TCONS_00007753 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007753
Unique NameTCONS_00007753
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length781

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007753 ID=TCONS_00007753|Name=TCONS_00007753|organism=Clytia hemisphaerica|type=transcript|length=781bp
cgcccctaaagtAAAAGCCTAGTATTAATAGGGTTAAGAAGCACACaaat
taccgtgaaaagcatAGGCCAGAATCATATTCTGACCTGTGCCGACGAAT
CCCGATTCCATTCAGTGTGCAATCAACGTATTGATAAGAAAACTAACCAT
GATGACAATCCATTTCTTTTCTCTGTCCGGTATTTCggtcttttgaaaaa
aaagtacgGTATTCTGGTATTTGAAATGCTGCCGGTGACGGTAAATTGCC
CATAAAAagcttcggtatttcggtatctACTCGTAAaacttcggtatttc
ggtaactttaaaatctttccgAACTGTATGTTTTCTTCGACTTCATAAAG
AGAATTCCAAAAATAAactttcttaaattttagaaaactaCACCCATGTT
TTCTAAAACGATCAGTTTTGACACAGTATGTATATGTCACTTTAGCTCCC
AAACAGCAGCGTGGTGACGTGGTCAGAAACAACTTCACCCCTAGTCAGTC
TAGTGGCAAGTTTTTTGTGGTTATAGTCCATTCCTTTAAATAATGACTTT
TTACAAAAGAGTGCTACCTTCtcttaccgtgagtatcacagcgcaaataa
atattttctctttgaaaactctGATATACTCAGGGTAACCTTCTCTCACT
TGCaaatgtcttttttctttaagcaAATGGATGGACTAAACCAATCTGGA
GTCCCTTTCCCTAATTTTATATCACAAAACACACTTTTACTTTAGCCATA
ATAGCGGACCTGTAAATTAGCAAAAgttttt
Run BLAST on NCBI

transcript from alignment at sc0000079:234650..235430

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007753 ID=TCONS_00007753|Name=TCONS_00007753|organism=Clytia hemisphaerica|type=transcript|length=781bp|location=Sequence derived from alignment at sc0000079:234650..235430 (Clytia hemisphaerica)
aaaaacTTTTGCTAATTTACAGGTCCGCTATTATGGCTAAAGTAAAAGTG
TGTTTTGTGATATAAAATTAGGGAAAGGGACTCCAGATTGGTTTAGTCCA
TCCATTtgcttaaagaaaaaagacatttGCAAGTGAGAGAAGGTTACCCT
GAGTATATCagagttttcaaagagaaaatatttatttgcgctgtgatact
cacggtaagaGAAGGTAGCACTCTTTTGTAAAAAGTCATTATTTAAAGGA
ATGGACTATAACCACAAAAAACTTGCCACTAGACTGACTAGGGGTGAAGT
TGTTTCTGACCACGTCACCACGCTGCTGTTTGGGAGCTAAAGTGACATAT
ACATACTGTGTCAAAACTGATCGTTTTAGAAAACATGGGTGtagttttct
aaaatttaagaaagtTTATTTTTGGAATTCTCTTTATGAAGTCGAAGAAA
ACATACAGTTcggaaagattttaaagttaccgaaataccgaagttTTACG
AGTagataccgaaataccgaagctTTTTATGGGCAATTTACCGTCACCGG
CAGCATTTCAAATACCAGAATACcgtacttttttttcaaaagaccGAAAT
ACCGGACAGAGAAAAGAAATGGATTGTCATCATGGTTAGTTTTCTTATCA
ATACGTTGATTGCACACTGAATGGAATCGGGATTCGTCGGCACAGGTCAG
AATATGATTCTGGCCTatgcttttcacggtaatttGTGTGCTTCTTAACC
CTATTAATACTAGGCTTTTactttaggggcg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004400XLOC_004400Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007753-exon-sc0000079-1491911889:234650..235430TCONS_00007753-exon-sc0000079-1491911889:234650..235430Clytia hemisphaericaexon
TCONS_00007753-exon-sc0000079-1510915933:234650..235430TCONS_00007753-exon-sc0000079-1510915933:234650..235430Clytia hemisphaericaexon
TCONS_00007753-exon-sc0000079-1575043694:234650..235430TCONS_00007753-exon-sc0000079-1575043694:234650..235430Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000079supercontigsc0000079:234650..235430 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.124048	0.18145	0.140454	0.549648	0.334571	0.132191	0.318967	0.298613	0.156799	0	0	0.123923	0.330002	0.0428388	0	0.26457	0.0465612	0.190895	0.131866	0.206982	0.239873	0.351006	0.142231	0.0646543	0.89787	0.416025	0.0850472	0.272294	0	0.210417
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007753 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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