TCONS_00008527 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008527
Unique NameTCONS_00008527
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1545

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008527 ID=TCONS_00008527|Name=TCONS_00008527|organism=Clytia hemisphaerica|type=transcript|length=1545bp
tttttatggAAGTTCCATCATGCTCAGTTTTGTTAAGATATTGGTATTTT
CTCTCTCCATCCTGTTGTTCAGATACGTTGATGTTTTTGACATCCTTTCC
AAGTTCGAAGATTTAGATGATATACCAGCCCCGTTGAGATTTCACCAACC
TAATGTCACTATTGAAGCAAGCCTACCGGATAATATTACAACAGATCCTA
TCCTTGGTATTGTTGTTCCAATATTCGTTCCATTCCTCTCCATCCATGAA
TATTGGAAAGTATTGAAAGATTCTGAATATGCATTATTGATGGCTGGCAA
ACAAAGTCGTTGTCCAGAACCAGCTTGGAATAGCAATGTTGACGAAAGAA
ATCCTGGTGTTGTTCGAACTATTCGTTTCCCGGCGAAAGAAATCACCAAG
TTTCGTGTCTTTGAAACCGAAGGTGATAAAGTCAAAATGCTGATGCATGC
AACTTTTGAGGACTACGAAACGATTGGTTACAATTTGACAGCAGATCCTA
CATCCAACTTCACAGAATGGAATGATACCTTAAAAGCGATCAATGAAGGC
AGCGTTTACAATGTCTCTTTTCGCACAGTTATAAAACCTGATGACACAAC
AATAACATGCCCCACAACTGAGATGTTCCCCATCCcTCGAGATTGGTGTG
ACCACGCGCAAATTTTGTTTTCTGGAAGCCTTATTCAAGCAACTATCGTC
AACACGACAAaCCAGTGTCTTATTGAATTCAAAGAACAGATTCGACATTA
TCTTGACATTTGGAGATCGAAAGAAACACCAAAAACGACTGGTCAACGTT
GTGTGGTACCAGATAAAATGGACCTCGATTATGCTACCGAATATTTAGGA
ACGGAATTGGCAACGATGTATCCATACCCTGGTTATTTCAAATGCCACGC
AGACCACAATGGAGCAAACTCGAAAGTTCCACCATGCTTCGATGAACGTT
TAAACAAAATTTCGTACAAAGAAAATGGAGAAGCTATTTTGAAATCCATG
GTTGTGGGGAGAGGTGACTTTGTTGAAATCAATATGACGATGGAATTCTC
GAAATGGACCGGCGACTTTGCGACATACACGACCCAGACGTTCCGCGATT
GTGCATACAACATTCCGAACACGTATCTTGAAATGACCATCTACATCAAA
GACATCATTATTCCTCCAGAGTTTGGGATTCCATCATGGATTGTTCCGTT
TGGTATTGTCATTGCCGTTGCCTTTGGTGTCCTTCTCATTGCATGTATTT
ACCTCGCAATATTCAGAACAAAGAAAGGTTTCAACattgagttatggaga
ttccATCGTGCACAAAAAGACAGGGAGTTGAAGAAAAAGATGGATGAACG
AAAACAGAAAAGTCCAAGTAAACAAGAATACATAAATGGTGCTTATGAAG
AATTCTAAATCGTGTATTGTTAtgtttccgccattatggaaacaaacctt
cgatttgcgtaagggatacaccttttcgactatagccgccaattgccgca
caGGTATCTTTTGTCCGTtctatcccactaaaaccgtcccagtcc
Run BLAST on NCBI

protein sequence of TCONS_00008527-protein

>TCONS_00008527-protein ID=TCONS_00008527-protein|Name=TCONS_00008527-protein|organism=Clytia hemisphaerica|type=polypeptide|length=468bp
FYGSSIMLSFVKILVFSLSILLFRYVDVFDILSKFEDLDDIPAPLRFHQP
NVTIEASLPDNITTDPILGIVVPIFVPFLSIHEYWKVLKDSEYALLMAGK
QSRCPEPAWNSNVDERNPGVVRTIRFPAKEITKFRVFETEGDKVKMLMHA
TFEDYETIGYNLTADPTSNFTEWNDTLKAINEGSVYNVSFRTVIKPDDTT
ITCPTTEMFPIPRDWCDHAQILFSGSLIQATIVNTTNQCLIEFKEQIRHY
LDIWRSKETPKTTGQRCVVPDKMDLDYATEYLGTELATMYPYPGYFKCHA
DHNGANSKVPPCFDERLNKISYKENGEAILKSMVVGRGDFVEINMTMEFS
KWTGDFATYTTQTFRDCAYNIPNTYLEMTIYIKDIIIPPEFGIPSWIVPF
GIVIAVAFGVLLIACIYLAIFRTKKGFNIELWRFHRAQKDRELKKKMDER
KQKSPSKQEYINGAYEEF
Run BLAST on NCBI

transcript from alignment at sc0000086:25613..41400+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008527 ID=TCONS_00008527|Name=TCONS_00008527|organism=Clytia hemisphaerica|type=transcript|length=15788bp|location=Sequence derived from alignment at sc0000086:25613..41400+ (Clytia hemisphaerica)
tttttatggAAGTTCCATCATGCTCAGTTTTGTTAAGGTAAAtactttct
tctcttttctGTTTACTTTAAGAAAATAGATTGAGCTATtctattttata
tccatacagggagGTCAAACATTTCTGGGGGGTAATTCGATCAGAATTTC
TAGAGGGTCTTTTTTCGTTTATTCAGGGATAAataattattctaaaattt
ccagggggtaaaagactaaTTTTAGTTCATCTACCGTCACTTTAAGGTAT
AAAAATGCTACAATTACCTTTAGAAAATAATTACCTTTAGAattgacttt
tttgctttttccagCTCACATTAGGTAAGGAGTGCTGTGatatatttttc
ctcttttctagATATTGGTATTTTCTCTCTCCATCCTGTTGTTCAGATAC
GTTGATGTTTTTGACATCCTTTCCAAGTTCGAAGATTTAGATGATATACC
AGCCCCGTTGAGATTTCACCAACCTAATGTCACTATTGAAGGTAGTTttt
atcaatcattttttatataaacacATTgacaagagaaaaataaaatttcc
aagccaaaaaaaaattaagcttTGACCCAAAGAATCCAAAATcagttact
tccttttgtcagaaatGGGCAGACCTTCGGGCCTTCCCTTCACAACAGGA
GTGATTTTCATTGAAATCAATGTCAATGTCGTACCCATCACTTTCTTTAT
TTTGCTGGTGAACTTTTTACAATGGTGAGAgttatcagaatcataaaaaa
agaaagaaagttggCGATAATTTCCATAATCAGTCAATCTTGAAATTATC
TCGTCTATCATTGATCCTATTCTTACAAAAGTGGGGTAATCCCAAATTCA
GTTTGGGTAAAGGACACAATATATAAACGTATATCCTACCATTTGTTTGC
ACATCATTTTTAAACATActttcgggtacctaatagccgccccccccccc
cNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNccccccccccgcttattaatttttgagaaaatgtttttgaaagttcc
ctcttttgtcctaattctgctgtattagcctccttttcaaaaatttttca
cccaggacattttcaTTCCAACCCCGCTTATtatgttttgagattttttc
caaccccccccccacttattcAGCACACGATGAGCGCCTCCTTCTCTTTA
TCATGGAAAGTAAAGAGTATctttaaaaagtatttatttagtTTCTCTAA
CTTGAGGTCATTTTAACATGAAAAGTATGACCATAGTGCATTGGTAGAGC
ATCCTGCTAAGGTTCGCAAGTCAtacgggtcataccaaagattcttaGAA
TGGTACTTGACTTGATGCCTCTCagtttgatgctcagcaattaagagaaa
gaTCAAGGGTTAGTGGatcaatccagggagaaagagtggtggccctcccc
taccttcgggtagatagctatcgaaagaggagccttcgggtcgcctccga
ctgtggtCGCAGACTAACTTACTACTGCTGACATGAAAATCCCTTTAATC
GATAGTTCTCAACttttctaattttaattttctGAAATATACAATTTACT
GCTGTATAATGATAAACGATATTCTTCTTATTCCTTTAGCAAGCCTACCG
GATAATATTACAACAGATCCTATGTAAGTGATTTTTGAATACATATGAAG
AGTTTTATAATGTCCCCTCTAAACTCTTTGTAAGCaatagttctatttat
actgagacgattaatttgtctgatacgagcaatttagaaaatgagcatta
tggaggagtgtacttttcattcatgtttcaataaataggatctcctccac
agatcacattttaaaaactactcgtctcagacgatttttcaGTCTCAGTT
CCATCAAAGAGTGCTCGATGATCGGAACAATAAAATCGATATCCCCATTT
ATGATTTCAATAGGGATTTTTATCCCTACTGAGAAAAAGGTTCCACCAGG
GCTGTGGAGACAGGGGTGATTTGATATTTGTGTGGGGGAGATCCTTGTCT
GAGAAACATTGCAGGGTACAAATTTTATGCAACCTGTACTGTAATGCTTT
GAATCAGGCCCGGCGGAAAACCGTAAAAGTtaggaggctgaaggctcaaa
tgagatgaaattcgctagaaatttgagaaaaaaaaatctaatttgctcaa
aagtgggaaGGCTCAAGTCTACCCcgcttccaccgggcctgtgAATCGAT
GTATCAAtgaaacattacatcatggataTGGAGAATTTATGGTGGCTATC
TAATTTCCTATATTTCATAGCCTTGGTATTGTTGTTCCAATATTCGTTCC
ATTCCTCTCCATCCATGAATATTGGAAAGTATTGAAAGATTCTGAATATG
CATTATTGATGGCTGGCAAACAAAGTCGTTGTCCAGAACCAGCTTGGAAT
AGCAATGTTGACGAAAGAAATCCTGGTGTTGTTCGAACTATTCGTTTCCC
GGCGAAAGAAATCACCAAGTTTCGTGTCTTGTATGTTCCTATCTATTTAA
TTTTCAGTACAAAcactcaaattttattttttttaaacttgaagtTTGTA
TACTATACAATCATCCACTGTGTATATCTTATCGGCACtctttacgccgg
cccttattggcgttatttttaggctcttggcgtaataagggccggtgtta
aaaagactggtgtaaaaagggccaaaattttgcaaattttacttaaaagt
agcgttaactttttatcattatttctcaatttaaaagattttaggtatga
ttcgaagacaAAAACTAttcattgttttactccatatctgaaacttcaca
aaaatcagtgattctcaatggaattttcaacagtttactattgaaaatga
tattttaatgtaaatttaaGCATAAGCCATTCTTACACATTTTGGCGTTA
TTagcggccctaattggcgtaagcccaaaatcaggctgtggcgtaataag
ggccggcgtaaaacgggccggcgttaaattagggccggtgtaaaaagggc
cgataaggtaaaatgaacaaagaaaatgaccaaatgaacaagtttcaatt
tttttgaaaaattacaaaaatcacAATAAGAAATATTGCATACAAACTAT
ATTTTGATCGAATATACTACTGGTAAGTTCCCCTAGAACACAACCGGCAC
ATAACatcgtttcaacgtttttctaatattcacaacgtacatataacgtt
agatgaacgttgaaacaacgttgtgtgtcagctagAAATTCGTGAATTGT
AAGTAATTAAGTGAGTAAACAGTTTTGACTTTGATTTATGAGAATTTATA
TGAACGCTATCTAAAGGACCACTAAAGCAACACTATCTTATTTATGCACT
GTGGTCCTCATGCTTTAGGTATGTGGCCTCTATGCCCTTATTGGGGGgag
ggtttgtaggggttcgaaataccgttttcccgttaaaatatttgctgaat
cccggaatcccgaaaattgaaaaaataataacaccgtcacaccggtttgt
acaggttcaaatcctggcataatgacaaaaaataaggccaaataccgtca
ccgtctgaatttaaaataccgttttcccgtttttttccgtcaaatcccgt
aataccgtactaaaaaagggtcaatcccgtcacaccgtaaaagtacaaac
cccccttaTTTTTTTGGGTAGGTTTAGTCTCTCTCTATCTAAAGGGGAAA
AGAGGTGAAAACTCTGTATCTTAAGCCGTCTCTGTCCACCAATTATTGtt
tgaagattttcaaattcaacgcTAATAGATAAATTAGACACATGATTCAT
GTATATTAATgtatattttaaaagttatcttccattaaaaaactaaaagg
TACATCACTCAAAGTTCCGTGCTTACACACTAATCATACGTACCTAGTTT
TTTAatggaagataacttttaaaacatTGATACATGGCTCTGGTTCTTAA
CTAATAGAGCCCTCTCATTGATTTACCACCCTTGTTTTAAATTAATGTAT
ATCATAATATATTCTTTCTTCCAGTGAAACCGAAGGTGATAAAGTCAAAA
TGCTGATGCATGCAACTTTTGAGGACTACGAAACGATTGGTTACAATTTG
ACAGCAGATCCTACATCCAACTTCACAGAATGGAATGATACCTTAAAAGC
GATCAATGAAGGCAGCGTTTACAATGTCTCTTTTCGCACAGTTATAAAAC
CTGATGACACAACAATAACATGCCCCACAACTGAGATGTTCCCCATCCGT
AAGctggtttttcaaatttttgaccaagtaacccagctggcacacaacgt
tgtttcaaacgttagatgaatgttaaaacaacgttgtgtgacaGCTGGGA
AGACCACATCCACAtattactgttccgtttcgctccggtagGATTtttgt
tacggatcgagtgtgttcatattggtttcggatcgagtgtgttcatattg
ttCTCGGAACGTTTCAGAGGCAGAGTGCAGTTCCGTTCTGATggaaaaag
tggagcgaaaccgtttgaTCTGTTAtactttgtaacgtcttcttttttga
cctttttgaattttgacgttcatAATTGCTTCGGAACCGTTCCGTTCCAC
TTTTTTATTGGAGCGGAAGTGCTCCTTTTTCTTGTTccaaaacgttccga
aaccaatatgaacacgctcgatccgtaacgaaaatcagaCCGGAGcaaaa
cggaacagtaacgttgtgaacatggtctaagacCACGTCCATACGTGggg
gttccgtttcgctccaaaatgaaatgaagcaaaattcaagttttacatca
cttctaaccaatagaatagtttcttttcttttcggAGCGAAAtggaaccg
tcacgtgcgagCATTGTCTAACAGTCTACAAAGCTCTTCTTTCTCAACGA
GGTGCAAAAAGaggtaggcttctgctcatcctctagcgaaaaaagtttct
tatagggagtatatctatagaggtctgcgattcagactaaaaaAGAGGCT
TTCCCGTTTTCAAACTCCACAGAAttattatttgaaaattaaCTAGTCCT
AGTCCTCATTAATAAAACGTGTATGCGTGTATAAAAAGTGTGAAATAgtt
gaatttcactttttcagcTCGAGATTGGTGTGACCACGCGCAAATTTTGT
TTTCTGGAAGCCTTATTCAAGCAACTATCGTCAACACGACAAGTAAGTTA
AACTTTTCACATTTAAGCATTAACCCGGTTGGGAGCCCTTCCGCCGTTAG
AAAAAAGGAGCAGTCAAAGATTgtctttgaagaagaaaaatcctATAATA
cttatattatattttgatgggggattggcggccgcccacactaaagctct
aaaggagcaaGGCAATTTCCTATCCGAGAAGATGTACCGCATCCTCGGTC
AAATTCAGCTACTTTTGCATGTAAGCCAAGCCTCCCGCTGCACGACCCTT
GACGCGGTCTTCCATTAGCCAAACCTTTCAGATAATGAACATTTACTTGA
GTTTGAAACTTTAGCATGTCGGATGGAAATTACTGTATCTGGTTGTCAGA
TAACTAAAAACCTCAGTCTTATACTTTATTCGagtattttctgttttttt
ataaaagaacgaCTCTTACAAGTTGCCTACTTTATCAGTGTCAAGTTTCA
AGGGATTGAACCTTTGCTTGTAGCCTGGTGAACCAAGCAACTTATTCTCA
GTGTAATAAAAATGAAACCGCATGCGTACAATATCCGTAAATCATATAGC
GCATCGTAGCTTTAAAATCATTGTTGATGTTTGAATTTTAATGTTTGCAT
TGAAAACTTCGGTTTTATTATGATTCTTGCTGATATAAGTATTCGTTTGG
TTgtaacttaagggctctgaccatagtgaattcttcataattgccgtgtt
taaaatgtgttttctgactgatgtaaccaacaaaactatggcatgttata
cattttctgttagacaaactattcctgaatatNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNaaaaaggttaattacccattaaaacttagcactttt
tataaaagaaggtgatgcaacatattattaacgtctttttaaagttcata
acgtcatttctgcAATTAATTTCCTAATTACTctgaagggatttgattaa
aaagcaatttataaaggtaattctttgttgaaagtgttaaagaacctaaa
acataacttttgttttcaaatactaaaatcaattttccgactatggtcag
agcccttaagttttTACAAAGGAATTCAATCAAATGTGACTGATTATGTC
TTTTCTAATTGTTTAGAGAATACTCAACTTTCTTTCTAGCTTTTCTTCAC
ACCacacaatgttttgattttaatgcgCCATTTTTAAAGGGATTTTTTTC
GCATAATTTATCCTAATTATGTTTGATACGTCATCATTCGCGCGAGTTTC
AAATTTTCGTTATCAACTGTAAACTGGAGGGTGAACTAAGCTacttattc
agtcacaactttaACCATCATATTTTTACCAAGTGACTGAATGGTAGCTT
AGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCTCA
GTGTAATAAAAATGAAACCGCATGCGTACAATATCCGTAAATCATATAGC
GCATCGTAGCTTTAAAATCATTGTTGATGTTTGAATTTTAATGTTTGCAT
TGAAAACTTCGGTTTTATTATGATTCTTGCTGATATAAGTATTCGTTTGG
TTgtaacttaagggctctgaccatagtgaattcttcataattgccgtgtt
taaaatgtgttttctgactgatgtaaccaacaaaactatggcatgttata
cattttcttttagacaaactattcttgaatctgaaaattttaaaattgca
ttgaaaaaatttgatgaagaagaaaatgaagacttttgcgaggaagagta
tttcaactttgaagagcttagtttcggcgaagaaaaaacattttgaNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNacaatgttttgattttaatgcgCC
ATTTTTAAAGGGATTTTTTTCGCATAATTTATCCTAATTATGTTTGATAC
GTCATCATTCGCGCGAGTTTCAAATTTTCGTTATCAACTGTAAACTGGAG
GGTGAACTAAGCTacttattcagtcacaactttaACCATCATATTTTTAC
AAAGTGACTGAATggtagcttagatttctaggctacttTGCTTGACCCTG
TAAATATACAATTTACTTGTACCTTCAACTTTTTAGCAGATTCTACGCTA
AAGAATACCATACTTAAAACATCCTCTTTCCTCTCTTCTTTTTCCATTGG
TACTCGTAAAAAGATTAAAagatttttgctttgttttcgaTGGGCTGGCG
AACGAAAAATTAACTTCAGCGAATATTCTAAATTCTATAGGCCCGTGAAT
TCTTAGCAAGCCAAGTGTATGATTAGGGTCAAAATGTAATTGAATTTTTA
GATCAGTGAACTGTAATTCTTTTCGTGACTTGGACTGGCGAAATTCGCTG
TTCGCCGGGCCGAAATAAAACCCCTGCTTTGGTTTTTACTTGAGGTTGCA
GGAAAAACTATCATTAAGCCAGTGCCAGTCTATCTAGATGAAACTaaaca
aaaaatcgaaatagaaagattttcaaatagtgatcccaaatttgaattta
tatTATTCTAAATGGCAATTCCGATTCTTAGACAGGTCGTTGTCCAAAAT
gataaatacatttttttaagCAGCCAAGTTGCAAAGGTTCAAGGCCAAAT
TAGCTGCTTGTTTcactatcaaaacaaaaagcttTTTAGACAATCTATCT
ATGGCAAACGATATCCTGGATGAAGAACTATGATGGTATGATATAAGGGA
TGGTGAAAGCAATATATGAGTTGAAATGCTTAGCAACTCAATGTTTTGGG
CTGACCAGAAACTTAGAGTTccttttaaaaagataaatgtaGTCAACCGC
AGAATTACTTTCGAAGATAGTTTAAGGGGGTTTgtctattttttataata
gGTCCGTGTCTAGATAACCAACTCAACTTTTTCTCAAGTAGCACACCAGA
CTTTGCATTTTTTACAACTGTCCACTTTTCATCCCTCTCCTGTTTACCCT
GTTtacccagctagcacacaacgttgacCTCTGTgcttctatttttagta
acagagagagggcaaatcccggcttttttagggtgtttccgctagaaaaa
tgacttacgcatatcaagaattagaTTGATATAGATTACCCGTCTGCTTT
CAGGGGATTTGGTGTCTTGTGGGATAATTCTCCCCATGTCATCAAAATCC
ATGAAAGTATCATAgtatttatctatttttttattatagaCCAGTGTCTT
ATTGAATTCAAAGAACAGATTCGACATTATCTTGACATTTGGAGATCGAA
AGAAACACCAAAAACGACTGGTCAACGTTGTGTGGTACCAGATAAAATGG
ACCTCGATTATGCTACCGAATATTTAGGAACGGTAAGGCGAAATAAAAAC
AACATGCTTTTAggggcagaaactttcacgatttttgcccattttcgcga
aagtttctgccaatTAAGAAATTACACGAGAAATTTGCGAAAGTTTTTTC
AGTGAAAAGTATACTTCTTTTGCTGTTTTATACCCAGTTTTCAGTTTATA
CacatttttatcactttttgtcTGCAAATGAAATAACAttctaaaattcg
cgaaagttatatCTGCTGAATTCGTTCCAAAAGTAAAATTCGGGAAAAAA
TTCGTGATATCTGAATTAAGCAATGTGTGTTCAAAATTACTACCGCTATC
TTTTCCTTACGATactagaacaaactatataagaacataaggtttcgatg
gcaaAAGCCTTTGACTTGAAAGTTATTGATCATCaatatatattattttg
ttaCAGGAATTGGCAACGATGTATCCATACCCTGGTTATTTCAAATGCCA
CGCAGACCACAATGGAGCAAACTCGAAAGTTCCACCATGCTTCGATGAAC
GTTTAAACAAAGTATGAATCttattcgtgatattcatgacgtaatgtttt
atacaaaAGCACCCCTAAAAGACCGGATGTTGGCCagtaattttgaattc
aaacacTGAAATTAGTGGCAAACGCTCTGGATATTTTGGCTTCTTCTGCA
TAAAACagactctgtaccagagtgtatctcatgTGTAACGTTCGTAgtaa
aattcccgtacggaaaccgattttttgacgtcacttttaacttccGAAGC
TCCATCCTGCAGTatcaaaaaaatcgaatttgcgtcaaagcacttgaaag
gcttctatttttcaaaaatcggcaAAGCGGAACTGTGatgaaaaatcgat
gaaaaGTCCCGGTTTtcagtgaggtgctcgctatagATATGTACAGACTA
CATAAAAAAATACGTTATGAAAAGTGTTTACTCATCTTTGTTACCATGTA
GAAACCATGCAAGTGTAAATAGACTAATTCTCTTGAGAATGGTTTCTTCA
TGGCATCAAAAAAGGCGCACACTTAAAACGAATGGGCTCTTTAGTCTGTC
TTTCTGAAGATCCAAACGAAACAGTCACGTCCCTCCGATTCATTAGAACT
TTGCATTTTTATCATNAACGAAACAGTCACGCCCCTCCGATTCATTAGAA
CTTTGCATTTTTATCATCCTAATATATAGACTTTTTCTTCTGGAATTCCA
TAACTTCAGCTAACTTTTTATTTCGCTTTTAGATTTCGTACAAAGAAAAT
GGAGAAGCTATTTTGAAATCCATGGTTGTGGGGAGGTAAGCAATCAGAAG
GAATATTCAAAGACTTCCTCCGTCCGTCCGTTCTGTTTGTCTCAAGTCTG
TTTAATCGAGGACATGTAAAAGTGTAGGCTGTAGGTTACTAATTGCTAGA
CCATTGATCTTACTGTATACTTGAGTCGTTTGTAATTCGTGTAATTACAT
GACTGATCTTATTTAGGTTGCGTGCCATtatttttccaggggggggggga
ttttttttgggggggggggattttttttgggggggggggattttttttgg
gggggggggattttttttggggggggggggggtattatTTTGTAATACCC
TGCTTGGTATTTTCAATACCCTGGCTCCCGCCAAAAATCTCTGATACGCC
CGCTGATAAGGCTATGTTAGCATACTCTTCTTGCATTTTCGTACAtatct
tcagtttttttgtttttataaatattctTTCCTTGATCTAAACTTTTCCG
GCATCCCACCACAAACAAGACGCAGTTTACAacaaaaactaaacaaaaac
gGTGGAACCATTCAAGAGAAAATTAAGATTCTACACtgcatttttcttca
tttttattaatAATGGTGAAGTACAATCATGAAACTACTAAACTTTATTG
TTACATTACTATCTTAGAGGTGACTTTGTTGAAATCAATATGACGATGGA
ATTCTCGAAATGGACCGGCGACTTTGCGACATACACGACCCAGACGTTCC
GCGATTGTGCATACAACATTCCGAACACGTATCTTGAAATGACCATCTAC
ATCAAAGACATCATTATTCCTCCAGGTATCGACCTTGtcatcaatacacc
ttttcgaccgtagtcacgtggtcaggcgcgtgccacttaattattaaatt
atccccctaaactcgatccaatccttttttgacacattttacGACTGGGA
CGGGTTTAGTGggataaaacggacaaaaaaatgcccacaCGGCAACTGGC
GGCTAcagttgaaaaggtgtattatttcACGAacaacgactgcctcgttt
tcaaacaattaCTAATTTTGTCTCAAGAGACTTTAGATAACACAGTTTTT
GATAGATCAGTAGAGCcgagttttgataaatttcctTATAAAACTCAATT
ACCTATAGCAATCTATTCAAAACGAGACTGTAGATGTTGACAAAGTAGTT
TGACCTATTGATAATCTTACATTTCCAActacttttaatttttcagaatt
ttgtaAGCCTTAGAGAGACTTAACGTTAAAATACTGCCACCCTTATCGTC
AGCACATACcgagcacccatttttgcctaagtaaccctCCCCGCGGGATT
TTCACTCCTAAGCAGACCTAAACATTTCTAGATCTCTATATATAGTCTTT
ATGTGGATTATTTGTGATATTCTATGAAAACATTACCTGTATTCTGGTAT
TTTGTACCCTGGAAAGCCCCAATTTCagcttttcttctttctttttttat
ctgtaGAGTTTGGGATTCCATCATGGATTGTTCCGTTTGGTATTGTCATT
GCCGTTGCCTTTGGTGTCCTTCTCATTGCATGTATTTACCTCGCAATATT
CAGAACAAAGAAAGGTTTGTTGCTGTCAAATTTAAGTTCGCTCAACAATC
AAAAATGCCAGAATAACAAATATTTAGATAATATTGTAGACTGCTGAcat
ccatagatttataaagccagAAGGGCTAGATGTAGTGCTTTAAGCTcctc
caagcaaaaaaaaaagtgaatatcatAAAAGATaatgctgctattgtttt
cgaaaacccgcgaagcttctgattggtcaagcgctggaattctattgtaa
tatcacgtgacttaggtaggactTCCTACGTAACCTCGgcacacaaaaaa
acaaaaaaaacaaaaaacctcggcacacttttcagcaaaagcacgatatc
tagcccttcggcctTTACAAATCTATGCTGACATCTACTAACGGATTCGT
GTTCCTTTACTAATACCTGGGGTATTTAAAAGATATAggtaataaaaaaa
agagtgcacactNaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaattcacg
atTTCAGCAAAAGCccgatatctagcccttcggcctTTACAAATCTATGC
TGACATTTACTAACGGATTCGTGTTCCTTTACTAATACCTGGGGTATTTA
AAAGATATAGGTAACagaaaaagagtgcacacttatcgtgaacaaaCTTT
AACAATCTTAAAAAGCATTACCAGCGATAGTTAAAAAGATAATCTAAATT
CAATTTATTATCTCCCTAAGGTTTCAACattgagttatggagattccATC
GTGCACAAAAAGACAGGGAGTTGAAGAAAAAGATGGATGAACGAAAACAG
AAAAGTCCAAGTAAACAAGAATACATAAATGGTGCTTATGAAGAATTCTA
AATCGTGTATTGTTAtgtttccgccattatggaaacaaaccttcgatttg
cgtaagggatacaccttttcgactatagccgccaattgccgcacaGGTAT
CTTTTGTCCGTtctatcccactaaaaccgtcccagtcc

Coding sequence (CDS) from alignment at sc0000086:25613..41400+

>TCONS_00008527 ID=TCONS_00008527|Name=TCONS_00008527|organism=Clytia hemisphaerica|type=CDS|length=1407bp|location=Sequence derived from alignment at sc0000086:25613..41400+ (Clytia hemisphaerica)
ttttatggAAGTTCCATCATGCTCAGTTTTGTTAAGATATTGGTATTTTC
TCTCTCCATCCTGTTGTTCAGATACGTTGATGTTTTTGACATCCTTTCCA
AGTTCGAAGATTTAGATGATATACCAGCCCCGTTGAGATTTCACCAACCT
AATGTCACTATTGAAGCAAGCCTACCGGATAATATTACAACAGATCCTAT
CCTTGGTATTGTTGTTCCAATATTCGTTCCATTCCTCTCCATCCATGAAT
ATTGGAAAGTATTGAAAGATTCTGAATATGCATTATTGATGGCTGGCAAA
CAAAGTCGTTGTCCAGAACCAGCTTGGAATAGCAATGTTGACGAAAGAAA
TCCTGGTGTTGTTCGAACTATTCGTTTCCCGGCGAAAGAAATCACCAAGT
TTCGTGTCTTTGAAACCGAAGGTGATAAAGTCAAAATGCTGATGCATGCA
ACTTTTGAGGACTACGAAACGATTGGTTACAATTTGACAGCAGATCCTAC
ATCCAACTTCACAGAATGGAATGATACCTTAAAAGCGATCAATGAAGGCA
GCGTTTACAATGTCTCTTTTCGCACAGTTATAAAACCTGATGACACAACA
ATAACATGCCCCACAACTGAGATGTTCCCCATCCcTCGAGATTGGTGTGA
CCACGCGCAAATTTTGTTTTCTGGAAGCCTTATTCAAGCAACTATCGTCA
ACACGACAAaCCAGTGTCTTATTGAATTCAAAGAACAGATTCGACATTAT
CTTGACATTTGGAGATCGAAAGAAACACCAAAAACGACTGGTCAACGTTG
TGTGGTACCAGATAAAATGGACCTCGATTATGCTACCGAATATTTAGGAA
CGGAATTGGCAACGATGTATCCATACCCTGGTTATTTCAAATGCCACGCA
GACCACAATGGAGCAAACTCGAAAGTTCCACCATGCTTCGATGAACGTTT
AAACAAAATTTCGTACAAAGAAAATGGAGAAGCTATTTTGAAATCCATGG
TTGTGGGGAGAGGTGACTTTGTTGAAATCAATATGACGATGGAATTCTCG
AAATGGACCGGCGACTTTGCGACATACACGACCCAGACGTTCCGCGATTG
TGCATACAACATTCCGAACACGTATCTTGAAATGACCATCTACATCAAAG
ACATCATTATTCCTCCAGAGTTTGGGATTCCATCATGGATTGTTCCGTTT
GGTATTGTCATTGCCGTTGCCTTTGGTGTCCTTCTCATTGCATGTATTTA
CCTCGCAATATTCAGAACAAAGAAAGGTTTCAACattgagttatggagat
tccATCGTGCACAAAAAGACAGGGAGTTGAAGAAAAAGATGGATGAACGA
AAACAGAAAAGTCCAAGTAAACAAGAATACATAAATGGTGCTTATGAAGA
ATTCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004775XLOC_004775Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008527-exon-sc0000086-1491911889:25613..25649TCONS_00008527-exon-sc0000086-1491911889:25613..25649Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1510915933:25613..25649TCONS_00008527-exon-sc0000086-1510915933:25613..25649Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1575043694:25613..25649TCONS_00008527-exon-sc0000086-1575043694:25613..25649Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1491911889:25974..26103TCONS_00008527-exon-sc0000086-1491911889:25974..26103Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1510915933:25974..26103TCONS_00008527-exon-sc0000086-1510915933:25974..26103Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1575043694:25974..26103TCONS_00008527-exon-sc0000086-1575043694:25974..26103Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1491911889:27702..27735TCONS_00008527-exon-sc0000086-1491911889:27702..27735Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1510915933:27702..27735TCONS_00008527-exon-sc0000086-1510915933:27702..27735Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1575043694:27702..27735TCONS_00008527-exon-sc0000086-1575043694:27702..27735Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1491911889:28383..28592TCONS_00008527-exon-sc0000086-1491911889:28383..28592Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1510915933:28383..28592TCONS_00008527-exon-sc0000086-1510915933:28383..28592Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1575043694:28383..28592TCONS_00008527-exon-sc0000086-1575043694:28383..28592Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1491911889:30137..30360TCONS_00008527-exon-sc0000086-1491911889:30137..30360Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1510915933:30137..30360TCONS_00008527-exon-sc0000086-1510915933:30137..30360Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1575043694:30137..30360TCONS_00008527-exon-sc0000086-1575043694:30137..30360Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1491911889:31230..31304TCONS_00008527-exon-sc0000086-1491911889:31230..31304Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1510915933:31230..31304TCONS_00008527-exon-sc0000086-1510915933:31230..31304Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1575043694:31230..31304TCONS_00008527-exon-sc0000086-1575043694:31230..31304Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1491911889:37402..37544TCONS_00008527-exon-sc0000086-1491911889:37402..37544Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1510915933:37402..37544TCONS_00008527-exon-sc0000086-1510915933:37402..37544Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1575043694:37402..37544TCONS_00008527-exon-sc0000086-1575043694:37402..37544Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1491911889:37969..38073TCONS_00008527-exon-sc0000086-1491911889:37969..38073Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1510915933:37969..38073TCONS_00008527-exon-sc0000086-1510915933:37969..38073Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1575043694:37969..38073TCONS_00008527-exon-sc0000086-1575043694:37969..38073Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1491911889:38795..38847TCONS_00008527-exon-sc0000086-1491911889:38795..38847Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1510915933:38795..38847TCONS_00008527-exon-sc0000086-1510915933:38795..38847Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1575043694:38795..38847TCONS_00008527-exon-sc0000086-1575043694:38795..38847Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1491911889:39480..39637TCONS_00008527-exon-sc0000086-1491911889:39480..39637Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1510915933:39480..39637TCONS_00008527-exon-sc0000086-1510915933:39480..39637Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1575043694:39480..39637TCONS_00008527-exon-sc0000086-1575043694:39480..39637Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1491911889:40319..40426TCONS_00008527-exon-sc0000086-1491911889:40319..40426Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1510915933:40319..40426TCONS_00008527-exon-sc0000086-1510915933:40319..40426Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1575043694:40319..40426TCONS_00008527-exon-sc0000086-1575043694:40319..40426Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1491911889:41133..41400TCONS_00008527-exon-sc0000086-1491911889:41133..41400Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1510915933:41133..41400TCONS_00008527-exon-sc0000086-1510915933:41133..41400Clytia hemisphaericaexon
TCONS_00008527-exon-sc0000086-1575043694:41133..41400TCONS_00008527-exon-sc0000086-1575043694:41133..41400Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008527-proteinTCONS_00008527-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086supercontigsc0000086:25613..41400 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.451438	0.492014	0.84188	0.29416	0.107434	0.0848954	0.238986	0.319623	0.492306	0.415773	0.26904	0.72511	12.3274	13.0406	6.77043	3.52767	0.358828	0.143028	15.4694	13.1155	0.205401	0.375702	0.152238	0.359858	1.36853	1.9593	0.801074	0.272022	0.0589484	0.0300295
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008527 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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