TCONS_00007609 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007609
Unique NameTCONS_00007609
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1187

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007609 ID=TCONS_00007609|Name=TCONS_00007609|organism=Clytia hemisphaerica|type=transcript|length=1187bp
GAACGAAAGTGACAATTAGACTCCTGTTAAGCAACTAGTAGGCGATTAAA
AATGGCTGGCAAACAGATTCGAAGAGAACATGGCACGGCAGCTATGATAA
TGGGTTTGATTGAAATCCTTTGCGGAGCCATTGTGGTTGTGTTAAGCTTC
GTGGTGGGTGGAAAAGGAGACCTCAGTGCAACACTAAAACCTTACTGGGC
TGGCATAGTGTTTGTGGTGCCCGGATTCGTCGGTTTGATAGTTGGGCTAA
CCAAAAACCATTGCTCTATGATTGGCTTCATGGTATTGAACATCTTGGCG
TTTGTCATCCAAGCCATCGCAATGGTGCTTTTAGGTCTGGTCATCCTCAT
TTACACTGCGGTGGCAAAAAACGTCACCAAATATTGCAAACCTCAAAATG
GTGGTTGTAAATGCAACTATGATGACGGCACACATTTTTTCGTTGGTGCC
ATGAAAGATTGTGAGGTCCTGGCTGACGTGACCACAATTTTAACGGTTAT
TCTGGCGTCCCTGGGTGTAGCTGCTTTGGTTGCTTTGAGTGCTTCGATAC
TTGGTTGCGTCTCTATCTGCTGTACGGCTCCAACCACGACGGCAGTGATT
ATGAAAGATGGTACTGATGTTCCTTTGCAACAACACCAACAACCTCCAGC
ATACAATGAAAGCGAATACCAAGAAAAATAAGATGGTTGCTTCAtctatt
gattgattgattgattggtcgaataattcaaattttgacaccaTAAAGCG
GGGGCTGTAATTAAATATATAACTCAGCGTTCACAAAATAATAATTGACA
GAGCTTGGAAAGTCAGAcacaaaattgataaatttgacaaggaaataaag
gaaaaagagcaaaaagatttttaaccactttttggaaaaataaagtTCGT
CAATATTGtaaatatattataatataaaGGTTTGTATTTTTAATCACTTA
ATATTAAACTGGTTGATAGACTTTCAGTAAGAGCCATTCCAATTTCAATT
ACCTTCCAAAATTCTCCACTCAAACAATACACCATCCAGACATTAGGCCA
AAAGCTAAAGAAAGGGGGTAGGTTGGTTCTCGATTCTCAACATCCAGTAA
CGTTATAGAAAGTTGCCATTAGTTTCAAGAtgctttaatttcattttatt
gataatttttgatatttaATTATGGGTTCGTAAGATA
Run BLAST on NCBI

protein sequence of TCONS_00007609-protein

>TCONS_00007609-protein ID=TCONS_00007609-protein|Name=TCONS_00007609-protein|organism=Clytia hemisphaerica|type=polypeptide|length=209bp
MAGKQIRREHGTAAMIMGLIEILCGAIVVVLSFVVGGKGDLSATLKPYWA
GIVFVVPGFVGLIVGLTKNHCSMIGFMVLNILAFVIQAIAMVLLGLVILI
YTAVAKNVTKYCKPQNGGCKCNYDDGTHFFVGAMKDCEVLADVTTILTVI
LASLGVAALVALSASILGCVSICCTAPTTTAVIMKDGTDVPLQQHQQPPA
YNESEYQEK
Run BLAST on NCBI

transcript from alignment at sc0000078:200366..209053-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007609 ID=TCONS_00007609|Name=TCONS_00007609|organism=Clytia hemisphaerica|type=transcript|length=8688bp|location=Sequence derived from alignment at sc0000078:200366..209053- (Clytia hemisphaerica)
GAACGAAAGTGACAATTAGACTCCTGTTAAGCAACTAGTAGGGTAATATA
ATGAATCCTAATATTTTATTTATAAATTCTCTATGTTTTCCCATTTTTTC
AAAGTTTTTATATAAAAGTTTTTTTTTCAAAACAAAGGTTTAGTTTTTCA
CTTCTTTCTATTTTTTGCTCATAATTTCTTCCTTTTTTCATGAAATGCCA
TATGTGCTTTGCAAAATCCGAAAATGGGTGTAGTTGAAAAAATACTGTTA
AAATTTGAAGAAATAAGAGAGAAATATTTCAAGGAGCCAAGTTTTTTGAC
TCTGACAAAATTTTTTATCTCATTGCTAAAATAAAAACATTCTGCTTTGG
TCTGATTGGTTTGTTATATAAGACTTCAGATGATTTGGGGTCTGATGCGT
TTGTAACCTAAGAGAAGAGACTTTAAATTTGAAAATATTCTGTACAAAAC
ATATAGGTTGAAATTGCGTGATTGTTGATAAGTCTTTTGAAGAACTTTCA
AGTCGAACTTAGGGTAGTAAATAAGTTCTTAAATTTAAAATATTTGTTTC
CTTTATCGTGTAGCGATTAAAAATGGCTGGCAAACAGATTCGAAGAGAAC
ATGGCACGGCAGCTATGATAATGGGTTTGATTGAAATCCTTTGCGGAGCC
ATTGTGGTTGTGTTAAGCTTCGTGGTGGGTGGAAAAGGAGACCTCAGTGC
AACACTAAAACCTTACTGGGCTGGCATAGTGGTAAGTATCACAACGAACG
AAAAGAGCAACAGTGGAATTAAATCATTAAGCTAGAGTGTACTTCTGACT
GAACTTCCCTTTCTGATTATCTTAATAACAAAATACGCGTCCAGTGAAGT
CTCAGCGCCATCCAGTCAATCAAAAAGACATAAGTGGCCCCTGGGCTACA
TTGGAATCAAATAAAGGATTTACAAAAAACGGACGAACGTAAAATAAGGA
AACTTACAAACATTTTTGAATAACCATAAAAGGAGAAATACAGGCAGGCA
GATAGACGGACAGACCGATAGGTAGATATAGAAAATTAAAATAAAAACTG
GGTAAATACTGTAAACAGATGTCTGGCAAATCATATTTGGATTATACCGA
AGTTCAATTAGAATAGATCAACAGATTCCGATTCTCTCGAAGTATAAGTT
CTTTGAAGTTACAGGCACGACGGAAGCTTTTTATATCTAGTACGGTGAAT
GAGGAAATTTAAGTGATTTTATAGCGATTTTACCGACGAAGAGGGAGATT
TCGCGTTTTTTTTGTGAAAATCTGGTACGGTGGCCGCCTTACTTGCCGTA
CCCGTTGCGTCGTACCTGAGTTATGCAGCGAAGGTATAAGTCAGTGTTTT
TTACACTTTTGGCAAAAACGTGAAAATTTGGGCACTTTTTTAAAACCAAA
TTTTAGAGAGCAAGTTTTCGTTCATTATCAAATTTAGTGNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNAAAACGTATAGAACAGCCATTTCAACGCT
CTTGGAGCTTGAATGGGGTGTCAATTTCTATCCTTTTGTATTTTCGGCAT
CAAATTAATTAATGGCAAATTTTTCGCTGAAATTTATTTAAGAAGCTTTA
TATTTGATCATCAGATCATTATTTTGTCAAAATAAGTCATTTTAACAATG
TAAGGACAATAGAATAATTGATGAGATCGATATCTCTAAAACTGCCCTTC
CCAGCTTTTGCCTACTGACAATTTCTATCTATTTATACTAAAGGCATCTC
ATTCAGCATGATTAAAATATTTGGTGTAATAAAGTTAACAGGCATCACAC
TTAATTGCCCTGTCAATATTTTTGTCAAAAAGTGTCACTTTGTCTAGAAA
ATGACTGGTAACGTTAAAGGTCACTTTTAGTATTCTAAGCTACAGTAATT
TTTTCAGCCACGTGCTCAGTGGTTCATTTGAAAGCCACACCAGGACTCGA
TTTGGATGTTCTCTACGGTGGAGAGAGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTGATTGAAGT
TTTCCGACGCGCCGCTTAAAATAAGCAAAAATGGTGATTCCTTTTTAGCA
TTAGCTAAACTTATATTTTGGTGTGACCGCGCTCTAACAAACTGGGAATA
GTCCGAAGAAGCTCAAAGAGGTTACTATGGCCATGGAAGTATAAAGAAAC
AGGAGAAGTATGCTATTGTAACCAAGCTCGCCCTACGATTNNTTCATCAA
ATGAGAAGATTTTTCGATCAATGTTTTCCTTAAGGTGAACTCTATTGCTT
GATACTTTCCTCCAAAATTCTCCAGCGACTTTATGTCTACACATTGAGTC
TGAAATAGTGTGTGCTTATAAAGAACTTTTCATTTTCTGGCTTGAGAAAC
TATCTTTTCAAAACAAAATTGAACGGATAACGAAATGGAACTTAAACTTG
TTTCGTGGACGAAGTTTTATTTAATTTTCGTATATTAAAAGGCTAGAATC
TTCAATACTGATCATTAGAATATTAAGAGCAAACTTGAGTTCTACTAAAA
AGTCTTATTTCATCGGGCGAGCTTAGAATTTCTTTTGATACATTTTATAA
AAGAAATCAAAAGACTTTAACGACCAATTACCGACACATTCAACTCCTGT
TTTTCTTTATACCCCGGGGGGGGGCACTCGATCTGAAATCGACCATACGT
TCGGCCCAAAATTTGGCTTCTAAAATAGGACCCTTACAGTGCAGTGAATT
TCCATGAAAAATCATACCCTTACAGTGCACTTTTTCAAAATTTCTCGCCC
GTTAGGGCGAAAATTTTTGCAATTTTCCAAGAAAATGTGGAGTTTTTCCT
CCAAAATTGACCAATTTTGTGATAATTTTACCAAAAAATTGGCCTTTTAC
CAAAATTTCCTACCCTTACAGTGCAGTTCAGTGCATTCTTGTAATTTCCT
ACCCTTACAGTGCACTAGCTGAACTATGAAAAACCTACCCTTAAGGGCCG
AACGTCTGGTAGGTCATTTACCTTGAGTGCCCCCCCCGGGCTTTATACCT
CTATGCTATGGCTAGGTTTTTCTGATATTTCTTGTTGGAATATTGNAAAT
TATAATTCGCAACTTATTGGAAGTTTTCATCCCAAAATACTCAAGAATCG
TGATTTTAGACTGAAAAAACCGTTTTTGACGAAAATTAATTTTCACGTTT
TTGCCAAAAGTGTAAAAAACACTGACATAAAATCATAATTCATTTTTGTT
TATTTCATAGTTTGTGGTGCCCGGATTCGTCGGTTTGATAGTTGGGCTAA
CCAAAAACCATTGCTCTGTAAGTATCTTCATAGCAGAGGGATAGACCTCG
AATGGTGTCAAATCAATATTGTATTGTATTCATTATTGTTTTAATCAAAG
ATTATTCTAACATTCGAACAATGTGAATTCGAGTCTTATCCCTTATTAAC
CTGAAGAAACTATAATGTATGTAATTTGGTCCTCAGCTCGAACAACTTTT
CTGGTCCCTTAAGCTAAAAAACCATTCTTAGCAATTCTCTACAACTCGAA
TTTGGGCGTTTAAAAGAAGGGGGCGTTTATTAGATAATTCATAACCAAGT
TCACGGAACCGACAGCAGATTCTCTTTCAAGTTAACTAGGCTACTTTCAA
GGGTGGTTTCTACATGCAATGGCTATGTGTATTTTTGAGCAAATTCTAGG
ATCTTTTGAATTTATAGCCTTTTATTCATTGTTGTTAAAAAACCATAAAC
TAATTTATCATCTGTTTATGACGTACTACATGTTACGTCATGTTTTCCTG
TTTTTCAAGCCCACTATAATTGAAATCGAGTAAAAGACTTTTAAAACGTT
GGTTTAAATCTCAGATGACGCAATCTTTTATGCTAAATAAACCAATAAGC
TGGGTATTTACTATCACTGAATCTAAAAGATGAAAACTTGGCATACTCCA
GACCTTTCACGTCTTTCATAAAAACAAAGTTGGTAAAACCTGGTCCGCAG
TAGCAGGCAGTAGCGTGGTTGCAGGGGGGGGGGACAGTGCCCCCCATCAG
ACGATTTTTTTGGATGGCGCCGAAATACAAAGGGCGCAAAAAGACGCCTC
CGATTACTAATTTCGGCGCCCCTTTGCTCTTTTACACCTTAGATATGGCC
TTAGTCCACCTACCACGCTACTGCTGGTCTGGAATCTTTCACTAACATAC
ACTGACTTTCAATATTTTGCAAAAAAAAGTGATTAGTAAACTTTATTTAG
AAATTGACAAGAAATGGCCCCAAAGAAGGCACTTTCAGCCCCTCAAAATT
CAAATAGATTTCTCGTTGCCAATTCGACCGTCGCCGGAGGCCCTGTTTGT
TCAATAACTGTCACTGAGGCTGTGTGAAATATGCGGAAACATAATATGAT
CACGAGCTTAGTAAAATCATCAATCACTTGGATTAATCTGATGGTTAGCT
GTGTCGGAAAAATTCGAAGGAAAACTTTAAAAGAAAATCGTAGTTCTATA
AAGAAAAATCTTTTGAGCACTGAAAACGCTTTAATGCCGTATTTTAGCCT
GTGATTTCGATGAAGTTTACTAGGCTTAATGATCCATCTTTCTTTCAGAT
GATTGGCTTCATGGTATTGAACATCTTGGCGTTTGTCATCCAAGCCATCG
CAATGGTGCTTTTAGGTCTGGTCATCCTCATTTACACTGCGGTGGCAAAA
AACGTCACCAAATATTGCAAACCTCAAAATGGTGGTTGTAAATGCAACTA
TGATGACGGCACACATTTTTTCGTTGGTGCCATGAAAGATTGTGAGGTCC
TGGCTGACGTGACCACAATTTTAACGGTCATTCTGGCGTCCNAAGATTGT
GAGGTCCTGGCTGACGTGACCACAATTTTAACGGTTATTCTGGCGTCCCT
GGGTGTAGCTGCTTTGGTTGCTTTGAGTGCTTCGATACTTGGTTGCGTCT
CTATCTGCTGTACGGTAAGGGTATACTTCCTATTTGATAAAACACTGTTA
TGTGAACACGTGAAAGGTGTGACACAAACAAGAACCTAGACGATGCTATC
ATTTTAGTGACCGTTCAAGGGAGATAGGATCATCTAAATGTGACCTAACG
CCACATCCGTATTAGGTTTGAATTTTCTTGGGTTTTTGAGGCTCTCCTTC
TTCTTGTTTTCAGTGAAAGAGTCTTTCAACCTTGTGCGAACTTTAACCAC
CAAGTGGGTGTAGGGCAATATTTAATAAATTAACAAATTTTGTGAGAAAA
TGTTTACTTTATTACACGAAAATAAGTAGCCATATGTAATTAACACAAAT
TAAGAAAATTAGTGTTGATTAAAAACAGCCATGGTGGTATCCTAGAAAAA
GCAAACAAAATTTGCTTTAATTTTTTCGTGTTGATTACAAGGCCGTTAAT
TATGTGTTTCTATTTATTTTTGTGTACTAAAGTATCTAAATTGGAACTGG
GGATTATATAAAATAAGATTTTAGCAAGCAGTGGTACGTACAAAAAACGA
GTTGATCATTTTCATCCTTTTATGCAGGCTCCAACCACGACGGCAGTGAT
TATGAAAGATGGTACTGATGTTCCTTTGCAACAACACCAACAACCTCCAG
CATACAATGAAAGCGAATACCAAGAAAAATAAGATGGTTGCTTCATCTAT
TGATTGATTGATTGATTGGTCGAATAATTCAAATTTTGACACCATAAAGC
GGGGGCTGTAATTAAATATATAACTCAGCGTTCACAAAATAATAATTGAC
AGAGCTTGGAAAGTCAGACACAAAATTGATAAATTTGACAAGGAAATAAA
GGAAAAAGAGCAAAAAGATTTTTAACCACTTTTTGGAAAAATAAAGTTCG
TCAATATTGTAAATATATTATAATATAAAGGTTTGTATTTTTAATCACTT
AATATTAAACTGGTTGATAGACTTTCAGTAAGAGCCATTCCAATTTCAAT
TACCTTCCAAAATTCTCCACTCAAACAATACACCATCCAGACATTAGGCC
AAAAGCTAAAGAAAGGGGGTAGGTTGGTTCTCGATTCTCAACATCCAGTA
ACGTTATAGAAAGTTGCCATTAGTTTCAAGATGCTTTAATTTCATTTTAT
TGATAATTTTTGATATTTAATTATGGGTTCGTAAGATA

Coding sequence (CDS) from alignment at sc0000078:200366..209053-

>TCONS_00007609 ID=TCONS_00007609|Name=TCONS_00007609|organism=Clytia hemisphaerica|type=CDS|length=3150bp|location=Sequence derived from alignment at sc0000078:200366..209053- (Clytia hemisphaerica)
GCTCCAACCACGACGGCAGTGATTATGAAAGATGGTACTGATGTTCCTTT
GCAACAACACCAACAACCTCCAGCATACAATGAAAGCGAATACCAAGAAA
AATAAGTCCTGGCTGACGTGACCACAATTTTAACGGTTATTCTGGCGTCC
CTGGGTGTAGCTGCTTTGGTTGCTTTGAGTGCTTCGATACTTGGTTGCGT
CTCTATCTGCTGTACGATGATTGGCTTCATGGTATTGAACATCTTGGCGT
TTGTCATCCAAGCCATCGCAATGGTGCTTTTAGGTCTGGTCATCCTCATT
TACACTGCGGTGGCAAAAAACGTCACCAAATATTGCAAACCTCAAAATGG
TGGTTGTAAATGCAACTATGATGACGGCACACATTTTTTCGTTGGTGCCA
TGAAAGATTGTGAGTTTGTGGTGCCCGGATTCGTCGGTTTGATAGTTGGG
CTAACCAAAAACCATTGCTCTATGGCTGGCAAACAGATTCGAAGAGAACA
TGGCACGGCAGCTATGATAATGGGTTTGATTGAAATCCTTTGCGGAGCCA
TTGTGGTTGTGTTAAGCTTCGTGGTGGGTGGAAAAGGAGACCTCAGTGCA
ACACTAAAACCTTACTGGGCTGGCATAGTGGCTCCAACCACGACGGCAGT
GATTATGAAAGATGGTACTGATGTTCCTTTGCAACAACACCAACAACCTC
CAGCATACAATGAAAGCGAATACCAAGAAAAATAAGTCCTGGCTGACGTG
ACCACAATTTTAACGGTTATTCTGGCGTCCCTGGGTGTAGCTGCTTTGGT
TGCTTTGAGTGCTTCGATACTTGGTTGCGTCTCTATCTGCTGTACGATGA
TTGGCTTCATGGTATTGAACATCTTGGCGTTTGTCATCCAAGCCATCGCA
ATGGTGCTTTTAGGTCTGGTCATCCTCATTTACACTGCGGTGGCAAAAAA
CGTCACCAAATATTGCAAACCTCAAAATGGTGGTTGTAAATGCAACTATG
ATGACGGCACACATTTTTTCGTTGGTGCCATGAAAGATTGTGAGTTTGTG
GTGCCCGGATTCGTCGGTTTGATAGTTGGGCTAACCAAAAACCATTGCTC
TATGGCTGGCAAACAGATTCGAAGAGAACATGGCACGGCAGCTATGATAA
TGGGTTTGATTGAAATCCTTTGCGGAGCCATTGTGGTTGTGTTAAGCTTC
GTGGTGGGTGGAAAAGGAGACCTCAGTGCAACACTAAAACCTTACTGGGC
TGGCATAGTGGCTCCAACCACGACGGCAGTGATTATGAAAGATGGTACTG
ATGTTCCTTTGCAACAACACCAACAACCTCCAGCATACAATGAAAGCGAA
TACCAAGAAAAATAAGTCCTGGCTGACGTGACCACAATTTTAACGGTTAT
TCTGGCGTCCCTGGGTGTAGCTGCTTTGGTTGCTTTGAGTGCTTCGATAC
TTGGTTGCGTCTCTATCTGCTGTACGATGATTGGCTTCATGGTATTGAAC
ATCTTGGCGTTTGTCATCCAAGCCATCGCAATGGTGCTTTTAGGTCTGGT
CATCCTCATTTACACTGCGGTGGCAAAAAACGTCACCAAATATTGCAAAC
CTCAAAATGGTGGTTGTAAATGCAACTATGATGACGGCACACATTTTTTC
GTTGGTGCCATGAAAGATTGTGAGTTTGTGGTGCCCGGATTCGTCGGTTT
GATAGTTGGGCTAACCAAAAACCATTGCTCTATGGCTGGCAAACAGATTC
GAAGAGAACATGGCACGGCAGCTATGATAATGGGTTTGATTGAAATCCTT
TGCGGAGCCATTGTGGTTGTGTTAAGCTTCGTGGTGGGTGGAAAAGGAGA
CCTCAGTGCAACACTAAAACCTTACTGGGCTGGCATAGTGGCTCCAACCA
CGACGGCAGTGATTATGAAAGATGGTACTGATGTTCCTTTGCAACAACAC
CAACAACCTCCAGCATACAATGAAAGCGAATACCAAGAAAAATAAGTCCT
GGCTGACGTGACCACAATTTTAACGGTTATTCTGGCGTCCCTGGGTGTAG
CTGCTTTGGTTGCTTTGAGTGCTTCGATACTTGGTTGCGTCTCTATCTGC
TGTACGATGATTGGCTTCATGGTATTGAACATCTTGGCGTTTGTCATCCA
AGCCATCGCAATGGTGCTTTTAGGTCTGGTCATCCTCATTTACACTGCGG
TGGCAAAAAACGTCACCAAATATTGCAAACCTCAAAATGGTGGTTGTAAA
TGCAACTATGATGACGGCACACATTTTTTCGTTGGTGCCATGAAAGATTG
TGAGTTTGTGGTGCCCGGATTCGTCGGTTTGATAGTTGGGCTAACCAAAA
ACCATTGCTCTATGGCTGGCAAACAGATTCGAAGAGAACATGGCACGGCA
GCTATGATAATGGGTTTGATTGAAATCCTTTGCGGAGCCATTGTGGTTGT
GTTAAGCTTCGTGGTGGGTGGAAAAGGAGACCTCAGTGCAACACTAAAAC
CTTACTGGGCTGGCATAGTGGCTCCAACCACGACGGCAGTGATTATGAAA
GATGGTACTGATGTTCCTTTGCAACAACACCAACAACCTCCAGCATACAA
TGAAAGCGAATACCAAGAAAAATAAGTCCTGGCTGACGTGACCACAATTT
TAACGGTTATTCTGGCGTCCCTGGGTGTAGCTGCTTTGGTTGCTTTGAGT
GCTTCGATACTTGGTTGCGTCTCTATCTGCTGTACGATGATTGGCTTCAT
GGTATTGAACATCTTGGCGTTTGTCATCCAAGCCATCGCAATGGTGCTTT
TAGGTCTGGTCATCCTCATTTACACTGCGGTGGCAAAAAACGTCACCAAA
TATTGCAAACCTCAAAATGGTGGTTGTAAATGCAACTATGATGACGGCAC
ACATTTTTTCGTTGGTGCCATGAAAGATTGTGAGTTTGTGGTGCCCGGAT
TCGTCGGTTTGATAGTTGGGCTAACCAAAAACCATTGCTCTATGGCTGGC
AAACAGATTCGAAGAGAACATGGCACGGCAGCTATGATAATGGGTTTGAT
TGAAATCCTTTGCGGAGCCATTGTGGTTGTGTTAAGCTTCGTGGTGGGTG
GAAAAGGAGACCTCAGTGCAACACTAAAACCTTACTGGGCTGGCATAGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004295XLOC_004295Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007609-exon-sc0000078-1575043694:209012..209053TCONS_00007609-exon-sc0000078-1575043694:209012..209053Clytia hemisphaericaexon
TCONS_00007609-exon-sc0000078-1575043694:208323..208490TCONS_00007609-exon-sc0000078-1575043694:208323..208490Clytia hemisphaericaexon
TCONS_00007609-exon-sc0000078-1575043694:203187..203243TCONS_00007609-exon-sc0000078-1575043694:203187..203243Clytia hemisphaericaexon
TCONS_00007609-exon-sc0000078-1575043694:201708..201905TCONS_00007609-exon-sc0000078-1575043694:201708..201905Clytia hemisphaericaexon
TCONS_00007609-exon-sc0000078-1575043694:201540..201650TCONS_00007609-exon-sc0000078-1575043694:201540..201650Clytia hemisphaericaexon
TCONS_00007609-exon-sc0000078-1575043694:200366..200976TCONS_00007609-exon-sc0000078-1575043694:200366..200976Clytia hemisphaericaexon
TCONS_00007609-exon-sc0000078-1510915933:209012..209053TCONS_00007609-exon-sc0000078-1510915933:209012..209053Clytia hemisphaericaexon
TCONS_00007609-exon-sc0000078-1510915933:208323..208490TCONS_00007609-exon-sc0000078-1510915933:208323..208490Clytia hemisphaericaexon
TCONS_00007609-exon-sc0000078-1510915933:203187..203243TCONS_00007609-exon-sc0000078-1510915933:203187..203243Clytia hemisphaericaexon
TCONS_00007609-exon-sc0000078-1510915933:201708..201905TCONS_00007609-exon-sc0000078-1510915933:201708..201905Clytia hemisphaericaexon
TCONS_00007609-exon-sc0000078-1510915933:201540..201650TCONS_00007609-exon-sc0000078-1510915933:201540..201650Clytia hemisphaericaexon
TCONS_00007609-exon-sc0000078-1510915933:200366..200976TCONS_00007609-exon-sc0000078-1510915933:200366..200976Clytia hemisphaericaexon
TCONS_00007609-exon-sc0000078-1491911889:209012..209053TCONS_00007609-exon-sc0000078-1491911889:209012..209053Clytia hemisphaericaexon
TCONS_00007609-exon-sc0000078-1491911889:208323..208490TCONS_00007609-exon-sc0000078-1491911889:208323..208490Clytia hemisphaericaexon
TCONS_00007609-exon-sc0000078-1491911889:203187..203243TCONS_00007609-exon-sc0000078-1491911889:203187..203243Clytia hemisphaericaexon
TCONS_00007609-exon-sc0000078-1491911889:201708..201905TCONS_00007609-exon-sc0000078-1491911889:201708..201905Clytia hemisphaericaexon
TCONS_00007609-exon-sc0000078-1491911889:201540..201650TCONS_00007609-exon-sc0000078-1491911889:201540..201650Clytia hemisphaericaexon
TCONS_00007609-exon-sc0000078-1491911889:200366..200976TCONS_00007609-exon-sc0000078-1491911889:200366..200976Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007609-proteinTCONS_00007609-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000078supercontigsc0000078:200366..209053 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0707493	0	0.0803677	0.0978399	0.2706	9.42093	10.1733	7.88678	5.3389	8.159	6.88545	6.41749	7.7921	1.07113	1.6137	18.0277	23.4182	11.0673	10.9355	41.983	40.4424	4.8664	7.78972	12.0738	11.5403	5.96896	7.06034	0	0.0820439
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR007237CD20-like
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007609 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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