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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007732 ID=TCONS_00007732|Name=TCONS_00007732|organism=Clytia hemisphaerica|type=transcript|length=2083bp AGAAAAtgtaaatgttaaaaaaaaagaagtaaaacacattgataataaaa aagaaatatcaaCATGAATGACGAGCTGGGGATACAGTTGAAAGACACTC CTCTTTTggaAGAAGAAGACAAAAAAGCTCATgaTAACTTGACGATGTTA CTGACGAAGTTATGTCGACGTGTATCCGATCTTGAATTAGCTCTCGATCG CAAAGAAATAGAAATGTACAAACTACGAAATTACTGCTCAAAGAAATGTG ATCATTTTGAACGTACCATAGCTGAACTATCCAAAATACTTCCTAGGACA TGCTCGCATGATTCTATTCATCATAAAAAACAATTTAGAAAGAATTTTGG TAAAAGACTCAGTGAAACGGATGATTTTCTTCgtaacaacaacagcaaca acaataaTTGTGATTTTGAAAACTTGGAATCTCACCAACAACAACGGAAA CGTAGACAGATCAATGAAAACACATTCGAAAAATCGTCGTCCAACACACC AAATGATTCTCTGCACGATCCACCAATGGCGACAAGTGAACCTATTTCAC CACTGGATACAAATATACTTCATTTACGAACTGATCGTCAGAAAGAGACT TCAAAACTACACCGGCCCTTCATTGGATCAATCACCCAAAGAACTTCAGA ACTCGCGCACGACCAGAAGAGCACTAATGAGGAAAGAAATAAAACCTCTT CGAGTATCGAACAATTGCCTCGCCACATCTCTATTTACGATACATCTCAA GATGATATCGATGACCAAAGTAAAGACATTGATGACGATTTGAATGTCTC GCAAACCGATTCTGACATGCAGGTAGAAGTCGCATCTGTATGTGTCATCA GTAGTTCAGATGAGAGCAGAGACGATGATGGGAATCTGCTTCAAAGTCAC CAAAAAGGATCAAGAAGTagaaaatggtcaatctcaagTGAGGCAGGATC TAAACAAATAAGTGATGACATAAATAGTGTGTCACAATTTCTATCAACgg aagattttaattttgaccACAGACGTACTATTATCGGGGAAATGCCAATT CCAGAAGAGGagatcaataacaatcaaattGATTCACCATTTGCCAGAGA TGGGAAGATTACACTCAAAGAGTACCAACGAAGACGTCAAAATCATCTCG CCATGACCGAGAAGCCTTTAACACTAGAACATACCAATATGAACCAGAAT GACCAAGAAATTTCTAGATTGTCTCCAGAAATCAGTAATATTTCCCAAAT TAAACTCGgcgaaaaaacaaaagttacaGAAAGCTTTATTCAAGATAATA TTGACGACCAGCCAAGTAGCCAAAACGAGAACATTAGAAATCCTGGAACT AGCTTTGGGCAACAAAGTGATGATGAGAGCTTGAAATCCAATAAAAGTTC CTTCAAAGAAAGCAGTTCCTCTGAGGATGAAGATTCTAGCTCTTCTAGCA GTAGTGGTGAAAGTAGCTCCAGCGATGAAAGCTCTTCTGAGGGTCTCTCT GAACATGACGAAACAAGCTCTCAAATAGAAAGCCAAGATTGTGAAAATGT TGACTTTGACCTGATTGAATCAAAATTCGAAGTCTTGACTCCTGTCTGTA GCGTTTACCGATGGAATATATCAGAGTTTAGTAGTAAGCTGTTCCGAAGT GATTTAAAGGTGTTTTCAAAACCGTTCAAAGTGCGTGATATCGATAATTC AAATACGTTTGAATTAAAAATGACCTGGTTTAGTGAACTGAATGACGGTC TCTCTATCGAGCTACTGGAAAATGGAATTAATCCAAGAATCGAAATGAAT GTGATTCTGACTTGTGAAGGGAATGGTTATTTTAATAGTCAAACTCTGAT TGCCAATTCGAAACTGGATAAAGCATTTCTACATATTAACCATGTTAATG TTGCGACATCGGAATTTTGCAACTCAAAATCAGTCATGGATTTTATTGAA AACGATACACTTTTCATAAACTGCTATTTTGAGTTTTGCTAAACCTATTT TGAGTTTTGCTAGGACGATCACTGTTTACTTTACTATGCTATGAAATCTC TCTTCATGGCTCGTATGATATTCAAGTTTCTTT Run BLAST on NCBI protein sequence of TCONS_00007732-protein >TCONS_00007732-protein ID=TCONS_00007732-protein|Name=TCONS_00007732-protein|organism=Clytia hemisphaerica|type=polypeptide|length=642bp
MNDELGIQLKDTPLLEEEDKKAHDNLTMLLTKLCRRVSDLELALDRKEIE MYKLRNYCSKKCDHFERTIAELSKILPRTCSHDSIHHKKQFRKNFGKRLS ETDDFLRNNNSNNNNCDFENLESHQQQRKRRQINENTFEKSSSNTPNDSL HDPPMATSEPISPLDTNILHLRTDRQKETSKLHRPFIGSITQRTSELAHD QKSTNEERNKTSSSIEQLPRHISIYDTSQDDIDDQSKDIDDDLNVSQTDS DMQVEVASVCVISSSDESRDDDGNLLQSHQKGSRSRKWSISSEAGSKQIS DDINSVSQFLSTEDFNFDHRRTIIGEMPIPEEEINNNQIDSPFARDGKIT LKEYQRRRQNHLAMTEKPLTLEHTNMNQNDQEISRLSPEISNISQIKLGE KTKVTESFIQDNIDDQPSSQNENIRNPGTSFGQQSDDESLKSNKSSFKES SSSEDEDSSSSSSSGESSSSDESSSEGLSEHDETSSQIESQDCENVDFDL IESKFEVLTPVCSVYRWNISEFSSKLFRSDLKVFSKPFKVRDIDNSNTFE LKMTWFSELNDGLSIELLENGINPRIEMNVILTCEGNGYFNSQTLIANSK LDKAFLHINHVNVATSEFCNSKSVMDFIENDTLFINCYFEFC Run BLAST on NCBI transcript from alignment at sc0000079:401523..406119- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007732 ID=TCONS_00007732|Name=TCONS_00007732|organism=Clytia hemisphaerica|type=transcript|length=4597bp|location=Sequence derived from alignment at sc0000079:401523..406119- (Clytia hemisphaerica) AGAAAATGTAAATGTTAAAAAAAAAGAAGTAAAACACATTGATAATAAAA
AAGAAATATCAACATGAATGACGAGCTGGGGATACAGTTGAAAGACACTC
CTCTTTTGTAAGCTTTATTAACATTAAAATTATTATAAGTTTTGTTATAT
CATTTAAGGCGAGGCCAGTTTAATTTGTTGTTTTACGGGCCAAGCTACCC
AAAAAGAAGGGTCAGTCGATCGGCGAAAAAATAAAAATAAAAGTAGAATT
TTATCTAGATAAAATGTCTTAAAAAGGCAGCAAAAACTACTGCATTTTGA
CGAAAATGCGAAATAAAAATAAAAAGACACAAAAAGCTCGCAGAAGAAGA
ATAGAACATAACATTTTCAAAACTTTGGAAAAACTACACCAAAATTTTGA
AAATTTGACAGTCTCTAAAAAAATGAAAATAAAAATGTACTACCAAAATC
AGTTTAATTTTTATTTCGATTTTTGCAATTTCAGGGTCGGTCGGGCCCGT
AAAACAAATAATCAAATTGGTCTCACCTAAATGCATGATAAAAGTCTACA
ATGTAACTCTTATAAGAGAACTTATCTTCACAGTAGTTATTTGATTTGGT
TTTGCGACAACGTTTTTGATCAAGTCCTCGTGCAAAAGAATTTTTAATAT
TTTTGTTACCAGACTCGGCTGCATATTGAAATGCTTGGTGACAACTGTGA
TCCCAATTGAGCTGAGTGAGTCAATTTTAAGCATTTCTATCAGTTGGAAA
GGATAAGTACTGATCTATTGGTCGAAGAAATTGAAATTCTCAAAATNATC
AGTTGGAAAGGATAAGCACTGATCTATTGGTCGAAGAAATTGAAATTCTC
AAAATATTATGCATGAAACTAAAGAAACTGTATGTGACGAAAATTTCTTT
ATTTTCCTTTATTTTTTTTCAGGGAAGAAGAAGACAAAAAAGCTCATGTA
AGTAATTGATTTTCATTCAATTTAGCATTCTGTCAATCTTTGTTTTTGTT
GAATGAAAAATAATTTGCACCGTGATTTACATCATGGAAAAAAACAACAA
CAAAAACATCATAACTTTAGAGAATGATGATGACTTGTTTCTCTTTTGTA
TGAGATGCTTTCTATATTGAGCGGTCTAAGAGTTGTCTTGTTAGAACCGT
CTTACGCTGTAGTTTATATTGCATGCAAGCTTACCAGACTTTGAACCACT
AGGGAACAGAACAACACTCTCACCTCATGCATGATGTATAGGGGAATCGA
TTCTTAGCACTCTCGTGGACAGACTTCTTGAAGCCAATTGCCCTCACATG
GCATTGGTACGGCGAAGGTATCTCAGGTGGATAAATTTACGCGTAGAGAA
ATCAGGAAAGCGGCTTCTATTTTCCCCTAATTTCTTTCGCATTCATATTT
TGGGTTCATGATTTTAGATTTTTTCGCGGACTAAAATTCGCGAAAATTAA
TCCACACGAAATCTAATCCACTAAAGGTACACTTCCTTGCCAAGTGAATG
ACAGCACAAAGTGANCGTAGAGAAATCAGGAAAGCGGCTTCTATTTTCCC
CTAATTTCTTTCGCATTCATATTTTGGGTTATGGAGTTGAATCCCAACCT
CTTTTGGACGGTAGTCAAGATTGATAACCACTAAACTACTGGTGTCTTTA
CCCTTTTTCCTGACACACTGAAATGGTTTTTGAAAAGACTTTGAGTTTCA
TGGTTTATAACTTTTTAAAAGGTTCGACAAGATTTCTTTCATTGAACCGC
TGTGCACATTAAATAAAAAGGTTTTAGTTTTACATAAGTGTTCCCGTTTC
ATGTCAGACACATGACTCATCGGGACGGTGTCTTCCTATTGTTATATTAT
GCTGATATAAGCAAAAAAAATGTTTTTCTTTTCCTCTTTCTGACTAATCT
TGCTCCATATCCGTGTCAATCCAATGTGAAAAAGTTAAATTGAAATGACG
AGTAAGAAAACGATATCGCTCATTATTTAAAAACAAGACCTTGTTAAAGT
ACATATAAATAAAGAATCGTCATTTTTGAATTTTCAGGATAACTTGACGA
TGTTACTGACGAAGTTATGTCGACGTGTATCCGATCTTGAATTAGCTCTC
GATCGCAAAGAAATAGAAATGTACAAACTACGAAATTACTGCTCAAAGAA
ATGTGATCATTTTGAACGTACCATAGCTGAACTATCCAAAATACTTCCTA
GGACATGCTCGCATGATTCTATTCATCATAAAAAACAATTTAGAAAGAAT
TTTGGTAAAAGACTCAGTGAAACGGATGATTTTCTTCGTAACAACAACAG
CAACAACAATAATTGTGATTTTGAAAACTTGGAATCTCACCAACAACAAC
GGAAACGTAGACAGATCAATGAAAACACATTCGAAAAATCGTCGTCCAAC
ACACCAAATGATTCTCTGCACGATCCCACCGATANACATTCGAAAAATCG
TCGTCCAACACACCAAATGATTCTCTGCACGATCCACCAATGGCGACAAG
TGAACCTATTTCACCACTGGATACAAATATACTTCATTTACGAACTGATC
GTCAGAAAGAGACTTCAAAACTACACCGGCCCTTCATTGGATCAATCACC
CAAAGAACTTCAGGTAAGTGATTCAGGCCCGGCGGAAGCGGGGAGACTGA
GCTTCCTCACTTTTGAGCAAATGAGATTTTTTTATCAAGTTTCTAGCGAA
TTTTACCACATCTTTAGCCTTCAGCCTCTCCACTTTTACGGTTGTTCTGC
CGGATCTGTGATTGTTATTTATTAAGCTTTAATTTGGCCACTCCTGTCTG
CCTTACAGGAATTTGCTCATTTAAGCCAAAACAAAATTTAACTTCTCTTG
TGTACTCTGCAACTAGATTTTGTAAGCTGCAAAGGAGAATTCGGAATGCT
TATCCCTAATGGTCTTGAAGCAGTCGGAGGTAACCCAAAGGCTCCTCTTT
CGATAGCTGTCTACCCGGTAGGGAAGGGCGTCACTCTTTCGCCCTGGATT
GCTCCACTTACCCTTGATTCTTTCCTTAATTGCTGAGCATCAAGCAGAGC
ATTTTTGCGTACGAAGTTTTTGGTATGACCCGGCCAGGGATTGCACCAAT
AAGCTTACGCACCGCAGCTGGATACTCTACTTTCATGCTACTTAATTATG
CTTGATATTTCAGAACTCGCGCACGACCAGAAGAGCACTAATGAGGAAAG
AAATAAAACCTCTTCGAGTATCGAACAATTGCCTCGCCACATCTCTATTT
ACGATACATCTCAAGATGATATCGATGACCAAAGTAAAGACATTGATGAC
GATTTGAATGTCTCGCAAACCGATTCTGACATGCAGGTAGAAGTCGCATC
TGTATGTGTCATCAGTAGTTCAGATGAGAGCAGAGACGATGATGGGAATC
TGCTTCAAAGTCACCAAAAAGGATCAAGAAGTAGAAAATGGTCAATCTCA
AGTGAGGCAGGATCTAAACAAATAAGTGATGACATAAATAGTGTGTCACA
ATTTCTATCAACGGAAGATTTTAATTTTGACCACAGACGTACTATTATCG
GGGAAATGCCAATTCCAGAAGAGGAGATCAATAACAATCAAATTGATTCA
CCATTTGCCAGAGATGGGAAGATTACACTCAAAGAGTACCAACGAAGACG
TCAAAATCATCTCGCCATGACCGAGAAGCCTTTAACACTAGAACATACCA
ATATGAACCAGAATGACCAAGAAATTTCTAGATTGTCTCCAGAAATCAGT
AATATTTCCCAAATTAAACTCGGCGAAAAAACAAAAGTTACAGAAAGCTT
TATTCAAGATAATATTGACGACCAGCCAAGTAGCCAAAACGAGAACATTA
GAAATCCTGGAACTAGCTTTGGGCAACAAAGTGATGATGAGAGCTTGAAA
TCCAATAAAAGTTCCTTCAAAGAAAGCAGTTCCTCTGAGGATGAAGATTC
TAGCTCTTCTAGCAGTAGTGGTGAAAGTAGCTCCAGCGATGAAAGCTCTT
CTGAGGGTCTCTCTGAACATGACGAAACAAGCTCTCAAATAGAAAGCCAA
GATTGTGAAAATGTTGACTTTGACCTGATTGAATCAAAATTCGAAGTCTT
GACTCCTGTCTGTAGCGTTTACCGATGGAATATATCAGAGTTTAGTAGTA
AGCTGTTCCGAAGTGATTTAAAGGTGTTTTCAAAACCGTTCAAAGTGCGT
GATATCGATAATTCAAATACGTTTGAATTAAAAATGACCTGGTTTAGTGA
ACTGAATGACGGTCTCTCTATCGAGCTACTGGAAAATGGAATTAATCCAA
GAATCGAAATGAATGTGATTCTGACTTGTGAAGGGAATGGTTATTTTAAT
AGTCAAACTCTGATTGCCAATTCGAAACTGGATAAAGCATTTCTACATAT
TAACCATGTTAATGTTGCGACATCGGAATTTTGCAACTCAAAATCAGTCA
TGGATTTTATTGAAAACGATACACTTTTCATAAACTGCTATTTTGAGTTT
TGCTAAACCTATTTTGAGTTTTGCTAGGACGATCACTGTTTACTTTACTA
TGCTATGAAATCTCTCTTCATGGCTCGTATGATATTCAAGTTTCTTT Coding sequence (CDS) from alignment at sc0000079:401523..406119- >TCONS_00007732 ID=TCONS_00007732|Name=TCONS_00007732|organism=Clytia hemisphaerica|type=CDS|length=1929bp|location=Sequence derived from alignment at sc0000079:401523..406119- (Clytia hemisphaerica) ATGAATGACGAGCTGGGGATACAGTTGAAAGACACTCCTCTTTTGGAAGA AGAAGACAAAAAAGCTCATGATAACTTGACGATGTTACTGACGAAGTTAT GTCGACGTGTATCCGATCTTGAATTAGCTCTCGATCGCAAAGAAATAGAA ATGTACAAACTACGAAATTACTGCTCAAAGAAATGTGATCATTTTGAACG TACCATAGCTGAACTATCCAAAATACTTCCTAGGACATGCTCGCATGATT CTATTCATCATAAAAAACAATTTAGAAAGAATTTTGGTAAAAGACTCAGT GAAACGGATGATTTTCTTCGTAACAACAACAGCAACAACAATAATTGTGA TTTTGAAAACTTGGAATCTCACCAACAACAACGGAAACGTAGACAGATCA ATGAAAACACATTCGAAAAATCGTCGTCCAACACACCAAATGATTCTCTG CACGATCCACCAATGGCGACAAGTGAACCTATTTCACCACTGGATACAAA TATACTTCATTTACGAACTGATCGTCAGAAAGAGACTTCAAAACTACACC GGCCCTTCATTGGATCAATCACCCAAAGAACTTCAGAACTCGCGCACGAC CAGAAGAGCACTAATGAGGAAAGAAATAAAACCTCTTCGAGTATCGAACA ATTGCCTCGCCACATCTCTATTTACGATACATCTCAAGATGATATCGATG ACCAAAGTAAAGACATTGATGACGATTTGAATGTCTCGCAAACCGATTCT GACATGCAGGTAGAAGTCGCATCTGTATGTGTCATCAGTAGTTCAGATGA GAGCAGAGACGATGATGGGAATCTGCTTCAAAGTCACCAAAAAGGATCAA GAAGTAGAAAATGGTCAATCTCAAGTGAGGCAGGATCTAAACAAATAAGT GATGACATAAATAGTGTGTCACAATTTCTATCAACGGAAGATTTTAATTT TGACCACAGACGTACTATTATCGGGGAAATGCCAATTCCAGAAGAGGAGA TCAATAACAATCAAATTGATTCACCATTTGCCAGAGATGGGAAGATTACA CTCAAAGAGTACCAACGAAGACGTCAAAATCATCTCGCCATGACCGAGAA GCCTTTAACACTAGAACATACCAATATGAACCAGAATGACCAAGAAATTT CTAGATTGTCTCCAGAAATCAGTAATATTTCCCAAATTAAACTCGGCGAA AAAACAAAAGTTACAGAAAGCTTTATTCAAGATAATATTGACGACCAGCC AAGTAGCCAAAACGAGAACATTAGAAATCCTGGAACTAGCTTTGGGCAAC AAAGTGATGATGAGAGCTTGAAATCCAATAAAAGTTCCTTCAAAGAAAGC AGTTCCTCTGAGGATGAAGATTCTAGCTCTTCTAGCAGTAGTGGTGAAAG TAGCTCCAGCGATGAAAGCTCTTCTGAGGGTCTCTCTGAACATGACGAAA CAAGCTCTCAAATAGAAAGCCAAGATTGTGAAAATGTTGACTTTGACCTG ATTGAATCAAAATTCGAAGTCTTGACTCCTGTCTGTAGCGTTTACCGATG GAATATATCAGAGTTTAGTAGTAAGCTGTTCCGAAGTGATTTAAAGGTGT TTTCAAAACCGTTCAAAGTGCGTGATATCGATAATTCAAATACGTTTGAA TTAAAAATGACCTGGTTTAGTGAACTGAATGACGGTCTCTCTATCGAGCT ACTGGAAAATGGAATTAATCCAAGAATCGAAATGAATGTGATTCTGACTT GTGAAGGGAATGGTTATTTTAATAGTCAAACTCTGATTGCCAATTCGAAA CTGGATAAAGCATTTCTACATATTAACCATGTTAATGTTGCGACATCGGA ATTTTGCAACTCAAAATCAGTCATGGATTTTATTGAAAACGATACACTTT TCATAAACTGCTATTTTGAGTTTTGCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00007732-exon-sc0000079-1575043694:406013..406119 | TCONS_00007732-exon-sc0000079-1575043694:406013..406119 | Clytia hemisphaerica | exon |
TCONS_00007732-exon-sc0000079-1575043694:405173..405197 | TCONS_00007732-exon-sc0000079-1575043694:405173..405197 | Clytia hemisphaerica | exon |
TCONS_00007732-exon-sc0000079-1575043694:403742..404082 | TCONS_00007732-exon-sc0000079-1575043694:403742..404082 | Clytia hemisphaerica | exon |
TCONS_00007732-exon-sc0000079-1575043694:403507..403682 | TCONS_00007732-exon-sc0000079-1575043694:403507..403682 | Clytia hemisphaerica | exon |
TCONS_00007732-exon-sc0000079-1575043694:401523..402956 | TCONS_00007732-exon-sc0000079-1575043694:401523..402956 | Clytia hemisphaerica | exon |
TCONS_00007732-exon-sc0000079-1510915933:406013..406119 | TCONS_00007732-exon-sc0000079-1510915933:406013..406119 | Clytia hemisphaerica | exon |
TCONS_00007732-exon-sc0000079-1510915933:405173..405197 | TCONS_00007732-exon-sc0000079-1510915933:405173..405197 | Clytia hemisphaerica | exon |
TCONS_00007732-exon-sc0000079-1510915933:403742..404082 | TCONS_00007732-exon-sc0000079-1510915933:403742..404082 | Clytia hemisphaerica | exon |
TCONS_00007732-exon-sc0000079-1510915933:403507..403682 | TCONS_00007732-exon-sc0000079-1510915933:403507..403682 | Clytia hemisphaerica | exon |
TCONS_00007732-exon-sc0000079-1510915933:401523..402956 | TCONS_00007732-exon-sc0000079-1510915933:401523..402956 | Clytia hemisphaerica | exon |
TCONS_00007732-exon-sc0000079-1491911889:406013..406119 | TCONS_00007732-exon-sc0000079-1491911889:406013..406119 | Clytia hemisphaerica | exon |
TCONS_00007732-exon-sc0000079-1491911889:405173..405197 | TCONS_00007732-exon-sc0000079-1491911889:405173..405197 | Clytia hemisphaerica | exon |
TCONS_00007732-exon-sc0000079-1491911889:403742..404082 | TCONS_00007732-exon-sc0000079-1491911889:403742..404082 | Clytia hemisphaerica | exon |
TCONS_00007732-exon-sc0000079-1491911889:403507..403682 | TCONS_00007732-exon-sc0000079-1491911889:403507..403682 | Clytia hemisphaerica | exon |
TCONS_00007732-exon-sc0000079-1491911889:401523..402956 | TCONS_00007732-exon-sc0000079-1491911889:401523..402956 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000079 | supercontig | sc0000079:401523..406119 - |
Blast
The following BLAST results are available for this feature:
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