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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007663 ID=TCONS_00007663|Name=TCONS_00007663|organism=Clytia hemisphaerica|type=transcript|length=1403bp
ACCAATTTTACGAAGGAGCCATCTTGGAAAAGTTATTTTAGTCGCACCCC
TTTCAAGCATGTTTTCATCAAAGACTGTTTGAACCAACTTGCATATATGA
GTTTGCTGTTTGCTTTGGCGTCAGGACAACATTTAGTTTACAAACGACAA
AACATTtaaattaacaaattttagcTATTATTCACTCACGGGAAGAACAT
TACTAAGGTTGGACGAAAAGGCTTCTAATAGATATGAAGTTTAACTAAAG
AGGTTTGCGAATCAGGACTAGATTGGACATCAAACAACAGAAGAGAATAC
AACCTTTACTTGACTAGCCTGGAGGCCACGTCAtcgcaaaaatcataaaa
aagcaaagttcagctaGGAATAGACTCTACTCTAGTTCCTGGTCTAACNA
tcgcaaaaatcataaaaaaacaaagttcAGCTAGGAATAGACTCTACTCT
AGTTCCTGGTCTAACTAACGATGACATTTCTAACTCTTCTAAGTACCTTA
ATGCTCACAGCATTATGTTTCTCACACAATGGTTCAACAAACTGTTTGTA
CGAGAAACAGATCTTTATTGTCTTAGACGTTGGTTTACTGGTTTTGACTA
ATCCATACCGTATATGGTACTCGTATGATTTACTGATGAATCAATTGACG
AGACGCTCATGTAACAAAATTTGGTTGtactcaaaactcaaaaaagactG
GATACAACTTTCAAATGAAagcgaaattcaaattttttttgattatgATG
CATTGGTTATGGCGTCGCAAATCGTCGATGCAAATGAATTGGAAGAAGCA
ACTTTGAATTTAACTATAAACTACGAAATGAATCAAAGAACGTTAATTTA
TATCCATGATGAACAAGATCGTGATAATCCACAATCAAATAACAACTCCT
TGGACATTGCTGAAAGACTTGTACGGATACAAAATATAGAGAatcaaaag
gttttttttagtTGCCTGGGAAATATCTTTGGCGACATAATTAGTTCACT
TTGCAACACTATGCAACAAAAACTACCAAAAAGACAGTTCTTGTATTTAC
CCTATGCTTATTCCAAGTGGGCACAAATGATGGCATTCAAACACACCTTT
GATGATTTGGAAAACCCGAATCTTCAGtatgaaaatatcaaatgtgTTGA
CAGATATGATCGTGTTCCTATCTTCTTTGTATTCAGCTACGAGGGTATCA
GTAATTTGCTCAATTACATCGGCCTTTCCACTATCTTAAGAAGAGAGATT
GATAAATTTGAGGCAATAGATGTTCTCCAGTACGACCGAGATGAGTTTTG
GATTCAAAAACAAGTCAAAGGTTGCCGAACTCAAAAATATATAAGACGGC
CATGGGAGATTTATGATTACATACCAAGCAGATCAAATAAGGTGAGAATC
AAT Run BLAST on NCBI protein sequence of TCONS_00007663-protein >TCONS_00007663-protein ID=TCONS_00007663-protein|Name=TCONS_00007663-protein|organism=Clytia hemisphaerica|type=polypeptide|length=311bp
MTFLTLLSTLMLTALCFSHNGSTNCLYEKQIFIVLDVGLLVLTNPYRIWY
SYDLLMNQLTRRSCNKIWLYSKLKKDWIQLSNESEIQIFFDYDALVMASQ
IVDANELEEATLNLTINYEMNQRTLIYIHDEQDRDNPQSNNNSLDIAERL
VRIQNIENQKVFFSCLGNIFGDIISSLCNTMQQKLPKRQFLYLPYAYSKW
AQMMAFKHTFDDLENPNLQYENIKCVDRYDRVPIFFVFSYEGISNLLNYI
GLSTILRREIDKFEAIDVLQYDRDEFWIQKQVKGCRTQKYIRRPWEIYDY
IPSRSNKVRIN Run BLAST on NCBI transcript from alignment at sc0000078:316725..318127 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007663 ID=TCONS_00007663|Name=TCONS_00007663|organism=Clytia hemisphaerica|type=transcript|length=1403bp|location=Sequence derived from alignment at sc0000078:316725..318127 (Clytia hemisphaerica)
ATTGATTCTCACCTTATTTGATCTGCTTGGTATGTAATCATAAATCTCCC
ATGGCCGTCTTATATATTTTTGAGTTCGGCAACCTTTGACTTGTTTTTGA
ATCCAAAACTCATCTCGGTCGTACTGGAGAACATCTATTGCCTCAAATTT
ATCAATCTCTCTTCTTAAGATAGTGGAAAGGCCGATGTAATTGAGCAAAT
TACTGATACCCTCGTAGCTGAATACAAAGAAGATAGGAACACGATCATAT
CTGTCAAcacatttgatattttcataCTGAAGATTCGGGTTTTCCAAATC
ATCAAAGGTGTGTTTGAATGCCATCATTTGTGCCCACTTGGAATAAGCAT
AGGGTAAATACAAGAACTGTCTTTTTGGTAGTTTTTGTTGCATAGTGTTG
CAAAGTGAACTAATTATGTCGCCAAAGATATTTCCCAGGCAactaaaaaa
aaccttttgatTCTCTATATTTTGTATCCGTACAAGTCTTTCAGCAATGT
CCAAGGAGTTGTTATTTGATTGTGGATTATCACGATCTTGTTCATCATGG
ATATAAATTAACGTTCTTTGATTCATTTCGTAGTTTATAGTTAAATTCAA
AGTTGCTTCTTCCAATTCATTTGCATCGACGATTTGCGACGCCATAACCA
ATGCATcataatcaaaaaaaatttgaatttcgctTTCATTTGAAAGTTGT
ATCCagtcttttttgagttttgagtaCAACCAAATTTTGTTACATGAGCG
TCTCGTCAATTGATTCATCAGTAAATCATACGAGTACCATATACGGTATG
GATTAGTCAAAACCAGTAAACCAACGTCTAAGACAATAAAGATCTGTTTC
TCGTACAAACAGTTTGTTGAACCATTGTGTGAGAAACATAATGCTGTGAG
CATTAAGGTACTTAGAAGAGTTAGAAATGTCATCGTTAGTTAGACCAGGA
ACTAGAGTAGAGTCTATTCCTAGCTgaactttgtttttttatgatttttg
cgaTNGTTAGACCAGGAACTAGAGTAGAGTCTATTCCtagctgaactttg
cttttttatgatttttgcgaTGACGTGGCCTCCAGGCTAGTCAAGTAAAG
GTTGTATTCTCTTCTGTTGTTTGATGTCCAATCTAGTCCTGATTCGCAAA
CCTCTTTAGTTAAACTTCATATCTATTAGAAGCCTTTTCGTCCAACCTTA
GTAATGTTCTTCCCGTGAGTGAATAATAgctaaaatttgttaatttaAAT
GTTTTGTCGTTTGTAAACTAAATGTTGTCCTGACGCCAAAGCAAACAGCA
AACTCATATATGCAAGTTGGTTCAAACAGTCTTTGATGAAAACATGCTTG
AAAGGGGTGCGACTAAAATAACTTTTCCAAGATGGCTCCTTCGTAAAATT
GGT Coding sequence (CDS) from alignment at sc0000078:316725..318127 >TCONS_00007663 ID=TCONS_00007663|Name=TCONS_00007663|organism=Clytia hemisphaerica|type=CDS|length=933bp|location=Sequence derived from alignment at sc0000078:316725..318127 (Clytia hemisphaerica)
ATTGATTCTCACCTTATTTGATCTGCTTGGTATGTAATCATAAATCTCCC
ATGGCCGTCTTATATATTTTTGAGTTCGGCAACCTTTGACTTGTTTTTGA
ATCCAAAACTCATCTCGGTCGTACTGGAGAACATCTATTGCCTCAAATTT
ATCAATCTCTCTTCTTAAGATAGTGGAAAGGCCGATGTAATTGAGCAAAT
TACTGATACCCTCGTAGCTGAATACAAAGAAGATAGGAACACGATCATAT
CTGTCAAcacatttgatattttcataCTGAAGATTCGGGTTTTCCAAATC
ATCAAAGGTGTGTTTGAATGCCATCATTTGTGCCCACTTGGAATAAGCAT
AGGGTAAATACAAGAACTGTCTTTTTGGTAGTTTTTGTTGCATAGTGTTG
CAAAGTGAACTAATTATGTCGCCAAAGATATTTCCCAGGCAactaaaaaa
aaccttttgatTCTCTATATTTTGTATCCGTACAAGTCTTTCAGCAATGT
CCAAGGAGTTGTTATTTGATTGTGGATTATCACGATCTTGTTCATCATGG
ATATAAATTAACGTTCTTTGATTCATTTCGTAGTTTATAGTTAAATTCAA
AGTTGCTTCTTCCAATTCATTTGCATCGACGATTTGCGACGCCATAACCA
ATGCATcataatcaaaaaaaatttgaatttcgctTTCATTTGAAAGTTGT
ATCCagtcttttttgagttttgagtaCAACCAAATTTTGTTACATGAGCG
TCTCGTCAATTGATTCATCAGTAAATCATACGAGTACCATATACGGTATG
GATTAGTCAAAACCAGTAAACCAACGTCTAAGACAATAAAGATCTGTTTC
TCGTACAAACAGTTTGTTGAACCATTGTGTGAGAAACATAATGCTGTGAG
CATTAAGGTACTTAGAAGAGTTAGAAATGTCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007663-exon-sc0000078-1491911889:316725..318127 | TCONS_00007663-exon-sc0000078-1491911889:316725..318127 | Clytia hemisphaerica | exon |
| TCONS_00007663-exon-sc0000078-1510915933:316725..318127 | TCONS_00007663-exon-sc0000078-1510915933:316725..318127 | Clytia hemisphaerica | exon |
| TCONS_00007663-exon-sc0000078-1575043694:316725..318127 | TCONS_00007663-exon-sc0000078-1575043694:316725..318127 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078 | supercontig | sc0000078:316725..318127 . |
Blast
The following BLAST results are available for this feature:
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