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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007649 ID=TCONS_00007649|Name=TCONS_00007649|organism=Clytia hemisphaerica|type=transcript|length=915bp
TTTACCTATAAGGTCAAAGACTTGGATGAAATCAAAAAGCTTTTTCAGTG
CAAACACCCAAACAAGACATTGAAAGAATTTGTTACTAGAAATGTTATAT
TTTCTGACCTGAACATAATTGTGTTAAatctggttgatatctggttgATA
TATTGTCTAAAATTAAATGGCCGGCTTTCCTTTTTGCTTTTTACCCtagt
ttatttctttttaatcaGTTATTAGTCAGTCGGGTAAAACTTTCCATACA
ATAAATAATCACCTATGTGGTATCGTTGAAAACTCTAAGCGAGATCAAGA
TTGGAATTCGAAATGGATCGGATGCCAATATCCCAATTGTTAAGTGTGGC
CACATGAAATGCGCCGGTATTACTATGCCAACGGCAGTTAAGCGTGTAAC
TTGGACATGCCCGATGTATAAACCTAGACCACCACCTGCATCcccacaaa
aagaaaagaaaacgaaGCTGAGTAAGAAAAAGTAGTTCAACAATTGAAAT
TTCTTGTTATTGTTAATGTTTTGATTCAAATGACCATTCTGAAATAACAG
AACAACGCCAGTTTCGGGGTCGAAAAAGTCCAAACAGCAGACACTGACAT
GGACACTTCACAAACAAGCAACGCTCTAGGAAAACAACTAAGACAGCAAA
TAAATGAGGAAGATGGACCCAATCGCAAAAGAATGCGTGAAATGCCCCTC
CGCTCGAGGACAAAACCGAGTAGAGATAAGTATTGGGGAGGGAGACCTGT
TTAAAAAACCATATAATCAATCACGCTTTACTACAATCTTCCCATCACTT
TCATGATACCtaatataaaaattgaaattttatcatgaatagcgctccgc
aatgcatacgtcataattattactttttactttttttgacatttgtacga
gttgcaatcccacaa Run BLAST on NCBI transcript from alignment at sc0000078:105701..106615 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007649 ID=TCONS_00007649|Name=TCONS_00007649|organism=Clytia hemisphaerica|type=transcript|length=915bp|location=Sequence derived from alignment at sc0000078:105701..106615 (Clytia hemisphaerica)
ttgtgggattgcaactcgtacaaatgtcaaaaaaagtaaaaagtaataat
tatgacgtatgcattgcggagcgctattcatgataaaatttcaattttta
tattaGGTATCATGAAAGTGATGGGAAGATTGTAGTAAAGCGTGATTGAT
TATATGGTTTTTTAAACAGGTCTCCCTCCCCAATACTTATCTCTACTCGG
TTTTGTCCTCGAGCGGAGGGGCATTTCACGCATTCTTTTGCGATTGGGTC
CATCTTCCTCATTTATTTGCTGTCTTAGTTGTTTTCCTAGAGCGTTGCTT
GTTTGTGAAGTGTCCATGTCAGTGTCTGCTGTTTGGACTTTTTCGACCCC
GAAACTGGCGTTGTTCTGTTATTTCAGAATGGTCATTTGAATCAAAACAT
TAACAATAACAAGAAATTTCAATTGTTGAACTACTTTTTCTTACTCAGCt
tcgttttcttttctttttgtgggGATGCAGGTGGTGGTCTAGGTTTATAC
ATCGGGCATGTCCAAGTTACACGCTTAACTGCCGTTGGCATAGTAATACC
GGCGCATTTCATGTGGCCACACTTAACAATTGGGATATTGGCATCCGATC
CATTTCGAATTCCAATCTTGATCTCGCTTAGAGTTTTCAACGATACCACA
TAGGTGATTATTTATTGTATGGAAAGTTTTACCCGACTGACTAATAACtg
attaaaaagaaataaactaGGGTAAAAAGCAAAAAGGAAAGCCGGCCATT
TAATTTTAGACAATATATcaaccagatatcaaccagatTTAACACAATTA
TGTTCAGGTCAGAAAATATAACATTTCTAGTAACAAATTCTTTCAATGTC
TTGTTTGGGTGTTTGCACTGAAAAAGCTTTTTGATTTCATCCAAGTCTTT
GACCTTATAGGTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007649-exon-sc0000078-1491911889:105701..106615 | TCONS_00007649-exon-sc0000078-1491911889:105701..106615 | Clytia hemisphaerica | exon |
| TCONS_00007649-exon-sc0000078-1510915933:105701..106615 | TCONS_00007649-exon-sc0000078-1510915933:105701..106615 | Clytia hemisphaerica | exon |
| TCONS_00007649-exon-sc0000078-1575043694:105701..106615 | TCONS_00007649-exon-sc0000078-1575043694:105701..106615 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078 | supercontig | sc0000078:105701..106615 . |
Blast
The following BLAST results are available for this feature:
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