TCONS_00007600 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007600
Unique NameTCONS_00007600
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2761

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007600 ID=TCONS_00007600|Name=TCONS_00007600|organism=Clytia hemisphaerica|type=transcript|length=2761bp
TCTAGGACAAGTGTAGTTTAAAGTTTAAGGAAAAATAATACAAAAGAATG
GCAGTATCAAAGGTTTTCAGTCCTGGGGATTTAGTTTGGGCAAAAATGAA
AGGTTATCCACATTGGCCAGCACGggTGGATGAGCCACAACCAGGGCAAG
TCATACCAAAAAAGAAATATCTCATTTTCTTCTTCGGTACCCACGAAACT
GGTTTCTTACCAGCTGATGGGttatataattttgaaaaacacaaagaaaa
atggTTCAAGCCAAACAAGCGAAGAGGATTCCCAGAAGCGTTAGATGAAA
TTATTAACAATCCAACTGTTGTTCATGTTGAAGCACCTCCTGATGAACAC
CCGTCATCAGAAAGTGAACCGGAAGAAGGAGCAGATGGGGATGCAGAGGG
TGCCAAACCACCTccacagaaaaagaaaaagcCTGCTCCACCAAAACGAA
AAAAGCCACAAGAGCCaaagaaaagtaacaagaaaGTGCGAGCAGTCAAA
TCACAAGATGAAattgatgatgaagatgatTGGAGTGATTCTGATGATGA
AGCACTCAAAATTGATgaaccaaaacaaaagaaaaaaCCAGAGGATTACG
AAAGTTTTGAAGAACCGACATCCTCCTCTTCTTCAGAGAGCGAAGATTCT
GGTGAGGATTATGTACCagaagaaattgaaaagaaaaagaagccaCCTGC
AAAGCGGGCTCCTGCCAAAAAGGCTGCACCTAAGAAACCGCCTGCTGAGA
AAAAACCACGTGCCAAAAAGGAACCATCAGAAAAGAAACCACGAAAAGCG
CCACAAAAGAAACCTGCAGCCAAAGCTAAGAAAAGTACGAATGATGGATC
GGATAGTGTGAGTTCAATCAGTTCCAGTAGTTCTGACGACAGTTCGGATG
ATGATATTGAACAACTGAGAAAGAAAATACTGAACAAAAATACCGAATTA
ACAGAAGAAGAAAAAGCCGCCCAAGAGAAACGAGCGGAAGAAGCGCGTGT
ACGCGATGCAGAACGACAACGCCTGGCGGAAGAAAGTCGAATCAGGAGAG
AACAACTAAAAAAAGAACGCgaagaagagaagaaaaagaaaaaagaGAAA
AAGAAAGCGGCTGCATCAGATGACTCAGATGGATCTTCAAAaagcgaaag
cgaaagtgatcaggaagaagtcgttgcaaagaagaagaaaaagaatgtga
cgtcatccaagaagaagaaagaagaggAGGCGAAGAAAGAAAGCACTGAC
GAAGAGGAAGAGAAAGATGAGAATGAGGAAGAGAAGATTGAGGAACCAGA
AGAAGAAGAGACAGAGGAAGAGAAACAACGTAAAGAGGAAGAACGAAAAC
AAAAGGAAGAGGAGAAGAAACGAAGGGACGAAGAGCGTAAGAAAGCGCAA
GCAGAGAAGAGAAAACAACGCGAAGAAGAGAAGAGGAGAGAGAAGGAGga
acgaaaaaaagaaaaagaggatAGGGacaaaaaacgaaaagaaaaagcTG
AACGCAAAAAggaattggtgaaaaaagaaaaagagatcaaagaagaaaaa
cgaaaGAGTAAAGAGAAATCTGACGAAAAGAAAAAGGAACGATTGGAAAA
AGCGGATGATGCATTTAACAGGATAGCCACTGAGAGCAAAACTACCGGTA
TTGCTGAACGACTACACGAGTTGGAAGTTGAACTGAAACGAGCACTTTCC
TTGAAAGAACACGATCACGAGCGTTGTTTAAAAGCATTACAAAACATCTC
CGACTTGACATTAACACCCTCCATATTGATGAAAAACAAAACGATCGTAC
CCACCATAAAAAAGGTTCGCGCATACAAAGCCAATCAGGAGGTGAGCGAT
AAAGCTTCCAAGCTATACAACAAATTCAAAAGTCTTTTCGCTGTTGCAAC
GCCAGCAAAAGGCACAATCACAAAACCCGCTGTCATGACACCAGCCACGC
CTGCACCTCCGCAAGATGGCAGTACGGTCGTCACGACAACGCAATCAAAC
ACACACGTACAGATCAATATAAGTATCAATTCGAATGGAGAGAACACGCC
TTCAGTTTCCATTAGTACCCCACCAACATAGAGAATAGACTTGTTGAACC
GAAGAAGAAGTGACGTCATGAAGATTTATTTAGCCATGCAAGGTGTAGTG
TAAATATTATTGTCTTTTCCTGTCAAATATTTTACTAAACATTTAGGGTT
CTTTTCTACAGAGGCCTTGTTTTGGGGCATTTTCCGTAACTTTAATAATT
TCATGCGCGTGTTCTGTCGGCTTGCTGAGATAGAAAGACCCTTGCTGAGA
CTTTCCTACAAAACAAGTCTTACTGGACTCACAATTTGTAGCAATGAATC
AAAAATCGGATAAAATCGGGCGTGCGTACTATAATCCATTCTATTTATCA
TAGACCGgtttatttctaattatttttatcaaaagatgaaTTTATCTTAT
CAAATACACCGTGAGCAATTATTGACTTAGCACCTGAACTTGAAAAGTAA
GCTGTAAAGCAGAAACTTCAGTCGTCCATTTTCTTTGAGCCGTGTCACGC
TTTTGTTTGgtatcttttcatttttcacgaACCACTCTTCGACTATGTTT
GAGTTCTTCTGTCTATATCCTTGTCAATtctcttcaaacatttttttgct
agtCTCTACTTAATGTATTTAGGTTTGCTATCCATTACTAGTATGTCTAA
Tattatttttaggtttttacggtagttttaatttttctgagattttttaa
aagtaaagttt
Run BLAST on NCBI

transcript from alignment at sc0000078:556691..572199+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007600 ID=TCONS_00007600|Name=TCONS_00007600|organism=Clytia hemisphaerica|type=transcript|length=15509bp|location=Sequence derived from alignment at sc0000078:556691..572199+ (Clytia hemisphaerica)
TCTAGGACAAGTGTAGTTTAAAGTTTAAGGtttgttttgagtttttttgc
aTAATAATGAGCTATGAAGTACAGCCACACAACAGGATATACTAGGTTTT
GTAAGATGAAATTTTTCCCTGaaaaaatgggccattccagaatttgtctt
gTAACAACAGGGgaggggggcggacgacacaggatttctgaggacaaaag
ttttcaccaaaattcgaaatttccaaggcgagagaagaaaatgtatgaat
ttccaaggcaattgaattaaaaaaggcaaaaaagagtggaatttccgatg
cattttgcaaaagtacatggatttttatcagaatttccgaccaccactga
aaaagaaaaattatttctgaggctagaaaaaattaaaaaatgcacgtcgt
ccgaacgggggggggtaacaaaaattttctggaatggcccaattggtaac
ttgcatcagtggaggttCATTtgagagggctatgcatgttagcctccact
gatgcaagttacccactcccGCGGTATCATTCGTTAAAAAAAGCTACATT
GTCTGTTGTCTTGCATCTTGTCTTGTCCCTGggcgtgagattgggtaact
tgcatcagtgttAGTGGAGAGGCTAACATGCCAtgcataccgtaagttgg
tctaatgtcgacatccgtcttctaattccgacacccttctttagagatag
gaacaatagaaactgaggaaggtcagaatcgctgattgactttgattagc
gccatgagaggaaaaatcacgacccacggcatggcccgaacatgtttggG
CCTCTTGagtaatactttttaaaaatggcccgcgcagtttcggaccatgt
tcgggccacagatctgtaaaacccgaagagctagatttgcggcttttatc
gaaaagtgaagcctaggtttggaaggatttcctaccaaagtcacgtgact
aaaatatgcaatttcactggtttaagagatgtgaaatagcgtttgccgcc
tatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCGctctga
aaacaattaaaatgctagatcctatccatcggcacgaaatttaaaaagtc
aaatttttgcttcacttttttttgctggagaaagcttaatattgcctatc
tagcccttcgggctttactgATATCTGTggttcgggccagattttcgaaa
acttgctacgatcgcgcgtgtaatttcaggacccaatatttatatttcaa
attccttattctagcaaacaaatttaaaaatcttcatctttattcaaata
tataNNNNNNNNtagcaaacaaatttaaaaatcttcatctttattcaaat
atatactgttcaaatataaaagttaatcatctattttccaattaagttag
gaaaattattaaaaaggatgatttgaatcttacataatatggtcttcttt
ttattctttatctcattcccttttctcgtggtcttctcctattcgaagca
gaatttttctgaatcattttttgtactgttatacaactttgtgaatcaaa
ctggtatttggaactttgaatttgtctaatgaaaatatttaacaatggat
gatgataaaccaggaaaggtaaataaaattaaattctactacTTAAaggt
ccgaacaaaatgttcgggccgattcaataatacttttttgtggcccgagc
aggGTCAGAACAGgaccgaacatgttcgggccatgccgtgggtcgtgaaa
aatctttagtctatcagtgatttcaacatttttcttattcctatctataa
agaaggatgtcggaattagaagacggatgtcgacattagaccaacttacg
gtagccctcaaatgaatgacctggctggtcattaatgTAAAAAGTGAAAT
TGGTAGAGTAGAGCCCAGTTTCCTGCAGAGTATGGCAAAAATCATCGAGA
TCTTGGTAAGATCTCGGGGGCATTTTGATGATGATATCTACATTTCAGGC
AGGGgcaaaattattgaaaactGGCTTTTTTGAGGTGGGAAACAGATCTG
AGTATGCAGGAAATCgctgtttttctggattttcattggactttttcctt
ataattggttgtcttttcattcaaaaacattattaatagcaatgcccatc
ATCAAGCATgtatcaattttcaataaaattgatttttgaagccagaacta
tttaaaaatcgccggaacaacctatttttgccagaaagacaatatttttt
tgaatttctcaagctgtactttatatttttttatgaaattttgcacactg
ataaTACAAAATGACAATACTTAAAATgcgacggagcccaattttcgaaa
aacatttttttccatccaaaaatgccggaaatatgccggaaaaaccggtt
ttttgacattttctcgaattttcatttttagttttttctttttttttgca
gaaagatgtgtattcgcaatgctcaaaacatggccgagtttgatttgaaa
aaaacaatttccgggtaaaaatgccggaaatcgctgtttttgcattggat
tttttccttatttctatgttttccacacaaaaacattattgataacaatg
ctcaccatcaagcgtgatttaattgtcaataaaactgatttttgtgacca
gaactttctatttatttttgcccttgacccttccctctcccccatcaaca
atcaatgatcatagttcggacccccccccccctttttcccttttttggaa
ggtgtcatcccccccccttaagaaaggggggggggggccccccccaaaaa
aaaatgaagttcatagttcgggccccccccccctttcttaaaGGAGGGGG
ATGAgaccttccaaaaaagtgaagaagggggggggtcagaaattttcatt
aaaaagggggatagcaaggagggAGGAttgtttaagaagggggggggctc
acatatattgtagattattttcaagcactgttaAGAAATTTGGTCTGCct
gaaaggaagttctttattttcactaaaaagtggtatcATATTTGccagat
ttaatttttctttactgtttcctttccctttttaccataaaaaatttagc
ccaaaacccttggggataggcatttttaagaGTTGGGgagatgccaagaa
ggggggggggggtcagacccctttccgcactatgatgattaatttattgc
gttatgcatttttgctaaatgctatattttctgaccaattttttttcatt
tttctcctcgcattactatctaactttcatcatcaggtaggtccaatcgG
CATCTAGCTTGTTGTTGTTTATAGTCGTTAGATAATAACTTTTTCAAGGA
TAAATTGATCACTAAGGGATCACATGTGTCATGTGAGACCAATTGATAAT
AACAGAAGGTTATCCATTATTTCAATCTATGACATCTATTCTCAGGGGGG
CACTAGGATAATTATTAaattaaagtcaaaatttacgaaaatttTCTAAT
CTTCCCAACTTTAAAGACTCTTCTCAcgtttcattcattttattgTATAC
ACTCCCTGCAATGTCTTGAGAATTTTGTAATTACGTCacgtttacacgtt
tttttgaaagtgacgtattaggTTGAAAACTCGAGAAAAGTCATAATCTC
GGAGGAGTTTGAAGGGTGCATTCATAAGTTACAGGTTACGTTATGCTCTA
TTGTTCTGTTtacaaaaatggtttcaaattttacatccaggcagcttttt
taattctttttgtatCAGCCAATGAAATGGCTAGATAAGAGATCAAATGT
TTTGTTTGGAAAAGTTTGAATTGTTAAGATTAACTCTTCCTTGGATTTCT
TGTACACAAAGACATCCTTCTTGATTCACAGAAACGACAGTTGGTAAATT
ATTCTTGTTTagattaaaaatcaaataaagtTACTGCTAGAGTTCCAGAC
AGAGGACAGAGGAGattcttttttactttgtttAACATGTAGCTCTGTAA
TATTTGTGAAGGGGTGAAAAGTCACAAAGCTCTGTTGTATCGCTtttttg
ttctgtaaatatCCCATTCTTATTTCGACTAGAATTAGATATATGTTTCC
ATTCTAATCgattaaaattcaaaagatgTATAATCGATTAAAGATTATAA
TTGTGTCAAAGATAAGCcaaaaaggattaattaatcgaatacaGGGATTA
AATAACCGAAGCTATTCGACTAAATGACTGCAGCTATTTGATTAAATAGT
CAAGTTTTGGTATTTAATTTGTATATAAATGCACATAAGACTAGAAACAT
CCAATTGTCTACATTTGCATTTGCAATAAATGTCTGCATTTTCATACAGG
AAGTAGCTCCTCCTCAAGAGTATAGTAACATTCATAATTTGAAGTATGCC
CAGATACAAACCATGTTGACAAATAATCTAAATATAACTGCATGTAATGA
TTAAATTTCGAGTCACTTTCTTCTTGCTCTGTTTAAATCTTACAAAAAAc
gattttctaaatttgattaaatttagtGAATGGAAGGTCTAAAAACTTGT
CAAATTGAATACTCTCGAGAAAAGATTGCATGCAAAAAATATCATCTTTT
GTTGCATTTGTTTTTTTGATAGGAAAAATAATACAAAAGAATGGCAGTAT
CAAAGGTTTTCAGTCCTGGGGATTTAGTTTGGGCAAAAATGAAAGGTTAT
CCACATTGGCCAGCACGggtaatttaaattttcataatgTTGTATTGATA
TATGACTATGCTATGAATAGCTAATAGCTCAATGCTACCAAAAGATTTAC
AAAAAGTTGTTTTACTAATTTACTAATTATACAGAgtttaacattttttt
catgtttAAGTATTTAGTTATTTGACATTTTCGaattctttttataaatt
taaagatatttttatctTGGCAGGTCACATTTTaagataatttcattttt
tatatctttatctttttattttccaggTGGATGAGCCACAACCAGGGCAA
GTCATACCAAAAAAGAAATATCTCATTTTCTTCTTCGGTACCCACGAAAC
GTAAGGAGttatctttctttttaaagGATTAATGTTGAGAATTTAGTTAG
TAAAGACATAAAGAGATACTAAGACTAAAGACTTATTGCTTTGTCATGGT
CTTAGCAAACTATAACATGCAtccagtgctgcaaataaggaatTTCAAGT
TGGCCGGTGATTACTCAATCAGAAAGCACTAATAATGAAACCATCAAAAT
TTCACGGGAAAAAACACGCATCATTAATTAATTTCGTTACTACAACCAAA
CACACAGCTGTACACAAAATGTTATCAAAGTATCTTCATGAGCAGCacct
gaaaaacttttttatatttcaatatttttaacatcAAAAGCGTGACATTC
TTTTGTATCAATCTTCTGTTTTTCTAGTGGTTTCTTACCAGCTGATGGGt
tatataattttgaaaaacacaaagaaaaatggTTCAAGCCAAACAAGCGA
AGAGGATTCCCAGAAGCGTTAGATGAAATTATTAACAATCCAACTGTTGT
TCATGTTGAAGCACCTCCTGATGAACAGTTAGTAACTAATTTGCTTTGAA
TTCTCTTTACTTCTACATGCATTTAAATTATTGGATGCCAATTAAGGACT
TGATTTTAAATTTGGGCATCCATTAAGAAGGCTCCTCATTTAACATATCT
CCTCCCATTTTGCTTATACACAGGATTTTTTCATAAAGAAAGGTTGACGA
CTTTCCAAACACTAGCCACAAAAGTTATTCTGTTAATTCTGCTTTTTATG
AATGATCACTAATAAATAATGGTACTTGAGAGATGACATTTCTTTGTTGA
ATTTGGGCGAACATCTACAATCTTCCTTTCAACTTAAATTTTAGCCCGTC
ATCAGAAAGTGAACCGGAAGAAGGAGCAGATGGGGATGCAGAGGGTGCCA
AACCACCTccacagaaaaagaaaaaggtttatattcatttaaaagAATAA
TCTTTGTATTTTGGTGATAAGCTACTCATGTTTTTGTAAATCGTAGATTG
AGGCTTCTGAATGCAATCTACCCAAAGTGGGATACCCCAATAAAACATTT
CATGATAATTTATACCACTTCATTTTATTAATTCAAAAATTCATTGCAca
gaaaagtgtttttcttatttttatagcCTGCTCCACCAAAACGAAAAAAG
CCACAAGAGGTATGTATCTCTTCTTAAAATGTTTAATCAAGTGGTGCCTC
TTAACATTTCAGTAAGTGTCAGCAGTTTCTCCTATATCAATAAAAGATCC
AATTAATAAAAGGAATTCCTGGAATTCTGATATTTTTGTACCGGGTGAAG
TTGAACGTCTGGAGGTTGAACAAATTTATGCATGgcattttgatatttag
aaaataaagtttaaaaaagttatTGCTTTCATATCGTGTTCTTTTgttta
ccttattggaactaattttcgcgggaactaattttcgaggtcgaaaaaaa
atttctgaaaaattgcatttcgcgggttttaattttcgcggttttttcca
ttcaggaattttcgcgggttttaattttcgcggttttgcctttttttgga
caaatttctttcattttcctagggatttttcaaatttttcgataaaattg
gaaaaaattgtatttcgcgggaattaattttcgcggttttcgactctcaa
aatttttcgcgggttcaaattttcgcgattttgacaaaaaaaccgcgaaa
aacgctaaaattaaaacccacaaaaattagttccaataaggtactaAAAA
CCAAATCACAAAGTCACACAAAAGTTATCCTGACTTAGGATTGAAGTATT
TGCTTTTATATATAGCATTTTTAATTAGggccagggcaaaccagtccaac
atttcatccaacatgattttccaatgttggatgaaatgtttgatggaaaa
acttgcgttgGATTAAGCGAAAATCAAGGCtggggcaaaccgatccaaca
tttcatccgacatgacttggaaaaaaatgaaaattcaaaaagataaagaa
aaaagtacgaccaaaccaatccaacacgaaaaattacacaattcaatgag
agagcttctttgatctcgctgaaaatgttggatgaaatgtttgatggcga
tcaaacttcatccaacaccatccaacacaatttttttcttctttttttga
cttttcatctttttccaaaaatctgaATTGACGCAAaccggtccaacatt
tcatccaacatcagaaaaaaggcatgttggatgaaatgttggatcggttt
gccctTTTCCCTGCATAGCCaaagaaaagtaacaagaaaGTGCGAGCAGT
CAAATCACAAGATGAAattgatgatgaagatgatTGGAGTGATTCTGATG
ATGAAGCACTCAAAATTGATgaaccaaaacaaaagaaaaaagtatgGGAA
GTTTAGATTTTGCTTGTGCTCGCGAATTGTGGGTCCTGAACCTAAGCATT
CTCTTTACATATGACAGAGTGTGGTTTTACAGTTTCTACTGCTTTTCAAC
ACTGGTTGTTGTGATtgaaagatttcatttttaaacTGGTTCGCTTTCTA
ATCTTGAAAAAGTTTCAGAGTTTAGAGAATACTATTACTAAGTTTGGTTT
CGATTATTTGGAAATTCTTCTATTTTTCTCTCGCAATGCATGTTAATGGA
ATAGGCCCAAACTCAACTTCTTAAATTGAAGTTATTAAAGACATCAGGTT
TGAGAATACAACTTATGTTTCTTTTACACACAGCCAGAGGATTACGAAAG
TTTTGAAGAACCGACATCCTCCTCTTCTTCAGAGAGCGAAGATTCTGGTG
AGGTAGGTGGCATCTAATTTATTTGAGAACCTTTGGCACTGTACTGGCTT
GCTTGCCATAAATTATTGATGTCCCAATGGTTGTTAATCATGGGTAAGCT
CTTCACCTGCTTTTCGCCCTGTCTCTTTGGGATGAGTTGGAATTTCTATA
AGATCCTtctctaattggtcatttgaagtaatagagatgacgcgttcttt
acaaaaagtaacaaaattgtttttacttaacgaccaaccaaatcaaataa
gagcttgtaaaaactccagcttgtcccgcctattctaattgtgaattaaa
gtgggcataAAGTTAGCTGTCTAAAGGCAATATATTGCTCTCTTTTgatg
tcaatgcaatgtcttctttcaatattttccaagcaaagatttttgcacac
tttctgcctactctaacaattagaattaGCGgagcagaaagtcggccgtc
taatcTATAGCTCAGATTGACTCCCGATAATAATCTTAATACCCAActct
aaataaagaataaataaataaataaaaatacaacTAAACTGTGTGTTTGT
GATTCAGGTTCAGGGGACGTTTATACTGAGAGCTTAAGCCAGTATATCTA
TTCATAAGTCTGTTTGCTTATTCTGCATAAAAACGCTTCTTACTCGACAC
TTTGCAGTCAAAACATTGTAAACTCTCTGGTCATTAAAATCTTATATTAA
AGTGATGACTGTTGAGTGTTGAATGGAACAATTAAGTTACGTCATGCgct
atcttttgttttgttgattGGTTGAATAATTGCAATCTTTATGCAAGTTC
AAGCAGCGATTCAGGCCTCTGATAACATAATGTCAATCTGGCCTTAAGAT
TTATACtatgtttttatttgatcctTTAGGATTATGTACCagaagaaatt
gaaaagaaaaagaagccaCCTGCAAAGCGGGCTCCTGCCAAAAAGGCTGC
ACCTAAGAAACCGCCTGCTGAGAAAAAACCACGTGCCAAAAAGGAACCAT
CAGAAAAGAAACCACGAAAAGCGCCACAAAAGAAACCTGCAGCCAAAGCT
AAGAAAAGTACGAATGATGGATCGGATAGTGTGAGTTCAATCAGTTCCAG
TAGTTCTGACGACAGTTCGGATGATGATATTGAACAACTGAGAAAGAAAA
TACTGAACAAAAATGTAAGTCCACTCTGATTACGTCTTTTTTTTGAAGCA
GGTGGATGAATTTTCTTCACAATCTGATTAGCGAAATTGAAATCACACAT
TTTATATTGAGCATGGTTTTTCACGTTGGCAATCAAATCTATATGATATG
TTTTCGAAACGGATAGAATGCTGGCCGTGGACAAATCTCTAAGGGGGCTG
ACTATTCTATCCCTACCAAACCTGATATCTATAATAACTTTAAAGACTCC
TTTTCGCAGAGGGTCTTCTTTTTATGTTACTCATAAAGAATTATCTTAgt
ggaattttgatttttatacaAGTTTGACCGGTTGTTAGCTAGCGTCGGTA
GCGAAAGACCGTTAAGAAATTTTTCCTTTGGCTTGAAGTGCATTTCTCAA
AAAGTTCTACTCCTCCCCTCCCCACAAAAAGAGCACCTTTTCGAGAAGAA
TTCTTCAAGGTTCCATCCACATTATGGTTTAATATGCAATGGTAATGGTC
TTatgtttttctcatttcttAGACCGAATTAACAGAAGAAGAAAAAGCCG
CCCAAGAGAAACGAGCGGAAGAAGCGCGCGTACGCGATGNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCGGGCCATGGACAAATCTCTAAG
GGGGCTGACTATTCTATCCCTACCAAACCTGATATCTATAATAACTTTAA
AGACTCCTTTTCGCAGAGGGTCTTCTTTTTATGTTACTCATAAAGAATTA
TCTTAgtggaattttgatttttatacaAGTTTGACCGGTTGTTAGCTAGC
GTCGGTAGCGAAAGACCGTTAAGAAATTTTTCCTTTGGCTTGAAGTGCAT
TTCTCAAAAAGTTCTACTCCTCCCCTCCCCACAAAAAGAGCACCTTTTCG
AGAAGAATTCTTCAAGGTTCCATCCACATTATGGTTAAATATGCAATGGT
AATGGTCTTatgtttttctcatttcttAGACCGAATTAACAGAAGAAGAA
AAAGCCGCCCAAGAGAAACGAGCGGAAGAAGCGCGTGTACGCGATGCAGA
ACGACAACGCCTGGCGGAAGAAAGTCGAATCAGGAGAGAACAACTAAAAA
AAGAACGCgaagaagagaagaaaaagaaaaaagagtaagaaaatcttttt
tattttgctgttatTGAAAGATTTGTTGAATGGAAAAAGGCTAGATGCTT
TGCCAAGCTCTGAATGCATTCCCGACAACTAATTGTCATTGAAACCAATC
AAAATAAAGTAACGGTATTACTTCTTGTTGAGTAATGTTGCTGTCCTGAA
AAGTAACTAGTTTTCTGAAAAGtctttcaatttctaatttcatTCTAAAT
TTAAACAATTCTTTATAGGAAAAAGAAAGCGGCTGCATCAGATGACTCAG
ATGGATCTTCAAAaagcgaaagcgaaagtgatcaggaagaagtcgttgca
aagaagaagaaaaagaatgtgacgtcatccaagaagaagaaagaagaggA
GGCGAAGAAAGAAAGCACTGACGAAGAGGAAGAGAAAGATGAGAATGAGG
AAGAGAAGATTGAGGAACCAGAAGAAGAAGAGACAGAGGAAGAGAAACAA
CGTAAAGAGGAAGAACGAAAACAAAAGGAAGAGGTAAGCCTTCTCTTGCA
TTCTGTGCTTTCGATACCTTAAATTGATGAAAGGAGAAGAAGGGGTGTGG
TCGCTGACTTTTATAAACTATAGACGAAGCTATATCATCCATCTTTGgtc
gaagttttttgaaagtgttaCCATCGCAAGTATTCAAGGAAAAGTAGCAT
AGAATGCACCCCACCCCCCCTAAGTTTAGGGGGgttaaatcatttttgat
tgattgggagctgtatttttcaaaaaatactgggggctagcttgctaggg
gggctgagtgttgtgtaatagaactgggggcagagctgataggttgaaga
tattttaaattatgttaaaaacctatgctgtggggaaggttttatCCCTC
TCGAAAATTTAATAAATCTATCGAGAATTTGCACGCtaaatttcttttat
attttgctttgtgagggtgggggctatgtttctagaaCTTAGCCGGGGGC
TACTttccttagcccccccccctgaaaaatgctgggggctggacccctct
gcacacttgAGTAGATCTCTCGGTGCTATTACACTCGCGTCCAGTAGATG
TACAATCGAAACCTTCGATCGAAAATTTTTTGCTCGGCTGGGACTGAGAA
GCTTCCTCCAGGGCCTATATTAAAGTCAGTAGTTATTATCGTAAAGGCCT
ACGTCAGTCAACAAACAGacaatagaaagaaaatattaacaCGATACTTA
TACTGACTTTACTCGACTGCTGACCGATTATTTGCTACAAAATATCCTCA
AAAATCGACCCAAACTGTCCGATCTCCTTCGAGTTATCTTTAGTAAATCT
CTGAACACCCCAGAATAAGTCGGTGGAATATCTAAGTATTACTTTTACAG
TTTTTAAACTCTCAGCCAATATGAGAATTTCAACGGGTTGTATTAAGAGC
TTCGAAGATACTCAAAGATAATTATTATGAACTTTCATTCACAGGAGAAG
AAACGAAGGGACGAAGAGCGTAAGAAAGCGCAAGCAGAGAAGAGAAAACA
ACGCGAAGAAGAGAAGAGGAGAGAGAAGGAGgaacgaaaaaaagaaaaag
aggatAGGGacaaaaaacgaaaagaaaaagcTGAACGCAAAAAGTAAGTG
TATGCTTTGTTCGCGGATAGAGTTCCTTATTAAAAAGCTTTTCTTGTACG
CACACAAAGTATGTATTCGAAATCCCAATACACGAAGGTCCCTAAGTTTG
TGGAAAATCTAGCTTTACATTTGTGATTTATTCTTATGGTTGGTTGTtga
atatataatttttttcagggaattggtgaaaaaagaaaaagagatcaaag
aagaaaaacgaaaGAGTAAAGAGAAATCTGACGAAAAGAAAAAGGAACGA
TTGGAAAAAGCGGATGATGCATTTAACAGGATAGCCACTGAGAGCAAAAg
tatcaaagtttttctttgttaTTCTGTTTTTACTGCATTAAAATGAATGC
CTATATTGTGTTTGTAAAGTGAGAGACCCAAAATGTATATTTTCTCAAAT
CGGATTGTTTCAAGACATTAATTACAAGAGCCGTACGAGTCCTTGACTTC
CGTGCAGGAGGCCAGGATTCAATTCAGTTACCTTTGTTCGGGTCAACCAA
TGCCATGTTAAGGATTCGTGTACCAAGAGTTGTCAGGTATCGTTGTGTAA
AATGGTGACGGTGTACCCATTGTTCAGTGTACTTGGGTGTTCATCCGTCT
TGTACGGTTTCGTCACCGAATCATTATATTGTCCCTGCAGGTCCCTGTCG
TCTCAGGAATTTATATAGTGCTCGCCACCAATTTGATATTAGTGTCTTAT
AATTTTCTTAGCTACCGGTATTGCTGAACGACTACACGAGTTGGAAGTTG
AACTGAAACGAGCACTTTCCTTGAAAGAACACGTAAGATGAGAAATTGTT
TATGGAAAATTACTTAGTAAAGAATCAGATTTTAGACCAAGAAATCAAAA
AAGCCCATAGCTTTATCATATCTAATGTGAATGATAATATGTTTTCTGTA
TATTTTcaagaaagattttcaaattttaaagtcgTGGACTGATGCTgttt
taaaggattttttttcctgcgatttagatattttttgaattaaatgtCGA
ACTCCTTTACACATTTTTTAGGATCACGAGCGTTGTTTAAAAGCATTACA
AAACATCTCCGACTTGACATTAACACCCTCCATATTGATGAAAAACAAAA
CGATCGTACCCACCATAAAAAAGGTACGACAAGGTTTTTTACGCCGAGCT
TaaaggataaaaataattttttcccaGTCGacaattttaagatatttaca
aaatctatttccttaaaaatgtaATCTCGTTTTCACTCTTTGTCAGAAAt
agcaattttcaaaagtaCTTGTTGACTTCTCTCTTTTCTAGTGATTACTT
AGAGAAGGCTATACGGCACCATAAATAAGGCTTGCGAAAATTTCTTTCCC
CTTTCTTAATTAAAACCACCTGTTATCTGTTTTTAAAGATAACTTCCATT
TCCCATTAGGTTCGCGCATACAAAGCCAATCAGGAGGTGAGCGATAAAGC
TTCCAAGCTATACAACAAATTCAAAAGTCTTTTCGCTGTTGCAACGCCAG
GTTGGTTCATGCCCTTGATTTCATATTTAGAAtgtaattttgaagtttta
caagGTACTATGTTCCACAAATCTAAGACTAGATTTAATTTTTATGGTAT
TTAAAACAGTTTAAAAACGAAAAGAGCAAccaccaattttgaaataattt
tcaaatttcaataaaacatTCTTTTTTACAGCAAAAGGCACAATCACAAA
ACCCGCTGTCATGACACCAGCCACGCCTGCACCTCCGCAAGATGGCAGTA
CGGTCGTCACGACAACGCAATCAAACACACACGTACAGATCAATATAAGT
ATCAATTCGAATGGAGAGAACACGCCTTCAGTTTCCATTAGTAAGTCAAG
AggaatgttttttgaaaactatttaaaagttttattaccTTAAGGGGACT
TATTTTGGTGGGGACTAATTTTGACGAGCgacaaaaatcctgaaaatttt
agattttggcgagaacttattttactgattgatgaatttttttaattttg
acgggaactaatttttgtgaattttgtccAAAATAAGTTCCTTAAGGTAG
CAACCTAAAACATAGGCTGTTGACATCTACTGCAGATTTCGTACCTTTAT
ACAACATCCATTCTTGTAGAGTGTAATATTATCCTGTTTAGGGTTTCCTA
GGTACACTAGGCTTTTTATTCTTTGCATAAGTTGGCATAAGTTATAGCTT
CCTAGTGTTGGTATTTAAAGTCAGAAATCAAGATTTATGATTGGGAAAAT
TAATGTGATATATAACNTAATATTATCCTGTTTAGGGTTTCCTAGGTACA
CTAGGCTTTTTATTCTTTGCATAAGTTGGCATAAGTTATAGCTTCCTAGT
GTTGGTATTTAAAGTCAGAAATCAAGATTTATGATTGGGTAAATTAATGT
GATATATAACGTTACGTATCAAACGTTCCTCCCATGCATCTGATTTGGTT
GAATAATTTATACCGTTTGACCACATTTGAATTGCTAACTGTTTTACTCC
CCTTTTGAAAGAAGCTATTTTTGATAAACCAGTTTTGACTCAAAGTCAAT
TGTTTATTGTATTTTTGAGCAGTCAATCAGTGTCGCAATTCTTTTAATTT
GATAATTTCCAAAGCTTTAAGCCACCACCGCAGTGGTTATAAAAATTTCT
CTAAATCAGTTGCCAATGTTAAGCACGCTATCCTGGctcaatataaaaat
aaaagatgCACTGCCAATACTCTTCACCTTATCTGACTAAAGAACGGGAT
CTGCCCTCGAATGTAAAAGTTTACAAGCATTCCTTTAGTTCAAAACATTC
CGATTTTTTTCCTTGCAATGATTTTTAGGGATTTGGATTTGTACCTGGAA
ACGCTAATTACGCAAAAACTACggatttttaaacttcaaattCCAAAtta
gcaccctcaaattgactaaatttaatttcaccgatatttttgaaaaaaat
gaaacattttgcATGGTCTAGAATCATTccgtattttatttttttctctt
actTATTAACAGGTACCCCACCAACATAGAGAATAGACTTGTTGAACCGA
AGAAGAAGTGACGTCATGAAGATTTATTTAGCCATGCAAGGTGTAGTGTA
AATATTATTGTCTTTTCCTGTCAAATATTTTACTAAACATTTAGGGTTCT
TTTCTACAGAGGCCTTGTTTTGGGGCATTTTCCGTAACTTTAATAATTTC
ATGCGCGTGTTCTGTCGGCTTGCTGAGATAGAAAGACCCTTGCTGAGACT
TTCCTACAAAACAAGTCTTACTGGACTCACAATTTGTAGCAATGAATCAA
AAATCGGATAAAATCGGGCGTGCGTACTATAATCCATTCTATTTATCATA
GACCGgtttatttctaattatttttatcaaaagatgaaTTTATCTTATCA
AATACACCGTGAGCAATTATTGACTTAGCACCTGAACTTGAAAAGTAAGC
TGTAAAGCAGAAACTTCAGTCGTCCATTTTCTTTGAGCCGTGTCACGCTT
TTGTTTGgtatcttttcatttttcacgaACCACTCTTCGACTATGTTTGA
GTTCTTCTGTCTATATCCTTGTCAATtctcttcaaacatttttttgctag
tCTCTACTTAATGTATTTAGGTTTGCTATCCATTACTAGTATGTCTAATa
ttatttttaggtttttacggtagttttaatttttctgagattttttaaaa
gtaaagttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004289XLOC_004289Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007600-exon-sc0000078-1491911889:556691..556719TCONS_00007600-exon-sc0000078-1491911889:556691..556719Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1510915933:556691..556719TCONS_00007600-exon-sc0000078-1510915933:556691..556719Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1575043694:556691..556719TCONS_00007600-exon-sc0000078-1575043694:556691..556719Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1491911889:561313..561408TCONS_00007600-exon-sc0000078-1491911889:561313..561408Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1510915933:561313..561408TCONS_00007600-exon-sc0000078-1510915933:561313..561408Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1575043694:561313..561408TCONS_00007600-exon-sc0000078-1575043694:561313..561408Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1491911889:561667..561740TCONS_00007600-exon-sc0000078-1491911889:561667..561740Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1510915933:561667..561740TCONS_00007600-exon-sc0000078-1510915933:561667..561740Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1575043694:561667..561740TCONS_00007600-exon-sc0000078-1575043694:561667..561740Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1491911889:562118..562267TCONS_00007600-exon-sc0000078-1491911889:562118..562267Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1510915933:562118..562267TCONS_00007600-exon-sc0000078-1510915933:562118..562267Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1575043694:562118..562267TCONS_00007600-exon-sc0000078-1575043694:562118..562267Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1491911889:562585..562666TCONS_00007600-exon-sc0000078-1491911889:562585..562666Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1510915933:562585..562666TCONS_00007600-exon-sc0000078-1510915933:562585..562666Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1575043694:562585..562666TCONS_00007600-exon-sc0000078-1575043694:562585..562666Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1491911889:562867..562899TCONS_00007600-exon-sc0000078-1491911889:562867..562899Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1510915933:562867..562899TCONS_00007600-exon-sc0000078-1510915933:562867..562899Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1575043694:562867..562899TCONS_00007600-exon-sc0000078-1575043694:562867..562899Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1491911889:564009..564131TCONS_00007600-exon-sc0000078-1491911889:564009..564131Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1510915933:564009..564131TCONS_00007600-exon-sc0000078-1510915933:564009..564131Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1575043694:564009..564131TCONS_00007600-exon-sc0000078-1575043694:564009..564131Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1491911889:564474..564542TCONS_00007600-exon-sc0000078-1491911889:564474..564542Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1510915933:564474..564542TCONS_00007600-exon-sc0000078-1510915933:564474..564542Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1575043694:564474..564542TCONS_00007600-exon-sc0000078-1575043694:564474..564542Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1491911889:565420..565704TCONS_00007600-exon-sc0000078-1491911889:565420..565704Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1510915933:565420..565704TCONS_00007600-exon-sc0000078-1510915933:565420..565704Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1575043694:565420..565704TCONS_00007600-exon-sc0000078-1575043694:565420..565704Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1491911889:566720..566874TCONS_00007600-exon-sc0000078-1491911889:566720..566874Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1510915933:566720..566874TCONS_00007600-exon-sc0000078-1510915933:566720..566874Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1575043694:566720..566874TCONS_00007600-exon-sc0000078-1575043694:566720..566874Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1491911889:567109..567373TCONS_00007600-exon-sc0000078-1491911889:567109..567373Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1510915933:567109..567373TCONS_00007600-exon-sc0000078-1510915933:567109..567373Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1575043694:567109..567373TCONS_00007600-exon-sc0000078-1575043694:567109..567373Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1491911889:568335..568483TCONS_00007600-exon-sc0000078-1491911889:568335..568483Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1510915933:568335..568483TCONS_00007600-exon-sc0000078-1510915933:568335..568483Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1575043694:568335..568483TCONS_00007600-exon-sc0000078-1575043694:568335..568483Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1491911889:568659..568789TCONS_00007600-exon-sc0000078-1491911889:568659..568789Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1510915933:568659..568789TCONS_00007600-exon-sc0000078-1510915933:568659..568789Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1575043694:568659..568789TCONS_00007600-exon-sc0000078-1575043694:568659..568789Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1491911889:569202..569272TCONS_00007600-exon-sc0000078-1491911889:569202..569272Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1510915933:569202..569272TCONS_00007600-exon-sc0000078-1510915933:569202..569272Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1575043694:569202..569272TCONS_00007600-exon-sc0000078-1575043694:569202..569272Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1491911889:569512..569613TCONS_00007600-exon-sc0000078-1491911889:569512..569613Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1510915933:569512..569613TCONS_00007600-exon-sc0000078-1510915933:569512..569613Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1575043694:569512..569613TCONS_00007600-exon-sc0000078-1575043694:569512..569613Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1491911889:569900..569990TCONS_00007600-exon-sc0000078-1491911889:569900..569990Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1510915933:569900..569990TCONS_00007600-exon-sc0000078-1510915933:569900..569990Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1575043694:569900..569990TCONS_00007600-exon-sc0000078-1575043694:569900..569990Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1491911889:570172..570330TCONS_00007600-exon-sc0000078-1491911889:570172..570330Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1510915933:570172..570330TCONS_00007600-exon-sc0000078-1510915933:570172..570330Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1575043694:570172..570330TCONS_00007600-exon-sc0000078-1575043694:570172..570330Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1491911889:571503..572199TCONS_00007600-exon-sc0000078-1491911889:571503..572199Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1510915933:571503..572199TCONS_00007600-exon-sc0000078-1510915933:571503..572199Clytia hemisphaericaexon
TCONS_00007600-exon-sc0000078-1575043694:571503..572199TCONS_00007600-exon-sc0000078-1575043694:571503..572199Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000078supercontigsc0000078:556691..572199 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.4864	8.05841	11.0427	9.30648	24.6906	15.2583	17.392	18.2629	5.73303	6.24339	5.93822	4.25386	2.97836	3.25482	3.44557	3.57486	3.57899	3.52764	0.905511	1.17164	2.76379	2.98878	7.15786	6.51868	9.76286	11.6644	3.0097	3.5438	10.5573	9.41424
Blast
[Close]
BLAST of TCONS_00007600 vs. Swiss-Prot (Human)
Match: HDGF (Hepatoma-derived growth factor OS=Homo sapiens GN=HDGF PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 9.063e-25
Identity = 54/93 (58.06%), Postives = 64/93 (68.82%), Query Frame = 3 
Query:   45 RMAVSKVFSPGDLVWAKMKGYPHWPARVDE-PQPGQVIPKKKYLIFFFGTHETGFLPADGLYNFEKHKEKWFKPNKRRGFPEALDEIINNPTV 320
            R    K +  GDLV+AKMKGYPHWPAR+DE P+        KY +FFFGTHET FL    L+ +E+ KEK+ KPNKR+GF E L EI NNPTV
Sbjct:    3 RSNRQKEYKCGDLVFAKMKGYPHWPARIDEMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYEESKEKFGKPNKRKGFSEGLWEIENNPTV 95
The following BLAST results are available for this feature:
BLAST of TCONS_00007600 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HDGF9.063e-2558.06Hepatoma-derived growth factor OS=Homo sapiens GN=... [more]
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