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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008051 ID=TCONS_00008051|Name=TCONS_00008051|organism=Clytia hemisphaerica|type=transcript|length=1093bp
caaatttcgagaatttttggAAACACttgcgaaaatcgcgaaatttaaag
CTGGCGAAAaataatccacttaaggtaaaaccattttatgaaaaaacaaa
aatttcaaaaaccaaGGATAAGTAAAGCTCAATCAAACTCAAGTAAAACA
GAGTGGCCGAAGATGAGCCAAATTCCAACGATTTCTTACAAAGAAAGGGC
TTTCTCAGTACCATGAAATAACCGAATTTAATTTGTTAACATTTCCTACA
ATTTATATTAGAATTGAAACAATAAAGAGTGCAGTTCGAGAAATGTTGAG
GCTGTTTTGTGGCTTACTGTTTATGGTAACCTTTCTTAGGAGTAGTCATG
CACAACTGCGATGGACTAAAAACgGTTTCAAAAGGAAGAGAGGATTTCAA
CGTATATCGTTTCATTatgatatgaaaaaaatcgaaGAAGAAATCTTAAA
cgaattgaatttcaatgatAGAGGTTTTATGGATGACCAAGAGAATCTGG
CACTCGAGGAAAACAATTATCAAGGCGATGCTAGACGTGTAGGTGATAAT
CGAATAGAGATTTACGACGTCGATAACAATGAAAATGCAGGCTACCGGAT
GGGAAATTACTACGGAGACAAAAGAGAGAAGCATAACATTCGAATCGAAA
ACAATGACGACAATGATGAAATAATGCAAAAAAATCTCaacaatttcaaa
tcaaaattatttgaagAAAATCGGTATTTTCGGAACAAAAAttacgatga
cgtcatcactgtCAAAGATTCAATACTGGGGATAGAgtttttgaaaagga
aaatattgaaAGCATTATATGATAACGACGATGGTGAAAATGAATCTGTt
cgaaaaaatgatgaaaaaaacgACAGTGGAAAATATAGAANgtgcgcaga
gtcatttacagatttttcttgtaacaatgagaagacaatggatctctctt
gggagcaacgagagaagttaatccacctattctaatccgttggaccgtgg
tacttaaagggacataacagtacttgcgaaatttgtaaacaaactgtatg
cagcagatacaaaatcaaaacaaatgtcacatgtcaaaataaa Run BLAST on NCBI protein sequence of TCONS_00008051-protein >TCONS_00008051-protein ID=TCONS_00008051-protein|Name=TCONS_00008051-protein|organism=Clytia hemisphaerica|type=polypeptide|length=230bp
MLRLFCGLLFMVTFLRSSHAQLRWTKNGFKRKRGFQRISFHYDMKKIEEE
ILNELNFNDRGFMDDQENLALEENNYQGDARRVGDNRIEIYDVDNNENAG
YRMGNYYGDKREKHNIRIENNDDNDEIMQKNLNNFKSKLFEENRYFRNKN
YDDVITVKDSILGIEFLKRKILKALYDNDDGENESVRKNDEKNDSGKYRX
CAESFTDFSCNNEKTMDLSWEQREKLIHLF Run BLAST on NCBI transcript from alignment at sc0000081:611917..613303- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008051 ID=TCONS_00008051|Name=TCONS_00008051|organism=Clytia hemisphaerica|type=transcript|length=1387bp|location=Sequence derived from alignment at sc0000081:611917..613303- (Clytia hemisphaerica)
CAAATTTCGAGAATTTTTGGAAACACTTGCGAAAATCGCGAAATTTAAAG
CTGGCGAAAAATAATCCACTTAAGGTAAAACCATTTTATGAAAAAACAAA
AATTTCAAAAACCAAGGATAAGTAAAGCTCAATCAAACTCAAGTAAAACA
GAGTGGCCGAAGATGAGCCAAATTCCAACGATTTCTTACAAAGAAAGGGC
TTTCTCAGTACCATGAAATAACCGAATTTAATTTGTTAACATTTCCTACA
ATTTATATTAGAATTGAAACAATAAAGAGTGCAGTTCGAGAAATGTTGAG
GCTGTTTTGTGGCTTACTGTTTATGGTAACCTTTCTTAGGAGTAGTCATG
CACAACTGCGATGGACTAAAAACGTAAGTGAATTTTTACATATCTTTTGC
ATCTGGAGATTCAAGTCGGGCTTTTAAAATCTTCAACTTTTAATAAACGT
GGAAGTGAGGCCTAATTTCTGGGGAAGTGTTGAGCTCCGGGCTTCCAAAC
ACACCTTTTATTATAGGTATTTATAAACTAAAACCTGGCTTTTTAGAGCA
AAATAAGAGAATCTTCTTTTTTCAAAAATCTATAATCTGGAGAGGGTAGG
TGTTGGCGGGGTAGGGCGTTAATTAGACATCTTCATTACTTCAATTTTCC
ATTTTTTTTCCTTTCAGGGTTTCAAAAGGAAGAGAGGATTTCAACGTATA
TCGTTTCATTATGATATGAAAAAAATCGAAGAAGAAATCTTAAACGAATT
GAATTTCAATGATAGAGGTTTTATGGATGACCAAGAGAATCTGGCACTCG
AGGAAAACAATTATCAAGGCGATGCTAGACGTGTAGGTGATAATCGAATA
GAGATTTACGACGTCGATAACAATGAAAATGCAGGCTACCGGATGGGAAA
TTACTACGGAGACAAAAGAGAGAAGCATAACATTCGAATCGAAAACAATG
ACGACAATGATGAAATAATGCAAAAAAATCTCAACAATTTCAAATCAAAA
TTATTTGAAGAAAATCGGTATTTTCGGAACAAAAATTACGATGACGTCAT
CACTGTCAAAGATTCAATACTGGGGATAGAGTTTTTGAAAAGGAAAATAT
TGAAAGCATTATATGATAACGACGATGGTGAAAATGAATCTGTTCGAAAA
AATGATGAAAAAAACGACAGTGGAAAATATAGAANGTGCGCAGAGTCATT
TACAGATTTTTCTTGTAACAATGAGAAGACAATGGATCTCTCTTGGGAGC
AACGAGAGAAGTTAATCCACCTATTCTAATCCGTTGGACCGTGGTACTTA
AAGGGACATAACAGTACTTGCGAAATTTGTAAACAAACTGTATGCAGCAG
ATACAAAATCAAAACAAATGTCACATGTCAAAATAAA Coding sequence (CDS) from alignment at sc0000081:611917..613303- >TCONS_00008051 ID=TCONS_00008051|Name=TCONS_00008051|organism=Clytia hemisphaerica|type=CDS|length=693bp|location=Sequence derived from alignment at sc0000081:611917..613303- (Clytia hemisphaerica)
ATGTTGAGGCTGTTTTGTGGCTTACTGTTTATGGTAACCTTTCTTAGGAG
TAGTCATGCACAACTGCGATGGACTAAAAACGGTTTCAAAAGGAAGAGAG
GATTTCAACGTATATCGTTTCATTATGATATGAAAAAAATCGAAGAAGAA
ATCTTAAACGAATTGAATTTCAATGATAGAGGTTTTATGGATGACCAAGA
GAATCTGGCACTCGAGGAAAACAATTATCAAGGCGATGCTAGACGTGTAG
GTGATAATCGAATAGAGATTTACGACGTCGATAACAATGAAAATGCAGGC
TACCGGATGGGAAATTACTACGGAGACAAAAGAGAGAAGCATAACATTCG
AATCGAAAACAATGACGACAATGATGAAATAATGCAAAAAAATCTCAACA
ATTTCAAATCAAAATTATTTGAAGAAAATCGGTATTTTCGGAACAAAAAT
TACGATGACGTCATCACTGTCAAAGATTCAATACTGGGGATAGAGTTTTT
GAAAAGGAAAATATTGAAAGCATTATATGATAACGACGATGGTGAAAATG
AATCTGTTCGAAAAAATGATGAAAAAAACGACAGTGGAAAATATAGAANG
TGCGCAGAGTCATTTACAGATTTTTCTTGTAACAATGAGAAGACAATGGA
TCTCTCTTGGGAGCAACGAGAGAAGTTAATCCACCTATTCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008051-exon-sc0000081-1575043694:612931..613303 | TCONS_00008051-exon-sc0000081-1575043694:612931..613303 | Clytia hemisphaerica | exon |
| TCONS_00008051-exon-sc0000081-1575043694:611917..612636 | TCONS_00008051-exon-sc0000081-1575043694:611917..612636 | Clytia hemisphaerica | exon |
| TCONS_00008051-exon-sc0000081-1510915933:612931..613303 | TCONS_00008051-exon-sc0000081-1510915933:612931..613303 | Clytia hemisphaerica | exon |
| TCONS_00008051-exon-sc0000081-1510915933:611917..612636 | TCONS_00008051-exon-sc0000081-1510915933:611917..612636 | Clytia hemisphaerica | exon |
| TCONS_00008051-exon-sc0000081-1491911889:612931..613303 | TCONS_00008051-exon-sc0000081-1491911889:612931..613303 | Clytia hemisphaerica | exon |
| TCONS_00008051-exon-sc0000081-1491911889:611917..612636 | TCONS_00008051-exon-sc0000081-1491911889:611917..612636 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000081 | supercontig | sc0000081:611917..613303 - |
Blast
The following BLAST results are available for this feature:
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