TCONS_00007946 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007946
Unique NameTCONS_00007946
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3781

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007946 ID=TCONS_00007946|Name=TCONS_00007946|organism=Clytia hemisphaerica|type=transcript|length=3781bp
TATGCATTTGACACATATAGTTTTACAAAACTGCTTACTTTAGGCTTTCT
GTTTTATCAATCTTTTTTTATCttagagagagagaaaaaaagaaaaaaaa
ttgaacaaattttagaaataaaaattttctttcttggaCGTTATCACAAA
GATTGAATTCTTATAAAGCTATGATTGAACCAGTTACAAATGACTTCTAT
CCTTGGTCATCTATTGTGTTTGGTCTTTCTGCTCCTTGGTTTGATCAAAA
TTGCAGACAATCTGACCACGACATCAGTGCAAAAGGTTTGGTTTTTGGGT
CATGTGTTACAGATTACCCCTGAAGAACATGTCGCAGAATGCAGTATTAA
ATCTTTAAAGATAATCGACCAGATTGGGGATGCATCAACTTGGTTGCAAA
TAAATGATGACATTATACATGGACTGCCACCCACCGAGGACAGATATCTT
TTTATCATTCTCATTTTTGGTGCTCCTTTTGGCAACTATATTAAACTCTG
TCATTCCATACAATATGAATTGAGAATACTGAAAGTATCTTCAAAAAGCA
TTCAATCCTACACCAGTGCTTCGAATCTGACCAAGAAAGATGAAGATGCC
AGGTTTCACATTCTGACTGTAATATTACCAACAGACAAACGAGATGATTT
GTTAGATATCGGTGAAGGCTTATCCAGAAACATTGGATTACCACTTCATT
CATTACAAGTGCTACCAGAAGATCATCCTCATGTCTTTTATAAACAATTA
CATTCATTAGAAGTTGTTTCTTCGGATGTGTCAGAAAATTCACGCAACAA
CAAGACACTCTTTTCATGGGTTATACCAACAAAANTTCGGATGTGTCAGA
AATTTCACTAAACAACAAGACACTCTTCTCATGGGTTATACCAACAAATG
TTTATAATCATacagaaatattgaaaaaactgAAGCACTCTCAACAAAAT
CATCGGAAACGTCGAGATATAGGTAGCAACTTTCAATGGCATTTAGTGCG
AGGACATATTCGCGTGAAACgagaaattttctttggttcTATCTCCGCCC
TTGTTGGAACACCCATTGAATCATCCACCCTTCCGCCACCTTCTGAATCA
AGCGTACAGACATCTCTTTATATGACATCGAGCTTCTTAAATTCTGATAG
TATTCCATCACAAACACTCTCTATGGATTCATCAATAATGGCTCTTACTT
CTGAACATCTTTCGCCCTCTGAGATCAGTATTAGCTCGTTGTTGCTAGAC
ACTGTTGTGGTTAACAGTGGGAAAGAACCAGACCCAACAATCATCACAGA
CTTTACCACAAGCATAGAGCCTTCATTCACATCAATGCCAACAAGTGTGT
TATCCAAAAATCCATCAACTGACATTATATCTGATTCATCTTTTCGCTTT
TCTACAACACAAACGATTTCCACAGACTTCACACTTGATACATCGTCATC
AATATCGCCAAGCATGCATTCTGACTTCCTTTCTTCTCCGATAAATACGA
TGTCAACGTTGAACTTCAGTTTTTCTTCACAATTTTCAAAGCCAATATCA
AACATCCAAATCAATACAAGCACTTACAAATCCGAACCTCCAACAACCCT
TGTATCCTCTGCAGTAGTATCGTCAAGTATATCTACTGGGATTGTTTCAT
CAGAATTTGATTCAacttcttcgttttcttcaaGTCTTGAAAGTATCAAT
GATAACTCAATCACCAGTCCATTTTCATCAACAATCAATTCATTATCAAG
TATTCATAGCAACATCAGCTACTCGGCAACAGacttttcaaccattttta
cCGAAACTTTCTCCACAAGCCACACACATTCATTGATGATATTAACAGAC
ACTTTATTCTCCACAATCGAAACATCATTCATTTTCTCATCCAACACAAC
GTTACTCCAGCTTTCATCATTTATTATATCAGAAAACCTCACTTCAAATT
CAGCTCCAGAAACAACAAACATTTTCCAGACATCAGACAATCTAGAAACA
CTATTACTATTGACATCAGTGTATTCAACAGCAATTAGTTCAACTTATAT
TCAATCAAGCACCGGTAAAGAAAGTAGGACTTCCATTGTCAATTATTTGA
GTAATGCTTCATCGAACGTTCACCAAATCACTCCTTCGACAAGTCATCTG
CCAGATCTTTTATCAACAGAAAACTTTTTCTCATCACTGATAACTTCCAA
TGCAATCGAATCTGAAACGTCATTAAGTCACTTGCTCCAACCATCTTCTT
CATTAGCCGATCAGattgcattttcaagcaatatcATAGAACGATCTACC
AATCAGATATCTTCGTCTGATCATGTGATCGAGCCTTCAACCTCATTAAT
TGAACACTCATCAACAGACGAAATCATCAGTCCTTCGAATTCGTTAGCCA
ATCTGGTTTCATCCTCTAACCGCGTGATAGAAACCTCGACCCCTTTGGCC
AATCAAATTTCGTCCACAGAGCGCGTGATCAAACCAACAAGCTCCTCGGC
CAATCAGATCTCTTCTTCAAACATATTTACAACAACGacgcctgtaccaa
actctccACCTATTGTTACAAATATTATTGACACCCTTTTCTTCGATTCC
GGCAAAATGACATTGTTTGAAATTCccgaaaacattttctttgactCACA
AGACGGGGGTACGAGAAATCTAACCTTGAGCTGTTTTACCGAGACCGAGA
ATTCATTCAACATTATTTGGCTTGAATTCAACTCGACCACCCAGACTTTA
TCAGCATTTCCTTTATCCTATGACTATGATAATCAAGACCAATCTCAATT
GATACACGTCCGCGCATACGATAGTAATGGGCTACATACAACAACACAGT
TTCGTGTGGCTATAACGGCTCCTCTGAAGTCTGTTTCATATCTCATCTCA
ATGAAACTCTTACTGGATTTCGAAACGTTTGTTAATTCACACTCAATGAG
GTTCGATTTGATGAATCAAGTCTTGCAGTTTTACGGTGAGGGTGTTACTG
ATAGTTCTCTGTACTTTCACTCTGTAACAAATGGGTCTACCATTTTGGAA
TTCAATAATGCGTCCATAGCAACAAGGAATACATGTGACAGAACGTTGAT
TGACCAAAATGTGGAAGTCGTCAAGCAGCCCAACACGAACAGTGCACAGA
AAAGTTTCAAAGATTCTTTAGCACCCGAGTTCCCTATCGTTGATATGGAT
TTGAAATATTCAGGCGTTTGTATCACTTCGCCCACTCCCGCCCCAATTGG
AACGGGTGTTGACGACAATAAATACTTGGAATACTTGATACCAATAATCG
TTTTAATTATCATCCTCATTATTGTCATTATCATTGTTTGTATTGTCTTT
CGACGTCAACGGAACAAGCGGACCTTTTACGTCGGTAGTCGGCGCTATGA
GAAAGGCCAGCCTGTTTTATTTCCAGACGAACTTGAACTACAAGCTCCTC
CTAAGAAGAGACATCCACCTGAAGAGGACTTGCGTTTGGGTGCTTATGAC
GGACCGTATGATAACACTAGTCTTGATATCCCGGATTACGGAGCGCGAGG
TGCAAAAGCATCGAGTATAAGCTCGGATGATGATTCGCTTGACAGTTTCT
ACAAAGCTCCAAGCGAGTCACCACCTGAATATGTAGCCCCTCCACCATAT
AGATTCCCTTACGATGGACACAGCTCTGAAatataaacattttgaaaata
cttaGTTAGACTGTCAATTTTCGCTTCAatttattaaaatcaatttcaat
TATCGATTTCGCGACAGCCATTAGATTAAAC
Run BLAST on NCBI

protein sequence of TCONS_00007946-protein

>TCONS_00007946-protein ID=TCONS_00007946-protein|Name=TCONS_00007946-protein|organism=Clytia hemisphaerica|type=polypeptide|length=956bp
MGYTNKXSDVSEISLNNKTLFSWVIPTNVYNHTEILKKLKHSQQNHRKRR
DIGSNFQWHLVRGHIRVKREIFFGSISALVGTPIESSTLPPPSESSVQTS
LYMTSSFLNSDSIPSQTLSMDSSIMALTSEHLSPSEISISSLLLDTVVVN
SGKEPDPTIITDFTTSIEPSFTSMPTSVLSKNPSTDIISDSSFRFSTTQT
ISTDFTLDTSSSISPSMHSDFLSSPINTMSTLNFSFSSQFSKPISNIQIN
TSTYKSEPPTTLVSSAVVSSSISTGIVSSEFDSTSSFSSSLESINDNSIT
SPFSSTINSLSSIHSNISYSATDFSTIFTETFSTSHTHSLMILTDTLFST
IETSFIFSSNTTLLQLSSFIISENLTSNSAPETTNIFQTSDNLETLLLLT
SVYSTAISSTYIQSSTGKESRTSIVNYLSNASSNVHQITPSTSHLPDLLS
TENFFSSLITSNAIESETSLSHLLQPSSSLADQIAFSSNIIERSTNQISS
SDHVIEPSTSLIEHSSTDEIISPSNSLANLVSSSNRVIETSTPLANQISS
TERVIKPTSSSANQISSSNIFTTTTPVPNSPPIVTNIIDTLFFDSGKMTL
FEIPENIFFDSQDGGTRNLTLSCFTETENSFNIIWLEFNSTTQTLSAFPL
SYDYDNQDQSQLIHVRAYDSNGLHTTTQFRVAITAPLKSVSYLISMKLLL
DFETFVNSHSMRFDLMNQVLQFYGEGVTDSSLYFHSVTNGSTILEFNNAS
IATRNTCDRTLIDQNVEVVKQPNTNSAQKSFKDSLAPEFPIVDMDLKYSG
VCITSPTPAPIGTGVDDNKYLEYLIPIIVLIIILIIVIIIVCIVFRRQRN
KRTFYVGSRRYEKGQPVLFPDELELQAPPKKRHPPEEDLRLGAYDGPYDN
TSLDIPDYGARGAKASSISSDDDSLDSFYKAPSESPPEYVAPPPYRFPYD
GHSSEI
Run BLAST on NCBI

transcript from alignment at sc0000080:650956..654922-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007946 ID=TCONS_00007946|Name=TCONS_00007946|organism=Clytia hemisphaerica|type=transcript|length=3967bp|location=Sequence derived from alignment at sc0000080:650956..654922- (Clytia hemisphaerica)
TATGCATTTGACACATATAGTTTTACAAAACTGCTTACTTTAGGCTTTCT GTTTTATCAATCTTTTTTTATCTTAGAGAGAGAGAAAAAAAGAAAAAAAA TTGAACAAATTTTAGAAATAAAAATTTTCTTTCTTGGACGTTATCACAAA GATTGAATTCTTATAAAGCTATGATTGAACCAGTTACAAATGACTTCTAT CCTTGGTCATCTATTGTGTTTGGTCTTTCTGCTCCTTGGTTTGATCAAAA TTGCAGACAATCTGACCACGACATCAGTGCAAAAGGTTTGGTTTTTGGGT CATGTGTTACAGATTACCCCTGAAGAACATGTCGCAGAATGCAGTATTAA ATCTTTAAAGGTGAGGCTTTAAAATCTTGTTTAAGAATGCAATATCAGGT ATCAATTATATGCCTTTTAGCAGCAGTTAAAATGTTGCCTATCACTTTTG ATAACTTCATGCAAGAAATATATATAATTGTCCAGAAATTTTGAAAATTC TTTTTAAAAGTCTCACAATTTTCTGTCTTTATTTCACTTACTTCAGATAA TCGACCAGATTGGGGATGCATCAACTTGGTTGCAAATAAATGATGACATT ATACATGGACTGCCACCCACCGAGGACAGATATCTTTTTATCATTCTCAT TTTTGGTGCTCCTTTTGGCAACTATATTAAACTCTGTCATTCCATACAAT ATGAATTGAGAATACTGAAAGTATCTTCAAAAAGCATTCAATCCTACACC AGTGCTTCGAATCTGACCAAGAAAGATGAAGATGCCAGGTTTCACATTCT GACTGTAATATTACCAACAGACAAACGAGATGATTTGTTAGATATCGGTG AAGGCTTATCCAGAAACATTGGATTACCACTTCATTCATTACAAGTGCTA CCAGAAGATCATCCTCATGTCTTTTATAAACAATTACATTCATTAGAAGT TGTTTCTTCGGATGTGTCAGAAAATTCACGCAACAACAAGACACTCTTTT CATGGGTTATACCAACAAAANTTCGGATGTGTCAGAAATTTCACTAAACA ACAAGACACTCTTCTCATGGGTTATACCAACAAATGTTTATAATCATACA GAAATATTGAAAAAACTGAAGCACTCTCAACAAAATCATCGGAAACGTCG AGATATAGGTAGCAACTTTCAATGGCATTTAGTGCGAGGACATATTCGCG TGAAACGAGAAATTTTCTTTGGTTCTATCTCCGCCCTTGTTGGAACACCC ATTGAATCATCCACCCTTCCGCCACCTTCTGAATCAAGCGTACAGACATC TCTTTATATGACATCGAGCTTCTTAAATTCTGATAGTATTCCATCACAAA CACTCTCTATGGATTCATCAATAATGGCTCTTACTTCTGAACATCTTTCG CCCTCTGAGATCAGTATTAGCTCGTTGTTGCTAGACACTGTTGTGGTTAA CAGTGGGAAAGAACCAGACCCAACAATCATCACAGACTTTACCACAAGCA TAGAGCCTTCATTCACATCAATGCCAACAAGTGTGTTATCCAAAAATCCA TCAACTGACATTATATCTGATTCATCTTTTCGCTTTTCTACAACACAAAC GATTTCCACAGACTTCACACTTGATACATCGTCATCAATATCGCCAAGCA TGCATTCTGACTTCCTTTCTTCTCCGATAAATACGATGTCAACGTTGAAC TTCAGTTTTTCTTCACAATTTTCAAAGCCAATATCAAACATCCAAATCAA TACAAGCACTTACAAATCCGAACCTCCAACAACCCTTGTATCCTCTGCAG TAGTATCGTCAAGTATATCTACTGGGATTGTTTCATCAGAATTTGATTCA ACTTCTTCGTTTTCTTCAAGTCTTGAAAGTATCAATGATAACTCAATCAC CAGTCCATTTTCATCAACAATCAATTCATTATCAAGTATTCATAGCAACA TCAGCTACTCGGCAACAGACTTTTCAACCATTTTTACCGAAACTTTCTCC ACAAGCCACACACATTCATTGATGATATTAACAGACACTTTATTCTCCAC AATCGAAACATCATTCATTTTCTCATCCAACACAACGTTACTCCAGCTTT CATCATTTATTATATCAGAAAACCTCACTTCAAATTCAGCTCCAGAAACA ACAAACATTTTCCAGACATCAGACAATCTAGAAACACTATTACTATTGAC ATCAGTGTATTCAACAGCAATTAGTTCAACTTATATTCAATCAAGCACCG GTAAAGAAAGTAGGACTTCCATTGTCAATTATTTGAGTAATGCTTCATCG AACGTTCACCAAATCACTCCTTCGACAAGTCATCTGCCAGATCTTTTATC AACAGAAAACTTTTTCTCATCACTGATAACTTCCAATGCAATCGAATCTG AAACGTCATTAAGTCACTTGCTCCAACCATCTTCTTCATTAGCCGATCAG ATTGCATTTTCAAGCAATATCATAGAACGATCTACCAATCAGATATCTTC GTCTGATCATGTGATCGAGCCTTCAACCTCATTAATTGAACACTCATCAA CAGACGAAATCATCAGTCCTTCGAATTCGTTAGCCAATCTGGTTTCATCC TCTAACCGCGTGATAGAAACCTCGACCCCTTTGGCCAATCAAATTTCGTC CACAGAGCGCGTGATCAAACCAACAAGCTCCTCGGCCAATCAGATCTCTT CTTCAAACATATTTACAACAACGACGCCTGTACCAAACTCTCCACCTATT GTTACAAATATTATTGACACCCTTTTCTTCGATTCCGGCAAAATGACATT GTTTGAAATTCCCGAAAACATTTTCTTTGACTCACAAGACGGGGGTACGA GAAATCTAACCTTGAGCTGTTTTACCGAGACCGAGAATTCATTCAACATT ATTTGGCTTGAATTCAACTCGACCACCCAGACTTTATCAGCATTTCCTTT ATCCTATGACTATGATAATCAAGACCAATCTCAATTGATACACGTCCGCG CATACGATAGTAATGGGCTACATACAACAACACAGTTTCGTGTGGCTATA ACGGCTCCTCTGAAGTCTGTTTCATATCTCATCTCAATGAAACTCTTACT GGATTTCGAAACGTTTGTTAATTCACACTCAATGAGGTTCGATTTGATGA ATCAAGTCTTGCAGTTTTACGGTGAGGGTGTTACTGATAGTTCTCTGTAC TTTCACTCTGTAACAAATGGGTCTACCATTTTGGAATTCAATAATGCGTC CATAGCAACAAGGAATACATGTGACAGAACGTTGATTGACCAAAATGTGG AAGTCGTCAAGCAGCCCAACACGAACAGTGCACAGAAAAGTTTCAAAGAT TCTTTAGCACCCGAGTTCCCTATCGTTGATATGGATTTGAAATATTCAGG CGTTTGTATCACTTCGCCCACTCCCGCCCCAATTGGAACGGGTGTTGACG ACAATAAATACTTGGAATACTTGATACCAATAATCGTTTTAATTATCATC CTCATTATTGTCATTATCATTGTTTGTATTGTCTTTCGACGTCAACGGAA CAAGCGGACCTTTTACGTCGGTAGTCGGCGCTATGAGAAAGGCCAGCCTG TTTTATTTCCAGACGAACTTGAACTACAAGCTCCTCCTAAGAAGAGACAT CCACCTGAAGAGGACTTGCGTTTGGGTGCTTATGACGGACCGTATGATAA CACTAGTCTTGATATCCCGGATTACGGAGCGCGAGGTGCAAAAGCATCGA GTATAAGCTCGGATGATGATTCGCTTGACAGTTTCTACAAAGCTCCAAGC GAGTCACCACCTGAATATGTAGCCCCTCCACCATATAGATTCCCTTACGA TGGACACAGCTCTGAAATATAAACATTTTGAAAATACTTAGTTAGACTGT CAATTTTCGCTTCAATTTATTAAAATCAATTTCAATTATCGATTTCGCGA CAGCCATTAGATTAAAC

Coding sequence (CDS) from alignment at sc0000080:650956..654922-

>TCONS_00007946 ID=TCONS_00007946|Name=TCONS_00007946|organism=Clytia hemisphaerica|type=CDS|length=2871bp|location=Sequence derived from alignment at sc0000080:650956..654922- (Clytia hemisphaerica)
ATGGGTTATACCAACAAAANTTCGGATGTGTCAGAAATTTCACTAAACAA
CAAGACACTCTTCTCATGGGTTATACCAACAAATGTTTATAATCATACAG
AAATATTGAAAAAACTGAAGCACTCTCAACAAAATCATCGGAAACGTCGA
GATATAGGTAGCAACTTTCAATGGCATTTAGTGCGAGGACATATTCGCGT
GAAACGAGAAATTTTCTTTGGTTCTATCTCCGCCCTTGTTGGAACACCCA
TTGAATCATCCACCCTTCCGCCACCTTCTGAATCAAGCGTACAGACATCT
CTTTATATGACATCGAGCTTCTTAAATTCTGATAGTATTCCATCACAAAC
ACTCTCTATGGATTCATCAATAATGGCTCTTACTTCTGAACATCTTTCGC
CCTCTGAGATCAGTATTAGCTCGTTGTTGCTAGACACTGTTGTGGTTAAC
AGTGGGAAAGAACCAGACCCAACAATCATCACAGACTTTACCACAAGCAT
AGAGCCTTCATTCACATCAATGCCAACAAGTGTGTTATCCAAAAATCCAT
CAACTGACATTATATCTGATTCATCTTTTCGCTTTTCTACAACACAAACG
ATTTCCACAGACTTCACACTTGATACATCGTCATCAATATCGCCAAGCAT
GCATTCTGACTTCCTTTCTTCTCCGATAAATACGATGTCAACGTTGAACT
TCAGTTTTTCTTCACAATTTTCAAAGCCAATATCAAACATCCAAATCAAT
ACAAGCACTTACAAATCCGAACCTCCAACAACCCTTGTATCCTCTGCAGT
AGTATCGTCAAGTATATCTACTGGGATTGTTTCATCAGAATTTGATTCAA
CTTCTTCGTTTTCTTCAAGTCTTGAAAGTATCAATGATAACTCAATCACC
AGTCCATTTTCATCAACAATCAATTCATTATCAAGTATTCATAGCAACAT
CAGCTACTCGGCAACAGACTTTTCAACCATTTTTACCGAAACTTTCTCCA
CAAGCCACACACATTCATTGATGATATTAACAGACACTTTATTCTCCACA
ATCGAAACATCATTCATTTTCTCATCCAACACAACGTTACTCCAGCTTTC
ATCATTTATTATATCAGAAAACCTCACTTCAAATTCAGCTCCAGAAACAA
CAAACATTTTCCAGACATCAGACAATCTAGAAACACTATTACTATTGACA
TCAGTGTATTCAACAGCAATTAGTTCAACTTATATTCAATCAAGCACCGG
TAAAGAAAGTAGGACTTCCATTGTCAATTATTTGAGTAATGCTTCATCGA
ACGTTCACCAAATCACTCCTTCGACAAGTCATCTGCCAGATCTTTTATCA
ACAGAAAACTTTTTCTCATCACTGATAACTTCCAATGCAATCGAATCTGA
AACGTCATTAAGTCACTTGCTCCAACCATCTTCTTCATTAGCCGATCAGA
TTGCATTTTCAAGCAATATCATAGAACGATCTACCAATCAGATATCTTCG
TCTGATCATGTGATCGAGCCTTCAACCTCATTAATTGAACACTCATCAAC
AGACGAAATCATCAGTCCTTCGAATTCGTTAGCCAATCTGGTTTCATCCT
CTAACCGCGTGATAGAAACCTCGACCCCTTTGGCCAATCAAATTTCGTCC
ACAGAGCGCGTGATCAAACCAACAAGCTCCTCGGCCAATCAGATCTCTTC
TTCAAACATATTTACAACAACGACGCCTGTACCAAACTCTCCACCTATTG
TTACAAATATTATTGACACCCTTTTCTTCGATTCCGGCAAAATGACATTG
TTTGAAATTCCCGAAAACATTTTCTTTGACTCACAAGACGGGGGTACGAG
AAATCTAACCTTGAGCTGTTTTACCGAGACCGAGAATTCATTCAACATTA
TTTGGCTTGAATTCAACTCGACCACCCAGACTTTATCAGCATTTCCTTTA
TCCTATGACTATGATAATCAAGACCAATCTCAATTGATACACGTCCGCGC
ATACGATAGTAATGGGCTACATACAACAACACAGTTTCGTGTGGCTATAA
CGGCTCCTCTGAAGTCTGTTTCATATCTCATCTCAATGAAACTCTTACTG
GATTTCGAAACGTTTGTTAATTCACACTCAATGAGGTTCGATTTGATGAA
TCAAGTCTTGCAGTTTTACGGTGAGGGTGTTACTGATAGTTCTCTGTACT
TTCACTCTGTAACAAATGGGTCTACCATTTTGGAATTCAATAATGCGTCC
ATAGCAACAAGGAATACATGTGACAGAACGTTGATTGACCAAAATGTGGA
AGTCGTCAAGCAGCCCAACACGAACAGTGCACAGAAAAGTTTCAAAGATT
CTTTAGCACCCGAGTTCCCTATCGTTGATATGGATTTGAAATATTCAGGC
GTTTGTATCACTTCGCCCACTCCCGCCCCAATTGGAACGGGTGTTGACGA
CAATAAATACTTGGAATACTTGATACCAATAATCGTTTTAATTATCATCC
TCATTATTGTCATTATCATTGTTTGTATTGTCTTTCGACGTCAACGGAAC
AAGCGGACCTTTTACGTCGGTAGTCGGCGCTATGAGAAAGGCCAGCCTGT
TTTATTTCCAGACGAACTTGAACTACAAGCTCCTCCTAAGAAGAGACATC
CACCTGAAGAGGACTTGCGTTTGGGTGCTTATGACGGACCGTATGATAAC
ACTAGTCTTGATATCCCGGATTACGGAGCGCGAGGTGCAAAAGCATCGAG
TATAAGCTCGGATGATGATTCGCTTGACAGTTTCTACAAAGCTCCAAGCG
AGTCACCACCTGAATATGTAGCCCCTCCACCATATAGATTCCCTTACGAT
GGACACAGCTCTGAAATATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004479XLOC_004479Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007946-proteinTCONS_00007946-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007946-exon-sc0000080-1575043694:654563..654922TCONS_00007946-exon-sc0000080-1575043694:654563..654922Clytia hemisphaericaexon
TCONS_00007946-exon-sc0000080-1575043694:650956..654376TCONS_00007946-exon-sc0000080-1575043694:650956..654376Clytia hemisphaericaexon
TCONS_00007946-exon-sc0000080-1510915933:654563..654922TCONS_00007946-exon-sc0000080-1510915933:654563..654922Clytia hemisphaericaexon
TCONS_00007946-exon-sc0000080-1510915933:650956..654376TCONS_00007946-exon-sc0000080-1510915933:650956..654376Clytia hemisphaericaexon
TCONS_00007946-exon-sc0000080-1491911889:654563..654922TCONS_00007946-exon-sc0000080-1491911889:654563..654922Clytia hemisphaericaexon
TCONS_00007946-exon-sc0000080-1491911889:650956..654376TCONS_00007946-exon-sc0000080-1491911889:650956..654376Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000080supercontigsc0000080:650956..654922 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.97602 4.97832 4.0621 3.41068 21.1244 16.3538 7.44032 8.45731 5.24642 5.63008 5.73782 3.66953 1.37396 1.04271 0.400427 0.538663 1.46139 1.41091 1.65763 1.685 1.38749 1.01516 2.10246 2.72294 2.74478 3.90054 4.14629 3.61672 1.86303 1.988
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR008465DAG1
IPR030398SEA_DG_dom
IPR015919Cadherin-like
Vocabulary: Cellular Component
TermDefinition
GO:0016010dystrophin-associated glycoprotein complex
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007016cytoskeletal anchoring at plasma membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007016 cytoskeletal anchoring at plasma membrane
cellular_component GO:0016010 dystrophin-associated glycoprotein complex
cellular_component GO:0016020 membrane
molecular_function GO:0005509 calcium ion binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007946 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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