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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008056 ID=TCONS_00008056|Name=TCONS_00008056|organism=Clytia hemisphaerica|type=transcript|length=1623bp
ATGAAATACCAGATACATAAAACTTTTTGCTATAGGTCAGCCTGCCCAGC
AAATAAAGGAATACcctaaaggaagaaattttggcagaaatttaatttgg
cgaatggtgggaaaagttttttctgggaaaatttaatttggtggatggct
CTAATAATTAAACTTAGTTGGTGAAAGTTATTTAGGCCAAACAAACtcta
ttaaataagcaaaaaaaactgaaaataccaaaatttcttcctttaaggtt
aATAAGTgattaaattttggaaaaataaaatgagAATATTCTTACCTGAG
GATGATAGAGAAAGGCAGGCATTGTTTGTCTCTGATACCTGTAAGGAAAC
AGAAAGATGAAATTCAAATCCTGCAAGTTGGAACAAATTCTTGTGCGGAA
CAACCATTACAAATTTCTAACGCTATCTGCCTGCTGACTTTATATGCTAG
GATTGCTATGTCTGAGATGTATGTCATCCGTCTGAAGTACAGATTCTTTA
AGTGGTGTCACATTCGCAGGAANTAGGATTGCTATGTCTGAGATGTATGT
CATCCGTCTGAAGTACAGATTCTTAAGTGGTGTCACATTCGCaggaaaac
aaacaaaaccatTAACTTGCTGTCAATAAACCgtcaaaacaaattcaaaa
attttaaagtgttCCTTGAACAAAATCTCAACAAGTTTGAATTTATATGT
TGTCTAGCACTTTGAGTTTTCACGGAGCCAGAGGCGGGCGGGGCACTTTA
TGCTGTTGGCAGTTGCTTAACGAGGTGGTTAattccaaaaatatttattt
cattatCAGAGTGAATGACCTGATGATCAAAATGTATTGCCTTTACAATA
GTATCGCTGATCGAAGGAAGGACGAAAGATATGCAAACCCAAAACTTACA
TAGTATAAGAGgtACTCAGCAAGATTTACTGTTTATATTCCACATCCCAA
CGCTTGAAGAGAAGAATGAGACATTGAGAAATTTCTTCGTTTTTTAAATG
TTCAGGATAAAGAAGGAGGAGTAGAAATAGAAACGAAATGAAAACTCTGC
ACCCCAGGAAATCACACACAGCAGAACATCTAAAAACATGTAAATAATAT
AAACCCTTTCTTATACAAATTTACAAGCTTGAATAACACCAGAAAATTCG
AATTCCAAGCAGTAGTGTCAAACGATTTTGATCGCTCTGCTACCACATTC
ATTCATCAAACAAGAGCTACATGTAAACAACATAAAATAAACGTGTTTTT
TGCACAAGAAACATGTAAACACAGCACGCGACTatggctaccattttgaa
ccATACTAACAACGATGAAACTCGTCCAATGAGAGCGCGAGAAAAGACAT
GTTCGTTACGTAATCAATTTACAAGATTTTTATAGGAATTATAATCTTat
aaaagttataaaaattaTTGTGGTCTTGTAAATTTCAAAGTTAAATAATT
TTGCGAACGTTttagctttttcaattttttttttttagtttatcTGATCC
GATTTGCAAATCACCAAAGACCTTTTGCATTTCCTTGATTTTTCACTTGC
CATTCACgaaattctaaaatttaaattttcttataaaaaatgtgttaaAA
CTGTGAAATAGGTTAAGCAAGAT Run BLAST on NCBI transcript from alignment at sc0000081:688929..695942- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008056 ID=TCONS_00008056|Name=TCONS_00008056|organism=Clytia hemisphaerica|type=transcript|length=7014bp|location=Sequence derived from alignment at sc0000081:688929..695942- (Clytia hemisphaerica)
ATGAAATACCAGATACATAAAACTTTTTGCTATAGGTCAGCCTGCCCAGC
AAATAAAGGAATACCCTAAAGGAAGAAATTTTGGCAGAAATTTAATTTGG
CGAATGGTGGGAAAAGTTTTTTCTGGGAAAATTTAATTTGGTGGATGGCT
CTAATAATTAAACTTAGTTGGTGAAAGTTATTTAGGCCAAACAAACTCTA
TTAAATAAGCAAAAAAAACTGAAAATACCAAAATTTCTTCCTTTAAGGTT
AATAAGTGATTAAATTTTGGAAAAATAAAATGAGAATATTCTTACCTGAG
GATGATAGAGAAAGGCAGGCATTGTTTGTCTCTGATACCTGTAAGGAAAC
AGAAAGATGAAATTCAAATCCTGCAAGTTGGAACAAATTCTTGTGCGGAA
CAACCATTACAAATTTCTAACGCTATCTGCCTGCTGACTTTATATGCTAG
GATTGCTATGTCTGAGATGTATGTCATCCGTCTGAAGTACAGATTCTTTA
AGTGGTGTCACATTCGCAGGAANTAGGATTGCTATGTCTGAGATGTATGT
CATCCGTCTGAAGTACAGATTCTTAAGTGGTGTCACATTCGCAGGAAAAC
AAACAAAACCATTAACTTGCTGTCAATAAACCGTCAAAACAAATTCAAAA
ATTTTAAAGTGTTCCTTGAACAAAATCTCAACAAGTTTGAATTTATATGT
TGTCTAGCACTTTGAGTTTTCACGGAGCCAGAGGCGGGCGGGGCACTTTA
TGCTGTTGGCAGTTGCTTAACGAGGTGGTTAATTCCAAAAATATTTATTT
CATTATCAGAGTGAATGACCTGATGATCAAAATGTATTGCCTTTACAATA
GTATCGCTGATCGAAGGAAGGACGAAAGATATGCAAACCCAAAACTTACA
TAGTATAAGAGGTATGGTTTTTTTCTCCATTCCTCCTCATGGTTTCCTTG
ATGCATTCTTTATCTCTGATCGCTCGGTGATTCTTCGCAAGGGACATAGT
TCAAACATTTCATTCCTCTTATTAGTTTTTTTTTTCAATTTTTATGTGTT
TTGATTTTAATTCTGTTCAGGGAAATTTCGAATTGAAAATATTTTACTGA
AATAATTGTTCAATGCATATTTTTTGAACAAAATATCAAAAAGAAATGTT
CTCTCTTAAAAACTCAGAACCATTTTCACTCAAAAATATAGCGTTCAAAG
TAAGTATACAATGTGCAATTTGAAGGTTAGATTACAGGTTACAAGACAAA
ACCAACTTAATTTATAGTTCTACGGACCCGACCGACCCTGTTTTTTATCC
AAAATTGAAAAAATAATAGTATTGAATTTGCAATGCTGGAGGATTGACTT
CAGTTTTTTGCAGATATTCGTAACTGAACAAGTTGAAAAAGTGTAAATTC
TTCCTAAAACGTTAATGAATTTAAAATATCCTGGAATGGAAATGGCACAA
AAGTTGCTCATCTATAAAGTGGAAAAAGTCTACTTTATTTTCATCATAAT
GACCGACTGACCCATTTTTTTTTAGAGGTCTTCCCGTAGAACAATAAATT
AAATTTGTCTCGCCTAATCAAAGAATAACCTTAGAAACCAGGGTAGAAAT
ATAAGCTAGATATACAAAATTTGTTTATTTATGTAGCAGCATTAAAAAAA
AGTTGTAATACAACACTAAAATAACCTTGATTGTGCAGAGAATCAAATTA
CCCATGTTGTTTTGGCAAACTTCTACTTGAAAAAAAAACCTGGAAATTAT
GTTTACTCTAATAGCAGCGACAGAGTCCTGTATTAACCAAACCGATAATC
ATGTGAGAACGTACCAAGAAAAACAAAAACAACTACTTGACGCAAAATGA
CAAACACAGTTCCTGTACTCTACATGTTTACATTTTTGCATTTCAGAGAT
TTAGACATAATACAAATACAAGTCAAGTCTGTAAGAATATTCAAAAATAA
ATTCTGACCAGGAAGTAAGTGTCACAGGGATAGTGATTAAAATTTTCATA
GCCACAGTCTAGACAAGCCTGAATTTCCTGAAGATATCTTAAAGCCAAAA
ATTGCCATACACTGGTTTATCATACATAGTATTAAAGGCAAAATCATTAA
ATTTATTGAAAAAGTATTGAATGGTTCAAATTAAAAAAAAAGTTGATATA
TAATTATCAAATCTATTGTTATGGTTATTTTTGCCATTTAAAACGATTAT
TATCAAAAACTCACAAACAATTTGTATCAAAGAATGGACAAGATCATCAG
AAACAGTATAAGAACAATATCAAAACATTTTTCATAAAAAAGAAGAAAAT
TACAATAATTAAGCAGCAACATCAACATTCTGTTGCAGAATCAACAGTAT
ATAATAACCACATATTACGAGGCATGCTGATATATAAAACCAAGCAATTG
GTATACTTTCTCTTTCTGTTATTATTTGACCCTTGACCTTCATATTCATT
TAGTGACGATTTTACAGTTAATTATAGTATGGAAATCACAACAATCATTT
TTTCAGACAAAACTAGGAAGAAATTGTATTTTGCGAAGAGTATATTGTAG
TAAATTTTGCAGTGTTATTGTCTATTGTGTGGGAATACTGAAAAAGGAAT
TTTTTCATAAGTAAATAAACTACATGCAATTTTGGGAGAGATACCGCTAA
GACGTTCTCCTAAATTTTTCGCATTTGCAAGAATAATTATAGCCTGTTTA
TCAAACACTGTATTTTTCAAAGTATTCAGTTGGCCATTGAGTTTAAAGTC
TCGAGCAAGAAAAAAGTGAAACCTTTAGATTTGTACCACAGTGCTTTCTG
GATATCCCGACTGTAAATTATTTTTTTAAATTGTGATATTGTTTACTTAT
GGTTTACTTTCTGCTTTATCACTTTTTGATAAATAACGAGATTGCTCACG
GGAATTTTTTGACCCGCATTCTGCGCGATCATGTTTAATCGCCCGCGCGT
GTACGCTCTGTGAATTCTGTCTGCTGTATATGGGTACTGTATAGAAGAAA
AAGCTCCTCTCTTCAGTCTTTTGAGAATTTAAGGAGATTGGAGAGTGTCC
TAACCCCACAGACGGAAATTCTAATTTTAAAGGCACTAGCAGGGTTTACA
ACCCGTTTGCTGCAGTCCCAATAAAGACTAAAGATCCTGAAAATATCGAT
GAGTGATCGGCTCCCGTATGTTGGAAATGATCTAAGATCATTTTTCTAAG
AAGTTAATACCTTGACAGGGTAAATAAAATTATACAGGTCATGGCAAATA
AAATTATGTTATATTTAATCATTGTTATTTTCCCCGATTAACATCTTGAG
TGACAGAGTGGATAGGGCGCTGAGCTGTCGTGCATGTTATCGTCAATTTT
GAGAGTTCAAATCATATACGGTGCGTTGAAGTTTGTGTTATTTTGTCAAC
ATTGACCAACCTTTTTCTGGTTTTATGAGCTGTTATTGTGTATTGATATT
TTTGAAAATTGCCGTTATATTTTTAAGAAACAAAAATTTTATAAGACGTG
TCACCTCAGTGCAGTTTGACTCAAAGTACAGTATTTCAAAATGGATCAGG
TTGGTTAGCGGGTGGAGAGTCAAGAGTCAACACTCATGACTTTCCTTTCT
CTTGAAAATCCAGTATTCCAAAACTTTTAACTAAAAAAATGCATAAAAAT
CAACTTTTGTCTTTTTTTATTATCTTACAAACACTTTTTTCGAAACCACA
AGTGAAAAGAAAAGCATCTAAAAATGATTGACAGGTTTAAGAAATGATTG
ACAGGTGCGGGTTTGCTCGCGCGGGTTAGAGATTCCCGTGAGCAATCTCG
TTATTTATCAGCATGTGCTTTATCTTATGATACATTGTGTGTTTTTATGG
TCACTGTATCTAAAATGTTTGCACCTAATTTTAGGCTCGTTATTTTAGAA
AATTGGGTAGAAACTTATAGTTCTTTTTAAAAATCACCTTCCTCTATTCA
GCCACTACTTTAAGGGAACTAATTTTTGCAGTCAAAAAAAAAATTGGAAA
AATTGCATTTCATTGAAATTAATTTTTGCCGTNGCAGTCAAAAAAAAAAT
GGAAAAATTGCATTTCATTGAAACTAATTTTTGCCACTTTGACCTATTTT
GGACCTATTATTCTTTCATTTTCCTAGGGATGGCTAAATTTGTATTTTGC
AGGTTATTTCTGCGGTTTTGCCAAAAAAAAATATGAAAAAAGTGAAAATT
AGTTGCCTTAAGGTGATTAGTGAATTCTCTTCCTCCCATGACAAATGTGT
TTTCTAATTGTGACTAAAGAACAAATTCATTTTAGACAAAACTCCCAACC
ATTCTGAAGGTTGTTGTATAAGAAGAAAGAAAAAGGAAGGATAAGCGTTG
ATTTTTATAGAAATTTCAAGGAAAGGAAATTAAATTTTATTTATGAGTGT
CAACTTGCTTGTGTGGAAAATCATAAAAATCCATGAATCTGAAACATTTT
CCTAGCAAATCTACAAAAACAGAAATTTTAGAAAAAAACAAAAAATTACC
TCCAATTGCAAAGTTCTGAAATTTCTGAGCTTGGTACAGGTAGATCACTC
TGATACGGAATGTAACTGAAAAAGTTGCAACATTTGGCGAATTTAAGTTT
CGCGAAATTTCACATATAGAACTTTCGTAAACTCATATAAAATTTACCTT
TTTTGGTAACGAAAAACTCATTAATCACACAAAAATTTAGCAAACAGTGC
AAGACTGAGTAGGAAAGTTCATTTTTTGAAGAAAAAAAAACTTTTGCGTT
TTTCAGGTTTAATTTCTTACCTGGCAGAAACTTTCGCGAAAAAGGATAAA
AATTGCGAAAAATGCGAAAGTTTCTGCCTGTGAAAGTTTCTGCCTGCGAA
AGTAATCAACCTATCATAAGGCTAAAAAGCACATCAAAACATCAGTCACA
TGTATGAATGAACTATCCCAGATAACTGCCAGTTATTTTTGAGTGTCTTG
TGTTTTCATTTTCCTTTTCTTTAGCTAAATTGAAAGTAGATTTGCTGAGT
CATGATTTTCCATAAATTACATGTACGCATAAAAAATTATCAAAATTTGC
ACTAAGCTTTGGTTAGTGATATACATCGAATTCAAACCAATCAGACTGAA
ACTGCATTGTGGGGAAAAATCTCCTTGTAGGTTAGCTACCTGTACCAAGT
GTTAAACCAGCAGCAAAAATATTATGAACTAGACCATGAACAAACTTTAA
CACTTATTAGTCAAAAATTGGACTTGCAGTCATATTTTGCTAAATGCATC
TTTGCACAAAAAAATCAGAACAAAACTCAAAATGGAATCTTGAAAAAATG
TGAAAAAACTGGTTTTTCTGGCATTTTTAGCGGGGAAATTTTTTTTTAGA
AAAATTAGAATCCTGCCACACTTTATACAAGGAAGTCAACCACAAAGTTA
TTCCATAAAATGTAAAATACAATTTTTACTGACAATCTTTAAAAATCCAT
AGGAAAATTTTGGCAAACGTCATTGTCAAACAAAATTGCCAAATCACTTC
TCAACAAGATTATTGATACCATCTTTCACACAGAAAAGTCTACGTTATTG
AGAAAAAATTTGGCAAAAAAGATTTGCTGTTAAAAACCACTAAATTCTAA
ATTTCTTCATTGGGACTAAATAAACCTTTTCGTAATTGCAATATATATCA
TGTTGAATAATTGAAAACTCCTATGCAGGCCTACTCATTTAAGCAATAAC
ACATTGATGCATAATAAGTATATTCGTCTCTACTGGTTTTGTCTTTTCCA
TCGTTTTGATGCTGGAGTCAGCTTGAATTTCAATATTATTCAACATGACA
TTGTTGCACATTGGCTGATGAAATATGCTTAAAATGTTGATTAATCTTTT
GAAAGTACCTTCAGATATTTTCTTAAAAAGCCTTAAAAATAATTTTACTT
CAATTGGCACTAACTTTGCCAAAGACATGCATCACCCTTGCAAAATTTTA
AGAATTTCTTCCCCTCCAAAATCCCGTCCCATTATTAAGAGATTGGAGAA
TTGAAATTTTTTTACAGCATTTAGCAGCTCTAGGCCAAAGTGGCAAAGTT
TCACTTTTTAGGATTGAGATTCCACAAGCACATTGGCGGTGTTATGTTGT
CAGTCTTAAGTCTTGTATACAGTAGTAAACTAAGAAATATTAGATTGAAA
ATCAAGAATACAAGTTTGACAAAAAAGATTAATTCAAAACAATTAAAATC
TCATTTCTGTTATTATACAAAGCAGGTTTTTAATTCTTAGAATTTTACAG
TATTTTCAAACGTTTACCATTAATACATATGTTGATTTTTCTTCATTTTC
AGGTACTCAGCAAGATTTACTGTTTATATTCCACATCCCAACGCTTGAAG
AGAAGAATGAGACATTGAGAAATTTCTTCGTTTTTTAAATGTTCAGGATA
AAGAAGGAGGAGTAGAAATAGAAACGAAATGAAAACTCTGCACCCCAGGA
AATCACACACAGCAGAACATCTAAAAACATGTAAATAATATAAACCCTTT
CTTATACAAATTTACAAGCTTGAATAACACCAGAAAATTCGAATTCCAAG
CAGTAGTGTCAAACGATTTTGATCGCTCTGCTACCACATTCATTCATCAA
ACAAGAGCTACATGTAAACAACATAAAATAAACGTGTTTTTTGCACAAGA
AACATGTAAACACAGCACGCGACTATGGCTACCATTTTGAACCATACTAA
CAACGATGAAACTCGTCCAATGAGAGCGCGAGAAAAGACATGTTCGTTAC
GTAATCAATTTACAAGATTTTTATAGGAATTATAATCTTATAAAAGTTAT
AAAAATTATTGTGGTCTTGTAAATTTCAAAGTTAAATAATTTTGCGAACG
TTTTAGCTTTTTCAATTTTTTTTTTTTAGTTTATCTGATCCGATTTGCAA
ATCACCAAAGACCTTTTGCATTTCCTTGATTTTTCACTTGCCATTCACGA
AATTCTAAAATTTAAATTTTCTTATAAAAAATGTGTTAAAACTGTGAAAT
AGGTTAAGCAAGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008056-exon-sc0000081-1575043694:695032..695942 | TCONS_00008056-exon-sc0000081-1575043694:695032..695942 | Clytia hemisphaerica | exon |
| TCONS_00008056-exon-sc0000081-1575043694:688929..689640 | TCONS_00008056-exon-sc0000081-1575043694:688929..689640 | Clytia hemisphaerica | exon |
| TCONS_00008056-exon-sc0000081-1510915933:695032..695942 | TCONS_00008056-exon-sc0000081-1510915933:695032..695942 | Clytia hemisphaerica | exon |
| TCONS_00008056-exon-sc0000081-1510915933:688929..689640 | TCONS_00008056-exon-sc0000081-1510915933:688929..689640 | Clytia hemisphaerica | exon |
| TCONS_00008056-exon-sc0000081-1491911889:695032..695942 | TCONS_00008056-exon-sc0000081-1491911889:695032..695942 | Clytia hemisphaerica | exon |
| TCONS_00008056-exon-sc0000081-1491911889:688929..689640 | TCONS_00008056-exon-sc0000081-1491911889:688929..689640 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000081 | supercontig | sc0000081:688929..695942 - |
Blast
The following BLAST results are available for this feature:
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