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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007803 ID=TCONS_00007803|Name=TCONS_00007803|organism=Clytia hemisphaerica|type=transcript|length=400bp
CAGACGCTGCAATTATGGGAAAGGGTTTTAGGATTTGATTCCTTACGTCT
TTTAGCAGTTTTAGCAGTAGCGATCATTTCATACCGGAGGGAAAATCTCC
TGGGTGTCACAACAAAAGCAAGTGCGGAGGCGGTGCTAGCTGATATTAGT
ACGATCAAAGTCATTCCTGTCTTGGTACAATATTTATCAAATTCTTAATC
TCCTGGAATTCGTGACGTAGTATTCTTAACAATGTCACCTGTCAAATGCT
ACATTTGCCTCCAGATATGACTTGGGGTTTAACAGTTTTCGACTTATCAT
TTTTGCATTATAATAATTGTAGatatttattaaaacaaaaCCATATTTGA
CAGATCTTGAAATAATAAAAACGAAAGAAATAACACTTGTTGCAAAAATA Run BLAST on NCBI transcript from alignment at sc0000080:36719..37962+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007803 ID=TCONS_00007803|Name=TCONS_00007803|organism=Clytia hemisphaerica|type=transcript|length=1244bp|location=Sequence derived from alignment at sc0000080:36719..37962+ (Clytia hemisphaerica)
CAGACGCTGCAATTATGGGAAAGGGTTTTAGGATTTGATTCCTTACGTCT
TTTAGCAGGTATGTGCGTAACTTTCAGCTTTCAagtaatttgttttattt
gtcGATGTTATTAGAGGTTTCTTTCATGAATGTATGAGTATTCTGAGAAA
TCATATGACAACGCAAAGTTAgaccaaaaagttttttattaccTTTGTAA
CGTTAACATTTCGTTGAATTCGCCTAGCTAGTTTAACATTCATGTTCATC
TAGTAACTACTACTATGCCCCTACCGCACCAGTGGTGAAAAAGGGAAGTA
GAAGAACATAGGTTTTCACGATTCGAAGATGGTTCTAACCCTTTCTTCAT
CTTTCAGTTTTAGCAGTAGCGATCATTTCATACCGGAGGGAAAATCTCCT
GGGTGTCACAACAAAAGCAAGTGCGGAGGTAATGTTCATTTTTCTACCTT
CTTAAAAACGTCACCTCCCTCCATTTACACCCTCTAAGAAGAGGACGTCT
TATTCCCCTTTTATGGTTTGACCTtataggttttatttttacataagtgt
tcccgtttcatatcagacaccgTTTCATagcagacacatatttcatatta
gaACAGTGTCTGCATATTGTTAAATAATGCTGATATTATAAGcaaaagaa
tgtttttcttttcttgctccacatccgcgtcgatccaatgtgaaaaagct
tgtgaattaaaattcatgagtaagcaaacgatatcactcgtatttgaaaa
caaaacctttaaagttgtGGGTTGTAATTGTCATTATCCCCCACGAAAGT
TTTCATTTCTCCTTGAAAAAAGCAAAGGACACCAACCCACAAAAACGGAT
ACGTTCTTCTTTTTGTTGTTCTTGTCGTTTCATTCTTCTTATTCTTCCTT
CCCTCTGCTTATTGAAGACATGAGTGTAAACAGTTTTTACTAACTCTTTc
atatttcatgtttttctttctAGGCGGTGCTAGCTGATATTAGTACGATC
AAAGTCATTCCTGTCTTGGTACAATATTTATCAAATTCTTAATCTCCTGG
AATTCGTGACGTAGTATTCTTAACAATGTCACCTGTCAAATGCTACATTT
GCCTCCAGATATGACTTGGGGTTTAACAGTTTTCGACTTATCATTTTTGC
ATTATAATAATTGTAGatatttattaaaacaaaaCCATATTTGACAGATC
TTGAAATAATAAAAACGAAAGAAATAACACTTGTTGCAAAAATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007803-exon-sc0000080-1491911889:36719..36776 | TCONS_00007803-exon-sc0000080-1491911889:36719..36776 | Clytia hemisphaerica | exon |
| TCONS_00007803-exon-sc0000080-1510915933:36719..36776 | TCONS_00007803-exon-sc0000080-1510915933:36719..36776 | Clytia hemisphaerica | exon |
| TCONS_00007803-exon-sc0000080-1575043694:36719..36776 | TCONS_00007803-exon-sc0000080-1575043694:36719..36776 | Clytia hemisphaerica | exon |
| TCONS_00007803-exon-sc0000080-1491911889:37076..37146 | TCONS_00007803-exon-sc0000080-1491911889:37076..37146 | Clytia hemisphaerica | exon |
| TCONS_00007803-exon-sc0000080-1510915933:37076..37146 | TCONS_00007803-exon-sc0000080-1510915933:37076..37146 | Clytia hemisphaerica | exon |
| TCONS_00007803-exon-sc0000080-1575043694:37076..37146 | TCONS_00007803-exon-sc0000080-1575043694:37076..37146 | Clytia hemisphaerica | exon |
| TCONS_00007803-exon-sc0000080-1491911889:37692..37962 | TCONS_00007803-exon-sc0000080-1491911889:37692..37962 | Clytia hemisphaerica | exon |
| TCONS_00007803-exon-sc0000080-1510915933:37692..37962 | TCONS_00007803-exon-sc0000080-1510915933:37692..37962 | Clytia hemisphaerica | exon |
| TCONS_00007803-exon-sc0000080-1575043694:37692..37962 | TCONS_00007803-exon-sc0000080-1575043694:37692..37962 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080 | supercontig | sc0000080:36719..37962 + |
Blast
The following BLAST results are available for this feature:
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