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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007783 ID=TCONS_00007783|Name=TCONS_00007783|organism=Clytia hemisphaerica|type=transcript|length=807bp
CTGCAAAATCATCAGGACTTGTGACATGTATTTCACATTGAAGCTCTTAT
CTAATCTACACCTAGAAAGTCActgtcaaattttctttcaaaataactgc
ttttcattcaaattttcatttgattttaccACTAGGTATAATAAATAAGA
AATGATGGATGTTCACTTTTCAGAGCTTTTAAGAATGGAATGAAAAGCTT
ACGtttattagattttgaaaaatatcatgaTGGATGAGgCTAAAGCTTTT
GAAAGCTTGAAGCAAGATCTTGTTGATAAATCACAACAATTGAAAAACTT
GCGAATGGAAATTGCATGCAACAGCCAGGCAAGAAACTCATTTTTAGAGT
TCTTAAAAACTAGACATTGTAGTTTGAGGTAGATCAATTTATAAATGGAA
CTTGCATTCTTTAGTAAAGCTGGGCTATGAATGCATGATAAAAGTTTCTC
CTAAAGCCTGTCTCAATATAGTTTGCAAGGAAAACGATGGCAgtttttat
aacttttaatTGCCCAATtcgatttcaaaatttccttttttttgttttag
ataaTCAAAAGCACATTCAAATgtaattttctttgtaaaagCTACTAATC
TTTGCAACAAAATTTGTGAAAGATGAACCTTTAATTTCTTCTGAGCTTGT
TTGAGCTGTTGCCACTGCTTTCAGTGCAAGTCAACTACTTTTATAAATTA
TTGGGCCTCATGTTATCCTAACACCTAAGGAATGATTTTTTTGTATGAAA
CTTGTCAATGGTTATGTTGTGTTCATGCCCAAAACTATGCCTGGAAACTG
GAAACCA Run BLAST on NCBI transcript from alignment at sc0000080:12421..13362+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007783 ID=TCONS_00007783|Name=TCONS_00007783|organism=Clytia hemisphaerica|type=transcript|length=942bp|location=Sequence derived from alignment at sc0000080:12421..13362+ (Clytia hemisphaerica)
CTGCAAAATCATCAGGACTTGTGACATGTATTTCACATTGAAGCTCTTAT
CTAATCTACACCTAGAAAGTCActgtcaaattttctttcaaaataactgc
ttttcattcaaattttcatttgattttaccACTAGGTATAATAAATAAGA
AATGATGGATGTTCACTTTTCAGAGCTTTTAAGAATGGAATGAAAAGCTT
ACGtttattagattttgaaaaatatcatgaTGGATGAGGTATTGCCTTTC
TTAATTCTTTTGTAACAAACACTTTCCATTGTATGAAATCTTACTTCAAC
ATGATTTTTATTTATAGGGATTTGATTGTTGTTATAATAGATAAAGCttc
ttgtttaattttacattttataggCTAAAGCTTTTGAAAGCTTGAAGCAA
GATCTTGTTGATAAATCACAACAATTGAAAAACTTGCGAATGGAAATTGC
ATGCAACAGCCAGGCAAGAAACTCATTTTTAGAGTTCTTAAAAACTAGAC
ATTGTAGTTTGAGGTAGATCAATTTATAAATGGAACTTGCATTCTTTAGT
AAAGCTGGGCTATGAATGCATGATAAAAGTTTCTCCTAAAGCCTGTCTCA
ATATAGTTTGCAAGGAAAACGATGGCAgtttttataacttttaatTGCCC
AATtcgatttcaaaatttccttttttttgttttagataaTCAAAAGCACA
TTCAAATgtaattttctttgtaaaagCTACTAATCTTTGCAACAAAATTT
GTGAAAGATGAACCTTTAATTTCTTCTGAGCTTGTTTGAGCTGTTGCCAC
TGCTTTCAGTGCAAGTCAACTACTTTTATAAATTATTGGGCCTCATGTTA
TCCTAACACCTAAGGAATGATTTTTTTGTATGAAACTTGTCAATGGTTAT
GTTGTGTTCATGCCCAAAACTATGCCTGGAAACTGGAAACCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007783-exon-sc0000080-1491911889:12421..12658 | TCONS_00007783-exon-sc0000080-1491911889:12421..12658 | Clytia hemisphaerica | exon |
| TCONS_00007783-exon-sc0000080-1510915933:12421..12658 | TCONS_00007783-exon-sc0000080-1510915933:12421..12658 | Clytia hemisphaerica | exon |
| TCONS_00007783-exon-sc0000080-1575043694:12421..12658 | TCONS_00007783-exon-sc0000080-1575043694:12421..12658 | Clytia hemisphaerica | exon |
| TCONS_00007783-exon-sc0000080-1491911889:12794..13362 | TCONS_00007783-exon-sc0000080-1491911889:12794..13362 | Clytia hemisphaerica | exon |
| TCONS_00007783-exon-sc0000080-1510915933:12794..13362 | TCONS_00007783-exon-sc0000080-1510915933:12794..13362 | Clytia hemisphaerica | exon |
| TCONS_00007783-exon-sc0000080-1575043694:12794..13362 | TCONS_00007783-exon-sc0000080-1575043694:12794..13362 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080 | supercontig | sc0000080:12421..13362 + |
Blast
The following BLAST results are available for this feature:
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