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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007594 ID=TCONS_00007594|Name=TCONS_00007594|organism=Clytia hemisphaerica|type=transcript|length=3322bp
TGGTTCGAGATGAACAACCTACCTACAAAATTAACAAACTTTACTGACTT
TCGATTACTTCATGAAAACGTCATTTTTAAAAGGATTCATTCACTCGACA
TCATCAATAAATGGatgataaaaatgaaatgatgCATCATGAGTGAATTT
GTTGAAGATGATGACAATGATAAAGTCAGAGCTGCTATAGTTGCCCGATA
TGAACGTGGTCCTGAAGGCCCCATTGAACCCTGGGAAGATgctagtttta
ttgtttatcAAGTGTGTGACCGATATGGGTTTCTTCACAAGAACCCTCTC
CCTCaatatgaaaaagatgaaaaggTGATGGAATTGGAGAGAGAACGagc
caaaaaatggctgaaaatgattgcTGGATGGGAGACATATTTTATTGATA
ATAAAGTCTCTGAAAAGCTCCGGAGACGTGTTTATAAAGGAATACCTGAT
AGCATAAGAGGTAGTGCCTGGAAAATGATGTTGAACATTGATCATGTGGC
AAAAGCAGGCGTCTATACACGTTTTAAGAATATCGCCTTAGAAAATAGTC
CTGATATTCGACAAATTGATTTAGATGTCAATAGGACTTACAGGGACCAC
ATAATGTTCAGGGACAGGTTCTCGATAAAACAGCAAGCATTGTTTAATGT
TTTAGCTGCATATTCTCTTTACAACACTGATGTAGGTTACTGCCAAGGAA
TGAGTGGTATAACTGCATTATTGTTGATGTACATGAACGAAGAAGATGCT
TTTTGGGCTCTTTCAGAACTTTTGAATGATAAGAAACATGCTATGCATGG
ATTGTTTATACCTGGATTTCCAAAGTTATTGAGGTTACAAGATCAtcatg
ataaaattttgaagaagttTTTACCAAAGATATACAAGCATCTTGATCGT
GAAGGTGTCAATACAAGTTTGTATACGTTGAAATGGTTTATGCAATGTTT
TCTGGATCGATTACCGTTTTCATTAGTGCTTAGATTGTATGATGTTTTTA
TATTGGAGGGTGATCGCATTTTAACTGCTATGGCTTACCATATTTTAAAG
ATGTTTCGAAAGCAAATATTGAAGATGGATTTAGAGGGTATTGCTCCTTT
GTTACAAGAAGATGTACCTGGATATAATTTTGATAACGATGAAATAATGG
AATCACTCCAAGAAACTATAGCTgaattaaaacgtggaaaacttgaTAAA
GCCCCTCCACCTACTGAGGCTGAACAACCAAGCAAGCCACTAGGTACGTT
ACCTCAGCGCAATTCGTACATCACTGCATCTAAAAGGGCTAGAAGTATAG
GTGATCGTAAAAGCACAATCGAAGTCCCAATGGGTCGCCCTCCCTCGCCA
ACACCTTCAGATAAGAATCACGCAAATGGAAACACCTCACCTGAGCAAAT
TGAATACAAAGGGCTTGTTATTAAACAGCCGAAAACACATGTGATCACAC
AACCAGCACCTAATCACTATGATCGCAAGGGGAGCTCTCCTCAACCTCTA
CCTTCCTATTCAgagtttattgaaaagaaaaatcagctGCAAAACCAAAT
ATCAGGACATTCAGACACTTCATCGTTTGGTCAAAGGAGTCCACCCTTAC
GTTCGGTTCCTCCGCCAGCAAGTTCTCCATTTTCACCACCAGCAGGTTCA
CCCTCTCGTAATAGTCCAATTCTTGTAAGAAGCTCCATGAAAGTTGATaa
gaagtccaaaaaaggtaaaaaagaaaatgacagtAAGTTTTATGTGGAAG
ACACTGTTGATTTCCATTCAAGCTATAGCATCAGTTCTTCCAACTTTAGC
GAGCAAATGTATCGCGGCCCAAGCCCTACCTCACCGACTATATGGTCTGC
AGAGGTGCAAAGCTCTCGTGGATACACAACATCAGTATCATCATCTGAAG
ACCAACGATCACCAAGACCAAATGGTTATTCAGGCCCTAAAATGCCCCCT
CGAGATTATGATGACGATGACGAGGAATTGCATCATTCAAAttcgagaaa
aattaaaaacaggaAAGGTACAACTCATAGAGTTTTGAATAGTGATGGTT
TGAGACCTAACGAGGCTGCAAATGAGACACGATTATAATAGTATTATTTT
TggactttatatattttttgaaaagagaaattaGGGAGCCACTTTAAGAT
TAAACTTTAGGCTTAATATTAGGTAGATTGTACCCATACTAAAGATTCTA
TGAatactttttgcttttgttctttcttaaaaaacttaaacCTGCATCCT
ACTTGACTGAAGCTTTGATGATTTGATAAagtgtttttattatttttttg
gtctatttttttttagataaagCACTTTTGATCAAACCTCAATAGACCCC
TTAATCTATTTCAAATTCTATTTTAACTTCGTTACATATGTATGTTATTA
TATAATAAGTAATTTTATTATGTTGACGTAAATGATTGCTTTACCAGTAA
GCTGAGCATTTGatattgaaacttgaaattcgCTGTTACTACCAAAAGCT
GTTTTTATCGACGTTCTGACCAAAATTTGTGGAAGAATTgagttttgttt
tcattttgagaaaatgcaAATGGCCGTTTTGTACAAATACTTTAGATATT
TTCTAGTTTTCATATAATAAGGATATTATTAGCGATAATATTATGAATAA
TTTCTTATGTAAATAAATTAATTTCGAGATTCTTGAGTATTTTccaacat
tattattattattatgtaaCTGTTTATATTTTCCCTTGatcattatattt
ttttgttgttatGCTTAAGTTcactttttcaaatcttttgttgAACATTT
TAGGGATTAcatttgattttgaagaaaGGTGGTATCAGGGAATAATGTTC
TCTTTTGTTTTCATCTTGATAAGATGGAAAGTATACATTTGGCTGTGAaa
tttatcttcttttttttttgcacaaaaagagGGCGAGAGGGAGAATGAAT
TTGAGAATTTAGAGGCAGATGTCTTAGTTTTTCCTTCGTTTTCTTTCGAA
ATGTATTTCTGTGGAATGGACGGTAGTCTATTTATAACAAACAtggtatt
tttcttttattctttaatcTAAGTTTCAATATCATCggtaaattttaaaa
accaaCTGTCAACTTTCTCGTTTTCGTATCAAACTATTTGTCTCATAGTA
ATGTTTACACATTATGTAATTGGATCTCATCCAACTCTCTATAATGAAAT
ACGTGCAGAAACAAGCAATTAATCGACTACAACTCAAGCATTGACAAAAT
TGACATCATAAATCCTTTTATAACCGTCCTCTCTTTTTTTGCATTGTAAG
CTAGAAAGACATTCTCGAAATT Run BLAST on NCBI transcript from alignment at sc0000078:500190..514365+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007594 ID=TCONS_00007594|Name=TCONS_00007594|organism=Clytia hemisphaerica|type=transcript|length=14176bp|location=Sequence derived from alignment at sc0000078:500190..514365+ (Clytia hemisphaerica)
TGGTTCGAGATGAACAACCTACCTACAAAATTAACAAACTTTACTGACTT
TCGATTACTTCATGAAAACGTCATTTTTAAAAGGATTCATTCACTCGACA
TCATCAATAAATGGGTATATCTTTAATCGTTATTAAGTTCTagctttttt
tctttgaattaaacGCAAATCTTTCTAATTTTACTGCTTTAAAGGATCGA
AAGTTAGACTAAAAAAAAGGTTCAAAAGCAGTTATATAAGTGATAAGGTC
AAGTTTGTTGAGCGCTATAAACCATACTTCCTCAGACAGAAAGAAGACAG
CAGGGGTGACTTTGATGCTGTAGCTTAGTCGATACAAGCTTTTTATCAta
tctgtttttttctttttaacttttataaaTGTCAGGCGGCAGGGATAGCC
ATTCCtgggtcaaattgaaactattctgatggcaatcaaacctagttcat
cttgtagagcttcaaaaaagaaaaaaaatgaggggNTTTCAAAATTAATA
ACGCTAAGCTATATTCTATTTGCCATACTGAAGACGTCAGtagtttcatt
caaaaacagcaaaagaaTTATGCAGGACATGTTGTTCGAATGTCTGTAGT
AGATCGTGGTATTAAACAGTTAATGTTTAATTCCGATAAATATCATAGAA
TCGGAAGAACAACTCCCTCTCTTCTCTAGAGTAGGTGTTGTCAGATAACA
ATTTTTTATGATTAAAGTTTGACTTAGGTCCCATTTACTAGTTACAGTAT
ATATGTGAGGAGAAACGCTCTTTCGAATTTCGTGAATCAAAACCTTCCCT
TCATCCGCCACCAACGCCCTCCTTTGGTTCGGTCGGCGTTCCGTGTTCCG
CGCTTCTTGCGCTCgctaaaatgacgtcataaattgaTTCCGGCCGTGGG
TTTCCATTTTGTAAGGGTCGTGGTTCGAGATGAACAACCTACCTACAAAA
TTAACAAACTTTACTGACTTTCGATTACTTCATGAAAACGTCATTTTTAA
AAGGATTCATTCACTCGACATCATCAATAAATGGGTATATCTTTAATCGT
TATTAAGTTCTagctttttttctttgaattaaacGCAAATCTTTCTAATT
TTACTGCTTTAAAGGATCGAAAGTTAGACTAAAAAAAAGGTTCAAAAGCA
GTTATATAAGTGATAAGGTCAAGTTTGTTGAGCGCTATAAACCATACTTC
CTCAGACAGAAAGAAGACAGCAGGGGTGACTTTGATGCTGTAGCTTAGTC
GATACAAGCTTTTTATCAtatctgtttttttctttttaacttttataaaT
GTCAGGCGGCAGGGATAGCCATTCCtgggtcaaattgaaactattctgat
ggcaatcaaacctagttcatcttgtagagcttcaaaaaagaaaaaaaatg
aggggtcatacacctcctaatgataagNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNggaccctgccgacgcaccggactgtc
cggtgtatttgtccggtggcaaaaagtatcctttcgctacaccggacgca
ataagtccgatgtcagtccggtgttgcaNtgtgaacattttttcctccgc
agcgctttgaaatcaaagatgagttgtgaaattttttgtgtcccgcagat
ctaatttttctaaaaaatggccttagttgaaacaaatttttagacaaaag
tgtagaatattacacctgcatattatatatggttggaaagctaaaagaaa
gctcNGCCGGACATttacgaaacaaaaaattaagaaacatcggacgcacc
ggactggtcatgtccggtgttttgattgtccggtggaaaaaaatatcctt
ctccgacaccggacatccgacttccttaagtNNNNNaaatttttagacaa
aagtgtagaatattacacctgcatattatatatggttggaaagctaaaag
aaagctctaaattactcaaaaataattaatttcatAGCTCaacaaagaac
aattgcttgtcaaagtttgacctaaaattgaagattttgataagcgtcaa
ataaaaaacaagcaaacctgGAATTGCTAGCAGGGAAACAGAACTAAAAC
CTACCGTGagaaggaccctgccgacgcaccggactgtccggtgtatttgt
ccggtggcaaaagtatcctttcgctacaccggacacaataagtccggtgt
cagtccggtgttgaatacagggaattttggacgccggacatttacgaaac
aaaaaattaagaaacaccggccggacgcaccggactggtcatgtccggtg
ttttgattgccCGGTGGGAAAAagtatccttctccgacaccggacatccc
atttccttaagtccggtgtagaaattgtccggtggtaaaaaaaattctca
ttttacaccggactttcgtcgcgtgtccggtgttcgttaagtccggtgcg
tcggcagggtcctccgtgagattgggtaacttgcatcagtggagggaggc
taacatgcatagccttcaaatgactgaccaatctaagcagcaaaatttca
aaacaaatgaactacgcagctctgcttgcagctctactctaccatttatg
ttttgatttaactttgtatatattttaatgaccaattttaatgaccagcc
aggtcattcatttctgagggctatgcatgttagccttcactgatgcaagt
taagttacctgatctcatgGCAGCATGGTCAATTCCCTGACTGATTGCAg
tataaacgtcacttttacatttttcattcaAGGAGAAAATACGATGGCCC
Ctatagtctggagatccatactctctattcaaacttacagctactcattg
agagtatggtatttttgacccagtttgaatttctATATATACATTTGGTT
TGAActttgtgccaaaaaagccattgataaggttagccaatcagattcat
gcacttccaatcaaaacaataatatcacgtgatttcaacaattgttttaT
AGCCaatagaatagaccttttcgcctttccatctgccatcttgaattgta
tgcaaaaatagaggaacgaaaaagccgtggttggatttaattggaaagta
tgcaaaacatatgcaattttactcaaagattaaaaagacaacaaagcatc
ttataaataaatactataatcattagaacaataaaagatggaatttctta
atccaaaaagaaatattcacagaacaacaaaagccttttagaaatttgtt
cttaaagacatagcatattctgttttcatgccattaagaaattccatgaa
ggcggagtacacacatcaaactttcaaaacacgcaatctgaaagcagtaa
ttatgaggtcacacattatcaatgttttgatttgatcatttggtgGCTCT
ATTCCCAgaagaataatttaccgtcagccgaataaggatcattttttacc
ttcgttggtgatttttcagtttgagtttatgtctaatgttatggattTTT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccctaacatggttag
tcccccctagccacagtgaaaaatcaggtaccaattgctgctcgaccttt
tagccctccctcaggccaggggggggttccagccatgaaagcaatcagta
gaagaaacAAACCACtttagtttttgttgcagattttgatttattaaaCT
TCTCACAGGGATGTTTTGTCAATGGGTTGTGCCAACTTGTCAGCTGTATT
GATGCAAAGGCTGATAAAAGAGatactagcctagtttctaatcctgatgt
AGGAGTTTAAGTCTAGACTGCTAGGCTAGACCTACCTCTTTTCTCTTTCC
TATTCCAACAATACAATGCTTAATAAGTTGACACACGTTGACTCGTGCAa
tgtttatatcaaaatctgcattaaaacgaaagtagtcttccttttttaaa
tttcaacaatGAGATTGCTGCGTACATGCTGCGTATATGTTGGGACTCAA
TAAAATCGCTAAAACAAGGACTTACAAAACCAAGGCAAGTCAACGAGAAA
ATGATGACCAAAAGCGATGGTACCAAATGTAAGTCTGCAGAAGAAAATGC
AGAGGTGTTTAAAGTCCATTTCGAACAACTATACGACCGTAAACCAACTT
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccctaac
atggttagtcccccctagccacagtgaaaaatcaggtaccaattgctgct
cgaccttttagccctccctcaggccaggggggggttccagccatgaaagc
aatcagtagaagaaacAAACCACtttagtttttgttgcagattttgattt
attaaaCTTCTCACAGGGATGTTTTGTCAATGGGTTGTGCCAACTTGTCA
GCTGTATTGATGCAAAGGCTGATAAAAGAGatactagcctagtttctaat
cctgatgtAGGAGTTTAAGTCTAGACTGCTAGGCTAGACCTACCTCTTTT
CTCTTTCCTATTCCAACAGTACAATGCTTAATAAGTTGACACACGTTGAC
TCATGCAatgtttatatcaaaatctgcatTAAAACAAAAGTAGTcttcct
tttttaaatttcaacaatGAGATTGCTGCGTACAATAAAGTTTAACAGCC
AGCTGCTTTCTTATTTTTAGTTCTCAAATGAAAGTGGCAATTTGATGTGA
GCCTTATTTTTTCAAGGAACCCtctctgattggatgaaagcgCTTTCATT
TATTTATCACTTCATTTATTTGGATACTTCTTTTTAAACAATTACACAta
cgattttaagaaaaaagtaGACAAGAATCAATTTACTGTCAGTTTCATCT
TTTATTTCGAATCATCagctaattttttgaaaaactacaTACTTCTTTCT
TATAAGAttgatttatgaaaatttgaattagaaATGTGATTTGATACCTA
AGGGAATaatgacaatttataattggcTAGTAATTTGCATGATATTTAAA
GTGTAATCTTTTAGAAGAAAGATCAATTTTGCTTCTCTAGAAAACCATAA
TTATATCTTCTCATTCCTTAAGACCAGcccttcaaaaaaccataactaGA
CCCAAACTTAAGCTGAGAAATCAGCAACAAAGGTGCAGGAATAATCCTTA
TTCAGCAGACaaaaaattattctcctgggaagaGCACGACAAAATGACTT
GTATTTTAGATCAAAACATTGAACTTGAGGCTGAAGATGGTCCAAAGAAT
AAGGAGTTGTTAAGAAACTACTTGAACTTCCACAAATTTAAGAAAACCTA
AACTaaacaaaagtggtctcttctactcaGTGCTTCCTTAAGCCAGTCTA
TTGGAAAGTCCTACCGCACACATATGATGTTACCCAAATGATAAATGACG
GGCTGtgaaaaacattgaacatgtacctaatcaatgttttttgacctaTT
AGTGATAATGGGGTCCCCAAATTTAGCattgtttttttaaattagcAATT
TGTATGATAAAACATCtttaagaaattttcaaattgactTTTTGATTGTT
TAGAATCAATCCTTTTGAAAGTGAGTTCCTATTAGCAAGTGCTTGTTATA
TTTCATGAAAtacaagtttatttttcttctatcATTTGTGTTGAAGAATT
AGTAAACAGAATGTACCGGGTGTTTCAAATAAAGTGTACAAGTTTGAAGT
GAGGTTGCGAGAAAAGTAAAAATGTTATATATTAATTCAAACTTTTCGCC
ATTCAAAGGAGGAAAGGCtaactaaaattttgagctaGATCATACTTGCT
TTTGCTTCACACATTCAAAAGTTATAAACTAATAAAGACTATTCGAAAAa
atactctttcaaaaaaaccGTCTAACAAATATGTTTCTAGTTGATTTGCC
ATTTTTTAGGGattcaaatattcaaatatttttaggtCTCTTATTAACCC
TTTAAACATTGAAAAACATGTATATACATCCAAAATCTCCATTCCAAGAC
TTTTGGCCATAGTTCTTAACCACTTGATTTTTACTTTCTTAGAAGGAATA
TTAAAGATTGCTTTCTAAATGATACCAAAATGAGCTCATGACATTCCATG
CTATAAGCTTTTATGGCATATATAATCTGTAATTTCATAAGAaatattaa
aaagaaatcaactttttcaaaaaaaacaacaggGCCCAAGCCCAAAAGGT
TAATGCAGATtcaaagtatttagaaaataGAGAGATCTGTATATAGGGGG
TGAAACACAAATAAGGGTTTAGACTCCTTTCCAGACTCCTTTCCACACTA
TGGTTGACTGGAATTTTTCACAGGGAAGTGGTAAtaagatttttaagatt
gttgaAGATTATATTTTCAAACACTTACAACATAAACTTAACCAAACAGC
ATATTCTGtagttttttgcaaattttggacCTTCAGAATCATTTTTTAAA
CAAGTGAAGAACAAGAACTCTGTTAAGTTCTTTAAATTAACTTATGTCTA
TATTCTCTATAACACAAGTCGTTTCATGCAATATACAAATTTGGATCGAA
ATTGAAGTCCCTAGTTTAAGTCGAAGAATTAATTTGGATTTGAACTAATA
TTAACTGTAAATCAGTCGATATAATATTGTACTAGAacattgttgaaaat
tttttcttagtttCCCTCTCCTAGGAATAATTTATAATAGTGGAACTAGT
TTTGTGAATCACTATTACTAAATTGTTGATGAACTTATTTATTTGACAGC
GAAACTGAGTGACAGAGTAAATTGTTTAAAGTTTTGTCATTAAAATGCAC
AGTAATTGGCATTGATTTAGTTAATTGCCAGCAAAATTGACTTTTACTTC
CTGAAGATAATATATAATCTATAAGCTATGtcataatttttgttttctga
GCCACTGCCTTCTTGTAATATTTATGtttgttgaattttgaaacaggtca
gaaaaactttttgttatacTTCAGTgacaaatttggtatttttattctAA
TTAAAGGCATTTTAGATTGTTTTACATTATATGTAAATGTAGTGTTATTA
AAAGTTGGTTGTCATTCATCAAGTTTATTTTTTCTCGTTTTGTGGCTTAC
CAAATATTGATTCTGTGGTGTCTTATTACTGTACGTTCTAtctcattttt
tttcaagtcagaaataTTGCATGATTAATAGATGTATTATTGTTGTTGGT
AAAGCAAAGATTTGTAAACTTGAGTTCTTATTTAATTGATAATAAGTAGA
AATATGATAAATGCAGCTAAATGGTACAATCTTTTAAGACTTAAACTCCA
ACTTTGCTTATTTCTTagatgataaaaatgaaatgatgCATCATGAGTGA
ATTTGTTGAAGATGATGACAATGATAAAGTCAGAGCTGCTATAGTTGCCC
GATATGAACGTGGTCCTGAAGGCCCCATTGAACCCTGGGAAGATgctagt
tttattgtttatcAAGTGTGTGACCGATATGGGTTTCTTCACAAGAACCC
TCTCCCTCaatatgaaaaagatgaaaaggTGATGGAATTGGAGAGAGAAC
GagccaaaaaatggctgaaaatgattgcTGGATGGGAGACATATTTTATT
GATAATAAAGTCTCTGAAAAGCTCCGGAGACGTGTTTATAAAGGAATACC
TGATAGCATAAGAGGTAGTGCCTGGAAAATGATGTTGAACATTGATCATG
TGGCAAAAGCAGGCGTCTATACACGTTTTAAGAATATCGCCTTAGAAAAT
AGTCCTGATATTCGACAAATTGATTTAGATGTCAATAGGACTTACAGGGA
CCACATAATGTTCAGGGACAGGTTCTCGATAAAACAGCAAGCATTGTTTA
ATGTTTTAGCTGCATATTCTCTTTACAACACTGATGTAGGTTACTGCCAA
GGAATGAGTGGTATAACTGCATTATTGTTGATGTACATGAACGAAGAAGA
TGCTTTTTGGGCTCTTTCAGAACTTTTGAATGATAAGAAACATGCTATGC
ATGGATTGTTTATACCTGGATTTCCAAAGTTATTGAGGTTACAAGATCAt
catgataaaattttgaagaagttTTTACCAAAGATATACAAGCATCTTGA
TCGTGAAGGTGTCAATACAAGTTTGTATACGTTGAAATGGTTTATGCAAT
GTTTTCTGGATCGATTACCGTTTTCATTAGTGCTTAGATTGTATGATGTT
TTTATATTGGAGGGTGATCGCATTTTAACTGCTATGGCTTACCATATTTT
AAAGATGTTTCGAAAGCAAATATTGAAGATGGATTTAGAGGGTATTGCTC
CTTTGTTACAAGAAGATGTACCTGGATATAATTTTGATAACGATGAAATA
ATGGAATCACTCCAAGAAACTATAGCTgaattaaaacgtggaaaacttga
TAAAGCCCCTCCACCTACTGAGGCTGAACAACCAAGCAAGCCACTAGGTA
CGTTACCTCAGCGCAATTCGTACATCACTGCATCTAAAAGGGCTAGAAGT
ATAGGTGATCGTAAAAGCACAATCGAAGTCCCAATGGGTCGCCCTCCCTC
GCCAACACCTTCAGATAAGAATCACGCAAATGGAAACACCTCACCTGAGC
AAATTGAATACAAAGGGCTTGTTATTAAACAGCCGAAAACACATGTGATC
ACACAACCAGCACCTAATCACTATGATCGCAAGGGGAGCTCTCCTCAACC
TCTACCTTCCTATTCAgagtttattgaaaagaaaaatcagctGCAAAACC
AAATATCAGGACATTCAGACACTTCATCGTTTGGTCAAAGGAGTCCACCC
TTACGTTCGGTTCCTCCGCCAGCAAGTTCTCCATTTTCACCACCAGCAGG
TTCACCCTCTCGTAATAGTCCAATTCTTGTAAGAAGCTCCATGAAAGTTG
ATaagaagtccaaaaaaggtaaaaaagaaaatgacagtAAGTTTTATGTG
GAAGACACTGTTGATTTCCATTCAAGCTATAGCATCAGTTCTTCCAACTT
TAGCGAGCAAATGTATCGCGGCCCAAGCCCTACCTCACCGACTATATGGT
CTGCAGAGGTGCAAAGCTCTCGTGGATACACAACATCAGTATCATCATCT
GAAGACCAACGATCACCAAGACCAAATGGTTATTCAGGCCCTAAAATGCC
CCCTCGAGATTATGATGACGATGACGAGGAATTGCATCATTCAAAttcga
gaaaaattaaaaacaggaAAGGTACAACTCATAGAGTTTTGAATAGTGAT
GGTTTGAGACCTAACGAGGCTGCAAATGAGACACGATTATAATAGTATTA
TTTTTggactttatatattttttgaaaagagaaattaGGGAGCCACTTTA
AGATTAAACTTTAGGCTTAATATTAGGTAGATTGTACCCATACTAAAGAT
TCTATGAatactttttgcttttgttctttcttaaaaaacttaaacCTGCA
TCCTACTTGACTGAAGCTTTGATGATTTGATAAagtgtttttattatttt
tttggtctatttttttttagataaagCACTTTTGATCAAACCTCAATAGA
CCCCTTAATCTATTTCAAATTCTATTTTAACTTCGTTACATATGTATGTT
ATTATATAATAAGTAATTTTATTATGTTGACGTAAATGATTGCTTTACCA
GTAAGCTGAGCATTTGatattgaaacttgaaattcgCTGTTACTACCAAA
AGCTGTTTTTATCGACGTTCTGACCAAAATTTGTGGAAGAATTgagtttt
gttttcattttgagaaaatgcaAATGGCCGTTTTGTACAAATACTTTAGA
TATTTTCTAGTTTTCATATAATAAGGATATTATTAGCGATAATATTATGA
ATAATTTCTTATGTAAATAAATTAATTTCGAGATTCTTGAGTATTTTcca
acattattattattattatgtaaCTGTTTATATTTTCCCTTGatcattat
atttttttgttgttatGCTTAAGTTcactttttcaaatcttttgttgAAC
ATTTTAGGGATTAcatttgattttgaagaaaGGTGGTATCAGGGAATAAT
GTTCTCTTTTGTTTTCATCTTGATAAGATGGAAAGTATACATTTGGCTGT
GAaatttatcttcttttttttttgcacaaaaagagGGCGAGAGGGAGAAT
GAATTTGAGAATTTAGAGGCAGATGTCTTAGTTTTTCCTTCGTTTTCTTT
CGAAATGTATTTCTGTGGAATGGACGGTAGTCTATTTATAACAAACAtgg
tatttttcttttattctttaatcTAAGTTTCAATATCATCggtaaatttt
aaaaaccaaCTGTCAACTTTCTCGTTTTCGTATCAAACTATTTGTCTCAT
AGTAATGTTTACACATTATGTAATTGGATCTCATCCAACTCTCTATAATG
AAATACGTGCAGAAACAAGCAATTAATCGACTACAACTCAAGCATTGACA
AAATTGACATCATAAATCCTTTTATAACCGTCCTCTCTTTTTTTGCATTG
TAAGCTAGAAAGACATTCTCGAAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007594-exon-sc0000078-1491911889:500190..500303 | TCONS_00007594-exon-sc0000078-1491911889:500190..500303 | Clytia hemisphaerica | exon |
| TCONS_00007594-exon-sc0000078-1510915933:500190..500303 | TCONS_00007594-exon-sc0000078-1510915933:500190..500303 | Clytia hemisphaerica | exon |
| TCONS_00007594-exon-sc0000078-1575043694:500190..500303 | TCONS_00007594-exon-sc0000078-1575043694:500190..500303 | Clytia hemisphaerica | exon |
| TCONS_00007594-exon-sc0000078-1491911889:511158..514365 | TCONS_00007594-exon-sc0000078-1491911889:511158..514365 | Clytia hemisphaerica | exon |
| TCONS_00007594-exon-sc0000078-1510915933:511158..514365 | TCONS_00007594-exon-sc0000078-1510915933:511158..514365 | Clytia hemisphaerica | exon |
| TCONS_00007594-exon-sc0000078-1575043694:511158..514365 | TCONS_00007594-exon-sc0000078-1575043694:511158..514365 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078 | supercontig | sc0000078:500190..514365 + |
Blast
BLAST of TCONS_00007594 vs. Swiss-Prot (Human)
Match: US6NL (USP6 N-terminal-like protein OS=Homo sapiens GN=USP6NL PE=1 SV=3) HSP 1 Score: 436.032 bits (1120), Expect = 4.204e-136 Identity = 209/364 (57.42%), Postives = 270/364 (74.18%), Query Frame = 1
Query: 178 RAAIVARYERGPEGP-IEPWEDASFIVYQVCDRYGFLHKNPLPQYE-KDEKVMELERERAKKWLKMIAGWETYFIDNKVSEKLRRRVYKGIPDSIRGSAWKMMLNIDHVAKA--GVYTRFKNIALENSPDIRQIDLDVNRTYRDHIMFRDRFSIKQQALFNVLAAYSLYNTDVGYCQGMSGITALLLMYMNEEDAFWALSELLNDKKHAMHGLFIPGFPKLLRLQDHHDKILKKFLPKIYKHLDREGVNTSLYTLKWFMQCFLDRLPFSLVLRLYDVFILEGDRILTAMAYHILKMFRKQILKMDLEGIAPLLQEDVP-GYNFDNDEIMESLQETIAELKRGKLDKAPPPTEAEQPSKPLGTLP 1254
RA IVA+Y+RG EG IEPWEDA ++VY+V DR+GFLH+ LP + E+ LE ER KWLKM+ GWE Y K +EK RR+YKGIP +RG W ++L I + + +Y++ K+ A SPDIRQIDLDVNRT+RDHIMFRDR+ +KQQ+LF+VLAAYS+YNT+VGYCQGMS ITALLLMYMNEEDAFWAL +L + KHAMHG F+ GFPKLLR Q+HH+KIL KFL K+ +HLD + + TS YT+KWF QCFLDR PF+L LR++D++I EG+R+LTAM+Y ILK+ +K ++K+ +E + QE + + F++D ++E LQ ++ ELKR KLD P E E P KPLG LP
Sbjct: 15 RAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPDHNVAVERQKHLEIERTTKWLKMLKGWEKY----KNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFFQETLAKDFFFEDDFVIEQLQISMTELKRAKLDLPEPGKEDEYPKKPLGQLP 374
The following BLAST results are available for this feature:
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