CATGACGTCAACAAATTGATTCGTTTCAATCAAATATCACGTGACTTGTT CCATTCAGATGACGTCATCATGAATACGTGGTTGGATATCGCTTTCACGG ATGTGAAAATACATCGAGGAAATTTGGTTCAACCCTCACAAATGTTGTCA ATCCGCATTTCAATATTCGATCACCTGATTTCAAGCTTCCAAATCCACGC GGACGTCTCGCGCGCTCCGTGTGGCGACAACGCATCGCTGAAGTACAAGC CGCGCGAAATGATCCAGAACTAGAAAAACTGTCAAGACACAGGAAATAAA ATGAAAAATCTTTTCAAAATCGTCACCTCGCCGCTTTTGGATTCAAGTGC CCTCCATTACAGAGCGTCTATGGTGGAGTGCTGCAGATACATCAGTAAGA AAGCACCTGCGAAGGAGGGCAAAACACGAATGATGAGGAAAGACCAAACA GATAAACACACCGAAATAATCGAAGTTGATAAATCGGACAAACACAGATA CTTCAAATGGAATTATCAACCGCTACCCACTCAGACTTCTGAAGTTTAGA CAAAATCAAAATAATATCGATCCAATCAGAAATAAAAAAACAAAAGAAAT TTGTCTGGTGAGCCTGTGTTTGAAATGGAAGAATATCTCGAGCCCAAAGT TGAGCAGGAAATGTTGATGAGAAAATGGAGTGAATTAAAATATCGAAACA TGTAATATGTTGAAGAACAGATGCATGACGTCACATGAGTTTGCAACAGC CAATCACTTACTTCCAGTCGGTATCACGTGGTGTCAAGTCACGTGGGATG AAAGTGTGTCTGAAACATGCAAACTGCTCAAAGTTCCAATATTTCAAACG GTGATGTCCAAAACAGTGACACCATCTTGAATTATTTACCACCGTTGCCA TGGCAAGGTACTGGACATCACAGACTAACCTTCACTTTATACCATCAAAC TGAGGGACGGGTACAGGCTGACCCCATCAATGAACAAAACTTCTCACAGC ACCTACTTCGATATCTTTCACACCAAAGGAAGGTCAACTGTACACCCTCA TTGTCAGCAATCTGGATGGTCATCCTGAAGGCACTGGGGACGAGGTTCTA CAATGGATGGTTATTTCTACCCCTGGAGGAGATCGAAGCCGAATGGAAGC ACGAGTTTGGTATTCATGACGTCAACAAATTGATTCGTTTCAATCAAATA TCACGTGACTTGTTCCATTCAGATGACGTCATCATGAATACGTGGTTGGA TATCGCTTTCACGGATGTGAAAATACATCGAGGAAATTTGGTTCAACCCT CACAAATGTTGTCAATCCGCATTTCAATATTCGATCACCTGATTTCAAGC TTCCAAATCCACGCGGACGTCTCGCGCGCTCCGTGTGGCGACAACGCATC GCTGAAGTACAAGCCGCGCGAAATGATCCAGAACTAGAAAAACTGTCAAG ACACAGGAAATAAAATGAAAAATCTTTTCAAAATCGTCACCTCGCCGCTT TTGGATTCAAGTGCCCTCCATTACAGAGCGTCTATGGTGGAGTGCTGCAG ATACATCAGTAAGAAAGCACCTGCGAAGGAGGGCAAAACACGAATGATGA GGAAAGACCAAACAGATAAACACACCGAAATAATCGAAGTTGATAAATCG GACAAACACAGATACTTCAAATGGAATTATCAACCGCTACCCACTCAGAC TTCTGAAGTTTAGACAAAATCAAAATAATATCGATCCAATCAGAAATAAA AAAACAAAAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00007496-exon-sc0000077-1575043694:679088..679141 | TCONS_00007496-exon-sc0000077-1575043694:679088..679141 | Clytia hemisphaerica | exon |
TCONS_00007496-exon-sc0000077-1575043694:678660..678906 | TCONS_00007496-exon-sc0000077-1575043694:678660..678906 | Clytia hemisphaerica | exon |
TCONS_00007496-exon-sc0000077-1575043694:678306..678461 | TCONS_00007496-exon-sc0000077-1575043694:678306..678461 | Clytia hemisphaerica | exon |
TCONS_00007496-exon-sc0000077-1575043694:676940..677133 | TCONS_00007496-exon-sc0000077-1575043694:676940..677133 | Clytia hemisphaerica | exon |
TCONS_00007496-exon-sc0000077-1575043694:675529..675650 | TCONS_00007496-exon-sc0000077-1575043694:675529..675650 | Clytia hemisphaerica | exon |
TCONS_00007496-exon-sc0000077-1575043694:674723..674878 | TCONS_00007496-exon-sc0000077-1575043694:674723..674878 | Clytia hemisphaerica | exon |
TCONS_00007496-exon-sc0000077-1575043694:673795..673922 | TCONS_00007496-exon-sc0000077-1575043694:673795..673922 | Clytia hemisphaerica | exon |
TCONS_00007496-exon-sc0000077-1575043694:671364..671681 | TCONS_00007496-exon-sc0000077-1575043694:671364..671681 | Clytia hemisphaerica | exon |
TCONS_00007496-exon-sc0000077-1510915933:679088..679141 | TCONS_00007496-exon-sc0000077-1510915933:679088..679141 | Clytia hemisphaerica | exon |
TCONS_00007496-exon-sc0000077-1510915933:678660..678906 | TCONS_00007496-exon-sc0000077-1510915933:678660..678906 | Clytia hemisphaerica | exon |
TCONS_00007496-exon-sc0000077-1510915933:678306..678461 | TCONS_00007496-exon-sc0000077-1510915933:678306..678461 | Clytia hemisphaerica | exon |
TCONS_00007496-exon-sc0000077-1510915933:676940..677133 | TCONS_00007496-exon-sc0000077-1510915933:676940..677133 | Clytia hemisphaerica | exon |
TCONS_00007496-exon-sc0000077-1510915933:675529..675650 | TCONS_00007496-exon-sc0000077-1510915933:675529..675650 | Clytia hemisphaerica | exon |
TCONS_00007496-exon-sc0000077-1510915933:674723..674878 | TCONS_00007496-exon-sc0000077-1510915933:674723..674878 | Clytia hemisphaerica | exon |
TCONS_00007496-exon-sc0000077-1510915933:673795..673922 | TCONS_00007496-exon-sc0000077-1510915933:673795..673922 | Clytia hemisphaerica | exon |
TCONS_00007496-exon-sc0000077-1510915933:671364..671681 | TCONS_00007496-exon-sc0000077-1510915933:671364..671681 | Clytia hemisphaerica | exon |
TCONS_00007496-exon-sc0000077-1491911889:679088..679141 | TCONS_00007496-exon-sc0000077-1491911889:679088..679141 | Clytia hemisphaerica | exon |
TCONS_00007496-exon-sc0000077-1491911889:678660..678906 | TCONS_00007496-exon-sc0000077-1491911889:678660..678906 | Clytia hemisphaerica | exon |
TCONS_00007496-exon-sc0000077-1491911889:678306..678461 | TCONS_00007496-exon-sc0000077-1491911889:678306..678461 | Clytia hemisphaerica | exon |
TCONS_00007496-exon-sc0000077-1491911889:676940..677133 | TCONS_00007496-exon-sc0000077-1491911889:676940..677133 | Clytia hemisphaerica | exon |
TCONS_00007496-exon-sc0000077-1491911889:675529..675650 | TCONS_00007496-exon-sc0000077-1491911889:675529..675650 | Clytia hemisphaerica | exon |
TCONS_00007496-exon-sc0000077-1491911889:674723..674878 | TCONS_00007496-exon-sc0000077-1491911889:674723..674878 | Clytia hemisphaerica | exon |
TCONS_00007496-exon-sc0000077-1491911889:673795..673922 | TCONS_00007496-exon-sc0000077-1491911889:673795..673922 | Clytia hemisphaerica | exon |
TCONS_00007496-exon-sc0000077-1491911889:671364..671681 | TCONS_00007496-exon-sc0000077-1491911889:671364..671681 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000077 | supercontig | sc0000077:671364..679141 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
Term | Definition |
IPR008914 | PEBP |
Blast
BLAST of TCONS_00007496 vs. Swiss-Prot (Human)
Match: RM38 (39S ribosomal protein L38, mitochondrial OS=Homo sapiens GN=MRPL38 PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 1.070e-26 Identity = 93/356 (26.12%), Postives = 165/356 (46.35%), Query Frame = 1
Query: 103 SALHYRASMVECCRYISKKAPAKEGKTRMMRKDQTDKHTEIIEVDKSDKHRYFKWNYQPLPTQTSEDVVNPH--------FNIRSP-----DFKLPNPRGRLARSVWRQRIAEVQAARNDPELEKLSRHRKLFLPLEEIEAEWKHEFGIHDVNKLIRFNQISRDLFHSDDVIMNTWLDIAFTD-----VKIHRGNLVQPSQLLTAPTSISFTPKEGQLYTLIVSNLDGHPEGTGDEVLQWMVSNISNGDVQNSDTILNYLPPLPWQGTGHHRLTFTLYHQTEGRVQADPINEQN--------MLKNRCMTSHEFATANH--LLPVGITWCQVTWDESVSETCKLLKDLSGEPVFEM 1086
+A +RA++ EC R+ A G+ + ++ +++ +K+R F Y+ + ++ PH F ++ D LP P+ + + ++ A +Q R + E E+ +R R +PL+ + AEW+ G + +L + + RDLFH + L +A+ + ++ GN V P++ AP +++ +EG L+TL++++LDGH E L W+++NI V YLPP P +G+G HRL F L+ Q + PI+ L R + +F + + P G+++ Q WD+SV+ L D+ EPVFE
Sbjct: 2 AAPWWRAALCECRRWRGFSTSAVLGRRTPPLGPMPNSDIDLSNLERLEKYRSFD-RYR---RRAEQEAQAPHWWRTYREYFGEKTDPKEKIDIGLPPPKVSRTQQLLERKQA-IQELRANVEEERAARLRTASVPLDAVRAEWERTCGPYHKQRLAEYYGLYRDLFHGATFVPRVPLHVAYAVGEDDLMPVYCGNEVTPTEAAQAP-EVTYEAEEGSLWTLLLTSLDGHLLEPDAEYLHWLLTNIPGNRVAEGQVTCPYLPPFPARGSGIHRLAFLLFKQDQ------PIDFSEDARPSPCYQLAQRTFRTFDFYKKHQETMTPAGLSFFQCRWDDSVTYIFHQLLDMR-EPVFEF 344
The following BLAST results are available for this feature:
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