TCONS_00008323 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008323
Unique NameTCONS_00008323
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1474

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008323 ID=TCONS_00008323|Name=TCONS_00008323|organism=Clytia hemisphaerica|type=transcript|length=1474bp
GGAAATTTCTGTCATATGATAGAGAGATGAATATTGACAACTTCAGTTTT
GCTGATTTAGAATTAAAATACATTACTGTCAGTTTCACCCGAAggatttt
ttgctgatttttttgctgatttacTCAAACAGAGAATAAGCAGTATGGAT
AATGCTCACAGCGCAGATGATCGAGAAGTGAAACCTAACAGCACCACTGG
TAAAATCGATGAAATACAAAAGCTCAAAGCTGAAAATGCGAAACTCAAGG
AGGATTATGAGAAACAAATCAAAACgttgaaattggaaaataaGATTGTT
GTTTTGGAGTTAGAAAAGGAGAACCAGAATCTTAAACACGAGATGGAGTT
AATGCAGATAAGATTTCAACTTGAGAAAGAATCAAAAAGTGATGGAAACC
TTACAGAGTTGAATAAACAAatattagaaattgaaaatgagTACAAAACG
AAACTAGAGAAGAAAGATCAAGAAATGATCCGAAGAGAGACagaatatca
aaagaaaatcaaaactttggaaGACGAATATCAATCGGAAGTTAAATCTT
TGGAAGATCAGTGCGgttcaaaaatgaaaagtttagaaaaaaagcttcaa
GACGCTGAACAACGAAATGAATTAAATCAAGCTATCATTCAAAAACTTCA
GAGTGAGATTGTCTCGTTGAAAACACGTGGAAGTGATGAGTCCAGAAATT
CGTCTGAAAATCAagtggaaaaagaaaatattgcaGCAGAAAGAGTGAAA
ATGTCAGGTGATGCTACAGAGGAAAGACTTCGATTGGGAATAGAAAGATT
TTACTTGAGGAAAACTTCAAGTTTAACTCAAAACTACCAGGTTTGGTATA
ACGATGTTAGCTGTTCATTGGAAAATCAAGCCCCAAGATATGTATCATTT
GATGGAAAAGAgttcatgtttttgaaaatagagTTTGGATATCAATTTAG
TGAAATTGAGATTTTGACACTGAGGAAAGAGATCACAGATGTCGATGATA
ACTTGGACTTAAAGAAGGATATAATCTGCCTCACATGTGTTAATGGTCAA
GAGGTCGAAAACATGAACTTAAAAACAGATACAGAAATCATGTTGCTTCA
TCCAAAAGAATTTTCCAAATGTTTGAATTTGATCAAACATAACAATAGAA
ATAATCAGAATCGCAAATGGACTGAGCGTATTTGGTATGATGGTTATAAT
AAGACAGCTATAATTTTATGTGTTTTGTAAATTAAAGATTATCGTGTTAA
ATCGAATAAATGCCCTCTTCATATAAACGCCCCATCGAACAAACGCCCCT
CCCTCAACTGCCCTAAAGGAAATATATTCGATGAACGCCCCTCCCCTCTA
AGAGGTTAATTTGAAACAAGTAGCTGCAAGAGAAAACTTAAACATGTGTT
AATATTGTATTCTTTAGTATTCAAAATAATTCTGACCCAATCTTACATCT
ATAAAGTGCGATCGGGGATATCCC
Run BLAST on NCBI

protein sequence of TCONS_00008323-protein

>TCONS_00008323-protein ID=TCONS_00008323-protein|Name=TCONS_00008323-protein|organism=Clytia hemisphaerica|type=polypeptide|length=361bp
MDNAHSADDREVKPNSTTGKIDEIQKLKAENAKLKEDYEKQIKTLKLENK
IVVLELEKENQNLKHEMELMQIRFQLEKESKSDGNLTELNKQILEIENEY
KTKLEKKDQEMIRRETEYQKKIKTLEDEYQSEVKSLEDQCGSKMKSLEKK
LQDAEQRNELNQAIIQKLQSEIVSLKTRGSDESRNSSENQVEKENIAAER
VKMSGDATEERLRLGIERFYLRKTSSLTQNYQVWYNDVSCSLENQAPRYV
SFDGKEFMFLKIEFGYQFSEIEILTLRKEITDVDDNLDLKKDIICLTCVN
GQEVENMNLKTDTEIMLLHPKEFSKCLNLIKHNNRNNQNRKWTERIWYDG
YNKTAIILCVL
Run BLAST on NCBI

transcript from alignment at sc0000084:379973..394592-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008323 ID=TCONS_00008323|Name=TCONS_00008323|organism=Clytia hemisphaerica|type=transcript|length=14620bp|location=Sequence derived from alignment at sc0000084:379973..394592- (Clytia hemisphaerica)
GGAAATTTCTGTCATATGATAGAGAGATGAATATTGACAACTTCAGTTTT
GCTGATTTAGAATTAAAATACATTACTGTCAGTTTCACCCGAAGGATTTT
TTGCTGATTTTTTTGCTGATTTACTCAAACAGAGAATAAGCAGTATGGAT
AATGCTCACAGCGCAGATGATCGAGAAGTGAAACCTAACAGCACCACTGG
TAAAATCGATGAAATACAAAAGCTCAAAGCTGAAAATGCGAAACTCAAGG
AGGATTATGAGAAACAAATCAAAACGTTGAAATTGGAAAATAAGATTGTT
GTTTTGGAGTTAGAAAAGGAGAACCAGAATCTTAAACACGAGATGGAGTT
AATGCAGATAAGATTTCAACTTGAGAAAGAATCAAAAAGTGATGGAAACC
TTACAGAGTTGAATAAACAAATATTAGAAATTGAAAATGAGTACAAAACG
AAACTAGAGAAGAAAGATCAAGAAATGATCCGAAGAGAGACAGAATATCA
AAAGAAAATCAAAACTTTAGAAGACGAACATCAATTGAAAGTTAAATCTT
TGGAAGACCAGTACGGTTCAAAAATGAAAAGTTTAGAAGAAAAGCTTCAG
GACGCAGAACAACGAAACGAATTAAATCAAGCTACGATTCTAAAACTTCA
GAGTGAGATTGTCTCGTTGAAAACACGTGGAAGTGATGAGTCCAGAAATT
CGTCTGAAAATCAAGTGGAAAAAGAAAATATTGCAGCAGAAAGAGTGAAA
ATGTCAGGTGATGCTACAGAGGAAAGACTTCGATTGGGAATAGAAAGATT
TTACTTGAGGAAAACTTCAAGTTTAACTCAAAACTACCAGGTTTGGTATA
ACGATGTTAGCTGTTCATTGGAAAATCAAGCCCCAAGATATGTATCATTC
GATGGAAAAGAGTTCATGTTTTTGAAAATAGAGTTTGGATATCAATTTAG
TGAAATTGAGATTTTGACACTGAGGAGGGAGATCACAGAGGTCGATGATA
ACTTGGACTTAATAAAGAAGGATATAATCTGCCTCACATGTATTAATGGT
GAAGAGGTCGAAAACATGAACTTAAAAACAGATACAGAAATCATGTTGCT
TCATCCAAAAGAATTTTCCAAATGTTTGAATTTGATCAAACATAACAATA
GAAATAATCAGAATCGCAAATGGACTGAGCGTATTTGGTATGATGGTTAT
AATAAGACAGCTATAATTTTATGTGTTTTGTAAATTAAAGATTATCGTGT
TAAATCGAATAAATGCCCTCTTCATATAAACGCNTGGATATTAAATGGGC
GTTGCCAAATTCAAAGGGTGTGATTTATACTAAACGTCTATCATGCTAAA
TTTCATTTCAAAATTCAATCGTAATCAGTAATTATCATGAAAATAACGTT
AAATGGACGAAAAATTGACAGGAGAAAAAGGTCGGAGTTCTTCGTCAGCA
GAAAGTGCAACAAGAGCTGTTGATGATTTCTGGACTCCTGATCAAAGGCT
TCTAATTGCTGTCACTCCAGGGACCAACCCTCGAAAGGATAAACTGGAGC
ACAACAATGAAATTGCTGCAGCATTGAGCTATCGAGAAGTTTCCAAATTT
CTGATCGTCGCTAAAGCGCATGTGCGAATGGATAAAACGATCAGTGAAAT
TAAGCAATACACAATACAGTGATCGATTTGTTGAACTTCCAGATGATTTG
GTAGGTGTCATGGTAACCCATATGGACATCCATAAAGAATGGGATGAAAG
CGAAATGAAAAATGTTTTAAATGAGCGATTTGAGATTCCTGTCGTCATCT
TCAGTGGCAGCCATAATATAGCAGATGAAGTAAACAGGAGAATCATCGAT
ACGTGTCAGACCTCATATAGGATAGATGTTGGATGTAGACTTTACAACGA
GTATTTTAGGATTGAAGAGAGTAATATAAAGATCTTGAAAATTACAAATG
AATTTGTAAGAAGATTCAAGCAGATAAGAAAGGGTTTTGTAAAGAAACTA
GCTCTATGCTCTCAATTGGATCGTGCCAATGCTATATTTGAATTTTTAAC
GTTCTTTAAAGAGAAGCAGCTAGAAACAGGGAAGGCAGAGATGATATGCA
ATCTGAAATTGAATTTCAAAGGTGAAAATGGTGATTTACAAAAAGGTTTC
TTGATTAACATGGAAAACCAAGCAAATGCTGTGATGAGTGATTTGAGGAA
AGAAGCTGCGTTTTATGTTTTACCAACTTGAAGCAACTTTGACTTAGGCA
ACTTAGGCCTGGCCTACCTGGCCCCCTGCCACCCTGCCACTTGGACGTCT
TATTGTTTTTCTGTCAGACTGGAGTCGTTTATAATCTGTGCAATAAATAA
TGTTGTTATATAATAATACAATAATCGAAACGGACTAATACAGTTCCTTC
CATTACTTTCTGCTTGTTCTTCTCATGTCTAAAATGGTCATCTAGCATGC
TAGACTATTTGTCGATAAGTTTAAATATAAACTTCAGAAAATGCTGACGT
CATTAGAAAAATTGTAAAAAAGTGTTGATAGCTTTGATAAAAGGGGGGTT
GTAGTGGTTCAAAATACCATTTTCCCGTCAACACTTTTGCTGAATCCCGC
GGAATCCCGAAAATTGAAAAACTAGTAACACCGTCAAATCGGTTTGTAGA
GGTTAAAATAGCGGCATAATGACAAAAAAAGCTAAATACTGTTACCATCT
GATTTTAAAATACCCTTTCCCCGTCTCTTTTTTCGTCAAATCCCGTAATA
CCCGTACAAAAAATCACATCGCTTCTTTTGAGCTATGTTAGACTGGAGTC
GTTTATGCGTGTAATACCGTAAGTATATATGTTATATGATATTATGATTT
ACGGGATTTAGTTTGTATAAACGACTGGGAAGAATCCGGCATTCCGGCCT
TATAGAATCCCCGGCTACTTACGCAGAAACTTGCGTAGCGAGAAAACAAA
GGGTCTTTTTCTAAAAAAAAAGAGTTTATCGGACGGCGGGGTGCTATTCC
GTTAAGAGCACGAAGGGTATAGATTAGATTAAATTAATTCTTGATCAAGC
AACAACACGTATCCTCGTATCATCAGCTTTTTGATGCTTCAATCAGTAAC
GTAAATAAAGCCTGGAGGGACACACGGGACGTACGAGATTAGCATCAACA
AACTCTCAAAAACAAAATCAACTTTTTTTTTGAGCGGGAAAAAATTACAA
TCGAAATAATGACACTTTTCTTTTGTTTGGACAATGGAGAATAATTTCTT
GGGAGAGGAAATTGTTATGTGTACTGATATCTCCTTTTATGTGTTTCAAC
CTTGTTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGATTGTTTTTCTAA
ACCAATCAAATCGATTATGAAATCAAAGCAAACATTGCTTCCGAACAAGA
CCCCTAGATATTTTTCACAAAGGTTTCTAGACGACTATAATTTTTCCCTC
CATTACTTCTTGCTTTATGTCTACTATGTCTGAATTTCTATGCTATGGCT
AATTTCAAAACTCGTTAAAATAAAACAACATAAAATAGGTAATGCAAGAT
GGACCAGCTCAAAGAACAAAATCTCAGTCCAAAGGGCCTTTTCTATTGAA
AATGCCCGATGTGTGTTTACCAACTCTGGAATACTTAATAAGGCGGTTAG
ATCTAACGTTACGAGACTCTCCAAAGACTTCAATCTAATCTAATTTCTTA
AAAAATAATTTGTATGTATAATTGAACAATCTATGAAATAAAGCAATAAT
GTAAACAAAATGATTTTACAGGTCAAATTCATTGACCACACCCAAAATGT
ATTCACGAACTCAAGAGTACTTCATATTGACGTTGGTTTAAATTTAACTG
TATGAAGTTAAGAAAATTTAAAAGCACATGGCTTCAAAGTCATGAACTGT
AAGTGTAAATAAGGTCAAGAAGAACCTGAAAATTCAAATTTTACCAAAAA
TGTTTAGTTTATCGACGTATCATTGTAAACCTCCAAAGATTTCACCCTAA
TCTAATTTTCTCAAAAATAACTTGTATATATAATTAAACAGTCTATAAAA
TAAAGCTAAAATGACCAACATAAAAGGCGAAAATAAAATAGCTAATTCAG
TAAACAAAATAATTTTACCGGTCAAATAATACTCTGCATTATTCACAAAG
TTTACATTGATCGACCATGCCTTAAAATTATTCACGAACTTTGGTGATAC
GGACGTTGTGCTAAAATTTAGTTGCATGAAATTAAGAATTTACCAGTCAA
TCGAAATTCTGCATTTATCCAAAAAATCTACATCGATCGACCACGCCCAA
GAAATATTCACGAACTGAAAAGTGCTTGATGCGGGCGTTGTGTTAAATTT
AGCTGAATTCAGTTAAGAAAGTTTAAAAACAAATGGCTACATGGAATGTA
AATAAGATCAAGAAGAACCGGAAAAATCCAATTTAACAAAATACAAGTCC
TCCAAAAGAAAAATCAACCAAAAATGTTTAGTTTATCAACGTGTTATAAG
AACCTACAAAAAACCCCTAATCTAATTTTCGCAAAAATAACTTGTATATA
TAATTAAACAGTCTATAAAATAAAGCTACAATAACGAAAATGATAGGTGA
AAGTAAGATTACTAATTCAATAAACAAAAGAATTTTACCGGTCAAATAAT
ACTCTGCATTATCTACAATGTCAATATTGATTGACCACGCCCAGAATGTG
TTTACAAACGCTAGAGTTATTAATAACGACATTGACATTAATTGTATGAA
ATTGAGCGACTTTTCGACAAAAGGTTTGACTGTGTAATCATGGATACTGA
ATATAATCAACAGAAATCCAGTTGGGTATAATTTTGGTCGGTGACCGGAT
GAACGTGGTACTAATGATAAGGATCAATCGACGTGCGACAAACACCGGCT
CCCAAACAATTTTAACTGGCTTGCATATTATTTGTTCAGACGTTTCATCT
TTGTTTATACTCACTCGAAAAGGTTGATTCATGAAGCTTACAATATCACT
CTGTTCTATGGTCATTTTCTCTGACCATACATTCTGAGATTGACCAAGGT
ACCAGTTTCTTGTTTTGTAAAACAGTACTACTGGTGGAAATGTAAGGGTC
AGCAACATTTCATTTGGTGTGATTGCTTTTGATCGAAGCCAACAGCAACC
AAAATATAATACAAAAGGAAAGGGAACAATCCAAAAACAAATCACCACAA
AAACCATGATCTGCCATTGTTGGTAACACGCCACTTCAGCTTGATTAAAA
ATCCACAGTCCACCGTCAATTTCAATACAATCTACAGATTGTAAACAAAA
TGTTGCAATGCTAGCATAACCAAGAATTAGAATCTGAACATAGCTAACTT
TCAACCGGTTGATGAATGACGAGATTTTATATTGGTTTTCCTGGTGGTAT
CTGACAAGGTTGACCACGAGAAGTGATACTGGTATTAGAATAATACACGA
AAGAACGATACTTAATCTGAAAAGTTCAATAGCAGCAATACTCTGTTTGG
ATAGGGCACAAATCGATCAGATTGGAAGATTTGATTGAGATTTTAATGTC
GAAAAATGATGAAAGAGTTTCAATAAGATATGGCATGTGATATTCCATTT
TAGCTGAAGAAGTGATTCGTATAATTGAAGCTGTCTGGTAAAAGAAAAAT
GTGATTTTGATAAGACCTGAAATATATGATTGCTGATCAAAGTTAAGATT
GTTGTGTGAGTTTGTCTCATTCACTTCGTTGTCGCTGATCAAGTTATAAG
GAGTATCCGGGAATCTATTTCGAACAGAATCTCCACGATCAATCCTGGTC
AATCTCGCATAGAGTTTATGTAGTTTGTTTTTAATAGCGAGAAGTACATC
TTTGTGGTATAGTAACAATCCGAAAGATAATACGATAACAATTGTAAAAA
CAAACCAAAACCAACTCGCCAAGCATTTTGAACTATCAACACATTTGTTA
TGACTAAATATGCTTATAAAGTCTCCAGGTCTACACCCTCCACACAACCG
CCCTTGACGCCTGTTTGCACATGTGTTATACGAATGACATCTTTTTAAAC
GATCACAACAATAAAAGGGTGGACATATCTTAAATGTCACATATCCAGAG
GAGTTTGAGTAACCCCAATAGTTTCCTCTACTTTTGATACCGTTAATACA
AGAAGCTTGAAAGGGACATTGATAACATGTTGAATTATGAACATGTATTT
TTCCATTGCTATCGTAATTGGCGTATGGTTTATTTAGAGCGTGGTACGAT
GTTCCGTCACATTGGACAAACTTCATTCGAATGTTATTTTGAAAGTGTGA
ATTCGACCAGTCACCAAGAATATAATAGTTAGATTCTAAGCATGAGAAAT
TTGAGTCTGTAATAAAAACAGTATCTACATCGAAAATATTTTTAACGAAA
AAAGCTGTACTGGACCTTTTTTCATTCGTTCCACCGTCACACAATTGTAC
TTTTGTGATGTTTAAAAATCGATTACTGACGCCTTTTAGTGTTAAATATA
TGGAGGTTGGCATCACTGTATAAGGAGTAGTATTGTTTAGAAAAGTACAA
TTGTAAATGGTTATATGTTCTGACTTGATCGTAATACCAGCTGACATATC
ATAGCTGAAAGGTATAACGATATCTTTATCACAGAAGTAATTGTCAAGAA
ATGTTGAATTCAATATTGCAACCCTGTACCCTTCAGAGTAAATCGAACCC
GACTTTGAACTTTTGAATGAAGAATCGTTAACTAAAAGTTCGTTTTTGCC
ACTATCGTAAACATTAGTCACTTGTATTTGATTTAAGTATGTACCGACAG
AATCAAAAGTGCATTTCGAGATTGATATTTTTACAAAATGACACGTTGTA
GTAAATACGAATAAATTCGAACGTTCAAAGCTTGTCCTTGATATGACAAA
ATTTCCTGGTTGTTTCACCCTAATCGTTAAAAACGAATCTGATGAAAATG
CGTTGTCGGTTATTTTGTAGTCTATAGGTTTTCCAAAATAATGGATATTT
CTTGCGTCCATCTCAAGGGATGTTTGTTTTAGAAATGTATTGTTACTACT
TGAGATTCGATCGAATCANTGATGTAATGAAAAGTCATTTATATCCATAG
AAACTTGGCTACTAATTCTATCACGATAAGATTGATCAAAAGTGCATTTC
AAAATTGAGACTTTCACCAAGCCACTTTTACTGCTTGATAGGCTAAAACT
CGATCGTGTGAAGTCGGTCCTTAATATGGTGAAAATAACTCCTGGTCGAT
TAATGAAATACTGAAACAACGAGTCTTGGACTATGTCATCGGTCATGGTG
TAGGGTATAAATTTACTGAAATATTTGGTACTTCTAGTGTTCATTTGAAG
GTTGGATTCCAAAAACTTATTGTCACTTGTTAAAATTTGATCAAATGAAT
ACAAGTGCAAATCTGAGTTCATGAATTGATTACCTTTTAAGGATATTATC
CCTTTAATATATTCTTGGTTTCTTATTTCTATCCAAAAGTTATGGAAATG
ACAATCTTGCATCAACACCTTCATTACAGTTGGTCTTTCTGGTACTAGCT
CCTCGTGTGATCCTTTCGATGGTTTTATTTGGGAAATATGAAATGACAAT
AGATGAGAAATGTTAAGTAAACGAAATCCAATTGAGAGGTCTTGTAGAGA
TACATTCCCTGATGGTGAAAATAACGCACAATCGCTCTCGAACAATACCT
TAGCCATTTCTCCACTACAGTTTAGACTAATATTACCACAATAGCTTGAT
ATTTCCAAAGAATGAGGTATCACAATAGTTTCATTGCGAACGTATTGATA
TTGTGAATCCAGTAAAATGATATCTCCATCCAGTGAAATGTTAATAGCGT
GATTTAAATGAAAGCATGGTTGATGAATTGAACCGCAATTGATCGTGTCT
TTGCTCCTCTTGTCACGTGACACATGAATAGTTCTTTGCTCGATTCCACG
AGATACTAAAAAGTAAGAAATTTAAACATTAACGTTATAATATTTTTGAC
AATATTATTTTTAGGAGTTGCAGCTGGCTCCTTTTTCAAAGTGGTAATGA
TAGTTACAATATAGAGACTTTTTCAAGGTGACTTAAAGCAGAATTTGGTT
TGATTGGAAACTTTTGCTTTGGCTTTCTGCTTTGGCCGGAACGGGATCAA
CCGTTCCCTTCCTCCGCCTCTGCTAAAAGGGCAATAGATATACAGAGAAT
AAGCTCCTGTCTCACAGCCCCGATGAAACCTTTCCCCATATTTCTATCGA
AACCTCAATGAGGATAGAAAATCTTTTGCTTTCAGGTTAAATTTAATTTG
TATGGTTTTAGATGTTTTTCTCATTGAACTATGAATTGGGATGGAACTAA
ATTCAATTTTCCAGTGGGGCTGAAATTGTAGGGTATTTTTTTCCAACTGG
GGACAAAATTTCGGCAAAGTTTTACAGTATGAGTGTATACCCCACTGGCC
CCCACTGGGTCTGTGATATAGGGATGTGACATATGAAAATCCTCTGAAAC
CTCAGACAACCCAACCATTCAAGTCAAGACTGTTAACGTATGATTTTCAG
AAATAAGATAAACTAACCTTCGAAACAAAATGTGAAAATCAAAAACACGT
AAAAAGATAATACAGTACACATTTTATCTGCTCTACATACACTCAGAAAG
TGCAATATTTATCATCTTATAATTCTATACGATAAAGGATGTTTGAAATT
TGATCCGTAGAAAGACAAATAATAACCAAACAAAAATGATTTGCCCCTAC
AAGACCAACTATCCTTGTTTTTTTGATACCGTCAACTGCTCTAACTTGGG
ACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NCGAAAGTTGTTCCGTAGTGGAGCACACGCGAAGGAAGAACAAAGAAGAA
TAATAGTGGCAAAACGATGGAGCGTTTGACGTCAGTTGCGCGACAAGTTA
CACACTCGTTATTTGTTAATCCCATCGATAAAAAAAATTCACTCCATTAA
GAATTAGTGAATAAGATAAAAAAATTCACTCCATTAAGAATTAGTGAATA
AGAATCAAAAACTAAAACAAAGGGTGTGGTGGTAAGCCTACACAACTAAG
AGAGGTCCACCACACCCAAGAAGAACAACAACACTGAAATTCTGATGTGG
TGGTGGTTTTGATTTGTCTCGGGACGAGGAACTGACCGGTCACGCCCTTA
AACATACGGTTGAACATCTCATCACCCTTCTCATGAAACAGACATTCTAC
AAATGGAATATTGGAACCATCAATGTGAGAACTTGCAAAGACGACCTCAA
ACTCGAACGTGTTGTGCAAGAGATCCATAAAGCCAACTTAGAAATCTCTG
CACTTCAAGAAGTAAGAAGACTCAAACAAGGATCAGCTACAGTTAAATGT
GATAATTCGAAATACGAAATCTATTGGTCAGGTCACTCCCTTAAGAGACA
ACATGGAGTTGGTTTTGTCATCAAAGTAGACCCTAATGTCGAAATCGTGC
AAGTTGAATACGTGGATGCTCAGATCATTGTGCTTCAAACCAAGGTATAC
GGATGTCTGCTTAAAGTTATTAATTGCTATGCACCTACAGAAGAGAGTAG
TGACAGTTCAAAAGACTTGTTTTACAGAAATCTTCACAAACAATTCGTCA
ATGTTCCACCAAAATACAAGGTCATTTGTCTTGGAGATTTTAACGCGACA
ACTTCAGCAGCATGGTACAATTCTTCGCTCAGAGAAAACATAATTATGTG
ATAGCCTGATTGTTAATAATAACGGTGGAAGATTCCACGATTTAATACAA
ACTCAACAATTATCAGTCTTGAAAACATGGTTTAACATCCCCGTGTATCC
CAGGTTTTATTTACATTAGTCTAATCTAATTGACTAAGAATACCCTGTTG
TGTTAATAGATGCAAGTTTCCCCCTCAGTGGGGAAACTTATTAAAACAAA
GCATCCTAAACAAAAGATCTGACGTTACAGAATTACACTGCAGTGCAAAT
CTTCAAAACTGTAAGATGCTAAAGCACTGGACTCAACTTCAGACAGGCAC
GGATTTGAAAGGTCGCTTCGCTTCGTTCGCTAAGAGTGAAGTTTTCCTAT
TTGGGTTTTCTTATTTTGCTATAACAATAATTGCATGATTGTGCAAAAAG
TTTTTTTTTAGAAAATAGTTTGCAACATCAAAAAATAGTATTTAACATCA
TAGAATTGTAACACCGTAATCCACACGCAATAATTTAGTCATATTATCTT
ACAATATAACGCTATCAGGGTATCATACATCATATGATATAGTATGTTTT
ATGCACAGCGACTTCTATAATATCTTATACCGGATATNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTACAG
GGTAATATACAAACTGTCGACCATCTACACTGTCGAACAACTGGGCTGTC
GATTATGTGAACGATCACTTGTTCGACGCCCACTTGTTCGACAATAATGT
CGAACAAGTGGGCGTCGAACAAGTGGGTGTCGAACAACTATAGATTGTCG
AACAAGTGGGCGTCGAACAAGTGGGTGTCGAACAACTATAGATTGTCGAT
CAAGTGGGTTGTCGATCAAGTGGGCGCCCATTTATTCGACAACCCACTTG
TTCGACAATTTTACGAATTTGTCGAACAAGTGAATTGTCGAACAAATGGG
TTGTCGAACATGTGACATATCACCTTTTTACCTTTTGAATATTTTGTATT
TCAAGTGTGTTATCTTCGTTTGCAAGAGAATTGGACTCAAATACACCATG
TTTTTATCATGAGGTCACTTACGTAAAATGTATACAGTGTGTCCCAAAAA
AAGTGAACAAAAAAAGTTTATATAAAGGAAAATCCTCAAAAGTAATTATT
TAAACTGTCGACTTAAAATAATTAAAGTAAGATTACAATCCTCTGTTCAA
GCAATAGATATTCAATTCCTAAGATGGTTGAATAGTTTTTGGAGATTGAA
ATAACTATATAATATATAAGTCAAACTATTTTGCATAAGCCATGAAGATT
TTTCTTCATATAAAAATTTGTCCGCTTTCTTGGGACACACTGTACACCGC
ATTACCAGGCGTTTGCAAGCGGTAAATATATTCCTTCAAATCTTAAAAAA
ATCCCAATAGGAATAAAGTCACTTCCTAAAGACGAAAGGCAAAAGTTTTT
TCTGTTTCTCAATGGGTCGGCTAAAGTTTGAAAGTTAAAAATTTAACAAA
AATTTGTCTGAGGATACCAAAAATCCAAATTAGAGTGGATTTTCAAACAT
TGGATCGGGCATGCCCGTCACTTTCAGCAAACCTGCCCGACGAATCAGCT
AAATTTTAGCGCCTTTGTAAATTTTAATCCGTTTTGATTTTAAAATTGCG
TTCCAGGACGACCTCGTTCCCTCCGTATCACGATCAGCTAATGTTCACTA
ACGTCCATCAGTAATGTAAATAAAGCCTGGGATACACGGGGTTGAGTTTG
CCCTCTTCCATTGACATTCTGCTTTATAACCAAATACTTTTATGCTTGAA
ATTCGATCAGTAAAGTCAGCAAACTATTGTAGCAACAGCAAAAAAATTTG
CACGATGAGCAAAAAATATTATCATATCATATCATATTATATCATACTTT
TATCATATGATAGGAGGTGTTTTGACAACTTCAGTTTTACTGGTTTACTC
AAACAGAGAAGAAGCAGTATGGATAATGCTCACAGCGCAGAGGATCGACA
AGTAAAACCTAACAGCGCCACTGGTAAACTCAATGAAATACAAAAGCTCA
AAGCTGAAAATGCGAAACTCAAGGAGGATTATGAGAAACAAATCAAAACG
TTGAAATTGGAAAATAAGATTGTTGTTTTGGAGTTAAAAAAGGAGAACCA
GAATCTTAAACACGAGATGGAGTTAATGCAGATAAGATTTCAACTTGAGA
AAGAATCAAAAAGTGATGGAAACCTTACAGAGTTGAAGAAACAAATATTA
GAAATTGAAAATGAGTACAAAACGAAACTGGAAAAGAAAGACCAAGAAAT
GATCCGAAGAGAGGCAGAACATCAAAAGAAAATCAAAACTTTGGAAGACG
AATATCAATCGGAAGTTAAATCTTTGGAAGATCAGTGCGGTTCAAAAATG
AAAAGTTTAGAAAAAAAGCTTCAAGACGCTGAACAACGAAATGAATTAAA
TCAAGCTATCATTCAAAAACTTCAGAGTGAGATTGTCTCGTTGAAAACAC
GTGGAAGTGATGAGTCCAGAAATTCGTCTGAAAATCAAGTGGAAAAAGAA
AATATTGCAGCAGAAAGAGTGAAAATGTCAGGTGATGCTACAGAGGAAAG
ACTTCGATTGGGAATAGAAAGATTTTACTTGAGGAAAACTTCAAGTTTAA
CTCAAAACTACCAGGTTTGGTATAACGATGTTAGCTGTTCATTGGAAAAT
CAAGCCCCAAGATATGTATCATTTGATGGAAAAGAGTTCATGTTTTTGAA
AATAGAGTTTGGATATCAATTTAGTGAAATTGAGATTTTGACACTGAGGA
AAGAGATCACAGATGTCGATGATAACTTGGACTTAAAGAAGGATATAATC
TGCCTCACATGTGTTAATGGTCAAGAGGTCGAAAATATGAACTTAAAGAA
NTTAATAAAGAAGGATATAATCTGCCTCACATGTATTAATGGTGAAGAGG
TCGAAAACATGAACTTAAAAACAGATACAGAAATCATGTTGCTTCATCCA
AAAGAATTTTCCAAATGTTTGAATTTGATCAAACATAACAATAGAAATAA
TCAGAATCGCAAATGGACTGAGCGTATTTGGTATGATGGTTATAATAAGA
CAGCTATAATTTTATGTGTTTTGTAAATTAAAGATTATCGTGTTAAATCG
AATAAATGCCCTCTTCATATAAACGCCCCATCGAACAAACGCCCCTCCCT
CAACTGCCCTAAAGGAAATATATTCGATGAACGCCCCTCCCCTCTAAGAG
GTTAATTTGAAACAAGTAGCTGCAAGAGAAAACTTAAACATGTGTTAATA
TTGTATTCTTTAGTATTCAAAATAATTCTGACCCAATCTTACATCTATAA
AGTGCGATCGGGGATATCCC

Coding sequence (CDS) from alignment at sc0000084:379973..394592-

>TCONS_00008323 ID=TCONS_00008323|Name=TCONS_00008323|organism=Clytia hemisphaerica|type=CDS|length=3258bp|location=Sequence derived from alignment at sc0000084:379973..394592- (Clytia hemisphaerica)
GTCGAAAACATGAACTTAAAAACAGATACAGAAATCATGTTGCTTCATCC
AAAAGAATTTTCCAAATGTTTGAATTTGATCAAACATAACAATAGAAATA
ATCAGAATCGCAAATGGACTGAGCGTATTTGGTATGATGGTTATAATAAG
ACAGCTATAATTTTATGTGTTTTGTAAATCAAAAGAAAATCAAAACTTTG
GAAGACGAATATCAATCGGAAGTTAAATCTTTGGAAGATCAGTGCGGTTC
AAAAATGAAAAGTTTAGAAAAAAAGCTTCAAGACGCTGAACAACGAAATG
AATTAAATCAAGCTATCATTCAAAAACTTCAGAGTGAGATTGTCTCGTTG
AAAACACGTGGAAGTGATGAGTCCAGAAATTCGTCTGAAAATCAAGTGGA
AAAAGAAAATATTGCAGCAGAAAGAGTGAAAATGTCAGGTGATGCTACAG
AGGAAAGACTTCGATTGGGAATAGAAAGATTTTACTTGAGGAAAACTTCA
AGTTTAACTCAAAACTACCAGGTTTGGTATAACGATGTTAGCTGTTCATT
GGAAAATCAAGCCCCAAGATATGTATCATTTGATGGAAAAGAGTTCATGT
TTTTGAAAATAGAGTTTGGATATCAATTTAGTGAAATTGAGATTTTGACA
CTGAGGAAAGAGATCACAGATGTCGATGATAACTTGGACTTAAAGAAGGA
TATAATCTGCCTCACATGTGTTAATGGTCAAGAGATGGATAATGCTCACA
GCGCAGATGATCGAGAAGTGAAACCTAACAGCACCACTGGTAAAATCGAT
GAAATACAAAAGCTCAAAGCTGAAAATGCGAAACTCAAGGAGGATTATGA
GAAACAAATCAAAACGTTGAAATTGGAAAATAAGATTGTTGTTTTGGAGT
TAGAAAAGGAGAACCAGAATCTTAAACACGAGATGGAGTTAATGCAGATA
AGATTTCAACTTGAGAAAGAATCAAAAAGTGATGGAAACCTTACAGAGTT
GAATAAACAAATATTAGAAATTGAAAATGAGTACAAAACGAAACTAGAGA
AGAAAGATCAAGAAATGATCCGAAGAGAGACAGAATGTCGAAAACATGAA
CTTAAAAACAGATACAGAAATCATGTTGCTTCATCCAAAAGAATTTTCCA
AATGTTTGAATTTGATCAAACATAACAATAGAAATAATCAGAATCGCAAA
TGGACTGAGCGTATTTGGTATGATGGTTATAATAAGACAGCTATAATTTT
ATGTGTTTTGTAAATCAAAAGAAAATCAAAACTTTGGAAGACGAATATCA
ATCGGAAGTTAAATCTTTGGAAGATCAGTGCGGTTCAAAAATGAAAAGTT
TAGAAAAAAAGCTTCAAGACGCTGAACAACGAAATGAATTAAATCAAGCT
ATCATTCAAAAACTTCAGAGTGAGATTGTCTCGTTGAAAACACGTGGAAG
TGATGAGTCCAGAAATTCGTCTGAAAATCAAGTGGAAAAAGAAAATATTG
CAGCAGAAAGAGTGAAAATGTCAGGTGATGCTACAGAGGAAAGACTTCGA
TTGGGAATAGAAAGATTTTACTTGAGGAAAACTTCAAGTTTAACTCAAAA
CTACCAGGTTTGGTATAACGATGTTAGCTGTTCATTGGAAAATCAAGCCC
CAAGATATGTATCATTTGATGGAAAAGAGTTCATGTTTTTGAAAATAGAG
TTTGGATATCAATTTAGTGAAATTGAGATTTTGACACTGAGGAAAGAGAT
CACAGATGTCGATGATAACTTGGACTTAAAGAAGGATATAATCTGCCTCA
CATGTGTTAATGGTCAAGAGATGGATAATGCTCACAGCGCAGATGATCGA
GAAGTGAAACCTAACAGCACCACTGGTAAAATCGATGAAATACAAAAGCT
CAAAGCTGAAAATGCGAAACTCAAGGAGGATTATGAGAAACAAATCAAAA
CGTTGAAATTGGAAAATAAGATTGTTGTTTTGGAGTTAGAAAAGGAGAAC
CAGAATCTTAAACACGAGATGGAGTTAATGCAGATAAGATTTCAACTTGA
GAAAGAATCAAAAAGTGATGGAAACCTTACAGAGTTGAATAAACAAATAT
TAGAAATTGAAAATGAGTACAAAACGAAACTAGAGAAGAAAGATCAAGAA
ATGATCCGAAGAGAGACAGAATGTCGAAAACATGAACTTAAAAACAGATA
CAGAAATCATGTTGCTTCATCCAAAAGAATTTTCCAAATGTTTGAATTTG
ATCAAACATAACAATAGAAATAATCAGAATCGCAAATGGACTGAGCGTAT
TTGGTATGATGGTTATAATAAGACAGCTATAATTTTATGTGTTTTGTAAA
TCAAAAGAAAATCAAAACTTTGGAAGACGAATATCAATCGGAAGTTAAAT
CTTTGGAAGATCAGTGCGGTTCAAAAATGAAAAGTTTAGAAAAAAAGCTT
CAAGACGCTGAACAACGAAATGAATTAAATCAAGCTATCATTCAAAAACT
TCAGAGTGAGATTGTCTCGTTGAAAACACGTGGAAGTGATGAGTCCAGAA
ATTCGTCTGAAAATCAAGTGGAAAAAGAAAATATTGCAGCAGAAAGAGTG
AAAATGTCAGGTGATGCTACAGAGGAAAGACTTCGATTGGGAATAGAAAG
ATTTTACTTGAGGAAAACTTCAAGTTTAACTCAAAACTACCAGGTTTGGT
ATAACGATGTTAGCTGTTCATTGGAAAATCAAGCCCCAAGATATGTATCA
TTTGATGGAAAAGAGTTCATGTTTTTGAAAATAGAGTTTGGATATCAATT
TAGTGAAATTGAGATTTTGACACTGAGGAAAGAGATCACAGATGTCGATG
ATAACTTGGACTTAAAGAAGGATATAATCTGCCTCACATGTGTTAATGGT
CAAGAGATGGATAATGCTCACAGCGCAGATGATCGAGAAGTGAAACCTAA
CAGCACCACTGGTAAAATCGATGAAATACAAAAGCTCAAAGCTGAAAATG
CGAAACTCAAGGAGGATTATGAGAAACAAATCAAAACGTTGAAATTGGAA
AATAAGATTGTTGTTTTGGAGTTAGAAAAGGAGAACCAGAATCTTAAACA
CGAGATGGAGTTAATGCAGATAAGATTTCAACTTGAGAAAGAATCAAAAA
GTGATGGAAACCTTACAGAGTTGAATAAACAAATATTAGAAATTGAAAAT
GAGTACAAAACGAAACTAGAGAAGAAAGATCAAGAAATGATCCGAAGAGA
GACAGAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004672XLOC_004672Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008323-proteinTCONS_00008323-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008323-exon-sc0000084-1575043694:394097..394592TCONS_00008323-exon-sc0000084-1575043694:394097..394592Clytia hemisphaericaexon
TCONS_00008323-exon-sc0000084-1575043694:380466..381022TCONS_00008323-exon-sc0000084-1575043694:380466..381022Clytia hemisphaericaexon
TCONS_00008323-exon-sc0000084-1575043694:379973..380393TCONS_00008323-exon-sc0000084-1575043694:379973..380393Clytia hemisphaericaexon
TCONS_00008323-exon-sc0000084-1510915933:394097..394592TCONS_00008323-exon-sc0000084-1510915933:394097..394592Clytia hemisphaericaexon
TCONS_00008323-exon-sc0000084-1510915933:380466..381022TCONS_00008323-exon-sc0000084-1510915933:380466..381022Clytia hemisphaericaexon
TCONS_00008323-exon-sc0000084-1510915933:379973..380393TCONS_00008323-exon-sc0000084-1510915933:379973..380393Clytia hemisphaericaexon
TCONS_00008323-exon-sc0000084-1491911889:394097..394592TCONS_00008323-exon-sc0000084-1491911889:394097..394592Clytia hemisphaericaexon
TCONS_00008323-exon-sc0000084-1491911889:380466..381022TCONS_00008323-exon-sc0000084-1491911889:380466..381022Clytia hemisphaericaexon
TCONS_00008323-exon-sc0000084-1491911889:379973..380393TCONS_00008323-exon-sc0000084-1491911889:379973..380393Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000084supercontigsc0000084:379973..394592 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.376282	0.211073	0.583731	0.427251	0.814536	0.41625	0.246862	0.223837	1.31996	1.31482	2.25507	1.23874	1.36624	0.0910026	0.375145	0	2.36713	0.744185	0	1.08059	0.573123	1.36968	0	0	2.03235e-07	0.696121
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008323 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top