TCONS_00007502 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007502
Unique NameTCONS_00007502
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length648

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007502 ID=TCONS_00007502|Name=TCONS_00007502|organism=Clytia hemisphaerica|type=transcript|length=648bp
TGCAAAGATATTTGTTACAACTGGATTGGGGTTTGATAAGTAATTTGTTA
TATTTGTGgcaatttttaatgaaattaattgAAGAAATCCGGTTTCAGTA
GTGTGAAAAACGGGCCATTTTGTGGAAATTTCACACTGAGGTGATCTCTA
TTACCGGAAGAAACAAACCTTTGATTTTGAccgatgaaagaataaaaata
tcttATAATATTTTATTAGACATGCAGTGCAGAATATTATAAAACGctta
tcaaaaatattcaagatTTATAAAAAAGTTAATATTAATTACAATATGAT
AttagatttaagattttaaattgTACAACTGAACAACTGAACAACGAATG
ATTCTTTGATTCATGAAATTAAAAAACCACCAGAAACAAAAAGGTCGCCT
CTTAGGCTGCTTTTGAACTGCTTTCCAATATAcacagaagcagccggcgg
agagattttttaaaaatatgtgttcttatcttctaggagaccaaatgtta
tatccttttatttttttatacaaatgatgtgttctgatttctactttatg
gtttgatgtgttctaaaatctaggaaagaACAGTTTGCCAAGATAAGCTT
GtaagatttttgtttttctccacgaaagatgtgttctgaaaatctTTA
Run BLAST on NCBI

transcript from alignment at sc0000077:16217..16864

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007502 ID=TCONS_00007502|Name=TCONS_00007502|organism=Clytia hemisphaerica|type=transcript|length=648bp|location=Sequence derived from alignment at sc0000077:16217..16864 (Clytia hemisphaerica)
TAAagattttcagaacacatctttcgtggagaaaaacaaaaatcttaCAA
GCTTATCTTGGCAAACTGTtctttcctagattttagaacacatcaaacca
taaagtagaaatcagaacacatcatttgtataaaaaaataaaaggatata
acatttggtctcctagaagataagaacacatatttttaaaaaatctctcc
gccggctgcttctgtgTATATTGGAAAGCAGTTCAAAAGCAGCCTAAGAG
GCGACCTTTTTGTTTCTGGTGGTTTTTTAATTTCATGAATCAAAGAATCA
TTCGTTGTTCAGTTGTTCAGTTGTAcaatttaaaatcttaaatctaaTAT
CATATTGTAATTAATATTAACTTTTTTATAAatcttgaatatttttgata
agCGTTTTATAATATTCTGCACTGCATGTCTAATAAAATATTATaagata
tttttattctttcatcggTCAAAATCAAAGGTTTGTTTCTTCCGGTAATA
GAGATCACCTCAGTGTGAAATTTCCACAAAATGGCCCGTTTTTCACACTA
CTGAAACCGGATTTCTTcaattaatttcattaaaaattgcCACAAATATA
ACAAATTACTTATCAAACCCCAATCCAGTTGTAACAAATATCTTTGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004232XLOC_004232Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007502-exon-sc0000077-1491911889:16217..16864TCONS_00007502-exon-sc0000077-1491911889:16217..16864Clytia hemisphaericaexon
TCONS_00007502-exon-sc0000077-1510915933:16217..16864TCONS_00007502-exon-sc0000077-1510915933:16217..16864Clytia hemisphaericaexon
TCONS_00007502-exon-sc0000077-1575043694:16217..16864TCONS_00007502-exon-sc0000077-1575043694:16217..16864Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000077supercontigsc0000077:16217..16864 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.0935313	0.0909159	1.3078	1.20568	4.57161	3.09623	3.55314	3.71159	2.38406	1.40445	3.84037	4.37652	0.0917787	0.197396	0.0606674	0.248729	0.515448	0.460883	0.156273	0	0.0926608	0.0842421	5.72665	8.28585	0.342606	0	0.179396	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007502 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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