TCONS_00007571 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007571
Unique NameTCONS_00007571
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3607

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007571 ID=TCONS_00007571|Name=TCONS_00007571|organism=Clytia hemisphaerica|type=transcript|length=3607bp
tttagaaaaaaatactttgactAGACATCAGTCATGAAGAAAAAGGGTCG
AATAATTCCCCTCtttcttttcattgaaatattgTCCATAGTCAGCGCTT
ATGAAGTGTTACCTGGGTTAGATGTTTTGAGTGCAGGATTCGATGCCGCT
TCTTGGAGCAGCAAGTCTCGTATATTTGATTTGGCAAATCAAGAACAGTC
ACAAAAAGTTTACGTTCAATCTATTGATAAGACGTACGTGGCGCCCGACT
TCGTGACGGTGGTGACGCACGGCGCACAATCAAAACGCGTGGAAGAATCC
TGTGTCGGAGTTTACACTCATTTTAGTGAGTACATTCATACGTATCAATC
CTCAGTCGGTTTCGACGTTGGTATACACACTGGCAACTTCAGTCTGGGAA
TCTCCGCTCATAAAGACGTTCACAAAATCTACGAGTCGATCACTAAAGAA
GGACAGGCTATCGGATCATCTGAATCATGGTGGGGTGTTTTCGAAGCCAC
CCTTCCTCCACCCTTCTTAATGGGCGAAAAAATGTCTCCCATGTTTCAAC
AAACTATGGCGTATTTGAACAAAATGGGCACACCTCAGACAGAAGCGCAG
CAAACTATTTACAACCAAGTGTTAGGGAGCTTTGGAACACACTACGTCAC
ATCGGTAATAACCGGAGGGCGCGCCAAAATGACCAATTTTGTTAACAGCA
GTTATCACAAGGAACATTCTGAAACAACTGTATCGACTCAAgtttccatt
ggatttgaaTGGAAGAAATTTGCTTTATCATTGTCAGATAAAgcgaaaga
ttttgaaaagaaacTGACTGAGGATTTCAGGAACAACTCCAACCAAGTCT
TAACTTTCCAACCTGATGTCAAAGAAATACATCAATCAAAAGCACCTTGG
TTAAAATGGGAACAGGTTGTGGCACAAGAACCTACTGTGGTCAACACATC
AGCAAGTAGTCTGGCAAACCTGttctttcaaaatgttgaaGTAATGAATC
ACANTGTGGTCAACACATCAGCAAGTAGTCTGGCAAACCTGttctttcaa
aatgttgaaGTAATGAATCACATGCAACAGACCATCGATTATTACACACA
GCACCAACACTTACCGAAACTGTCAGATATAAAGCCATTGAAATTGAACC
CACTTCTTCCAATAGAATCAAACAAAATCGAGTTTAGACCAGATGAAGAT
ACTCAGAAGAGCAGTCCTGCTCCAGGATTGAAGATTGTTGGGTGTGGTTT
TGATGCAACTACACTGCTTTCCAAAACCTGCTTGTTTGAATCACAATCCC
CAGATCTACCTTCGACCAAATGGCAGGATCCGTATTATCCTAATATAATA
TACGATGTCCCTTTTGgttattttgcaaCAAATACACCAGAATCCCTCCT
GGTTGATGCCACAGTGGTGATGCAATCGATTGATGATTATGTTGAAAAAT
CGGTTTACTACGAATCACACCACCACAGTGGATTTTTAGGCTTTGGCTCG
AAAACAGAGACTAAAACAACTAAGAAATATTATCAAAACTTCTATGCACA
TAACTATAAACTCGTTTTATCCCTCCGACAAATCGCATGGTACACTTTGA
GACTATCTGAGTTCCCCTTACCTAAGTTCAGTAGAACCTTTCAACAATCA
CTGGATTACTTACCAAAAACCTTCAATGCTTCAGATGCACATGGGATGAC
catctttaaaatgttctttgatGCTTTTGGCACAGATGTTGTCACATCAG
CTGACATGGGAGgcatggtatgggctgaaaACTGGTTTGAATCGTGTCTA
AGCAAGATATACTCGGATATTTGCATCACACACACTGTAAATCGTGGCTG
GTGGTTCGTCCACCATCATGATATCACGAAAAAGTGTGATAAACGTATCA
TCAATGATCTAAAGAAGTATTCAGAAGCTCATTACGAAATGCTGGGTGGA
ACTTCtggtcaaatcaaacaaaaagatTGGGATGAATGGGTTTCCAGCGT
TAAATATGATCCAAGACCGGTCAAATATAGCTTAGCTCCAATCCATTATT
TGTTGGCCGATTCTCATCCGAAGAAGAAGTCTTTGGAGGCAGCTACGCTA
CATTTCTTGAAAACAAGTCATGAGGAGCAACAGAAGTTGATTGTAGAGTT
GAAAAAAGTTAGACCACCACCTGCTAGTATCTGTAAAAAGATTCATCCGC
CCAAACTGAACGAGattCTTCAAGAAGACTACACCAAACCTTTATTAGAT
GCAGACCCCAGCGATGTATTGTGTCCGTTTGTTGGTTACCATGGTGCTTA
TTGTCCAAAAGCATTGTCCAAAAGTAATTTGAAATTCATCTCTGATAAAG
TCAAAGGTCAAAGCTCACTTCCACGCGGCGTTGGTCTCACGATCGATGTT
ACGACCGGTGAATTGAAACTTCCTGCACTGAACTACATTGATTCAAAGGA
TGAAACATGGTCTGATCCACAGACTGGTGATATCTTTAAAATCCCAGTCG
GGGTGTCATTGACTATCAATGGAACTGAATCCGAAAATAAACCGATAATC
CGAGTTTTCAAATCGGAACAAGAATTGACTTCCGTTTGGGAATCTGGATA
CAAATCAGGCACGTGGTTAGGTGGAGAATTCGGTCAAAGTAAAGGTGTCT
TGGATTTGTACACTAAATTCTTTTCCAAGCAACAAGCTACTTCGATCAAT
CAACACCCACAGAGTTTATACAAGTTATCCTTGGCAGGCGAATGGGAGAA
AAATTTGAACGATTACGTGAAATATGCGTTGAAAGCTTTGCCAGAGAAGT
ATGACGAGAATATTTACGATCGATTCATGGATACGTGGGGTACACACGTG
GCTGAGAAAACATTGGTCGGAGGTATGTCTGAGCAGCAAGTAATTATGAA
GGACTGTATGTGGCAGAACAAGTATTTAACAGGAGGAATAACCGATCCTC
AGCTTCGACAATTCTTGGAAATGGAGTTGGGAATGAAGACACCGCCCAGT
GGATATTACAAAGAACGAAGACAAATGCATATCGATCATAGAATTGGAGG
GAATCCGGAAGTTAAGGATAAAGCAACTTGGATTAAGACTTTGGGCAAAA
ATCCAGCACTGGTGAAAATATATGCTCAAGTAGAATGGTCAATAGTCGCT
GAAAAATCTGGTGTGGTCTCCAAAGCAATTGTCGCAAACTTAAAGAAAGC
TGTGCAAAATCGAATGACATTGAGTGAAAATCGACGAGTTAAGGAAGCCA
CAGAAACAGCAAAGAAGAGATTAGAATATCTCCAAGGACCTCGTTCTGTT
GTTGCTATGGTAGCACATGGCCGTAGAGGAACCATTGCGCCACAACTTGA
GACAGGTAAATACTTGACCTTGAAAGGATTCAAAGAATGTCCGCCTGGTT
TAAACATCGCGCAATCAAAATCCACCTGTAATACCGGCCTGTATATCACA
TCTTGGAACCATTTCCGATTAACGGAACCACTCCGGTATGAACGAAACGA
AAAGGGCGAAATGCGGtctgtccggtgttttgatttgGATTCCCGACGTC
AATGCATCACTCATTATGGACCCTGGGTAAGAAATGGTTGTTCACTGCAA
CCTTACG
Run BLAST on NCBI

protein sequence of TCONS_00007571-protein

>TCONS_00007571-protein ID=TCONS_00007571-protein|Name=TCONS_00007571-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1191bp
MKKKGRIIPLFLFIEILSIVSAYEVLPGLDVLSAGFDAASWSSKSRIFDL
ANQEQSQKVYVQSIDKTYVAPDFVTVVTHGAQSKRVEESCVGVYTHFSEY
IHTYQSSVGFDVGIHTGNFSLGISAHKDVHKIYESITKEGQAIGSSESWW
GVFEATLPPPFLMGEKMSPMFQQTMAYLNKMGTPQTEAQQTIYNQVLGSF
GTHYVTSVITGGRAKMTNFVNSSYHKEHSETTVSTQVSIGFEWKKFALSL
SDKAKDFEKKLTEDFRNNSNQVLTFQPDVKEIHQSKAPWLKWEQVVAQEP
TVVNTSASSLANLFFQNVEVMNHXVVNTSASSLANLFFQNVEVMNHMQQT
IDYYTQHQHLPKLSDIKPLKLNPLLPIESNKIEFRPDEDTQKSSPAPGLK
IVGCGFDATTLLSKTCLFESQSPDLPSTKWQDPYYPNIIYDVPFGYFATN
TPESLLVDATVVMQSIDDYVEKSVYYESHHHSGFLGFGSKTETKTTKKYY
QNFYAHNYKLVLSLRQIAWYTLRLSEFPLPKFSRTFQQSLDYLPKTFNAS
DAHGMTIFKMFFDAFGTDVVTSADMGGMVWAENWFESCLSKIYSDICITH
TVNRGWWFVHHHDITKKCDKRIINDLKKYSEAHYEMLGGTSGQIKQKDWD
EWVSSVKYDPRPVKYSLAPIHYLLADSHPKKKSLEAATLHFLKTSHEEQQ
KLIVELKKVRPPPASICKKIHPPKLNEILQEDYTKPLLDADPSDVLCPFV
GYHGAYCPKALSKSNLKFISDKVKGQSSLPRGVGLTIDVTTGELKLPALN
YIDSKDETWSDPQTGDIFKIPVGVSLTINGTESENKPIIRVFKSEQELTS
VWESGYKSGTWLGGEFGQSKGVLDLYTKFFSKQQATSINQHPQSLYKLSL
AGEWEKNLNDYVKYALKALPEKYDENIYDRFMDTWGTHVAEKTLVGGMSE
QQVIMKDCMWQNKYLTGGITDPQLRQFLEMELGMKTPPSGYYKERRQMHI
DHRIGGNPEVKDKATWIKTLGKNPALVKIYAQVEWSIVAEKSGVVSKAIV
ANLKKAVQNRMTLSENRRVKEATETAKKRLEYLQGPRSVVAMVAHGRRGT
IAPQLETGKYLTLKGFKECPPGLNIAQSKSTCNTGLYITSWNHFRLTEPL
RYERNEKGEMRSVRCFDLDSRRQCITHYGPWVRNGCSLQPY
Run BLAST on NCBI

transcript from alignment at sc0000078:247391..253574+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007571 ID=TCONS_00007571|Name=TCONS_00007571|organism=Clytia hemisphaerica|type=transcript|length=6184bp|location=Sequence derived from alignment at sc0000078:247391..253574+ (Clytia hemisphaerica)
tttagaaaaaaatactttgactAGACATCAGTCATGAAGAAAAAGGGTCG AATAATTCCCCTCtttcttttcattgaaatattgTCCATAGTCAGCGCTT ATGAAGTGTTACCTGGGTTAGATGTTTTGAGTGCAGGATTCGATGCCGCT TCTTGGAGCAGCAAGTCTCGTATATTTGATTTGGCAAATCAAGAACAGTC ACAAAAAGTTTACGTTCAATCTATTGATAAGACGTACGTGGCGCCCGACT TCGTGACGGTGGTGACGCACGGCGCACAATCAAAACGCGTGGAAGAATCC TGTGTCGGAGTTTACACTCATTTTAGGTAGGTCAACTTTCTTTCTTGTgg ttcaaaagaaaattgattacAATAAACGAATCTCATTCTTCAAACTTTGG AGGACATTAAAGGCCGTCTCCACTTCTCCActcaatcgcactttttggct tcaatcctttttgctttgaaaaaagattacgttatAAGAATGTTGCGCGC GCTCGAATAAAAAGTTGAACacgtttcaacttttttcaaccgttacgtca aatcgcgccaatggagttgcttcatttttcttttgacaaatagcgtggaa gctttgctcgaaaaagtgcgattgaagcgcgcacaagtggagaccggcct tacgGTCTCTTTGTTGAAATAAGCAAtcgtttgaaaatgattttttactt tatttttatgCAGTGAGTACATTCATACGTATCAATCCTCAGTCGGTTTC GACGTTGGTATACACACTGGCAACTTCAGTCTGGGAATCTCCGCTCATAA AGACGTTCACAAAATCTACGAGTCGATCACTAAAGAAGGACAGGCTATCG GATCATCTGAATCATGGTGGGGTGTTTTCGAAGCCACCCTTCCTCCACCC TTCTTAATGGGCGAAAAAATGTCTCCCATGTTTCAACAAACTATGGCGTA TTTGAACAAAATGGGCACACCTCAGACAGAAGCGCAGCAAACTATTTACA ACCAAGTGTTAGGGAGCTTTGGAACACACTACGTCACATCGGTAATAACC GGAGGGCGCGCCAAAATGACCAATTTTGTTAACAGCAGTTATCACAAGGA ACATTCTGAAACAACTGTATCGACTCAAgtttccattggatttgaaTGGA AGAAATTTGCTTTATCATTGTCAGATAAAgcgaaagattttgaaaagaaa cTGACTGAGGATTTCAGGAACAACTCCAACCAAGTCTTAACTTTCCAACC TGATGTCAAAGAAATACATCAATCAAAAGCACCTTGGTTAAAATGGGAAC AGGTTGTGGCACAAGAACCTACTGTGGTCAACACATCAGCAAGTAGTCTG GCAAACCTGttctttcaaaatgttgaaGTAATGAATCACANTGTGGTCAA CACATCAGCAAGTAGTCTGGCAAACCTGttctttcaaaatgttgaaGTAA TGAATCACATGCAACAGACCATCGATTATTACACACAGCACCAACACTTA CCGAAACTGTCAGATATAAAGCCATTGAAATTGAACCCACTTCTTCCAAT AGAATCAAACAAAATCGAGTTTAGACCAGATGAAGATACTCAGAAGAGCA GTCCTGCTCCAGGATTGAAGATTGTTGGGTGTGGTTTTGATGCAACTACA CTGCTTTCCAAAACCTGCTTGTTTGAATCACAATCCCCAGATCTACCTTC GACCAAATGGCAGGATCCGTATTATCCTAATATAATATACGATGTCCCTT TTGgttattttgcaaCAAATACACCAGAATCCCTCCTGGTTGATGCCACA GTGGTGATGCAATCGATTGATGATTATGTTGAAAAATCGGTTTACTACGA ATCACACCACCACAGTGGATTTTTAGGCTTTGGCTCGAAAACAGAGACTA AAACAACTAAGAAATATTATCAAAACTTCTATGCACATAACTATAAACTC GTTTTATCCCTCCGACAAATCGCATGGTACACTTTGAGACTATCTGAGTT CCCCTTACCTAAGTTCAGTAGAACCTTTCAACAATCACTGGATTACTTAC CAAAAACCTTCAATGCTTCAGATGCACATGGGATGACcatctttaaaatg ttctttgatGCTTTTGGCACAGATGTTGTCACATCAGCTGACATGGGAGG TAATTTATTCTaacattttctttctattttaaACGGTGAAATAAGAATAC TGTTACAGACCCTCTTTTTATGCCCTTATCTTATNCATTGGTGAGCTTTC CAGTTGATGTGATTTTTTCGATTGGAAGGATACGTTCGTTGTAGTAAAGA ATTCCATTTTTCTCAGATGAAATGTTTGCCAATCTCTTTGATGGTGTAAA TTTCTTCACTTCATGGGTTGCTTTCATAAAGAAATATTCCTGTGCCAACG CGTTGTTATCCTTTGAAGATGGTTGTGGTAGACACGACTTGAGTTTGAGG AATTTGATCACAAGAGCAAGAGTTGAGGTGGCTTTCTTCCAACCATATTT GTTAGGATCAATGATGTATNCTTGAATCGGCGCACAGGGATGACATAATC CGGTCCTTGAGAGGGCTTTAATACTTACAATCGAGGAGTTCTAAAGTTTA CCTTTATCATTTCTTCGTGTaggcatggtatgggctgaaaACTGGTTTGA ATCGTGTCTAAGCAAGATATACTCGGATATTTGCATCACACACACTGTAA ATCGTGGCTGGTGGTTCGTCCACCATCATGATATCACGAAAAAGTGTGAT AAACGTATCATCAATGATCTAAAGAAGTATTCAGAAGCTCATTACGAAAT GCTGGGTGGAACTTCtggtcaaatcaaacaaaaagatTGGGATGAATGGG TTTCCAGCGTTAAATATGATCCAAGACCGGTCAAATATAGCTTAGCTCCA ATCCATTATTTGTTGGCCGATTCTCATCCGAAGAAGAAGTCTTTGGAGGC AGCTACGCTACATTTCTTGAAAACAAGTCATGAGGAGCAACAGAAGTTGA TTGTAGAGTTGAAAAAAGTTAGACCACCACCTGCTAGTATCTGTAAAAAG ATTCATCCGCCCAAACTGAACGAGgttagtttgtttacattcatcAGGCC GTTTCACGGTCGGAATGAACCATAGATAATCAGGACTGTAAAGTAAatag taagtatattcatctggtggctgtcggctatccccttttctatttgcgct agacctgggagatcgaatgctgaggtggagcgccacacctactctcagct ctcagtaacttaccgcctagatcagattacccaatctaagctactcatct gctgagttggcggtgaccggggatcgaacccacaacccttagattaTAAG GCAAATGccctaccgactgagctacccggacacaaatcaggactgattgc caACAACAAACTTCCGGTTGGTTAaacacaaaaatgacaaaagtcGTTAT GAGAGCgcggtggtcctgattacccatgattacTTTCGACCGTGAAATTG CCTATTATAGTCAGTGTCGGACGTTTGATGAAAAGCATCACATATCATTA CGctataaatttttttctattgatACTTTTCTGGCGAAAAGATTAGTTAA CATGATAAGAAACACGACATTAACTTTTTAAGATCACGCAATCTTTTAAG CCAGTGAGCTAAAACATTAACGAGTTTATGTAACGGAGAcagtaaggttc taatttgactagatcctgaccagctgaggacgaaggtaaatcagcacttt taccgtccacGATTTTGTGGGTCAGAAGTGCGGGTTTTTTTCcgaatcgc ttcagtcactctatcGTCCTCAAAagagcaaatacataaactcgctatta tgaATTCACATCCAAATGGAAACACCGATGATATTATTCTTTTTGTTTGT TCTGCTTTGTCATTAAAAGATGCGTGGTTGATTtaaatataatcaaaaat gtttttagattCTTCAAGAAGACTACACCAAACCTTTATTAGATGCAGAC CCCAGCGATGTATTGTGTCCGTTTGTTGGTTACCATGGTGCTTATTGTCC AAAAGCATTGTCCAAAAGTAATTTGAAATTCATCTCTGATAAAGTCAAAG GTCAAAGCTCACTTCCACGCGGCGTTGGTCTCACGATCGATGTTACGACC GGTGAATTGAAACTTCCTGCACTGAACTACATTGATTCAAAGGATGAAAC ATGGTCTGATCCACAGACTGGTGATATCTTTAAAATCCCAGTCGGGGTGT CATTGACTATCAATGGAACTGAATCCGAAAATAAACCGATAATCCGAGTT TTCAAATCGGAACAAGAATTGACTTCCGTTTGGGAATCTGGATACAAATC AGGCACGTGGTTAGGTGGAGAATTCGGTCAAAGTAAAGGTGTCTTGGATT TGTACACTAAATTCTTTTCCAAGCAACAAGCTACTTCGATCAATCAACAC CCACAGAGTTTATACAAGTTATCCTTGGCAGGCGAATGGGAGAAAAATTT GAACGATTACGTGAAATATGCGTTGAAAGCTTTGCCAGAGAAGTATGACG AGAATATTTACGATCGATTCATGGATACGTGGGGTACACACGTGGCTGAG AAAACATTGGTCGGAGGTTAGTTTTATATTATTAGTTGCCGAAAACCTAG ATTAAAAGTTTTACTgtgagaaaaaataatataatttggATAGTCGTCTT GTGGATgttcaaaagaaaataacagACACCTTTTCTCATAGGTTTCGGAC ACTGAATCCTTTAATACCTACGAGGAGCACTCTACTAACTTACTTAATCT AGCCAAGATAACAATTCTATTTCATTTTCTCTCAAAGGTATGTCTGAGCA GCAAGTAATTATGAAGGACTGTATGTGGCAGAACAAGTATTTAACAGGAG GAATAACCGATCCTCAGCTTCGACAATTCTTGGAAATGGAGTTGGGAATG AAGACACCGCCCAGTGGATATTACAAAGAACGAAGACAAATGCATATCGA TCATAGAATTGGAGGTAAACGCTTATTGTACAAGCATTTTTTTACTTGTA AAGTTTTAACAAATCTTTAGACATCTTGATGATAGCACAGATGACAAATG TGTTGAAGACAGTGGGGTCAGCACTAAAATCCTGGACATACTAAAAGGAA TTTCGAGAATTTCTTGCATACCACCACCCCATTTTGgagaagtggtattt tagtacctATGTACTAAAAGTTAGAGGGAAATTTTGACACATAGACCACc caatttttgtattttcaggACAAATTTTGTCTTGTCGGAACCATTTTTCT CAAGAGTGGTGAAATTGCAACAGAAtgttcatttttctcaaaaattgata cttttaaaCAATGAAGCTTTATAAATTGAGCAAACATTAAAGACATTTGA CTTGACCatacaaatttaaattttttgaaaaattgcaaaaattctgaata aaaaatcataaaattatgaaaattactAATTTTAGTATCAGGAAAATTGG CCGTATTAATACCGTCATTCTGATTTTACCACAGGGAATCCGGAAGTTAA GGATAAAGCAACTTGGATTAAGACTTTGGGCAAAAATCCAGCACTGGTGA AAATATANATTCTGATTTTACCACAGGGAATCCGGAAGTTAAGGATAAAG CAACTTGGATTAAGACTTTGGGCAAAAATCCAGCACTGGTGAAAATATAT GCTCAAGTAGAATGGTCAATAGTCGCTGAAAAATCTGGTGTGGTCTCCAA AGCAATTGTCGCAAACTTAAAGAAAGCTGTGCAAAATCGAATGACATTGA GTGAAAATCGACGAGTTAAGGAAGCCACAGAAACAGCAAAGAAGAGATTA GAATATCTCCAAGGACCTCGTTCTGTTGTTGCTATGGTAGCACATGGCCG TAGAGGAACCATTGCGCCACAACTTGAGACAGGTAAATACTTGACCTTGA AAGGATTCAAAGAATGTCCGCCTGGTTTAAACATCGCGCAATCAAAATCC ACCTGTAATACCGGCCTGTATATCACATCTTGGAACCATTTCCGATTAAC GGAACCACTCCGGTATGAACGAAACGAAAAGGGCGAAATGCGGtctgtcc ggtgttttgatttgGATTCCCGACGTCAATGCATCACTCATTATGGACCC TGGGTAAGAAATGGTTGTTCACTGCAACCTTACG

Coding sequence (CDS) from alignment at sc0000078:247391..253574+

>TCONS_00007571 ID=TCONS_00007571|Name=TCONS_00007571|organism=Clytia hemisphaerica|type=CDS|length=3573bp|location=Sequence derived from alignment at sc0000078:247391..253574+ (Clytia hemisphaerica)
ATGAAGAAAAAGGGTCGAATAATTCCCCTCtttcttttcattgaaatatt
gTCCATAGTCAGCGCTTATGAAGTGTTACCTGGGTTAGATGTTTTGAGTG
CAGGATTCGATGCCGCTTCTTGGAGCAGCAAGTCTCGTATATTTGATTTG
GCAAATCAAGAACAGTCACAAAAAGTTTACGTTCAATCTATTGATAAGAC
GTACGTGGCGCCCGACTTCGTGACGGTGGTGACGCACGGCGCACAATCAA
AACGCGTGGAAGAATCCTGTGTCGGAGTTTACACTCATTTTAGTGAGTAC
ATTCATACGTATCAATCCTCAGTCGGTTTCGACGTTGGTATACACACTGG
CAACTTCAGTCTGGGAATCTCCGCTCATAAAGACGTTCACAAAATCTACG
AGTCGATCACTAAAGAAGGACAGGCTATCGGATCATCTGAATCATGGTGG
GGTGTTTTCGAAGCCACCCTTCCTCCACCCTTCTTAATGGGCGAAAAAAT
GTCTCCCATGTTTCAACAAACTATGGCGTATTTGAACAAAATGGGCACAC
CTCAGACAGAAGCGCAGCAAACTATTTACAACCAAGTGTTAGGGAGCTTT
GGAACACACTACGTCACATCGGTAATAACCGGAGGGCGCGCCAAAATGAC
CAATTTTGTTAACAGCAGTTATCACAAGGAACATTCTGAAACAACTGTAT
CGACTCAAgtttccattggatttgaaTGGAAGAAATTTGCTTTATCATTG
TCAGATAAAgcgaaagattttgaaaagaaacTGACTGAGGATTTCAGGAA
CAACTCCAACCAAGTCTTAACTTTCCAACCTGATGTCAAAGAAATACATC
AATCAAAAGCACCTTGGTTAAAATGGGAACAGGTTGTGGCACAAGAACCT
ACTGTGGTCAACACATCAGCAAGTAGTCTGGCAAACCTGttctttcaaaa
tgttgaaGTAATGAATCACANTGTGGTCAACACATCAGCAAGTAGTCTGG
CAAACCTGttctttcaaaatgttgaaGTAATGAATCACATGCAACAGACC
ATCGATTATTACACACAGCACCAACACTTACCGAAACTGTCAGATATAAA
GCCATTGAAATTGAACCCACTTCTTCCAATAGAATCAAACAAAATCGAGT
TTAGACCAGATGAAGATACTCAGAAGAGCAGTCCTGCTCCAGGATTGAAG
ATTGTTGGGTGTGGTTTTGATGCAACTACACTGCTTTCCAAAACCTGCTT
GTTTGAATCACAATCCCCAGATCTACCTTCGACCAAATGGCAGGATCCGT
ATTATCCTAATATAATATACGATGTCCCTTTTGgttattttgcaaCAAAT
ACACCAGAATCCCTCCTGGTTGATGCCACAGTGGTGATGCAATCGATTGA
TGATTATGTTGAAAAATCGGTTTACTACGAATCACACCACCACAGTGGAT
TTTTAGGCTTTGGCTCGAAAACAGAGACTAAAACAACTAAGAAATATTAT
CAAAACTTCTATGCACATAACTATAAACTCGTTTTATCCCTCCGACAAAT
CGCATGGTACACTTTGAGACTATCTGAGTTCCCCTTACCTAAGTTCAGTA
GAACCTTTCAACAATCACTGGATTACTTACCAAAAACCTTCAATGCTTCA
GATGCACATGGGATGACcatctttaaaatgttctttgatGCTTTTGGCAC
AGATGTTGTCACATCAGCTGACATGGGAGgcatggtatgggctgaaaACT
GGTTTGAATCGTGTCTAAGCAAGATATACTCGGATATTTGCATCACACAC
ACTGTAAATCGTGGCTGGTGGTTCGTCCACCATCATGATATCACGAAAAA
GTGTGATAAACGTATCATCAATGATCTAAAGAAGTATTCAGAAGCTCATT
ACGAAATGCTGGGTGGAACTTCtggtcaaatcaaacaaaaagatTGGGAT
GAATGGGTTTCCAGCGTTAAATATGATCCAAGACCGGTCAAATATAGCTT
AGCTCCAATCCATTATTTGTTGGCCGATTCTCATCCGAAGAAGAAGTCTT
TGGAGGCAGCTACGCTACATTTCTTGAAAACAAGTCATGAGGAGCAACAG
AAGTTGATTGTAGAGTTGAAAAAAGTTAGACCACCACCTGCTAGTATCTG
TAAAAAGATTCATCCGCCCAAACTGAACGAGattCTTCAAGAAGACTACA
CCAAACCTTTATTAGATGCAGACCCCAGCGATGTATTGTGTCCGTTTGTT
GGTTACCATGGTGCTTATTGTCCAAAAGCATTGTCCAAAAGTAATTTGAA
ATTCATCTCTGATAAAGTCAAAGGTCAAAGCTCACTTCCACGCGGCGTTG
GTCTCACGATCGATGTTACGACCGGTGAATTGAAACTTCCTGCACTGAAC
TACATTGATTCAAAGGATGAAACATGGTCTGATCCACAGACTGGTGATAT
CTTTAAAATCCCAGTCGGGGTGTCATTGACTATCAATGGAACTGAATCCG
AAAATAAACCGATAATCCGAGTTTTCAAATCGGAACAAGAATTGACTTCC
GTTTGGGAATCTGGATACAAATCAGGCACGTGGTTAGGTGGAGAATTCGG
TCAAAGTAAAGGTGTCTTGGATTTGTACACTAAATTCTTTTCCAAGCAAC
AAGCTACTTCGATCAATCAACACCCACAGAGTTTATACAAGTTATCCTTG
GCAGGCGAATGGGAGAAAAATTTGAACGATTACGTGAAATATGCGTTGAA
AGCTTTGCCAGAGAAGTATGACGAGAATATTTACGATCGATTCATGGATA
CGTGGGGTACACACGTGGCTGAGAAAACATTGGTCGGAGGTATGTCTGAG
CAGCAAGTAATTATGAAGGACTGTATGTGGCAGAACAAGTATTTAACAGG
AGGAATAACCGATCCTCAGCTTCGACAATTCTTGGAAATGGAGTTGGGAA
TGAAGACACCGCCCAGTGGATATTACAAAGAACGAAGACAAATGCATATC
GATCATAGAATTGGAGGGAATCCGGAAGTTAAGGATAAAGCAACTTGGAT
TAAGACTTTGGGCAAAAATCCAGCACTGGTGAAAATATATGCTCAAGTAG
AATGGTCAATAGTCGCTGAAAAATCTGGTGTGGTCTCCAAAGCAATTGTC
GCAAACTTAAAGAAAGCTGTGCAAAATCGAATGACATTGAGTGAAAATCG
ACGAGTTAAGGAAGCCACAGAAACAGCAAAGAAGAGATTAGAATATCTCC
AAGGACCTCGTTCTGTTGTTGCTATGGTAGCACATGGCCGTAGAGGAACC
ATTGCGCCACAACTTGAGACAGGTAAATACTTGACCTTGAAAGGATTCAA
AGAATGTCCGCCTGGTTTAAACATCGCGCAATCAAAATCCACCTGTAATA
CCGGCCTGTATATCACATCTTGGAACCATTTCCGATTAACGGAACCACTC
CGGTATGAACGAAACGAAAAGGGCGAAATGCGGtctgtccggtgttttga
tttgGATTCCCGACGTCAATGCATCACTCATTATGGACCCTGGGTAAGAA
ATGGTTGTTCACTGCAACCTTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004277XLOC_004277Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007571-proteinTCONS_00007571-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007571-exon-sc0000078-1491911889:247391..247716TCONS_00007571-exon-sc0000078-1491911889:247391..247716Clytia hemisphaericaexon
TCONS_00007571-exon-sc0000078-1510915933:247391..247716TCONS_00007571-exon-sc0000078-1510915933:247391..247716Clytia hemisphaericaexon
TCONS_00007571-exon-sc0000078-1575043694:247391..247716TCONS_00007571-exon-sc0000078-1575043694:247391..247716Clytia hemisphaericaexon
TCONS_00007571-exon-sc0000078-1491911889:248104..249539TCONS_00007571-exon-sc0000078-1491911889:248104..249539Clytia hemisphaericaexon
TCONS_00007571-exon-sc0000078-1510915933:248104..249539TCONS_00007571-exon-sc0000078-1510915933:248104..249539Clytia hemisphaericaexon
TCONS_00007571-exon-sc0000078-1575043694:248104..249539TCONS_00007571-exon-sc0000078-1575043694:248104..249539Clytia hemisphaericaexon
TCONS_00007571-exon-sc0000078-1491911889:250013..250464TCONS_00007571-exon-sc0000078-1491911889:250013..250464Clytia hemisphaericaexon
TCONS_00007571-exon-sc0000078-1510915933:250013..250464TCONS_00007571-exon-sc0000078-1510915933:250013..250464Clytia hemisphaericaexon
TCONS_00007571-exon-sc0000078-1575043694:250013..250464TCONS_00007571-exon-sc0000078-1575043694:250013..250464Clytia hemisphaericaexon
TCONS_00007571-exon-sc0000078-1491911889:251349..252006TCONS_00007571-exon-sc0000078-1491911889:251349..252006Clytia hemisphaericaexon
TCONS_00007571-exon-sc0000078-1510915933:251349..252006TCONS_00007571-exon-sc0000078-1510915933:251349..252006Clytia hemisphaericaexon
TCONS_00007571-exon-sc0000078-1575043694:251349..252006TCONS_00007571-exon-sc0000078-1575043694:251349..252006Clytia hemisphaericaexon
TCONS_00007571-exon-sc0000078-1491911889:252228..252404TCONS_00007571-exon-sc0000078-1491911889:252228..252404Clytia hemisphaericaexon
TCONS_00007571-exon-sc0000078-1510915933:252228..252404TCONS_00007571-exon-sc0000078-1510915933:252228..252404Clytia hemisphaericaexon
TCONS_00007571-exon-sc0000078-1575043694:252228..252404TCONS_00007571-exon-sc0000078-1575043694:252228..252404Clytia hemisphaericaexon
TCONS_00007571-exon-sc0000078-1491911889:253017..253574TCONS_00007571-exon-sc0000078-1491911889:253017..253574Clytia hemisphaericaexon
TCONS_00007571-exon-sc0000078-1510915933:253017..253574TCONS_00007571-exon-sc0000078-1510915933:253017..253574Clytia hemisphaericaexon
TCONS_00007571-exon-sc0000078-1575043694:253017..253574TCONS_00007571-exon-sc0000078-1575043694:253017..253574Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000078supercontigsc0000078:247391..253574 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0417631 0.0101814 0.0236432 0.0231311 0.01408 0.0222524 0.711433 1.63367 3.37852 6.24529 2.03096 1.48805 5.27731 5.06229 2.18766 7.27212 1.24622 1.21306 1.64262 2.82222 0.121137 0.147716 0.418991 1.06659 6.61378 5.32238 0.0715819 0.0458365 1.64556 0.99177
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR020864MACPF
IPR020863MACPF_CS
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007571 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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