|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007685 ID=TCONS_00007685|Name=TCONS_00007685|organism=Clytia hemisphaerica|type=transcript|length=3977bp
ttttagatGAGctagatataaaaaaaaacaaaaaaacttcgaaaccAAAC
GATAACAAAAATGTCTTTGAAGACGTTTTCGTTGAGGCGTAAATCACCCG
CAGCGCCCGAGACCGCCCAGTTCTTTGATACAACATCCGAAGATCAAACA
TCTTCATTGAAACGAGGTGACGAGAAACGAATCATGCTCATGAATATGGT
CAAAGAAGGTAAATTGTCAGTGGACGGTGCTTTACAACGAGCTTACGGAA
TGGGTATTGCCTCCGTCCCTTACGAAGAACTGGACCAGGACAATTGTACG
GCACCGAAAGAAGAGCAAATCTACAATTTCGGTGTACATCGTTACGGCAG
AAATAACAAATCAACTAAATGTGTCGTCCAAATTGATTTCGAAGAAGATT
CTCTTTCGTTATTACAACGTGGACAGAAATTGAAAAGTTTCCCGTTCACT
GCGCTGAAATCAGTTGTTGGAGGGGACGATTCGCCGCGTCTTCAAATTCA
GTTTGACGATCTCAATGAGATAGATATTGACGCTGGAACACTTGAAGAAA
AGAATAAGATTTCTCGATTGTTGTTATTGATCATAGGTCAAATACAAACA
GGTTTTCCCGTCTTGAGTGAGGATGTAGTCGAGAAGCGAAAATCTCCGGT
CAAAGAAGGCGTTTTAGAGAAGAAAGGACATAGTGCTGCATTTTTGATGT
GGCCCAAGCGCTTTGTTCAATTGTTCCCTGGAGAAATGATTTATTATCGG
GTCGGCGAAGAGAAAAACGAAAGTTCCGCATTGAGTATTGTGTCTCTTCT
ACCGGACGAGTGTGATGTTCGGAAGTTGGATGAGAACGGTTTTACATTGG
TGACGTCACAGAAAGAATACGCATTTCGCCTGTCCTCCAACAAAAGCGAA
GAGATTGAAAAGGAGCGAAATGATTGGATGATCGCGCTTCAGACGGCCAT
TCGCGGTCGCGTGGACGTCGACGACGTTCAACCTCAACTCCATCAACAGA
GAACGCAAAGCCAAAACGCGTTTCACCAAGAAGAGTATTTGAAATCGATC
GCTAGCTCTTTGAACGATGAACTCGAACAATTAGGCGTTATTCTTAATAT
CATCGATGCTCCTATTCGCGCTTCGACACAAGTCACAAAAGTCCGCGAAA
TTGTCCAATCTCTTAACAACCAAATCAACACTGGTCTTCTCTCATGGACA
TTACGTCATGCTCGTAATCAACGTTTATCAATGTCTGCTCCGGACAATGA
AGATGACATCAACGATATGACGTCACCTTACGTCAACCGACCGATCATAA
GTGGCCAATCAAAAGGTGTCGATTTCACAGCCAATTCATCTCAATCCGCC
TCAAATACACTTATATTACCCACAAACCAACGCGAGCTTCAACACGTCAC
GCAACAATTAATCGATCGTGATTTCGCACAGGACTCGCGCTATTTTCCGT
ATCCTAATTACCGACCCTCTTCGTCAGCCGGAACTCCCCCGGTAGAGGGT
GAAGACGGTCCTTACAAACTATACGTACCAGTCAGTGGAGCTGGTTTTCA
CGCTCAAATCGCTAATGATCAATACGCTAAAGTCAAcaagaaaatcaaac
aaaaacgtTGCAACCCTTACGTCAATATCGAACGCAGATACCATGATTTG
CGATTATGGGGTGAGGAAGCACCACCTCTTCCTCCCAAAGATCCATCGCT
AGAAACTGATGAGTCAAGGAAGGATGAAGAGACTGTTCAAGAAATTACCA
AACAGAAAAATTACGTTCCCATTAAAATTCAACCTCCTCCAGAGTCCAAA
GTGGAGATTGAACAAACACGTGATAAAGCCTTGTCGTTAAGCTCTACCGT
CTCGCAGGCAGGAAGTGCCGTTACGCCGAATGTCCCCGCCccaccaccac
ctccaccagGTGCGGGTGGTATACCGGCTCCCCCACCACCGCCCGGAACG
ATGGTTAGCGGAGTCCCACCGAAAGAAGATGTTATACCGGGCTGCAAAAT
GAGACCTTTGTTTTGGTCAAAGATTCCGGATGCTCAAATCAAACAGACTG
TTTGGAAAGATGCGACCGACCGTTTGAATAATCTCGATACAACGAAAATA
GAAGAATTATTTCATCTATCTCAATCTACCGAAACACCCAGGGCTAATGA
AGAACCAGATGGCTTACCAATAGAAGATAAGAACGCTTCGAAATCTTTAC
TTGATCCAAAGAAAGCTCAGAATCTTGGTATTTTCCTGTCTGGTTTCAAA
CTCGATGTCAACGATCTTGAATCTAAGCTTTCGACATTTGATGATGAAAA
CGGTTTGACGTCTGAAGAAATCAACGCCTTGAAACGTTTCCAACCAACAC
CTGAAGAAATCGAGATGTTCAAAAGTTTCAAAGGTAATTTCGATAAATTA
GTCAAAGTTGATAAATTCGTACAGAAAATGTGTAATATTACGAATTTGAA
CTCTCGCTTGGACGTTTTGTTGACCATTCGTGAGATACCTGACCAAATAC
AAGGAATCGAACCACCCATCACAAACCTGATCAAAGCTTGCCGTAGTTTG
AGAGATAACCAACATTTTAAAACACTCCTTGAATATATTTTATCCATTGG
TAATTATCTGAACGGCGGTACCAACCGCGGCCGCGCGTACGGTTTCAAAT
TGAGCGCTCTGGTCAAATTGGTCGATATCCGTAGCACAGATAAGAAACAG
ACCGCTTTACAGTTCCTTGCCGAGGAACTCTACCAGAAGGATCCAAAAGT
GTTAACTTGTTATAAAGAGATGAACTCCTTGCTTATTCCGATAGACATCT
CGATCAAAGGGCTTACAGCTGAAGTCGATATCATGAGTAAGGacattgaa
aaattgaagaaacagATGTCCACGTTGTCATCAAGTTTCGATGAAGCTTT
TATCCACAAAGTGAACCAATTTATCAAAACAGAATCTAGTAAATTAGTTC
TCTTACAACAACATTGTTCAGAGATTGTTGAACTTTCCGTTGAATTAAAG
AGAATGTACGGAGAAAGTTCATCATCGGATTTCGAGAACTGGTTAAACCA
CGTCAGCGATTTTATCAAGCAGCTCCAACGTGCCACTGAAGCTGCAGAAG
CCAAACAACGTCGATTGACCAACCGTCAAAAACATAAAGCCGATCTTGAT
AAAGTAGTCAGTGAACTGGCAAACACTGTCAAAAACGCATCCATTGAAAC
GAGCAATAATCAAAAACCTGGCAAACAGAAACAGAGTCATCGGCGCAACG
AATCGTACGAAAAGATCATCTCACATACCACCTTACAACAAGCAGCAGTA
ACCAAAACCGAAGGAGCTGGTTTCACCAGTAAACCTGTCACTTTCAATCT
CGGTAATGCCACCGTATTAGAGCTTCAACCATCAGAAAGTATGGAAGAAC
TTTCTTTCCCTTCCAAAACAGGATGGCTTGAAAAGTTAAGTGGTGGCAAA
AAACGGAATTGTAAATGGGATTACCGTTTTTTTGAACTGACAACTACCGG
TTATTTACATTATTCGAAACGGGAAGACGGGAAGTTGTCCGGAGCCATCT
ATATCCGGCAATCACCGGTCAAAGTTGATGAGAATGATCCTTGCATTATG
GAGATTCATCACGAGCAAAGGGTCTGGAAACTGAGAGGTGATAATGAATT
GGAAGTCAGTGATTGGTTGAATGCTTTGAATTACTATTCGAAACGAGACA
GTGTCTTGCAAGATGACTTCGAGTAGAATTTTTATTATGGGCTCATTCAT
ATTTTTAAGGAATATTAGTATTATGATTATCAACATTATATACAGTAGAT
TTAGGATCAATGAATCTTTCAGCCTCGTGGGGAAAGAcctatttttttcg
gatgatatacatgttttttataagcatactaaatttaaaaacaggtttgg
agatgcttaggtcgaggGCTTGGCAAGGCTTAAAAATGCTTATAAGGATG
CTTATATCCCAATTAAGATTTTAGGAA Run BLAST on NCBI protein sequence of TCONS_00007685-protein >TCONS_00007685-protein ID=TCONS_00007685-protein|Name=TCONS_00007685-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1221bp
MSLKTFSLRRKSPAAPETAQFFDTTSEDQTSSLKRGDEKRIMLMNMVKEG
KLSVDGALQRAYGMGIASVPYEELDQDNCTAPKEEQIYNFGVHRYGRNNK
STKCVVQIDFEEDSLSLLQRGQKLKSFPFTALKSVVGGDDSPRLQIQFDD
LNEIDIDAGTLEEKNKISRLLLLIIGQIQTGFPVLSEDVVEKRKSPVKEG
VLEKKGHSAAFLMWPKRFVQLFPGEMIYYRVGEEKNESSALSIVSLLPDE
CDVRKLDENGFTLVTSQKEYAFRLSSNKSEEIEKERNDWMIALQTAIRGR
VDVDDVQPQLHQQRTQSQNAFHQEEYLKSIASSLNDELEQLGVILNIIDA
PIRASTQVTKVREIVQSLNNQINTGLLSWTLRHARNQRLSMSAPDNEDDI
NDMTSPYVNRPIISGQSKGVDFTANSSQSASNTLILPTNQRELQHVTQQL
IDRDFAQDSRYFPYPNYRPSSSAGTPPVEGEDGPYKLYVPVSGAGFHAQI
ANDQYAKVNKKIKQKRCNPYVNIERRYHDLRLWGEEAPPLPPKDPSLETD
ESRKDEETVQEITKQKNYVPIKIQPPPESKVEIEQTRDKALSLSSTVSQA
GSAVTPNVPAPPPPPPGAGGIPAPPPPPGTMVSGVPPKEDVIPGCKMRPL
FWSKIPDAQIKQTVWKDATDRLNNLDTTKIEELFHLSQSTETPRANEEPD
GLPIEDKNASKSLLDPKKAQNLGIFLSGFKLDVNDLESKLSTFDDENGLT
SEEINALKRFQPTPEEIEMFKSFKGNFDKLVKVDKFVQKMCNITNLNSRL
DVLLTIREIPDQIQGIEPPITNLIKACRSLRDNQHFKTLLEYILSIGNYL
NGGTNRGRAYGFKLSALVKLVDIRSTDKKQTALQFLAEELYQKDPKVLTC
YKEMNSLLIPIDISIKGLTAEVDIMSKDIEKLKKQMSTLSSSFDEAFIHK
VNQFIKTESSKLVLLQQHCSEIVELSVELKRMYGESSSSDFENWLNHVSD
FIKQLQRATEAAEAKQRRLTNRQKHKADLDKVVSELANTVKNASIETSNN
QKPGKQKQSHRRNESYEKIISHTTLQQAAVTKTEGAGFTSKPVTFNLGNA
TVLELQPSESMEELSFPSKTGWLEKLSGGKKRNCKWDYRFFELTTTGYLH
YSKREDGKLSGAIYIRQSPVKVDENDPCIMEIHHEQRVWKLRGDNELEVS
DWLNALNYYSKRDSVLQDDFE Run BLAST on NCBI transcript from alignment at sc0000079:66328..71219+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007685 ID=TCONS_00007685|Name=TCONS_00007685|organism=Clytia hemisphaerica|type=transcript|length=4892bp|location=Sequence derived from alignment at sc0000079:66328..71219+ (Clytia hemisphaerica)
ttttagatGAGctagatataaaaaaaaacaaaaaaacttcgaaaccAAAC
GATAACAAAAATGTCTTTGAAGACGTTTTCGTTGAGGCGTAAATCACCCG
CAGCGCCCGAGACCGCCCAGTTCTTTGATACAACATCCGAAGATCAAACA
TCTTCATTGAAACGAGGTGACGAGAAACGAATCATGCTCATGAATATGGT
CAAAGAAGGTAAGGATTAATCACTGAGTTTGAAGTCTGAAAGACTAGAGA
GGaacctttaacctttctcaagcaagaaaaggCAAAGTCTTGTGATTCCC
GCCGCATTTAAacacccttgtctcacagcGCCAGTGGAagttttttcctc
agtggggataaaaattgctattgaaatcctaatgggggtagaaattctat
tgttccaaagtgAGAAAAtctagtggggatggttttggagtgcaattttt
aaacatggaatttcgagtggggatgaaataaaatcgatttcccagtgggg
ctaaaaatcaagggtattttcccaccggggacgaaatttttgcttaattt
tccagtggggctgggaacccagcgggtctgtgacacaggggtgtatttaa
aAAGACTGATTTAATCTAGCTCTTTCTTTGTCTTCACGTggcatattttt
tcaaaatctgttttGTGAAAGTCACGTGTTTCAGATGGGAAATAAAGTGA
CTTCTTTTTCCATAAAGTGTTTCATCTCTAGACCCTTCAATGCTTAACAC
TCGATGGggtaaatttaattttatttggatttgaaaaataagaCCCATCG
AACTCGTATATATCTCCCTTTTGTCAATTAAGATGCCATTTCAGTTATGG
GGAAGTAAGCTTTTTTgaaagattacatcattataTCTTAATCATGTCAT
CAACGATACTAAGTTTTTTTTACCCAAAATGTCAATTCATTATTTGACGC
TTTATGgcaaaatttcgagttattcAAGTCATCagaaattttcgttttta
tctGAATAAATGACTGATTCTTCTATAATAACAATGTACCCGCAAAGTGT
CGAACATCAGCACACGCCAAAATCaatattgattaaaaaagtcctatcta
ttttaattgttcttaaatttcagGTAAATTGTCAGTGGACGGTGCTTTAC
AACGAGCTTACGGAATGGGTATTGCCTCCGTCCCTTACGAAGAACTGGAC
CAGGACAATTGTACGGCACCGAAAGAAGAGCAAATCTACAATTTCGGTGT
ACATCGTTACGGCAGAAATAACAAATCAACTAAATGTGTCGTCCAAATTG
ATTTCGAAGAAGATTCTCTTTCGTTATTACAACGTGGACAGAAATTGAAA
AGTTTCCCGTTCACTGCGCTGAAATCAGTTGTTGGAGGGGACGATTCGCC
GCGTCTTCAAATTCAGTTTGACGATCTCAATGAGATAGATATTGACGCTG
GAACACTTGAAGAAAAGAATAAGATTTCTCGATTGTTGTTATTGATCATA
GGTCAAATACAAACAGGTTTTCCCGTCTTGAGTGAGGATGTAGTCGAGAA
GCGAAAATCTCCGGTCAAAGAAGGCGTTTTAGAGAAGAAAGGACATAGTG
CTGCATTTTTGATGTGGCCCAAGCGCTTTGTTCAATTGTTCCCTGGAGAA
ATGATTTATTATCGGGTCGGCGAAGAGAAAAACGAAAGTTCCGCATTGAG
TATTGTGTCTCTTCTACCGGACGAGTGTGATGTTCGGAAGTTGGATGAGA
ACGGTTTTACATTGGTGACGTCACAGAAAGAATACGCATTTCGCCTGTCC
TCCAACAAAAGCGAAGAGATTGAAAAGGAGCGAAATGATTGGATGATCGC
GCTTCAGACGGCCATTCGCGGTCGCGTGGACGTCGACGACGTTCAACCTC
AACTCCATCAACAGAGAACGCAAAGCCAAAACGCGTTTCACCAAGAAGAG
TATTTGAAATCGATCGCTAGCTCTTTGAACGATGAACTCGAACAATTAGG
CGTTATTCTTAATATCATCGATGCTCCTATTCGCGCTTCGACACAAGTCA
CAAAAGTCCGCGAAATTGTCCAATCTCTTAACAACCAAATCAACACTGGT
CTTCTCTCATGGACATTACGTCATGCTCGTAATCAACGTTTATCAATGTC
TGCTCCGGACAATGAAGATGACATCAACGATATGACGTCACCTTACGTCA
ACCGACCGATCATAAGTGGCCAATCAAAAGGTGTCGATTTCACAGCCAAT
TCATCTCAATCCGCCTCAAATACACTTATATTACCCACAAACCAACGCGA
GCTTCAACACGTCACGCAACAATTAATCGATCGTGATTTCGCACAGGACT
CGCGCTATTTTCCGTATCCTAATTACCGACCCTCTTCGTCAGCCGGAACT
CCCCCGGTAGAGGGTGAAGACGGTCCTTACAAACTATACGTACCAGTCAG
TGGAGCTGGTTTTCACGCTCAAATCGCTAATGATCAATACGCTAAAGTCA
AcaagaaaatcaaacaaaaacgtTGCAACCCTTACGTCAATATCGAACGC
AGATACCATGATTTGCGATTATGGGGTGAGGAAGCACCACCTCTTCCTCC
CAAAGATCCATCGCTAGAAACTGATGAGTCAAGGAAGGATGAAGAGACTG
TTCAAGAAATTACCAAACAGAAAAATTACGTTCCCATTAAAATTCAACCT
CCTCCAGAGTCCAAAGTGGAGATTGAACAAACACGTGATAAAGCCTTGTC
GTTAAGCTCTACCGTCTCGCAGGCAGGAAGTGCCGTTACGCCGAATGTCC
CCGCCccaccaccacctccaccagGTGCGGGTGGTATACCGGCTCCCCCA
CCACCGCCCGGAACGATGGTTAGCGGAGTCCCACCGAAAGAAGATGTTAT
ACCGGGCTGCAAAATGAGACCTTTGTTTTGGTCAAAGATTCCGGATGCTC
AAATCAAACAGACTGTTTGGAAAGATGCGACCGACCGTTTGAATAATCTC
GATACAACGAAAATAGAAGAATTATTTCATCTATCTCAATCTACCGAAAC
ACCCAGGGCTAATGAAGAACCAGATGGCTTACCAATAGAAGATAAGAACG
CTTCGAAATCTTTACTTGATCCAAAGAAAGCTCAGAATCTTGGTATTTTC
CTGTCTGGTTTCAAACTCGATGTCAACGATCTTGAATCTAAGCTTTCGAC
ATTTGATGATGAAAACGGTTTGACGTCTGAAGAAATCAACGCCTTGAAAC
GTTTCCAACCAACACCTGAAGAAATCGAGATGTTCAAAAGTTTCAAAGGT
AATTTCGATAAATTAGTCAAAGTTGATAAATTCGTACAGAAAATGTGTAA
TATTACGAATTTGAACTCTCGCTTGGACGTTTTGTTGACCATTCGTGAGA
TACCTGACCAAATACAAGGAATCGAACCACCCATCACAAACCTGATCAAA
GCTTGCCGTAGTTTGAGAGATAACCAACATTTTAAAACACTCCTTGAATA
TATTTTATCCATTGGTAATTATCTGAACGGCGGTACCAACCGCGGCCGCG
CGTACGGTTTCAAATTGAGCGCTCTGGTCAAATTGGTCGATATCCGTAGC
ACAGATAAGAAACAGACCGCTTTACAGTTCCTTGCCGAGGAACTCTACCA
GAAGGATCCAAAAGTGTTAACTTGTTATAAAGAGATGAACTCCTTGCTTA
TTCCGATAGACATCTCGATCAAAGGGCTTACAGCTGAAGTCGATATCATG
AGTAAGGacattgaaaaattgaagaaacagATGTCCACGTTGTCATCAAG
TTTCGATGAAGCTTTTATCCACAAAGTGAACCAATTTATCAAAACAGAAT
CTAGTAAATTAGTTCTCTTACAACAACATTGTTCAGAGATTGTTGAACTT
TCCGTTGAATTAAAGAGAATGTACGGAGAAAGTTCATCATCGGATTTCGA
GAACTGGTTAAACCACGTCAGCGATTTTATCAAGCAGCTCCAACGTGCCA
CTGAAGCTGCAGAAGCCAAACAACGTCGATTGACCAACCGTCAAAAACAT
AAAGCCGATCTTGATAAAGTAGTCAGTGAACTGGCAAACACTGTCAAAAA
CGCATCCATTGAAACGAGCAATAATCAAAAACCTGGCAAACAGAAACAGA
GTCATCGGCGCAACGAATCGTACGAAAAGATCATCTCACATACCACCTTA
CAACAAGCAGCAGTAACCAAAACCGAAGGAGCTGGTTTCACCAGTAAACC
TGTCACTTTCAATCTCGGTAATGCCACCGTATTAGAGCTTCAACCATCAG
AAAGTATGGAAGAACTTTCTTTCCCTTCCAAAACAGGATGGCTTGAAAAG
TTAAGTGGTGGCAAAAAACGGAATTGTAAATGGGATTACCGTTTTTTTGA
ACTGACAACTACCGGTTATTTACATTATTCGAAACGGGAAGACGGGAAGT
TGTCCGGAGCCATCTATATCCGGCAATCACCGGTCAAAGTTGATGAGAAT
GATCCTTGCATTATGGAGATTCATCACGAGCAAAGGGTCTGGAAACTGAG
AGGTGATAATGAATTGGAAGTCAGTGATTGGTTGAATGCTTTGAATTACT
ATTCGAAACGAGACAGTGTCTTGCAAGATGACTTCGAGTAGAATTTTTAT
TATGGGCTCATTCATATTTTTAAGGAATATTAGTATTATGATTATCAACA
TTATATACAGTAGATTTAGGATCAATGAATCTTTCAGCCTCGTGGGGAAA
GAcctatttttttcggatgatatacatgttttttataagcatactaaatt
taaaaacaggtttggagatgcttaggtcgaggGCTTGGCAAGGCTTAAAA
ATGCTTATAAGGATGCTTATATCCCAATTAAGATTTTAGGAA Coding sequence (CDS) from alignment at sc0000079:66328..71219+ >TCONS_00007685 ID=TCONS_00007685|Name=TCONS_00007685|organism=Clytia hemisphaerica|type=CDS|length=3666bp|location=Sequence derived from alignment at sc0000079:66328..71219+ (Clytia hemisphaerica)
ATGTCTTTGAAGACGTTTTCGTTGAGGCGTAAATCACCCGCAGCGCCCGA
GACCGCCCAGTTCTTTGATACAACATCCGAAGATCAAACATCTTCATTGA
AACGAGGTGACGAGAAACGAATCATGCTCATGAATATGGTCAAAGAAGGT
AAATTGTCAGTGGACGGTGCTTTACAACGAGCTTACGGAATGGGTATTGC
CTCCGTCCCTTACGAAGAACTGGACCAGGACAATTGTACGGCACCGAAAG
AAGAGCAAATCTACAATTTCGGTGTACATCGTTACGGCAGAAATAACAAA
TCAACTAAATGTGTCGTCCAAATTGATTTCGAAGAAGATTCTCTTTCGTT
ATTACAACGTGGACAGAAATTGAAAAGTTTCCCGTTCACTGCGCTGAAAT
CAGTTGTTGGAGGGGACGATTCGCCGCGTCTTCAAATTCAGTTTGACGAT
CTCAATGAGATAGATATTGACGCTGGAACACTTGAAGAAAAGAATAAGAT
TTCTCGATTGTTGTTATTGATCATAGGTCAAATACAAACAGGTTTTCCCG
TCTTGAGTGAGGATGTAGTCGAGAAGCGAAAATCTCCGGTCAAAGAAGGC
GTTTTAGAGAAGAAAGGACATAGTGCTGCATTTTTGATGTGGCCCAAGCG
CTTTGTTCAATTGTTCCCTGGAGAAATGATTTATTATCGGGTCGGCGAAG
AGAAAAACGAAAGTTCCGCATTGAGTATTGTGTCTCTTCTACCGGACGAG
TGTGATGTTCGGAAGTTGGATGAGAACGGTTTTACATTGGTGACGTCACA
GAAAGAATACGCATTTCGCCTGTCCTCCAACAAAAGCGAAGAGATTGAAA
AGGAGCGAAATGATTGGATGATCGCGCTTCAGACGGCCATTCGCGGTCGC
GTGGACGTCGACGACGTTCAACCTCAACTCCATCAACAGAGAACGCAAAG
CCAAAACGCGTTTCACCAAGAAGAGTATTTGAAATCGATCGCTAGCTCTT
TGAACGATGAACTCGAACAATTAGGCGTTATTCTTAATATCATCGATGCT
CCTATTCGCGCTTCGACACAAGTCACAAAAGTCCGCGAAATTGTCCAATC
TCTTAACAACCAAATCAACACTGGTCTTCTCTCATGGACATTACGTCATG
CTCGTAATCAACGTTTATCAATGTCTGCTCCGGACAATGAAGATGACATC
AACGATATGACGTCACCTTACGTCAACCGACCGATCATAAGTGGCCAATC
AAAAGGTGTCGATTTCACAGCCAATTCATCTCAATCCGCCTCAAATACAC
TTATATTACCCACAAACCAACGCGAGCTTCAACACGTCACGCAACAATTA
ATCGATCGTGATTTCGCACAGGACTCGCGCTATTTTCCGTATCCTAATTA
CCGACCCTCTTCGTCAGCCGGAACTCCCCCGGTAGAGGGTGAAGACGGTC
CTTACAAACTATACGTACCAGTCAGTGGAGCTGGTTTTCACGCTCAAATC
GCTAATGATCAATACGCTAAAGTCAAcaagaaaatcaaacaaaaacgtTG
CAACCCTTACGTCAATATCGAACGCAGATACCATGATTTGCGATTATGGG
GTGAGGAAGCACCACCTCTTCCTCCCAAAGATCCATCGCTAGAAACTGAT
GAGTCAAGGAAGGATGAAGAGACTGTTCAAGAAATTACCAAACAGAAAAA
TTACGTTCCCATTAAAATTCAACCTCCTCCAGAGTCCAAAGTGGAGATTG
AACAAACACGTGATAAAGCCTTGTCGTTAAGCTCTACCGTCTCGCAGGCA
GGAAGTGCCGTTACGCCGAATGTCCCCGCCccaccaccacctccaccagG
TGCGGGTGGTATACCGGCTCCCCCACCACCGCCCGGAACGATGGTTAGCG
GAGTCCCACCGAAAGAAGATGTTATACCGGGCTGCAAAATGAGACCTTTG
TTTTGGTCAAAGATTCCGGATGCTCAAATCAAACAGACTGTTTGGAAAGA
TGCGACCGACCGTTTGAATAATCTCGATACAACGAAAATAGAAGAATTAT
TTCATCTATCTCAATCTACCGAAACACCCAGGGCTAATGAAGAACCAGAT
GGCTTACCAATAGAAGATAAGAACGCTTCGAAATCTTTACTTGATCCAAA
GAAAGCTCAGAATCTTGGTATTTTCCTGTCTGGTTTCAAACTCGATGTCA
ACGATCTTGAATCTAAGCTTTCGACATTTGATGATGAAAACGGTTTGACG
TCTGAAGAAATCAACGCCTTGAAACGTTTCCAACCAACACCTGAAGAAAT
CGAGATGTTCAAAAGTTTCAAAGGTAATTTCGATAAATTAGTCAAAGTTG
ATAAATTCGTACAGAAAATGTGTAATATTACGAATTTGAACTCTCGCTTG
GACGTTTTGTTGACCATTCGTGAGATACCTGACCAAATACAAGGAATCGA
ACCACCCATCACAAACCTGATCAAAGCTTGCCGTAGTTTGAGAGATAACC
AACATTTTAAAACACTCCTTGAATATATTTTATCCATTGGTAATTATCTG
AACGGCGGTACCAACCGCGGCCGCGCGTACGGTTTCAAATTGAGCGCTCT
GGTCAAATTGGTCGATATCCGTAGCACAGATAAGAAACAGACCGCTTTAC
AGTTCCTTGCCGAGGAACTCTACCAGAAGGATCCAAAAGTGTTAACTTGT
TATAAAGAGATGAACTCCTTGCTTATTCCGATAGACATCTCGATCAAAGG
GCTTACAGCTGAAGTCGATATCATGAGTAAGGacattgaaaaattgaaga
aacagATGTCCACGTTGTCATCAAGTTTCGATGAAGCTTTTATCCACAAA
GTGAACCAATTTATCAAAACAGAATCTAGTAAATTAGTTCTCTTACAACA
ACATTGTTCAGAGATTGTTGAACTTTCCGTTGAATTAAAGAGAATGTACG
GAGAAAGTTCATCATCGGATTTCGAGAACTGGTTAAACCACGTCAGCGAT
TTTATCAAGCAGCTCCAACGTGCCACTGAAGCTGCAGAAGCCAAACAACG
TCGATTGACCAACCGTCAAAAACATAAAGCCGATCTTGATAAAGTAGTCA
GTGAACTGGCAAACACTGTCAAAAACGCATCCATTGAAACGAGCAATAAT
CAAAAACCTGGCAAACAGAAACAGAGTCATCGGCGCAACGAATCGTACGA
AAAGATCATCTCACATACCACCTTACAACAAGCAGCAGTAACCAAAACCG
AAGGAGCTGGTTTCACCAGTAAACCTGTCACTTTCAATCTCGGTAATGCC
ACCGTATTAGAGCTTCAACCATCAGAAAGTATGGAAGAACTTTCTTTCCC
TTCCAAAACAGGATGGCTTGAAAAGTTAAGTGGTGGCAAAAAACGGAATT
GTAAATGGGATTACCGTTTTTTTGAACTGACAACTACCGGTTATTTACAT
TATTCGAAACGGGAAGACGGGAAGTTGTCCGGAGCCATCTATATCCGGCA
ATCACCGGTCAAAGTTGATGAGAATGATCCTTGCATTATGGAGATTCATC
ACGAGCAAAGGGTCTGGAAACTGAGAGGTGATAATGAATTGGAAGTCAGT
GATTGGTTGAATGCTTTGAATTACTATTCGAAACGAGACAGTGTCTTGCA
AGATGACTTCGAGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007685-exon-sc0000079-1491911889:66328..66535 | TCONS_00007685-exon-sc0000079-1491911889:66328..66535 | Clytia hemisphaerica | exon |
| TCONS_00007685-exon-sc0000079-1510915933:66328..66535 | TCONS_00007685-exon-sc0000079-1510915933:66328..66535 | Clytia hemisphaerica | exon |
| TCONS_00007685-exon-sc0000079-1575043694:66328..66535 | TCONS_00007685-exon-sc0000079-1575043694:66328..66535 | Clytia hemisphaerica | exon |
| TCONS_00007685-exon-sc0000079-1491911889:67451..71219 | TCONS_00007685-exon-sc0000079-1491911889:67451..71219 | Clytia hemisphaerica | exon |
| TCONS_00007685-exon-sc0000079-1510915933:67451..71219 | TCONS_00007685-exon-sc0000079-1510915933:67451..71219 | Clytia hemisphaerica | exon |
| TCONS_00007685-exon-sc0000079-1575043694:67451..71219 | TCONS_00007685-exon-sc0000079-1575043694:67451..71219 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000079 | supercontig | sc0000079:66328..71219 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00007685 vs. Swiss-Prot (Human)
Match: DIAP1 (Protein diaphanous homolog 1 OS=Homo sapiens GN=DIAPH1 PE=1 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 1.045e-34 Identity = 119/412 (28.88%), Postives = 193/412 (46.84%), Query Frame = 1
Query: 1987 PGCKMRPLFWSKIPDAQIKQTVW--KDATDRLNNLDTTKIEELFH-----LSQSTETPRANEEPDG-----LPIEDKNASKSLLDPKKAQNLGIFLSGFKLDVNDLESKLSTFDDENGLTSEEINALKRFQPTPEEIEMFKSFKGNFDKLVKVDKFVQKMCNITNLNSRLDVLLTIREIPDQIQGIEPPITNLIKACRSLRDNQHFKTLLEYILSIGNYLNGGTNRGRAYGFKLSALVKLVDIRSTDKKQTALQFLAEELYQKDPKVLTCYKEMNSLLIPIDISIKGLTAEVDIMSKDIEKLKKQMSTLSSSFDE--AFIHKVNQFIKTESSKLVLLQQHCSEIVELSVEL--------KRMYGESSSSDFENWLNHVSDFIKQLQRATEAAEAKQR-RLTNRQKHKADLDK 3153
P ++R WSK+ + Q + K DR N ELF S T+T +A ++ +G + K +LD K AQNL IFL F++ ++++ + + E LT I L + P PE+++M K +D L + ++F M + L RL+ +L + +Q++ I+P I ++ AC LR ++ F LLE L +GNY+N G+ A+GF +S L KL D +STD+K T L FLAE P VL E+ + +S + L +D M K I +++ + ++ DE F+ K+ F+K + L+ S + L EL K++ E D N+ N +K+ Q+ E E +R +L + K L+K
Sbjct: 775 PEVQLRRPNWSKLVAEDLSQDCFWTKVKEDRFEN------NELFAKLTLTFSAQTKTSKAKKDQEGGEEKKSVQKKKVKELKVLDSKTAQNLSIFLGSFRMPYQEIKNVILEVN-EAVLTESMIQNLIKQMPEPEQLKMLSELKDEYDDLAESEQFGVVMGTVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKSESFSNLLEITLLVGNYMNAGSRNAGAFGFNISFLCKLRDTKSTDQKMTLLHFLAELCENDYPDVLKFPDELAHVEKASRVSAENLQKNLDQMKKQISDVERDVQNFPAATDEKDKFVEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGEYFLFDPKKLSVEEFFMDLHNFRNMFLQAVKENQKRRETEEKMRRAKLAKEKAEKERLEK 1179
The following BLAST results are available for this feature:
|
