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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007532 ID=TCONS_00007532|Name=TCONS_00007532|organism=Clytia hemisphaerica|type=transcript|length=772bp
TCAGGCTTTTACGATATTTATTTACAATTTAATCGGAGAAAAGTTTACTG
TGACATGGCTACAGACAGACGGAGGTGGTTGGATGATGATCACAAACTAC
ACGGCTACAGACGGACAAAGTTTTTCATCAATCAAGTATCATAACATTGA
AGGCTTCCATCTCCTTCCACAAGGTAATTTTGTCTTGGAATCCGATTAca
gaatcgattaacaatcgggCACCCATCAAAGAAATTCGGTTGGTCGTACA
GTCCTCAGTTGGCCGTACAGTCAGTGTTGTCATCTCGACATCTCACAAAT
CTGGGAAATGGATCAATGATTGGATGACTGGTAAGATGGATGCGAAAGTG
TGTGGTATATCTGATGTGGTAGGTTCGATCAGAACTCTACCAGATGATAA
CAGCCAAATATCACAAAATGCTGATTGTATTGGTTGGTATTTTTTAAGGG
TACAGCCAAAATCATCTTGTTGAACAATGGAGCGGAATGTAATGATAACA
GCGGAACGGTTTCCCCTGTAACTTGGAAATATTGGGTTCGATCTTGAATA
ATTAACGCATGCGCAATATGCCAATAGTAATCGGGAAGTTGCCACAAAGA
ATATAATATAGtgctgaaatttggcactgAGTTGGGGGGGGTATTGGAAA
CACATAATAAAACCTTGCACCTCTGGTTCCTTGGCATCatgagttatgac
gtcattatcaaTGATGGCTCCTACAAAATTAGTCAAAATTCAAGTTTAAC
ATATCAATCAATCGCAAAAAAC Run BLAST on NCBI transcript from alignment at sc0000078:4358..5521+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007532 ID=TCONS_00007532|Name=TCONS_00007532|organism=Clytia hemisphaerica|type=transcript|length=1164bp|location=Sequence derived from alignment at sc0000078:4358..5521+ (Clytia hemisphaerica)
TCAGGCTTTTACGATATTTATTTACAATTTAATCGGAGAAAAGTTTACTG
TGACATGGCTACAGACAGACGGAGGTAAACAATTTcatctttttcaaaga
ttcagTAGAAACATTTCTGATTTAGCTAAATTTAGGATTGAACTTCTACT
CTGACTCGCAAAAGGCTCAAGCATCTTCATGTCACGGAACATTCCCCATA
TAACAATCATTGTTTTCTTGAATGAATCAATTGGCTGGAAAACAATTACC
TTACCAATCGTTGTCTTGCCCAACTGTCCTTGGGTAATTCAGGTTTGGGA
CAATTAATTGTCTTTGAATCGATATACGAGACCGATCCCAAGACAAAACA
AGCTATAAAAGTGATGCTTCGAgtgttttaaagaatttttcaagctattg
gattttttttgagaaaatctttaGTATTCAAAGTGTCATTTGACAACCTG
TTTAATTTACTTTCAGGTGGTTGGATGATGATCACAAACTACACGGCTAC
AGACGGACAAAGTTTTTCATCAATCAAGTATCATAACATTGAAGGCTTCC
ATCTCCTTCCACAAGGTAATTTTGTCTTGGAATCCGATTAcagaatcgat
taacaatcgggCACCCATCAAAGAAATTCGGTTGGTCGTACAGTCCTCAG
TTGGCCGTACAGTCAGTGTTGTCATCTCGACATCTCACAAATCTGGGAAA
TGGATCAATGATTGGATGACTGGTAAGATGGATGCGAAAGTGTGTGGTAT
ATCTGATGTGGTAGGTTCGATCAGAACTCTACCAGATGATAACAGCCAAA
TATCACAAAATGCTGATTGTATTGGTTGGTATTTTTTAAGGGTACAGCCA
AAATCATCTTGTTGAACAATGGAGCGGAATGTAATGATAACAGCGGAACG
GTTTCCCCTGTAACTTGGAAATATTGGGTTCGATCTTGAATAATTAACGC
ATGCGCAATATGCCAATAGTAATCGGGAAGTTGCCACAAAGAATATAATA
TAGtgctgaaatttggcactgAGTTGGGGGGGGTATTGGAAACACATAAT
AAAACCTTGCACCTCTGGTTCCTTGGCATCatgagttatgacgtcattat
caaTGATGGCTCCTACAAAATTAGTCAAAATTCAAGTTTAACATATCAAT
CAATCGCAAAAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007532-exon-sc0000078-1491911889:4358..4431 | TCONS_00007532-exon-sc0000078-1491911889:4358..4431 | Clytia hemisphaerica | exon |
| TCONS_00007532-exon-sc0000078-1510915933:4358..4431 | TCONS_00007532-exon-sc0000078-1510915933:4358..4431 | Clytia hemisphaerica | exon |
| TCONS_00007532-exon-sc0000078-1575043694:4358..4431 | TCONS_00007532-exon-sc0000078-1575043694:4358..4431 | Clytia hemisphaerica | exon |
| TCONS_00007532-exon-sc0000078-1491911889:4824..5521 | TCONS_00007532-exon-sc0000078-1491911889:4824..5521 | Clytia hemisphaerica | exon |
| TCONS_00007532-exon-sc0000078-1510915933:4824..5521 | TCONS_00007532-exon-sc0000078-1510915933:4824..5521 | Clytia hemisphaerica | exon |
| TCONS_00007532-exon-sc0000078-1575043694:4824..5521 | TCONS_00007532-exon-sc0000078-1575043694:4824..5521 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078 | supercontig | sc0000078:4358..5521 + |
Blast
The following BLAST results are available for this feature:
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