TCONS_00007938 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007938
Unique NameTCONS_00007938
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1480

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007938 ID=TCONS_00007938|Name=TCONS_00007938|organism=Clytia hemisphaerica|type=transcript|length=1480bp
gatgtttatttcatttttccaaaatcaatttttgttatCCTTGTTCGGTC
ATACTAAAACTTTTTATCagtaaatttttgatgtttttttttagtaagtg
aaaatactaTATATTGATTCAACCTTGCTGGAAAAAACCAACGTGCTGAA
GCTGAACATCATAACAAGAAGTGACGctagaaaaaccaaaacaacacCAA
AACATCTTCAACAACCCATCCTATCATCCACATCCTTGCATCCAAATTTT
GGACTCTTTCATCATGTCGAACACTTCCACAAAGAGTATCCCAGTGAGGA
GAGTCCAAATCCACGAAGCCCATCAGATGCCTTCACGCTATTCCGAAACA
CCAGGAGGAACGATTTTTTCAACTACCCCTGGAGGTACCAGAATTATTTA
CGAGCGCAAGTTTTTGCTAGATTTGAAGAGCTCGCCACTTTCTCAAACAC
CAACGAAGTTACCTGTCATTCCTGGCGTCACTTTGGATGACAACGGCAAG
ATAATTGAAGAGGATGAGAGTGACTTGCAAACACTTGCTGAAGAAACAAA
ACCTCCTCAAGTTcctaaagaggaaaagaaaCCTACCGATGACGATATGT
TCGAGATGGAGATGTAATATGTCAGAATTCCTCTCGCCTTGAATATGCTC
GTTGCTGGTACCGAATTGTAAAGAATACtccaaaaaaaagaataaaatgt
tccaaaaaagaaaaaaaggtttgTAATGAACAAtcaatcaaaagaaaaga
aaagccaaaaaaaatcaaatctatcTTTAGCCATAAATGTTGTGTTCAGT
TCTCGTCGAtgatcattttttttattttaccgacaTGGTGCTGGCTGGAA
CAAAAACCTCCTCGATTGAGGTGCTGTCGAATCCCTGATCTCTGTTTTTT
GTTCTATGTATCTAGTTTGTTTGtagtttttcatttgtaaataGTATTCC
AGTAGCTTTGTCTTTGTCCTTCCTTCTCGAGAAGCTTATCTTTAAAAGCC
TTTATTTTGTACTATATTTTATTGGAAGAGAATTTTTATTAGAGTCTTAC
TTTTATTTTGTGAGGCATTTTCGTCAATTTTGTCAAGTAAATGCTTTGAT
TTAAGAGTGATTGCTGGCGAAAATTTCTCACATATTTTTTCAGATTGTTG
TCATTATTTTATTGCTGGTGTTTTCTGGAGGTTGGGATtcaagaaaattc
ttttttatcaaGGTGCTGTTTATGTACCGACTTTTAAACTCTTAGTGAAA
TAAACTAGTGGAAGAGTTGAACCTCCTTTGCTCTTCAACCTAGTTTCACT
TCTGTAAATAACTTCAAAAGTGtcgaattttattatttgaccATCCATTA
TATAGCATTTATTAACGAAAAGCTATCTTGTAACATACTGTTGAacgcaa
aaagaaaattttttaaatcgggAAGATTCATCTTGCCTTCCGAATTCGAT
TCCCACTCTGGTACCACGGCTCAATAGACA
Run BLAST on NCBI

transcript from alignment at sc0000080:580895..591821-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007938 ID=TCONS_00007938|Name=TCONS_00007938|organism=Clytia hemisphaerica|type=transcript|length=10927bp|location=Sequence derived from alignment at sc0000080:580895..591821- (Clytia hemisphaerica)
GATGTTTATTTCATTTTTCCAAAATCAATTTTTGTTATCCTTGTTCGGTC ATACTAAAACTTTTTATCAGTAAATTTTTGATGTTTTTTTTTAGTAAGTG AAAATACTATATATTGATTCAACCTTGCTGGAAAAAACCAACGTGCTGAA GCTGAACATCATAACAAGAAGTGACGCTAGAAAAACCAAAACAACACCAA AACATCTTCAACAACCCATCCTATCATCCACATCCTTGCATCCAAATTTT GGACTCTTTCATCATGTCGAACACTTCCACAAAGAGTATCCCAGTGAGGA GAGTCCAAATCCACGAAGCCCATCAGATGCCTTCACGCTATTCCGAAACA CCAGGAGGAACGATTTTTTCAACTACCCCTGGAGGTAAAACTTGTACATA CTTTTAACTTGCTTCTTCTCTGTTTAAAATATAGTTCCGTTTCGTTAGAT TACCTTAGGATGATTCTTTTTGATCGGCTAATCAATTGACTCTTGGTGAA TATCTATTTTGTTGTTTGGTTGTTTGGAGACCAATCCAATGTGGCCATGA CACTTTCAATAAGTTCCCATATATATGGGAACACCATGCCCATGTTGTTA GCACCTTTGACTGACTGCATTATTCCCCTCAAATGGATAGGAAGCCAAGG AAGATACCTTCTTTATTCCTTCAAGTGAACTGCTGCAAGTTAGCTCGGTG CGGTAAAATGCATAGTTCAATAAAACGCTGGTTTTTCGTAACACAACAGA GGGGGTGTGCTGGGACCATTCTACGTCATGCTTCTAATTGAAGGAAAACC AACCAATACACCGTTTAGGAGTGTCGACTGCGCACGCGTCAATCCAATTT TCCATTGTTTTGATTTTAGCGATCACGGAAAATTCACTCTCCTCCGTAAA AAAACGGTAGGTAAACATTTGGTTCTCATAAGGAAACATAGTAGAAAAAT GGTAGGTAAAGAACTCCTTTTAATCATAACTTCTTTTCCTCTTGATGAAT TTTTGTGAAATTTTCAGAAGAGACTTATAAAATTATCAATGATATCATGT TCAAATATCTAAATCATTCTCTTTAAAGGAGAGACAAAAATTCACAATGT TTACATTCCTCTAACCTTTCACAGTACTAAAGTGCGCATTTTTACCTACC ATTTTTACCGGGCCTCTGCAATGGAGTACCGTGAAATGGCGAGACTCCTA AACGGTATATTTCTTCAAGTAAAGTCATCTGGAATTAAAATTAGACAAAT TTCATCTTGCATTGTCCAACAAGAGGGTTATTCCAAAAATATTTAAAGAA TGATACAAAAATCTTTCACCAATCCCTCAGAAATTAGGGTTAGAACAACT ATCGATGCCATCTTACGAGGAAAGAATCACCTGGAAAATATGAAACATGG TTAGGTTAAGTATATCTCAATAATTTAAAACCTTGCCAAAAGGTGGCTAA TTTCTAAAACTGCTGTTAGAAAATATTCAAATAAAAAATGGTACATTGGC ATTGTTAGGGGGTTAAAGGGGATGTTGTTTATTGGCAATGCATTTGGGTT AAAAAGTTGATGGGCTAATGGTGTAACAAAGCTTAAAGTTTGTAATGTTC GGTTCCTTTTGTTGAATTGAATTGAATCAATGCTGATTATGCTTTGTTTG AGACAATATTATGACTTTACTGACAAATAATAGGGCAAACTGGCTAATAT TGTAACATGTTACTTCTTTCTTTAGCCAATATCTTTGGTTTAACTATGTG CAGTTTCCGGAAATAACAACGGTGGGTAGTTAACCCCTTAAAGTCTCATT TCCAAACCAAAAAGTTACGCAAACCAAAATAATTTTGTTTCTGGTCCACT GGGTGACAATAAAAACACTCACCTGGCCAGCTGGGAAAAGTTTTTTGCTG AATTTCGATTCCAAAACTCAATTTTTTAAAGCACAAAACTGCAGTAATTT GACACCGCTAATATAAATATAAATTTTTTAAGGAGAACTCAATAACAAAA GTCTTTCAAAACGACGATGTCATGTAGAAAGGTGATTGAAGGAAACGAAT TAGTTTCAGTGATGGCTAAGGCCACATATAAATATATTGTTTGTAATACA TTATCTAAATGAAAAGAAATAAGAATATAGACTAATCTGAACATCTCCCC TTCCCAGAGAGGTCATGGTCACTGTAGATAGTGTTCCGTTTCTTTTTATA TATACAGTTCAATGTTTCTTTCCCCTAATGGCAGGGAGCAAGTGGTTGTT GTTCCAAGAGGCCAGGCGCGTTATGAGATGCTAATCGTCGTCGGATATTT GATGACGATCTGGTAACTGTTGCTTGTGTTGGCTGTGCTGGCTGAGGCTG AGTGGCCTAGGAACTGTTGGATGAGGAATAGTTGGAGAAGTGGTCTCTAA TGGTGAGGATGGAAGCAGATTGGTAGGTGTGGGTAGTGCTGTTGGTGATA CAAATGTTGCTGGTGGAAGGAAGCAACGATTTTGCAGCCGGTTGTCTTGC GTCGATCACCCATGATGAGTGAAGCTGGTAGTGGGATGGGTGTGTGGGTA TGTGGTCATGCAGCTGGCGGTGAAATAGGATTTGGGCAGGACTGAGTTTG AGATCTGGTAGAGGAGTATTTCTGTATTGTAAGATTGCTCAAGAAACCTT GTTGTTGTCGATTGTGCCATTTGGTGATACGTTATCGAGTCCCCGTTAGA CTGGGGGTACTCTGCTGATGGTAGACGGTGTTTGACTTTCCAATCTGATA AGAATTGTTGGAACTTGTTTGCGGTTAACTGAGGTCCTCCATCTGAACTG AATTCTTCTGGAACGCTTAGATAGTGAAGAGGGTGCAACAAGTGGATATC AGGGTGTCACTGGTGGCTTCATTGGGTCTAAAATGATACAGGCAGTTCCA GCCGCTATATTTATCAATGATCGTCAAATAGTTTTGACTTGCAATAATGA AATAATCACAGGTGATCATTTGGAATTGATATTGCGGTGGAGGGCTTTGG ATGATCGGTTCCTTGGGCTGACTAGTGACTGATACAAGTTTTACAGCAGT CACAGATTTGGTGGATATCTTTGTTGATTCCCGGCCAATAGATACAATTG TTCTCTTGAGCCTGCATGTCTGTGCAGCCTTGATGGGCAGAATGAAGGGC TTGAAGGATCTGATGATGGAGGTTATTGGGTATTACGAGGCGTTTGTCTA ACATTATGAGGCCATTCCAATGCGATATATGATTTCTAACTTCCCAGAAT GGTTGTAGATTGATGCAACACTCTCATGGTCTCCTTGTATGAATCGATGG AAGCTATGTGGACGCATCCATTTTCCAGGGCATTACTGGATGGTGAATCT GAGGGAATGGCTCTTTAGCTTTTGAATGCAAGGATTCTTTACTGAGCTGA GGTCCCGATTGTTGAAAATACCCAGCAATGGTTCATGGTCTGTCGTGATG ATCAGGTTGTTGCACCAGGCAACGGCAAGTGCTTCTCCTTCTGTTGAGCT GTACTGGCTCTTGGAGTCGGATGTGAATGTTGAGCCTGCATAGATGAGCT TCCATTCATCTGGACAGCATACAGGTGCATTCTTTGTGTCACATTTACAA TGCTGTTGTAGTAGTAAATACCCATATCCGTCCTTGCTCCAATCAGTTTG TAAACAAGTTGTGCGCTTATAGTTGAACGAACAATTACCTTTTTAAAGGG GGGGGGGAACCAATTTTCCAATTTTGGATGGGTGATGGGGGAAAATGAAA ATTTGAATAGTAAAGGGGGAAAAAAGAGGGGGTAAAATATCGATAGTTGG CAAATTTGGTGGGGGAAGTTGTTTTGATTTTATTTAGGATTTTAATTTTT CATTTCATTGTTGTTTTAAGTCTGCTTTTCTAAGCATGTTTCTTTACATT AACCCATTTTCGTTCTATTTTGTCTGGTTTTCCTTTTGCAGCAAAATTTT ACGTTTGTGCCAGGTTGAAATTTGAGAAATTTATATGGGTATATGGGGGG AACTGATATTTTCCGAATTTTCTGGGGGAAAGCAAAAAAGAGGGGGGAAA CAAAAAGCTGAAAAGTCATAGGGGGGAAAAAAAGAGGGGGAGATTTAAAA AAATCAAGAATTTGGTGGGGGGGACATACCCTGGAGGACACTATGAAGGA CACTATGAACCCAAGTCGTGAGATGTTGGCTCTCCTCGTCAATTGGTACA GAAAGGTATCCGTCAACTGCATCCAAAACAGTCTTCTTGGTATTGGGAGG TACTTGACATGCAAGTTGGAACGGGGAGGGACAATGGTGAGTTTTGCGAT TACACTGTATGTTGAGTTGTTGGAGGTCAACTGTTCGTCTAATATTGCCG TTTTTCTTTCTGGCTGTGACCATGGTGGTGCACCACTCAACTGGTGTTCC GATTGGTACAGGTGCTATAATGCCTCTCTTGACGTCGTCGTCCAGACTCT TCTTGACTGCTCCCTTAAGGTGGAAAGGCACTGGGATGGGGTTATGACAA ACATGTGGCTTTGCATTAGGTTGAATACGTGGGCGGGTTTTGTATCCATG GATGGAAATGGTCAATCTCTGTTGAACATAGTTTTGGAAAATTGTTCTAA TAGATAATGTTTGAGTTTCGGAACGTTTTCCCCTGTAGGTTCAAATGGTA ATTTTTCTGGACGTTGAGGTAGATTACTTGGCAGGGTGTCAACCGAGGAA ACGGTTGTTGACATGGGATATGGAAATGTCTCTGGTAAAATGTTCATTTC TGTACACCCTTTACGGCTGACATAAATTCTGTCAACTTTTTCACAAATGT ATAGCGTTGAGTAGTAGTGTGATTGTCTATTGTGAAAGTCATTGGTAGCC AGCCAGAACAATGTAATGTGGATTCGCCAACGGCTCGAACTAGTTTATTG TATGGGATCAACGATTGTTTGTTTAGTTTGAGTTTATTCAAATGTTGCGG TCCAGCTAAACAAATGCTAGCTCCACTATCAGGAAAGATTTTCATTGACG TTGGTGTCGGTTTGGTCGTATTGGAGGTTGGAGTAAGTTTCGCATTTATT TCAGTGATCTCTGCAGTTGGACGGAACGCTTTGCTTTTTTCGTCATAGGT GACATGGGCCAATAGTGCTTCGGCTGTTTCTGATTTTGGTTTCTGACACA CTTTCGAAAAATGATTTGATAATTTGCAATTGTGACATGTCTTCCCCATG CTGGACACATGGATGACCGTTCTTTTGATCCGTGGGTAAGGCTGCCACAA CCAGAACACGGAGCTTGTCTGGTTGGAAGCTTTTGGCAATGATATTGCGA TGTTCGGACCGCCATTGCATCGGATGCATCTTGTAAGCTGTCATGATCTT GGAGGGCCGTTTCGTAGGCTTCTGCATGCTTGACGACATCTTCCTTACTG TTGAGGGTGGTGGCCTTAGCAAGGATGTCGACCTGTAGAACTTCGTTATG TAAGCCCCGGATCAGTTGGTCTCTGATGTACGAAGGTGAGAGATCATAAT GACATTGCAGGCACGAAAATTTGCAGTCTTGGGCTGATGACTTTAAACGA ACTAGATAGTCCCTTAGTTGTTCATTTTTGTGCTGCGATAGTGGTGAAAA TTGCATTCTGTGGACGGTTGGATTCAACTTTTTCGTAACAATGGTTTCAA TGGCATTCAGGCAGTCGTTCTCATTGAATGTTAGAAAGTTTGGATGGTTG TTGATGGTACTTGTTTGGGTAGCATCGTCACATGCGTTGTAAATCATTGA TGCAATCTGGTTTGCTGAGATCCCTGCGATTTGTTTGTAAACAGCCCAAT CGATTGTGAATTTATGAAACTGCGGATGGGTCATGTCAGACGTAATGGAA GGTAGTTTTGCAGATTTATGTGAGGCGGTTGGTACGACAGAAGGAGTTGG ATTAGTTGTAGCATACGTAGTCGAGTCTGGGGTACTGATACTACAGATGT GGTGGAGAATCTTCATTATATCCCCAATAACTGTAATGCCCAGGTCTCTA GGGCAATATCTCTAATGTCATTCGATTCTCTGTGAAGCTCTTTGTATACT GGTGTGCAGCTTCTTCTGGGATTCCAGCATCCCGCAGGTATTTTTCCCAG TCTTGATCTGACTGTGACAGCGCCATGTAGAAAGGTGATTGAAGGAAACG AATAAGTTTCAATGATGGCTAAGGCCACATCTGAATATATTGTTTGTAAT ACATTAGATCTAAACTAGCCGGTACCCGGCGTCGCACGCCGGTTTAGCTG TTTGCTGAACGCATTTAAAGTCCTTTGGATGTTGGGAAGGTGGCTTAAAC ACGATGAAATCAAAATTAAAGAGAAGAATTCTCTTCAAAGTTTAACTCTA TCCCTCCCGGGTGACGTATCTTTTAACCATATTTTGAAAAAGATTTTTGT GGCAAAAATTATCAGAAAGCAGAAAAAGGGCGTCATTCCCAAATTACACC ATATCGGCGACCAGCGACGTCCGAGACGGCTCTGCAATACACGGGTTTCT AATTAAATCTGGCGCGAGAGAAAAAATCAAGTAAATAAAAGGAGCGATAA GGGGAAATGCCTTATAAAAGGTTGATAGATTTCCTTTCTTCTCTTTTGAA AGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNACGATTGACTTTTTATTTTAATGTTTTTTGTTTT CATAATGACCCATAAAGTCTGTCAAAATGGAAAAATGAGCTAAAATTGCT TGATACACGGCCAATTTTCGTGCAAATTTACATGGGATCAAAGCTAAAGC TAAGCAAAAATTTAATTCGAAACCCGTGTAATTAGATTTTTTTTCTCGCT TCGCTCGCGTTATATTTGCCGTAGTTCTTGATGTTTAGGAAAANNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNCGAAGAAAGAATTCTAGTTTTTACCGCCTTTTGAATGT ATTTTTAATGTTGCTGTTGTTCTAACAAACTTGTCTTGTGATTCTTGTGT TTTATTTTATAATTGTTCTTTTCTTTAACAGAGATTCTGTTTAAAAGATT TCTTTTGTTTTGAAAAGAATTCGAATGTCTTAAATCAAATAAGGTCGTTA ATTACATTCGAAAACATAAAACAAAAAAAAAATAAATAAAAAAAAGAAAA AGTCTATCAATCAAAACAAAGTCTTTATAAAACGGCGCGAATCTGATTTA ACACATTTGTGGAGCAAGAAGCAAAAGTCATCTTTTGAAAGAACAAAACA TTGCTTGCGAAAACGAAAGTGACACACAAAAAACAAACAAAATGACACAC AGACTACGGCTATTAATATATAGATGAAAAGAAAGAAGAATATAAACTGA TCTGAACATGTCAATCAAACAAGTTCGAATGAGAATCGCAATTGAATAAT AATCAAACATGATTGAATAACTGCAATTTGATTGTTGAACGCAAAAACGG CCAATCTGGGCCAATTCCAGGGTAGGATAACTTTCGATTGGTTTCAATTT ATTGTCAATTACATTCGATTGATTATGTTCGATTATGATTATTCTTGAAG TTAAGATTGATTGCAATTGAATTAAATTGACCCACTCCTTTAGATCTTGA GCGTGGATGGCTGCCCATACACCATCGAAAAATCGGATAAGAGCAAGTGC ATATAAGTACAGCACAAGAGCTATTAAAGAAAGTGAAAGCAATTAATTCA ATCAAACATAATCAAATATAATCAAATACAATTGAACGTAATCAAACGGC AAATTCTGGGTAATATTTGATTACATCAAATATTCTTCTTAACATCAAAG ATAGATTTGTTTGTGATTGATGCTGCAGAGTGCTCAATGAAATCAGAGCC AATTTAAATTTTAAAAGTTATCTTTCATCATAAACAAAGTAAATAGTACA CTACTCCATTTTATTTGTACNCATTCGATTGATTATGTTCGATCATGATT ATTCTTGAAGTTAAGTTTGATTGCAATTGAATTAAATTGACCCACTCCTT TAGATCTTGAGCGTGGATGGCTGCCCATACACCATCGAAAAATCGGAGCA AGTGCATAAGTACAGCACAAGAGCTATTAAAGAAAGTGAAAGCAATTAAT TCAATCAATTTGATTACATCAAATATTCTTCTTAACACCAAAGATATACT GCTAATCTTTTTGATAAATTTTTAATAAATTCAAAGTTCCTTCTGATGCT TGAGTCTAAACGACATAGGAAGGCTTAAGACATCCAAAAAATAGTCAGTT GTACACTGTGTTCCTGAATGAAGGGGAACAATGCGTTGATTTGCCTTGTA AATCTCATAATCTAAGTTTTGGTGTTCTGTAGGATTTAAAGTTTTTAATG TAATTTGAACATCAGAATCGGAGAAAGCAATGAATTTTGATATGACTTCA TGTATAAAACATCAAATTTGGTCAACTAGTTCCAAAATTACGAGGTTTTT AAGGCCGCTACAGCTCAGGCGCTTTGGTAGATTTTCAAGGCATGTTTTAT ACCTCGATTTTCATCAGCATTTCATGTTCTTTCCGCTGGAACCATCAGAT TTTGAATATTTTCAAAAAAATAATTTTTTGCCCTACCACCTGATGAAGTC ATCTGGCAGGTGGCCAGGTGGCAAAATTTGGTGTTAATATTTAAGATTAA GTTTTAGACCCTCTATGGATCATCTGTGCCAAGTTTCATGCTTTTATCAC CATCTGAAGTATTCTTACATTTTTATGTGCTAGCAGACCTCACTAGTCCA CCTCAGGCTCCCTTTGTTAATTATTTAATTATATTGTTTGTTTGTGCTCT TGATTCATATGAGATTTGTTCTGTAATGTTATATTGAGAACCCATGGTCG ATAGTCAACGCTTCCATAATTGCACTATCTTGAGAATTTCTGTAAGTTTG CTGTTATGCCTGCTTTCAATCCTTCTCGCCATTCTGGGACTTTTGATTAT GACATTCCTTTATTACTCATTTAGGTACCAGAATTATTTACGAGCGCAAG TTTTTGCTAGATTTGAAGAGCTCGCCACTTTCTCAAACACCAACGAAGTT ACCTGTCATTCCTGGCGTCACTTTGGATGACAACGGCAAGATAATTGAAG AGGATGAGAGTGACTTGCAAACACTTGCTGAAGAAACAAAACCTCCTCAA GTTCCTAAAGAGGAAAAGAAACCTACCGGTATGTATTCTCAGCTTTGAAA ACATTTTCAATGTTATTAAGTTTCAACCATTAACGTTCATAAAGAGTATC TGAGAAAACTTTTGCAAGAATGCAAGTTTGCAAGAATTTCAAATGTTTTT GTTCTTGCTAAAACTTTTTCAATTTCTTTATGCAGATGACGATATGTTCG AGATGGAGATGTAATATGTCAGAATTCCTCTCGCCTTGAATATGCTCGTT GCTGGTACCGAATTGTAAAGAATACTCCAAAAAAAAGAATAAAATGTTCC AAAAAAGAAAAAAAGGTTTGTAATGAACAATCAATCAAAAGAAAAGAAAA GCCAAAAAAAATCAAATCTATCTTTAGCCATAAATGTTGTGTTCAGTTCT CGTCGATGATCATTTTTTTTATTTTACCGACATGGTGCTGGCTGGAACAA AAACCTCCTCGATTGAGGTGCTGTCGAATCCCTGATCTCTGTTTTTTGTT CTATGTATCTAGTTTGTTTGTAGTTTTTCATTTGTAAATAGTATTCCAGT AGCTTTGTCTTTGTCCTTCCTTCTCGAGAAGCTTATCTTTAAAAGCCTTT ATTTTGTACTATATTTTATTGGAAGAGAATTTTTATTAGAGTCTTACTTT TATTTTGTGAGGCATTTTCGTCAATTTTGTCAAGTAAATGCTTTGATTTA AGAGTGATTGCTGGCGAAAATTTCTCACATATTTTTTCAGATTGTTGTCA TTATTTTATTGCTGGTGTTTTCTGGAGGTTGGGATTCAAGAAAATTCTTT TTTATCAAGGTGCTGTTTATGTACCGACTTTTAAACTCTTAGTGAAATAA ACTAGTGGAAGAGTTGAACCTCCTTTGCTCTTCAACCTAGTTTCACTTCT GTAAATAACTTCAAAAGTGTCGAATTTTATTATTTGACCATCCATTATAT AGCATTTATTAACGAAAAGCTATCTTGTAACATACTGTTGAACGCAAAAA GAAAATTTTTTAAATCGGGAAGATTCATCTTGCCTTCCGAATTCGATTCC CACTCTGGTACCACGGCTCAATAGACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004476XLOC_004476Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007938-exon-sc0000080-1575043694:591438..591821TCONS_00007938-exon-sc0000080-1575043694:591438..591821Clytia hemisphaericaexon
TCONS_00007938-exon-sc0000080-1575043694:581944..582147TCONS_00007938-exon-sc0000080-1575043694:581944..582147Clytia hemisphaericaexon
TCONS_00007938-exon-sc0000080-1575043694:580895..581786TCONS_00007938-exon-sc0000080-1575043694:580895..581786Clytia hemisphaericaexon
TCONS_00007938-exon-sc0000080-1510915933:591438..591821TCONS_00007938-exon-sc0000080-1510915933:591438..591821Clytia hemisphaericaexon
TCONS_00007938-exon-sc0000080-1510915933:581944..582147TCONS_00007938-exon-sc0000080-1510915933:581944..582147Clytia hemisphaericaexon
TCONS_00007938-exon-sc0000080-1510915933:580895..581786TCONS_00007938-exon-sc0000080-1510915933:580895..581786Clytia hemisphaericaexon
TCONS_00007938-exon-sc0000080-1491911889:591438..591821TCONS_00007938-exon-sc0000080-1491911889:591438..591821Clytia hemisphaericaexon
TCONS_00007938-exon-sc0000080-1491911889:581944..582147TCONS_00007938-exon-sc0000080-1491911889:581944..582147Clytia hemisphaericaexon
TCONS_00007938-exon-sc0000080-1491911889:580895..581786TCONS_00007938-exon-sc0000080-1491911889:580895..581786Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000080supercontigsc0000080:580895..591821 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
114.438 109.28 121.277 139.09 99.7125 64.3365 124.191 124.104 139.764 115.131 139.876 174.748 205.318 231.404 188.319 184.486 148.544 177.337 198.88 165.706 435.3 421.321 206.392 238.046 232.731 277.617 129.105 154.561 99.8367 103.789
Blast
BLAST of TCONS_00007938 vs. Swiss-Prot (Human)
Match: 4EBP2 (Eukaryotic translation initiation factor 4E-binding protein 2 OS=Homo sapiens GN=EIF4EBP2 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 3.244e-22
Identity = 53/115 (46.09%), Postives = 73/115 (63.48%), Query Frame = 3
Query:  273 TSTKSIPVRRVQIHEAHQMPSRYSETPGGTIFSTTPGGTRIIYERKFLLDLKSSPLSQT-PTKLPVIPGVTLDDNGKIIEEDESDLQTLAXXXXXXXXXXXXXXXTDDDMFEMEM 614
            + +++IP R V I +A Q+P  Y  TPGGT+FSTTPGGTRIIY+RKFLLD ++SP++QT P  LP IPGVT    G +IE+ + ++  L       +         DD  FEM++
Sbjct:   12 SQSRAIPTRTVAISDAAQLPHDYCTTPGGTLFSTTPGGTRIIYDRKFLLDRRNSPMAQTPPCHLPNIPGVT--SPGTLIEDSKVEVNNLNNLNNHDRKHAVG----DDAQFEMDI 120          
The following BLAST results are available for this feature:
BLAST of TCONS_00007938 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
4EBP23.244e-2246.09Eukaryotic translation initiation factor 4E-bindin... [more]
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