TCONS_00007687 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007687
Unique NameTCONS_00007687
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3073

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007687 ID=TCONS_00007687|Name=TCONS_00007687|organism=Clytia hemisphaerica|type=transcript|length=3073bp
AGTAAGTGAGGAGAAAATACTACAGTGAAAACATGGATGTTGCCGATTTG
GATTTAGAGGATGGACTCATGGTAACACCAAGCGAAGCCTACGAATTTAC
CGTTCATTTATACGGCCGCAGTGATAGCACATCAACAAAATGTGTCCTAC
AGATTCACTATCACGAAAAGACTTTATCGTTATTACGTCATGGACAAAAA
GTTGAGAATTATTTGTTCAGCTCTTTGAGAGATGTCGTCGGAGATGATGA
AGTTCCGAGATTGAAAATACGATTCGATGATTTCAATCAACTTGATATTG
AGACTGGAACATTGGAGAAAAAGAATGAGATTTTTACATTATTAACACAA
ATCATTGATCAACAATATAGATCTGAAGACTCAAAAGAGGATGCCGTCGA
CCCTAGGAGCCACACCATCAAAGAAGGGATCCTTGACAAGAATGGCCATG
GTCTCTTCGCCTCCTTCATGTGGCAAGAAAGGTACGTCAAATTGTATCCT
GGTCGGATGGATTACCATCGTGTCAAGGCAACCAATCATGAAGGTCCTGC
TCTGAATCAGGTTCGACTAACCTCCAATAAATGCTCTATTCGAGCAGTTG
ACGAGAATACTTTGATACTCGGCACACCGAATAGAGATTATATATTTCGA
ATGAGAAAGCATGCTCACGTCGACCCTCGGACTATGCTTAATGACTGGAG
ATTGGCTTTTGAGAGAGCAATTCAAAAAGGTTCAAAAGAAGTCAGTTTGG
TGGACAAACGAAGATTACAACACGAAAACAGATTACCCATCAATAGAGGT
AAGGAAGACGAAGTACCTCAACCATGTGAAGTCGGAAAGCCTTCGCCAGC
AAATGAAGaaacaaagtttgaaaatgCCCAGAATGCTGCTATTACGCAAG
ATGATAAATCTGAAGCTTCAGCCATTTCAGCTGGAAATCAACAAACAGCA
AAGATAGAGAATGATTTTACAACCAACACAAAAGATGCCATTGGACAAGC
TCTACTGTCGATAGCTACTGCCAAAGAACCAACTTCATCCCAAAAGGCTC
TTCAAAGCGATGTAACTCCATCACCAAAACAACCAATTCCTACATCTGAA
CCATCCACAACTGAAcccattcataaaaaatcaagcACAGAGATATTGAA
AGAGACACTACCTGAAGCGACCAAATCTGAACCACAAATCAGTGCTTCAA
AACCTGACGCCAGCACATCTAGAACGTCATCACAACCAACATCCATTGTA
CCTAAGCCGCCTCCTTCGCCCGGAATTGGATCTGCCCCACCACCACCTCC
GCCTGGAAGTGGATCCgccccaccaccaccaccacctccaccaccgcCGC
CAGGATCATCGACAGCATCCATTGTTCACCTTCCACCGAAGAAAGATATC
ATTCCAAatcgaaaaatgaaaactctTCCCTGGTCAAAAGTTTCGGACGC
TCAAATCAATACATCATTTTGGGGAAATGCCACAGACCGTACAAATCAAa
tcgattttcaaaaacttgaaaagtcaTTTTACTTGAAATCTTCAGATACG
GAGAAAAAGGGAGCTCAAGAGCATCACGAGTCGCCAAAAcaagagaaaaa
gaaatcattACTTGATCCTAAGAAAGCACAAACAATagggattttattaa
aaaatccaGAATTGGAGcttgaaaatgtgaaaaaacgattGTCAAAATTT
GATGTAAAGAAAGACGGCTCGCTTGATGGTTTGACTTCTGAAGaaattaa
agcattaaaaatctGTGTGCCAACTGATGATGAAAGAAAATTGTTCCATA
ATAAGAAAGAGAATGAACTCGTCGATGTTGACAAGTTGGTGTTCGAGCTG
ACCACCATTGATCCGATCGTTTTACAAGATATGTTGGCAAACTTGCTTAT
TATCCGTGAAATCCCCGAGCAATTAAGAGGTATTGAGCCACCAATCACAA
ATGTTATCAATGGTTATAAATGTTTACGAGATAGCaaagattttaagaaa
ctcctCGAGTATATCTTATCCATTGGCAATTATATGAACGGTGGTACCAA
AGAGGGATGTGCTTATGGCTTTCGGCTAAGCGCGTTACTTAAACTAGCCG
AAATCAAGAGCGCAGATGAGAAAGAGTCGGTACTACAGTTCCTAGTTGAA
GAGCTTTACCATAAAGACGCCGAGGTATTTGCTTGTTATAAAGAGATGGG
CGATCTGCTTCAAATGAGAAATATTGATGACGTTAAACCTGAATTAAAGG
GCGTCGAAACAGAGCTGGTACAACTGAAAGGTCTTAAAGCCAGTCCTGGA
GGTTTCGATGAGCAGTTTGTTGAGCAAACAAAGGAATTCATTAATACCCA
ATCAAAAGAGCTTCTACGGTTACGACAATTATGGTGTAGCCAGGTTGAGA
ATCTATCTTCTCAACTTAAGAAAATGTTTGGCGAGTTCCCGTCTTCAAAT
ATGAAGAATTTTATGGAGATTGTCAttaggtttttgaaaaaatacagaAG
AATGGCACTTGAAGTTGAAGAGAAAGAACAATATATGCAAAAATGGAACa
aagaaaaagcaaacaaaggaCTTTGAATGTTAAAGCGATGGGAACCAAGA
CAatagcgtagacaagaggggcgcaaaatttgcgACATTGTAATTGTCTA
TtgataatataaaaatataattactgtgtcataaaaatctccTCTCCTAC
ACAAATATTGCGCCCTttttgtctacgctactgcatGACTGAATATTATT
CAAGGATAACAGTTCTAAGATGTTTTTCAAAGTAATCGGCTACCACCTAC
ATCGTCTGGAAGAGTATGGAGACTTATCCCCTGAACTTTTCTTTGTAAAT
CCCCTTATACCGATTATCTCTGTAATAATTctttaaaatcatttcaaatt
caattccgggttgataaaacaaatttcaaCCATCTTTTGGCTCATTATTC
TAATTCTCTTGCCTAGGGGGTTGTATTATTTATTAGTAATTGCggttaaa
aaaaagttggtatacTCATAATTATACTCCCTCTTCTCTCACAGACCCat
taggattttttcagctatTGGGG
Run BLAST on NCBI

transcript from alignment at sc0000079:85305..92344+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007687 ID=TCONS_00007687|Name=TCONS_00007687|organism=Clytia hemisphaerica|type=transcript|length=7040bp|location=Sequence derived from alignment at sc0000079:85305..92344+ (Clytia hemisphaerica)
AGTAAGTGAGGAGAAAATACTACAGTGAAAAGTAAGGTATACTTAAGTTA
CTTATTATATTGTTGGGGGTCTGGGGGATATGCGACATGGGTATGGTAAT
ATGTTTTTATCGTTAGTTCATTTTTAAACAAGAATGAGCGTCAATTTTAG
TGATGCTACacagaccccccccccccccNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNACCCCCCATCGTTGTGCTCAAAAACAGACACCCCATCG
TTGTACTCAAAAACATAGATGTCGAAAATCCGAACTTGATGACTGACTGG
ATTATATTTTCGAATTCTCGAGTGAGGAGGTACACACATTTTCTTGAGTT
CCACAAACCACGAGATTCTGAAGAGAATACCTGTTTCATCAAGTAAATTT
ATTGGTGTGCATctcttaaaaaattttttcctagTCACATCGTTAtacta
gttttttttttcaagtactCACTGCcttcgttttgtataagattcccaat
tactgcactaagattcttgtcacttttccggGATCTTTCCACTATTTTTC
TTAGGATAACtggcatgagattggaaaggttttgtttctaaaggtacgga
aaattTTGTGTTTACTCACGAAACTGACTAACTTTCTGAagcttattttt
tcaaataccCGGAGTCCTGCTCTTTTTCCGatagaaaagtggcaaaggaa
tctttgaacggaaatgggaatcttatacaaaactaCGGTATTTCGAATTG
TCATACTCTTTCGCTAGAGGATAAGCAGAAGCCTGTTTGTACTCACTACA
TGTCTAAGCACTTCCCTTTCTTGTAAAACTTCTTACTAAAACAAATGCCA
TCATTTCGTCTATGTATCTCGTCATTAAGCTGTAACTAAGGTAACGCTTG
ACTTTGATATTATAATCCATGTTGATTTAATATGAAGGTTTGATGATTGT
TTATACTGCTTGTATGTTTGATGTTGTGAGCGATATAAGTTATGTTCTGT
CACTTAGTCAGTTGTTTCATCGGAACTAGTCCGACCAAAGTATTTGAAAC
AGGTGTGTTTTGTACTTTGTACTATGCTTTTAGCTGGAGAACTACATTAT
GAGCAGTTTccaggatttttatttttagtttgaaggtttttttttggtaa
aaagttTGTCTGTTTGCTTACCCATCAATATTAAACTAAAGGTTATCTGT
TTACTGAATTGCCACAAATCTTTGttggaaaaacgaaaaaaagccGTTTT
GAATAAACCAATAAGGAAGTTTCTTGACTGATATGAAATACCATGTCTAA
TCTAAAACGGAAATTTTCTCTTGTTTACTTTAGCATGGATGTTGCCGATT
TGGATTTAGAGGATGGACTCATGGTAACACCAAGCGAAGCCTACGAATTT
ACCGTTCATTTATACGGCCGCAGTGATAGCACATCAACAAAATGTGTCCT
ACAGATTCACTATCACGAAAAGACTTTATCGTTATTACGTCATGGACAAA
AAGTTGAGAATTATTTGTTCAGCTCTTTGAGAGATGTCGTCGGAGATGAT
GAAGTTCCGAGATTGAAAATACGATTCGATGATTTCAATCAACTTGATAT
TGAGACTGGAACATTGGAGAAAAAGAATGAGATTTTTACATTATTAACAC
AAATCATTGATCAACAATATAGGTAGGATTATAGTTCTTGTATATATACT
TTCTTTTATAAGGGTTAATCATATAGGAANTACGGCCGTAGTAATAGCAC
ATCAACAAAATGTGTCCTACAGATTCACTACCACGAAAAGACTTTATCGT
TATTACGTCATGGACAAAAAGTTGAGAATTATTTGTTCAGCTCTTTGAGA
GATGTCGTCGGAGATGATGAAGTTCCGAGATTGAAAATACGATTTGATGA
TTTCAATCAACTTGATATTGAGACTGGAACATTGGAGAAAAAGAATGAGA
TTTTTACATTATTAACACAAATCATTGATCAACAATATAGGTAGGATTAT
AGTTCTTGTATATATACTTTCTTTTATAAGGGTAAATCATATAGGAACAA
GACAAGGGGCTGAATTTGAACTAACGACTAAGAAAAAATCGAAAGGAAGC
GTccaatttcagaaattttcgaaATGCATTCTGAATATTGTaagcatttt
aagaacattataaaaaCACTAACAAATATAAGAATAGCTCACCCTTAGTC
ATATTTACTGGTTCTTACGAAAAACGCGTATTCCAATCTAATATAACATT
TTGAATAACTTGAAACAGAATTGCGTACAttttagactagagtctacttc
tggctgaactttgtgAAGAACAGTGAAGCAGACTAGAGGATTTCGCCATC
TTAAAtcttttcactttcattttcaaaaattatatgaaaacatcaaaaca
ataaaatgttttctaaaattccATCGaagtttatgaaactataatgaaaa
ggagaaaatacctccaaaatttcaaaacattcgttTATTGGTCATGGTTT
TCTGTTTGATCTTGTGGCATgtatttgctaccacctcaagcaaagcaaaa
aaataaagtcGGCCAAATTACACCGGGCTACTTATCAgtgccatccagtc
tatcaaaaagctataagttGCCCTAATAAGTTACTTATATAACTATAAGT
TATTAGGGCTACGTACACTTCGGTATTCCCATACTGCATTTTCCATACGA
TGTTCAGAAATATATTTCTGCATTTGCAGCGACAAACTGATAATTTAAGA
CTTTTAAGCAAGTAAAATCATTTCCATAGATCTGAAGACTCAAAAGAGGA
TGCCGTCGACCCTAGGAGCCACACCATCAAAGAAGGGATCCTTGACAAGA
ATGGCCATGGTCTCTTCGCCTCCTTCATGTGGCAAGAAAGGTACGTCAAA
TTGTATCCTGGTCGGATGGATTACCATCGTGTCAAGGCAACCAATCATGA
AGGTCCTGCTCTGAATCAGGTTCGACTAACCTCCAATAAATGCTCTATTC
GAGCAGTTGACGAGAATACTTTGATACTCGGCACACCGAATAGAGATTAT
ATATTTCGAATGAGAAAGCATGCTCACGTCGACCCTCGGACTATGCTTAA
TGACTGGAGATTGGCTTTTGAGAGAGCAATTCAAAAAGGTTCAAAAGAAG
TCAGTTTGGTGGACAAACGAAGATTACAACACGAAAACAGATTACCCATC
AATAGAGGTAAGTAATAGTTTCAATATTCGTTAGTCTCCTTAGTCCCCTT
aggaaaaaaatcttaaaaaaactaaatcCCCGTTAGcgcaattttcattc
attacagCGGAGTCCAAATCGAAACACACGGCGGGGAACCCAAATTTGAG
CTAAGGACATTTCGAGATATGGAGTAAGGTGAACAAGGCTTTGTTAACTA
AAGGGACGAGAAGAgcttgttcgaattaaggaaatattcgagttatggag
gttcgagttaaagagactccactgtatatttTTGCCCCTCCACGTTGATA
ATTTCTCACACTAGAACCAGAGCAAGAAGTCAAACTGGTTTTGATGATAA
TCCTTTTGATCTTACAGAGGAGGATGACATTCTCCTCCCTCACTTTCTCC
CATCTCTTATTAAGTGATTTGCCTGAGCTCGAATGGTTGACCAAAAAGTT
TCATCCTTTGATAGACTCTGATTCGtattttattttagaatttataaaat
ataaaattttttaactAATTAAAACTTTAAGGTAAGGAAGACGAAGTACC
TCAACCATGTGAAGTCGGAAAGCCTTCGCCAGCAAATGAAGaaacaaagt
ttgaaaatgCCCAGAATGCTGCTATTACGCAAGATGATAAATCTGAAGCT
TCAGCCATTTCAGCTGGAAATCAACAAACAGCAAAGATAGAGAATGATTT
TACAACCAACACAAAAGATGCCATTGGACAAGCTCTACTGTCGATAGCTA
CTGCCAAAGAACCAACTTCATCCCAAAAGGCTCTTCAAAGCGATGTAACT
CCATCACCAAAACAACCAATTCCTACATCTGAACCATCCACAACTGAAcc
cattcataaaaaatcaagcACAGAGATATTGAAAGAGACACTACCTGAAG
CGACCAAATCTGAACCACAAATCAGTGCTTCAAAACCTGACGCCAGCACA
TCTAGAACGTCATCACAACCAACATCCATTGTACCTAAGCCGCCTCCTTC
GCCCGGAATTGGATCTGCCCCACCACCACCTCCGCCTGGAAGTGGATCCg
ccccaccaccaccaccacctccaccaccgcCGCCAGGATCATCGACAGCA
TCCATTGTTCACCTTCCACCGAAGAAAGATATCATTCCAAatcgaaaaat
gaaaactctTCCCTGGTCAAAAGTTTCGGACGCTCAAATCAATACATCAT
TTTGGGGAAATGCCACAGACCGTACAAATCAAatcgattttcaaaaactt
gaaaagtcaTTTTACTTGAAATCTTCAGATACGGAGAAAAAGGGAGCTCA
AGAGCATCACGAGTCGCCAAAAcaagagaaaaagaaatcattACTTGATC
CTAAGAAAGCACAAACAATagggattttattaaaaaatccaGAATTGGAG
cttgaaaatgtgaaaaaacgattGTCAAAATTTGATGTAAAGAAAGACGG
CTCGCTTGATGGTTTGACTTCTGAAGaaattaaagcattaaaaatctGTG
TGCCAACTGATGATGAAAGAAAATTGTTCCATAATAAGAAAGGTATGGTG
CAGTTAAAATTGATTATCTCAATAATCTATAGTAACTTTTTCGCCCGGGG
AGGGGTATTTGCTTTCAAAAACGACCTTATGTTTGGCCCAATAAATTAGG
TCTTTGAAATCTaatccttacagtgcagagaacaTTTAGCCAATTTGAGC
AAAATGGGTGAAAATCAACCCTTACggtccattttcttaaaaatacttGT
CCATTTGAAGGCAAAATATTTTAACATATTCCGAAATTTTTCTTCCCAAA
AAACTTCGGTATGCTCATTTTTTACACCCAGTGAACCCAtacagtgcact
ttttaaaACAGACCCTTAAGAGtcgcacgtacggtaggtcatttacctta
aGTGCCCCCAGGATTTTCCATAAGGGTGCTGCATTATGTTAAATTCAGTG
GTCATCTCAAAATTACTTTTAGTTACTTTTTAGTTTCTTTTTCAATAGAC
ATTTTCAGCGATGATTAAAAGTCTTGCGTCCTTTTTTTACAGTTAGAACa
acttttcagccaaattttagtttatgaaagtataatttttaataAGATTG
CGAATTCATTTTTATGATTTCAGAGAATGAACTCGTCGATGTTGACAAGT
TGGTGTTCGAGCTGACCACCATTGATCCGATCGTTTTACAAGATATGTTG
GCAAACTTGCTTATTATCCGTGAAATCCCCGAGCAATTAAGAGGTATAAA
CTTGAAACTATTCATGATCTGAGGCCTTGTTCGCACGAAACGATTCCGCT
TCGCTTCGGAACGAAATGCAGCCATGttacttgaatgtaaccaatataAT
GATATTTTGTATCTGTATCGTTAAGTGCGTCAAAGTACACTttcatttac
acgttttttaaaaactatataagaacacaaggcttcgatggccaagaCAA
TAAGtagaaattaaaaacattttatggctttgtggattctaaaacaccaa
atttttcagaaaaatatacaaaaaacttacaaaatagtgaaaaataagaa
tattttaagaacatttttaaaagtttcttttgttttcttttaataCTTTT
CCGGATACCCTGTCTAAACATGAAAAAACATATTGATTTCTTTTAGGTAT
TGAGCCACCAATCACAAATGTTATCAATGGTTATAAATGTTTACGAGATA
GCaaagattttaagaaactcctCGAGTATATCTTATCCATTGGCAATTAT
ATGAACGGTGGTACCAAAGAGGGATGTGCTTATGGCTTTCGGCTAAGCGC
GTTACTTAAACTAGCCGAAATCAAGAGCGCAGATGAGAAAGAGTCGGTAC
TACAGTTCCTAGTTGAAGAGCTTTACCATAAAGACGCCGAGGTATTTGCT
TGTTATAAAGAGATGGGCGATCTGCTTCAAATGAGAAATATTGATGACGT
TAAACCTGAATTAAAGGGCGTCGAAACAGAGCTGGTACAACTGAAAGGTC
TTAAAGCCAGTCCTGGAGGTTTCGATGAGCAGTTTGTTGAGCAAACAAAG
GAATTCATTAATACCCAATCAAAAGAGCTTCTACGGTTACGACAATTATG
GTGTAGCCAGGTTGAGAATCTATCTTCTCAACTTAAGAAAATGTTTGGCG
AGTTCCCGTCTTCAAATATGAAGAATTTTATGGAGATTGTCAttaggttt
ttgaaaaaatacagaAGAATGGCACTTGAAGTTGAAGAGAAAGAACAATA
TATGCAAAAATGGAACaaagaaaaagcaaacaaaggaCTTTGAATGTTAA
AGCGATGGGAACCAAGACAatagcgtagacaagaggggcgcaaaatttgc
gACATTGTAATTGTCTATtgataatataaaaatataattactgtgtcata
aaaatctccTCTCCTACACAAATATTGCGCCCTttttgtctacgctactg
catGACTGAATATTATTCAAGGATAACAGTTCTAAGATGTTTTTCAAAGT
AATCGGCTACCACCTACATCGTCTGGAAGAGTATGGAGACTTATCCCCTG
AACTTTTCTTTGTAAATCCCCTTATACCGATTATCTCTGTAATAATTctt
taaaatcatttcaaattcaattccgggttgataaaacaaatttcaaCCAT
CTTTTGGCTCATTATTCTAATTCTCTTGCCTAGGGGGTTGTATTATTTAT
TAGTAATTGCggttaaaaaaaagttggtatacTCATAATTATACTCCCTC
TTCTCTCACAGACCCattaggattttttcagctatTGGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004360XLOC_004360Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007687-exon-sc0000079-1491911889:85305..85335TCONS_00007687-exon-sc0000079-1491911889:85305..85335Clytia hemisphaericaexon
TCONS_00007687-exon-sc0000079-1510915933:85305..85335TCONS_00007687-exon-sc0000079-1510915933:85305..85335Clytia hemisphaericaexon
TCONS_00007687-exon-sc0000079-1575043694:85305..85335TCONS_00007687-exon-sc0000079-1575043694:85305..85335Clytia hemisphaericaexon
TCONS_00007687-exon-sc0000079-1491911889:86688..87026TCONS_00007687-exon-sc0000079-1491911889:86688..87026Clytia hemisphaericaexon
TCONS_00007687-exon-sc0000079-1510915933:86688..87026TCONS_00007687-exon-sc0000079-1510915933:86688..87026Clytia hemisphaericaexon
TCONS_00007687-exon-sc0000079-1575043694:86688..87026TCONS_00007687-exon-sc0000079-1575043694:86688..87026Clytia hemisphaericaexon
TCONS_00007687-exon-sc0000079-1491911889:88134..88561TCONS_00007687-exon-sc0000079-1491911889:88134..88561Clytia hemisphaericaexon
TCONS_00007687-exon-sc0000079-1510915933:88134..88561TCONS_00007687-exon-sc0000079-1510915933:88134..88561Clytia hemisphaericaexon
TCONS_00007687-exon-sc0000079-1575043694:88134..88561TCONS_00007687-exon-sc0000079-1575043694:88134..88561Clytia hemisphaericaexon
TCONS_00007687-exon-sc0000079-1491911889:89086..90096TCONS_00007687-exon-sc0000079-1491911889:89086..90096Clytia hemisphaericaexon
TCONS_00007687-exon-sc0000079-1510915933:89086..90096TCONS_00007687-exon-sc0000079-1510915933:89086..90096Clytia hemisphaericaexon
TCONS_00007687-exon-sc0000079-1575043694:89086..90096TCONS_00007687-exon-sc0000079-1575043694:89086..90096Clytia hemisphaericaexon
TCONS_00007687-exon-sc0000079-1491911889:90678..90797TCONS_00007687-exon-sc0000079-1491911889:90678..90797Clytia hemisphaericaexon
TCONS_00007687-exon-sc0000079-1510915933:90678..90797TCONS_00007687-exon-sc0000079-1510915933:90678..90797Clytia hemisphaericaexon
TCONS_00007687-exon-sc0000079-1575043694:90678..90797TCONS_00007687-exon-sc0000079-1575043694:90678..90797Clytia hemisphaericaexon
TCONS_00007687-exon-sc0000079-1491911889:91201..92344TCONS_00007687-exon-sc0000079-1491911889:91201..92344Clytia hemisphaericaexon
TCONS_00007687-exon-sc0000079-1510915933:91201..92344TCONS_00007687-exon-sc0000079-1510915933:91201..92344Clytia hemisphaericaexon
TCONS_00007687-exon-sc0000079-1575043694:91201..92344TCONS_00007687-exon-sc0000079-1575043694:91201..92344Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000079supercontigsc0000079:85305..92344 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.00927298	0	0	0.0139157	0	0.0340154	0.0574899	0.691563	5.65779	7.96714e-06	0.00855351	4.24768	0.758082	2.12685	3.34154	1.50367	2.07134	1.11346	0.708413	0.104466	4.8972e-05	0.000401023	3.23567	0.227749	0.116668	2.64603	0.650645	0.815147	0.0126009
Blast
[Close]
BLAST of TCONS_00007687 vs. Swiss-Prot (Human)
Match: DAAM1 (Disheveled-associated activator of morphogenesis 1 OS=Homo sapiens GN=DAAM1 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 4.610e-23
Identity = 96/369 (26.02%), Postives = 184/369 (49.86%), Query Frame = 3 
Query: 1404 PNRKMKTLPWSKVSDAQINTSFWGNATDRT--NQIDFQKLEKSF--------YLKSSDTEKKGAQ---EHHESPKQEKKKSLLDPKKAQTIGILLKNPELELENVKKRLSKFDVKKDGSLDGLTSEEIKALKICVPTDDERKLF--HNKKENELVDVDKLVFELTTIDPIVLQDMLANLLIIREIPEQLRGIEPPITNVINGYKCLRDSKDFKKLLEYILSIGNYMNGGTKEGCAYGFRLSALLKLAEIKSA-DEKESVLQFLVEELYHKDAEVFACYKEMGDLLQM---------RNIDDVKPELKGVETELVQLKGLKASPGGFDEQFVEQTKEFINTQSKELLRLRQLWCSQVENLSSQLKKMFGE 2435
            P   +K+  WSK+ + ++  + W    D      +D + LE++F        +  +S++++K A    +   S  + K+ S++D ++AQ   ILL   +L  + +K+ +   D ++D     L  + ++ L   VP   +  L   H  + + +   D+ +FE++ I+    Q  L +L   ++  E++  ++P +  + +G + +  S   K+LLE +L+ GNYMN G + G AYGF++S+L K+A+ KS+ D+  ++L +L+  + +K   V    +E+ D+ Q          + I  ++  LK VETEL   K     PG   ++FV    +FI   S     +  L  ++ ++L ++  K FGE
Sbjct:  606 PTNALKSFNWSKLPENKLEGTVWTEIDDTKVFKILDLEDLERTFSAYQRQQDFFVNSNSKQKEADAIDDTLSSKLKVKELSVIDGRRAQNCNILLSRLKLSNDEIKRAILTMDEQED-----LPKDMLEQLLKFVPEKSDIDLLEEHKHELDRMAKADRFLFEMSRINH--YQQRLQSLYFKKKFAERVAEVKPKVEAIRSGSEEVFRSGALKQLLEVVLAFGNYMNKGQR-GNAYGFKISSLNKIADTKSSIDKNITLLHYLITIVENKYPSVLNLNEELRDIPQAAKVNMTELDKEISTLRSGLKAVETELEYQKSQPPQPG---DKFVSVVSQFITVASFSFSDVEDL-LAEAKDLFTKAVKHFGE 962
The following BLAST results are available for this feature:
BLAST of TCONS_00007687 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DAAM14.610e-2326.02Disheveled-associated activator of morphogenesis 1... [more]
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