TCONS_00007743 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007743
Unique NameTCONS_00007743
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1985

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007743 ID=TCONS_00007743|Name=TCONS_00007743|organism=Clytia hemisphaerica|type=transcript|length=1985bp
ccaaaaatcaaaatcttcaacGCACGTGAAACTCGCCACCATCTTTAATT
TGTGTTTACGTTGATTTGGTCCATGGAATTTAGTGTTACCAAGAAGGCCT
ATCTACACCGTAGGTAAAAGAATAAAATAACAAAGGGCCTGTCTACACCA
CAACGTAAACAAACGCTGCTGGCTGAGCCTGGACTGGACTCTGCCTGTCT
GCTCTGACATTCTTAAGTTTTAACTCAAGAATCAAAGCTTGCACCAAGAT
GACAATCTACAACCTCTACATCTTTGATAGAAATGGAATTTGCCTATATT
ATCATGACTGGCAgcgaaaaaaatcttcaaatttaccCAGAGATGAGGAG
CAAAAATTGATGTatggaatgattttttctttgaaatctttcgTCACAAG
AATGTCTCCTATGGATACTAAGGATGCATTTGGTAGCTACCGAACAAGTA
CATACAAACTGAATTATTTAGAAGTACCGACTGGTTTGAAAATCGTTCTA
AACACAGATTTGAATATTGGCAAAATTGATGATGTTTTACATGAGATATA
TAAGatttatgtTGACTACGTCGTAAAGAATCCATTAACTGAAATGGGCG
AACCAATCGAAAGTGATCTTTTTGTCAGCAAGCTGAATAATTATGTGCAG
AATCAATCAATTTATTTCTAAAGTGATGAAATAAATGCAAACTGATGAAG
ACGCTTACAGTTTCAGTGTAGTATTCGTGATATTCACGATGTCATGTTTT
GTACGGAAGTATCCAAAATATCTCGGGCGTTTGCCacttattttaaattc
aaacaaTAAACCGTACTTACctttaacaatccaaaagtccCCCTAACAAT
CAAATGCGCCAGAATCGTGAAAACTCGGATATTGCTGCGGTATAGCCact
tttttgcgattttggcgcTTTTGATTGTTATGGGAGCGTTTGGATTTGGC
AAGTACAGAAATTAGTGGCAAATGCCCAAGCTACTTCTGGTGctcccaat
gaagtataagcccgaaaggctagaatcgaatctccttagTAGGATTTGAG
GCCtaccaaatcctaccaaagttgcgcggcctagcgcggtccgcctggtt
tttacacataTAACAGGTTGAAACTAAAATTCAcacctaaatttcgaaaa
agataatcactcgaaaacaaaggaatcgctagattcaatccgtcgtcaaa
aatacggcgcatgtttcaaggcttcactttttcttgcctgggaaaggtta
aagattggATTCTATactgcttccgtataaaacatttcGTTTACGTTAGA
ATATCAAGAATTTCTAAGGATGTTTAGAATGAACAGGGAAGCACCATTAT
GTGTGAAAGCACGACCGAATGATTTAAAGTGGATTGGATATATAATAGAA
TTGGAACTCGAATTGAACAAAAAGTTGTTTAACTGGACAATAGATGGAGA
CATCTTCTATAATGGGTATGCACAAAAAGTattatttgaacatttttaat
taaatggtttaaaaggaaaatgacttttttttatgTAATACTATGTATTT
TATTTAGTACACTATTCGAAACAAATTTGATACTTTATACCACAGGTCTC
GCAATTTGGTTTAGTTTGAATCATATATTGaactttttgcaaatattgtA
TTGGAGGAAAGATAGAATGAAATTAATTAAGGGAGCTAATTTTAGTGGAT
TtgacaaaattcaccaaaattaaaagaaattgtgCGCCCCTAATTTTTGC
CAACTCGCTCATTTTTAAACAACAGTTTATCCTACCATTCCACAAAATTA
GTTCTACAcagattagatttttttttacggtttttgctCCTCTCTCTAAA
GGTATATTCGCGTCATTGAAATAATGCAAAGCATTAGTTCACAATAGCAG
TTTACCATCGAGTACTAAAAGTTTATGATAAAATATTCTATTTACAATCA
TGATCAAATTATTTGAGACAAAGAGGAActcttgg
Run BLAST on NCBI

protein sequence of TCONS_00007743-protein

>TCONS_00007743-protein ID=TCONS_00007743-protein|Name=TCONS_00007743-protein|organism=Clytia hemisphaerica|type=polypeptide|length=140bp
MTIYNLYIFDRNGICLYYHDWQRKKSSNLPRDEEQKLMYGMIFSLKSFVT
RMSPMDTKDAFGSYRTSTYKLNYLEVPTGLKIVLNTDLNIGKIDDVLHEI
YKIYVDYVVKNPLTEMGEPIESDLFVSKLNNYVQNQSIYF
Run BLAST on NCBI

transcript from alignment at sc0000079:619963..627051-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007743 ID=TCONS_00007743|Name=TCONS_00007743|organism=Clytia hemisphaerica|type=transcript|length=7089bp|location=Sequence derived from alignment at sc0000079:619963..627051- (Clytia hemisphaerica)
CCAAAAATCAAAATCTTCAACGCACGTGAAACTCGCCACCATCTTTAATT
TGTGTTTACGTTGATTTGGTCCATGGAATTTAGTGTTACCAAGAAGGCCT
ATCTACACCGTAGGTAAAAGAATAAAATAACAAAGGGCCTGTCTACACCA
CAACGTAAACAAACGCTGCTGGCTGAGCCTGGACTGGACTCTGCCTGTCT
GCTCTGACATTCTTAAGTTTTAACTCAAGAATCAAAGCTTGCACCAAGAT
GACAATCTACAACCTCTACATCTTTGATAGAAATGGAATTTGCCTATATT
ATCATGACTGGCAGCGAAAAAAATCTTCAAATTTACCCAGAGATGAGGTT
TGTGGAAACAATTTATTTTTGCTTTCTTTTTTAGATTTCCCTCTTGTCTC
AAAAATGTGTGCAGTGTTTTTATTTTCGACTTCAACTTTCCAATCGTTTG
TGGTATAGTAAAAAATATGGTATTGGGCTCTTCCAGTTAAAGTCCTCCAT
TACAGAACAGACAGGGGGTGGACAACGGCGGAATTCCGAGGCAAAATGTT
TTTTTGAAATTCCTGGATTTCCAATATACAAAATCAGTAATGAATTTCTT
TGTATATATTTTACCTACCCCAAATATTTAGGAAGCTGAGTTTTAAACGA
ATCGTCAAGTTGAAATGAACGATAAATGTATCAATGTCTGTTTTATTTAC
CCCCTGGTGACTTAACAAAAGAGACTTAACTCGATGTTACAATCCAATTA
TTGAAAGTTTGTCTCGGCCTTTTTATAATGAGCGAGACATACGTTCTCAG
ATTACGCAATTTTCATATTGACATTTTCGAGGCATTTTGATGTAACTGTT
TGAGGGCTATGCATGTTAGCCTCCACTGATGCAAGTTACCCCATCTCACG
GTATGTGGAATAAGGACCCTTCCAGCGCTCTGGAAACGTCTCAAACAAAA
AGTGCCCCTTTTTTTCGTTCTCCGGAGCTTCGGAAGATTCCAGGGAACTT
CCTGCGTTCTGGAGCACGATTTTCTGCAATTGGTCTGCACCGAAACTCTG
GAACGTTTCGGTGCACTTCCGGTGTTCAGGAGCAAGATATCCGTGATATA
ATTACGATAGCGCTCGCTGTGCTATTAATGTGAAAACTTACTTCACACTC
GCATATTTTTAAAAGATCACCCAACTAACTCATGGAAGTGAAACCTCATG
TTTTTTATTTTTTTTCGATATTTCCACCAGTGATGCTTTCAAACATAAGT
GACAAAATCAATTTCATTAATGGCTGAGCCATCATATCAATATTTATTGA
AGGTTCCGGAGCGTCGGGAGGCTGGGAGGGTCCTGCAGGGTCCTGTGGAA
TTTCCAAAGGTTCAAATCAAAAAATTGAGTGGAATTCCCAAAGCACTATA
TGAAAAATTGACTGGATTTCTGAGTGCTTTTTTTATCTGAAAAATCCTGT
CGTCCACCCCCTATATCAATTTTTTTCTGGAAGAGCCCATTGTTGGAAAG
ATATTCAAAACAAATGGATTGTGCTTATACAGTATAACTCTCATTAGTAG
AAATACCTCCATTTAAAGCATATTAAAGTTCACAATAATGACTTTCTTTT
TATANGGAAATTTCCCATTTAAAGCATATTAAAGTTCACAATAATGACTC
TCTTTTTATAATGGAAACCAAACGAAAAAGAGCAATTCATTAAAATTAAA
AGTCAGCGCTCCGTGGTTGTGACATAGGTAATTATGGTAATTTTCACAGT
TTCTTGTTTCTACGTCATTTTTTAAACCTCTTAGTAGGAGAACGTGTTAT
TCTATAAGGAATTTTATAATACATCATGGCGGATTAAAAAGAGATTTAGA
AAACAAAAGTTTCTTTGTTTTTCATTTTCGCATTTNATAAGGAATTTTAT
AATACATCATGGCGGATTAAAAAGAGATTTAGAAAACAAAAGTTTCTTTG
TTTTTCATTTTCGCATTTATGGGGAAGAATGAAATTTTCAGAAGATACTT
TATTCGATATAAGGATTCCCATTTCTGTAAAATTGCGATTCCCCACTGCT
GCAAAATGTAGCTAATGGTAATTCCTTTGTTCTTTTGCTATTTTCTTTTG
TTCTATGTGACGTAAAGACGGTTCGCATATCAAAGTACTTCCACTAACTG
ACTCTAATTATAAAAGCTCTAAGAGAGCATCTACAATCATGGTCGAAATA
TATTGAGATTTTAGTGTATTTTATTAATGTTTTTTAGGATTTAAAGTTCG
GACGAGAATTGCTATTTTAGCACTACCACTTTCTTTCATTGAATATTTCG
ATTTTAGAGGGGTTTGGTGGCTTCTAGGCTATATTCCAAGCCTTATTCGA
GCAAATTTAAGCTTTTAAATCCTGAGATCCTAAGGTCCTAAGTCTTAAGT
CTCATTTTAAAACTCAGAGTTAAAAATCTACTTTCCAACTGTAGTTTCAG
GCGCTTAAAAATCATTTTTGGTGTTTAAAATTTTTCCGGGAACTCCCCTT
TGTCTCAAATATTTTGTCCATGATTGTAGTAACATAAAGGCCAGAATATG
ATCTTCAATTGGAATCAAAATTATAAAGTGCACCCACAAACATTAATTTG
TCAGATGTAACAAAATCAATAAAGGCACTGTCATCAAATTGACAACCAAA
CAAAGGATTTTCTGTCAAGAACCTGTAAACATTCCAACAACTTCCATACC
ATATGATATGCCATGACAAGTCGTATGCCACGTCTACCATTATAAAATTT
TTTAAAACAACACGCACAGTTTGAGGATTTGGCCTAAGTTGAAAAAGCCA
CCCGCAGCAGTGAAACAATAACACATTGTAGTAAATGTGACTGTCATTTT
TTGTGTGTGAGTATTAGAATTTATTTGACATGGCATCTTCTTGAAGAAAA
TACTTCTGAATTGTGAATTTTTTTACTTTATGCTGTTATATACATGTTTT
TTGATACTCTTTTGTGCTTATGTTAGGGGGGTCATTTTGCAATTTTTGGG
AAAAGAATCACCCCCATAGCATTTTAAAATGACCCTGCTCCAGCCCCATT
TTGCAGTACCCACCCCCTGCTTATTAATAGACTAAATGCCTGTCTTGATC
AGTTATATAAAAGAAAAATTTAGCAATTTTTGTGCGTCAAGCTTCTTTTT
ACTAAGGATAAAGGAATGTTAGTCGTAATAATAAAGTAACATAATATAAG
AATAAGCTCAAAAATGAAACTTCACCCCCTATAGCATTTTGTAATGACCC
CCCCCCCACTTAATGATTTTTTTCCAGAATACCCACCCCCTGCTTATTCT
ACCTACTACAATTAAGTACAAAAGAGTAGGTATACAAAAATCCCTAAAAC
TGGCCAGGAGATGCTTAGATTTAAGAATTGCTAAAATTTTTGCCTCACCT
GAGCCTCGCTATGCTTATAAAAAACATGTACGCTGTTTAATTTTTTAATT
GTCCTCTCATTTTCAGGAGCAAAAATTGATGTATGGAATGATTTTTTCTT
TGAAATCTTTCGTCACAAGAATGTCTCCTATGGATACGTATCTTTTCAAT
TGTTCAATATATATTTTATTTTTCCTTGAGAATAGCGTTTTTACTCCTTG
GACTGGCTGGACAAAATGTTGGTTTGCCGTCATTCGACAGACCCTACGTC
AAAAGCTGCCAACCCATTGTCATTTAAAAAAAAAAAAATTTTTCCTTCAA
CAGTCTCGTTCTATCTTAATTTTCTAAATCATGAATTTCCTTCAAGCTCT
TTTGCTCTCATTTCAAAATCACACAAATGTAAGCTGAATCATCAAAATCG
TCATTTTCTTCCCGACTGACTGACCCACCTTTAAAATCTAGGGTCGGGTG
ATGGCAAAACAACATTTTCTAAAGTCTAGCCTTGGTCAATTTAAAAAAAA
AGGCTGTATGTGTGGTCCCAATATGCTGTTAAATTTTGTTCTTAATTCGC
CTAGTATATAATTTTCTCAGCATTTTTTTTTCTTGTTTTCTGGTTCAGTT
GTTAAACATTTTCTATTTGAAAGATGGAGTTCAGTCTTCATCAACAGAAC
AACTGTGTCGCTTCTTCACAAATTAGAAATTAGTTGAAATTAATTGTTCC
GTCTCCTATCTTATTTACTTTAACTTTATCAATGAAAATTAAACGCCAGT
AAGGATGCATTTGGTAGCTACCGAACAAGTACATACAAACTGAATTATTT
AGAAGTACCGACTGGTTTGAAAATCGTTCTAAACACAGATTTGAATATTG
GCAAAATTGATGATGTTTTACATGAGATATATAAGGTATATAATATGTTC
AATTTCGTTCCCTGCGTATTTTATCGACCTTTTGACGCTTACTAAAAATG
GCATGAAACTGCCAGTAGTAGAATAAAAAAGTGTCTTTTCTTTCTGACTG
ACATCGCTCTACTTATGTATCGAGCACTGTAAAAGACTGATGAATTACTT
ACTACTATCCAGGGGGGGGGGTTGGTACTAAAATCCAAGACATATATGAG
TACTACAAGGTTTTTTGACGATTTTTNCTCAGAAACAGTCAAGACACTTT
TGCTCTGCTCTACTTTAGTTATTGCAAAGATTGATTGGTTATTTTTCACC
TCTAATTTACAGCTTGCTATTTCTTTTTTATCCAGTTATCCACGGTTCTT
TACAAAAAACAAAGCATTCAACTTCGAAAAAAATTTTTATTCCATAATAC
ATAAAAGCAGAACAATTAAATTGAAACATGGGTGTTTCACATCCCCAGAG
GAACCTTTTTCCTCAGTTGAGATAAAATTTCCTATTGAAATGCTAATGGG
GATTGAAATTCTATTGTTCCAAGGTTAAAAACCCAGTGGGGATATGGTTT
TGGAGTGCAATTTTTAAAAATGGAATTTTGAGTGTGGATGAAATCAAAGT
CAATTTCCCAGTGGGGCTGAAATTCAAGGGTATTTTACCACCGGGGACGT
ATTTAAGTCTTATATCGAGTTTTTATTTTTTCATTTTGCCTAAAATGCTC
AGTCATTAGTTAAATTTCCTAAAATTTGGTGGTTTTTAGTACTCGTGTAC
TAAAATTTTTCTTAGATTTCTTGAAGACCCCACCTAATTTGGGATTTTAG
TACACATGGTACTAAAATGCTTTTAGGCTTTTTTTGTAATACCACCACGT
CACTAAAAGTCATGATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNCCCCCCCCCCCCTGTACTATCCAGACTTTGACAGAATTTTTTTTTAA
TTTTTGCTCGAAATTTGTTTATACAATTTAAATTTATGTTGGGTTTGTAT
CTTAACCTAGGATTACCGTTAAAAGAATATTAGGATGATTTTCTTCAAAA
GGTTAAGAATATACAGTATACATCATGAAATGAGAAAAAGCATGTACCTG
TTTGGTTTTTAACAGGTTCATAACAGGGATAGAAGTAAATTTTATTGATT
TGTTATCAGCAAAGGCATAATAAACATGTAATGTATATTCAATCCAACTA
TTGTTGAACTTCACGTCAAGTTAATCTTTTCAATATTTGTTTGCTTTTCA
TTTTTTAGATTTATGTTGACTACGTCGTAAAGAATCCATTAACTGAAATG
GGCGAACCAATCGAAAGTGATCTTTTTGTCAGCAAGCTGAATAATTATGT
GCAGAATCAATCAATTTATTTCTAAAGTGATGAAATAAATGCAAACTGAT
GAAGACGCTTACAGTTTCAGTGTAGTATTCGTGATATTCACGATGTCATG
TTTTGTACGGAAGTATCCAAAATATCTCGGGCGTTTGCCACTTATTTTAA
ATTCAAACAATAAACCGTACTTACCTTTAACAATCCAAAAGTCCCCCTAA
CAATCAAATGCGCCAGAATCGTGAAAACTCGGATATTGCTGCGGTATAGC
CACTTTTTTGCGATTTTGGCGCTTTTGATTGTTATGGGAGCGTTTGGATT
TGGCAAGTACAGAAATTAGTGGCAAATGCCCAAGCTACTTCTGGTGCTCC
CAATGAAGTATAAGCCCGAAAGGCTAGAATCGAATCTCCTTAGTAGGATT
TGAGGCCTACCAAATCCTACCAAAGTTGCGCGGCCTAGCGCGGTCCGCCT
GGTTTTTACACATATAACAGGTTGAAACTAAAATTCACACCTAAATTTCG
AAAAAGATAATCACTCGAAAACAAAGGAATCGCTAGATTCAATCCGTCGT
CAAAAATACGGCGCATGTTTCAAGGCTTCACTTTTTCTTGCCTGGGAAAG
GTTAAAGATTGGATTCTATACTGCTTCCGTATAAAACATTTCGTTTACGT
TAGAATATCAAGAATTTCTAAGGATGTTTAGAATGAACAGGGAAGCACCA
TTATGTGTGAAAGCACGACCGAATGATTTAAAGTGGATTGGATATATAAT
AGAATTGGAACTCGAATTGAACAAAAAGTTGTTTAACTGGACAATAGATG
GAGACATCTTCTATAATGGGTATGCACAAAAAGTATTATTTGAACATTTT
TAATTAAATGGTTTAAAAGGAAAATGACTTTTTTTTATGTAATACTATGT
ATTTTATTTAGTACACTATTCGAAACAAATTTGATACTTTATACCACAGG
TCTCGCAATTTGGTTTAGTTTGAATCATATATTGAACTTTTTGCAAATAT
TGTATTGGAGGAAAGATAGAATGAAATTAATTAAGGGAGCTAATTTTAGT
GGATTTGACAAAATTCACCAAAATTAAAAGAAATTGTGCGCCCCTAATTT
TTGCCAACTCGCTCATTTTTAAACAACAGTTTATCCTACCATTCCACAAA
ATTAGTTCTACACAGATTAGATTTTTTTTTACGGTTTTTGCTCCTCTCTC
TAAAGGTATATTCGCGTCATTGAAATAATGCAAAGCATTAGTTCACAATA
GCAGTTTACCATCGAGTACTAAAAGTTTATGATAAAATATTCTATTTACA
ATCATGATCAAATTATTTGAGACAAAGAGGAACTCTTGG

Coding sequence (CDS) from alignment at sc0000079:619963..627051-

>TCONS_00007743 ID=TCONS_00007743|Name=TCONS_00007743|organism=Clytia hemisphaerica|type=CDS|length=1692bp|location=Sequence derived from alignment at sc0000079:619963..627051- (Clytia hemisphaerica)
ATTTATGTTGACTACGTCGTAAAGAATCCATTAACTGAAATGGGCGAACC
AATCGAAAGTGATCTTTTTGTCAGCAAGCTGAATAATTATGTGCAGAATC
AATCAATTTATTTCTAATAAGGATGCATTTGGTAGCTACCGAACAAGTAC
ATACAAACTGAATTATTTAGAAGTACCGACTGGTTTGAAAATCGTTCTAA
ACACAGATTTGAATATTGGCAAAATTGATGATGTTTTACATGAGATATAT
AAGGAGCAAAAATTGATGTATGGAATGATTTTTTCTTTGAAATCTTTCGT
CACAAGAATGTCTCCTATGGATACATGACAATCTACAACCTCTACATCTT
TGATAGAAATGGAATTTGCCTATATTATCATGACTGGCAGCGAAAAAAAT
CTTCAAATTTACCCAGAGATGAGATTTATGTTGACTACGTCGTAAAGAAT
CCATTAACTGAAATGGGCGAACCAATCGAAAGTGATCTTTTTGTCAGCAA
GCTGAATAATTATGTGCAGAATCAATCAATTTATTTCTAATAAGGATGCA
TTTGGTAGCTACCGAACAAGTACATACAAACTGAATTATTTAGAAGTACC
GACTGGTTTGAAAATCGTTCTAAACACAGATTTGAATATTGGCAAAATTG
ATGATGTTTTACATGAGATATATAAGGAGCAAAAATTGATGTATGGAATG
ATTTTTTCTTTGAAATCTTTCGTCACAAGAATGTCTCCTATGGATACATG
ACAATCTACAACCTCTACATCTTTGATAGAAATGGAATTTGCCTATATTA
TCATGACTGGCAGCGAAAAAAATCTTCAAATTTACCCAGAGATGAGATTT
ATGTTGACTACGTCGTAAAGAATCCATTAACTGAAATGGGCGAACCAATC
GAAAGTGATCTTTTTGTCAGCAAGCTGAATAATTATGTGCAGAATCAATC
AATTTATTTCTAATAAGGATGCATTTGGTAGCTACCGAACAAGTACATAC
AAACTGAATTATTTAGAAGTACCGACTGGTTTGAAAATCGTTCTAAACAC
AGATTTGAATATTGGCAAAATTGATGATGTTTTACATGAGATATATAAGG
AGCAAAAATTGATGTATGGAATGATTTTTTCTTTGAAATCTTTCGTCACA
AGAATGTCTCCTATGGATACATGACAATCTACAACCTCTACATCTTTGAT
AGAAATGGAATTTGCCTATATTATCATGACTGGCAGCGAAAAAAATCTTC
AAATTTACCCAGAGATGAGATTTATGTTGACTACGTCGTAAAGAATCCAT
TAACTGAAATGGGCGAACCAATCGAAAGTGATCTTTTTGTCAGCAAGCTG
AATAATTATGTGCAGAATCAATCAATTTATTTCTAATAAGGATGCATTTG
GTAGCTACCGAACAAGTACATACAAACTGAATTATTTAGAAGTACCGACT
GGTTTGAAAATCGTTCTAAACACAGATTTGAATATTGGCAAAATTGATGA
TGTTTTACATGAGATATATAAGGAGCAAAAATTGATGTATGGAATGATTT
TTTCTTTGAAATCTTTCGTCACAAGAATGTCTCCTATGGATACATGACAA
TCTACAACCTCTACATCTTTGATAGAAATGGAATTTGCCTATATTATCAT
GACTGGCAGCGAAAAAAATCTTCAAATTTACCCAGAGATGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004390XLOC_004390Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007743-exon-sc0000079-1575043694:626705..627051TCONS_00007743-exon-sc0000079-1575043694:626705..627051Clytia hemisphaericaexon
TCONS_00007743-exon-sc0000079-1575043694:623515..623585TCONS_00007743-exon-sc0000079-1575043694:623515..623585Clytia hemisphaericaexon
TCONS_00007743-exon-sc0000079-1575043694:622767..622902TCONS_00007743-exon-sc0000079-1575043694:622767..622902Clytia hemisphaericaexon
TCONS_00007743-exon-sc0000079-1575043694:619963..621393TCONS_00007743-exon-sc0000079-1575043694:619963..621393Clytia hemisphaericaexon
TCONS_00007743-exon-sc0000079-1510915933:626705..627051TCONS_00007743-exon-sc0000079-1510915933:626705..627051Clytia hemisphaericaexon
TCONS_00007743-exon-sc0000079-1510915933:623515..623585TCONS_00007743-exon-sc0000079-1510915933:623515..623585Clytia hemisphaericaexon
TCONS_00007743-exon-sc0000079-1510915933:622767..622902TCONS_00007743-exon-sc0000079-1510915933:622767..622902Clytia hemisphaericaexon
TCONS_00007743-exon-sc0000079-1510915933:619963..621393TCONS_00007743-exon-sc0000079-1510915933:619963..621393Clytia hemisphaericaexon
TCONS_00007743-exon-sc0000079-1491911889:626705..627051TCONS_00007743-exon-sc0000079-1491911889:626705..627051Clytia hemisphaericaexon
TCONS_00007743-exon-sc0000079-1491911889:623515..623585TCONS_00007743-exon-sc0000079-1491911889:623515..623585Clytia hemisphaericaexon
TCONS_00007743-exon-sc0000079-1491911889:622767..622902TCONS_00007743-exon-sc0000079-1491911889:622767..622902Clytia hemisphaericaexon
TCONS_00007743-exon-sc0000079-1491911889:619963..621393TCONS_00007743-exon-sc0000079-1491911889:619963..621393Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007743-proteinTCONS_00007743-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000079supercontigsc0000079:619963..627051 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
23.6188	23.605	13.192	13.0747	44.0709	31.1096	39.5294	42.1312	26.6577	20.4654	17.558	19.5878	14.0848	13.1421	13.6576	13.8621	18.8813	18.1161	12.2417	13.2714	25.8844	23.1063	23.6502	26.3849	17.2156	22.1613	22.2917	16.6498	17.4058	17.5448
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR007233TRAPPC
IPR011012Longin-like_dom
Vocabulary: Cellular Component
TermDefinition
GO:0030008TRAPP complex
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
cellular_component GO:0030008 TRAPP complex
Blast
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BLAST of TCONS_00007743 vs. Swiss-Prot (Human)
Match: TPPC1 (Trafficking protein particle complex subunit 1 OS=Homo sapiens GN=TRAPPC1 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 7.243e-54
Identity = 78/136 (57.35%), Postives = 114/136 (83.82%), Query Frame = 3 
Query:  249 MTIYNLYIFDRNGICLYYHDWQRKKSSNLPRDEEQKLMYGMIFSLKSFVTRMSPMDTKDAFGSYRTSTYKLNYLEVPTGLKIVLNTDLNIGKIDDVLHEIY-KIYVDYVVKNPLTEMGEPIESDLFVSKLNNYVQN 653
            MT++NLY+FDRNG+CL+Y +W RKK + +P++EE KLMYGM+FS++SFV++MSP+D KD F +++TS YKL+Y E PTG+K+V+NTDL +G I DVLH IY  +YV+ VVKNPL  +G+ ++S+LF S+L++YV++
Sbjct:    1 MTVHNLYLFDRNGVCLHYSEWHRKKQAGIPKEEEYKLMYGMLFSIRSFVSKMSPLDMKDGFLAFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHIYSALYVELVVKNPLCPLGQTVQSELFRSRLDSYVRS 136
The following BLAST results are available for this feature:
BLAST of TCONS_00007743 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TPPC17.243e-5457.35Trafficking protein particle complex subunit 1 OS=... [more]
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