TCONS_00008576 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008576
Unique NameTCONS_00008576
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2770

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008576 ID=TCONS_00008576|Name=TCONS_00008576|organism=Clytia hemisphaerica|type=transcript|length=2770bp
ACGAGACACCTTCTACTACGCAATCTTCAACAACAAACAATGCTAAACAA
CAACAGCAGCAACCACGTATCCGAAGAAAATTACCGTTGACAAGACAACT
GTCTGGTGAAGACGCCGATAAAGAAATTGATGACGAAAAACAAGATTCCG
TTAAGCCAGTTTCAGAAACTGAAGAAGTACAAGATGAACAAAAAGAGGCT
GGTGACGATGTTGTTGAAAACCAACAGAATTTAGATGAAGATGATACGAG
GAACAAACAAGATATGATTCAAGAGCGAGCACGTCAACTCATCTTGGAAG
CACGCAAGAAAGCAGAACAGAATAAGGACGCTGAACCAAGTGCCAGTGAC
GACCCTGATGTTCGTGCCAAGAAATTCTCCGAGATGAGGAGACAACGTGA
AAAAGTTCTCCAACATAAATTGAATCAGCAAGAAGATCGAAAACAGCTCT
TACGTTCACAAGCCAATCAGTTACTTTTGGATGCCAAGATGCGTGGATCG
CTGCATAACATTGATCGTAGCGCAAACAGTCCTTCGAATGAATTCCCACC
CTCCGCCTTTGGTGGCGAGGATATGGAAGAGGGCGGTATGTCACCTGAAA
CTCAACAGCGCATGCGCAATAATGATTTCCGTAAGAACCCGTTTACACTG
GTGAAAAAGAGCAATAAACAATTGAAACAGATCACACCGAAGAATTATTT
GAAAGAAGAACCTGATCCAGTTGATTCTGAACCAAAATTACCCACGAAGA
CTTCACCAAGCAAGGCTGCCATAACGTATGCAGAATCACGTAAAGTGGAA
TTCGACTCGTTCGAAAGTGGTTTCCAATACAAACCTAAAAGAGATGTCGC
GGCGGAAATAGCGGCCGAGCTTGCACGCTTAAAAGAAGAGGAAGATGAAG
CACAGCGTCAATTCGATCGCACTCAAGCGGAGAAGAGAGGAGGAGCACAA
CAATACGAAGGTGGAGTGCAGGATGAAGAGGGAGAGAGACATGTGGAGGA
GTGCATTCcatctgaagaagaagaagaggtgGAAGAAGGACACGtgCCCG
TCGATGACTATTTCTAcgaattggaaaattttAACTTGAAATCTGCAGAC
GAGTATTATCACAACGAATTAGCACAACTTGAACAAGAAACCAAAGCATT
AGATTTGGTGGCTCAGAAATTAGAATTAGAACTACGTAAAGCCATGGACG
CTGGCGACCAAGAAGGAGAAGAAGATTTGCTTCAAGAGTGGTTCAATTTG
GTCAACAAGAAGAATGAAATTATTCGAAGGCAAAACGAAATTGCTCTTCT
AGCAAAAGGTGATGACTTGGAGAGGAGATGTGAAATTGTAAACAGAGAAC
TCCGTGTCCTGAGTCAAATGAACGaatgggAGAAAACAGAGGAGATCCGG
TTGCGGGAAGACAATCTATTATCACAACTTGTGACACTGGTCAATCAGCG
GAATCGACTTGTTCAAATCGAAGACACGCAACTTCAACAAAGTGTTCACG
ACGAAGAGCATGTGCAAACAGTGCTCCAACAACAAACATCTTTCAATCAG
AAGAACACCACTGTTGGTAATGTTGTTGGATGGGTCAAAGGATTCAAATC
TAAGTTTTGGTGATTTGTTGATTATGGTTTAATAAATGGACCGAAAGTGT
TGGATGAGTTTTTCGTTGGAGAAGAAATCCTCAATCTTGGTGATTGGAGG
AAAATGGTGTTCCCTGAATATAATGGAGGTCATTCTTTTATCAACGGGTG
ACCGATTGAAAAACATGACTAGAGTTTTTGAAATAGGCTTTCTTCTTATT
TGCAAGCTATTGTTATGACCTTGGTTTTTTATTGGCTCGTGGTCCTAAGC
TTGATTAAGCTGGTcttaaatttactaattttcaagatgtttaTCTGgca
gggtcgacttttggtaaTTGTTGACAaatttcagggtggaaattagaaac
ttttcaattttttgtctaTTGTTAGTCATTTtggccacttttcagggtga
aaatgggaaaatgtttcattttttttgacagggtcccaaatttatgAGAT
ATTCATATCTGACATGGTCTATTTTTTCAAACTCAAGCGGCACGTCCCTG
TCGGCCggcaaggtcagtgccccctcCCCCTCCGGGTCTCTCCCTAATCA
ATATTTTAAGTGGGAGAATGGATGACCTCTCAGTGAATGCATGTTGAGTG
GTTGTCATATTGCTAAGCTTTGTGTAATAGATGTGTTTCATTTTGGATGT
GGGTGCAATACACCATCATTGAAGATCaagtttatttttggaaaatacga
agtttaatttcgcgaactggtaaagaacattttagacTTATTTATGGCCT
TTTCACGATAGAAGAAGGCCGATAAAGATTGGTTGTTTTGGATAAAATGt
agttttctttatttcttaagATATCTAAATACCtagataatgttttttta
ttttcttttctttctttaaaggttttgtttttaaataagagtgatatcgt
ttgcttactcatcaattttaatttacaagttttttatacTGAATTGACAC
GGacgtggagcaagattgattagaaagagggaaagaaaaacatttttttg
cttatatccgCACAATNgcaatgtccagggggtaaattgcaatgtccagg
ggtaattttttgtgtccacggggttgatttgatgtttgtccaggggtata
acccgtgtccagggggttaaaaatgaaaatgtccaggggtaattcatgaa
aaaaataatatatcctccac
Run BLAST on NCBI

transcript from alignment at sc0000086:788791..798618+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008576 ID=TCONS_00008576|Name=TCONS_00008576|organism=Clytia hemisphaerica|type=transcript|length=9828bp|location=Sequence derived from alignment at sc0000086:788791..798618+ (Clytia hemisphaerica)
ACGAGACACCTTCTACTACGCAATCTTCAACAACAAACAATGCTAAACAA
CAACAGCAGCAACCACGTATCCGAAGAAAATTACCGTTGACAAGACAACT
GTCTGGTGAAGACGCCGATAAAGAAATTGATGACGAAAAACAAGATTCCG
TTAAGCCAGGTAACAAACTAACTACTGTAGTCGAACTGTAAATGAGCGTG
TGTACGTGTTAATTGAATATATACGAAACTCTACAAAgtagattaaatta
aattttagattttgatgaaaaggtTTATTTGACTGAAGATTGCCTCCTAT
TCTCAAAAACTCTACAAATCTTCGACTAACTTTTTGTGGAGGTTTTATTG
GCTATATTATTGGGAGGATGTTACGCTAGgggtttaaaatgtttttaact
tcaCCCTTTTTCTTACACCCCCATCTGCCAAAAAAAGCAAGCTTTGGTTC
AGCTTTGTACAGTACATACATATTAAAACCCGGTAAAACGTTTTATTGTT
CAAGTTTCAGAAACTGAAGAAGTACAAGATGAACAAAAAGAGGCTGGTGA
CGATGTTGTTGAAAACCAACAGAATTTAGATGAAGATGATACGAGGGTAT
GTTTAAATTATTCCTTGTCTTTATCATTattgagtttatgtatttgcact
tttgaggatggTAGAGTGACTGAGTCGATTTGgtataacccgcagttctg
accctcAAAAATACGGTAAAACGGTAAAAGTgatgatttaccgtcgtcct
cagtcagtcaggatgtagacaaattagatgcttaccgtctccgtcgcaca
aaaaacacacacataaactcggtattatcATTGCTCGACAGTGTTTTTTC
CCACGCAatatagacagctccaggcttttattttttgcgctcgaaacgaa
ggaaggtATGATGCAGCCTACAAAATTGACAGATTCGAaactaaaatcga
aatatttacGAACAATCTGCTGCTCTtcgatgtttttaatttttatttac
gTTTTGTTTCCATAGAACAAACAAGATATGATTCAAGAGCGAGCACGTCA
ACTCATCTTGGAAGCACGCAAGAAAGCAGAACAGAATAAGGTTTGTTGTT
AGGAGAAAGAAATTGCTGATAGCAGGACTATCATTGGCCTGGGAGAATCT
ACGAGAAACTGTAAAATGTGTTGTCTACAGAGGGCAAACCTAAGATCTTG
CTGGGTCATCTCTCGGTTAGTCTATCAATACACGAGGTCTACTACACAAC
CAGCCGCCAGGGTTATTTGTGACTAAGTTTGTATAAACCATCTTCTTATA
TTAAGTCTATAAGCGTTAGAAGAAAATCAATTACATTTCCCATTTCAAAT
ATAAGGATAAAAAAGGGGCTTCAAACTAACTTCATTGtcttatttctttt
attgagaAGGACGCTGAACCAAGTGCCAGTGACGACCCTGATGTTCGTGC
CAAGAAATTCTCCGAGATGAGGAGACAACGTGAAAAAGTTCTCCAACATA
AATTGAATCAGGTATGATACAAATGTTAGCATTGAAGTAaggacaaatat
tttttttaattgtcagGATGACTCCCAGGACTATTTTGCATTCCATGATA
TGTCCTATGTGAGTCACTTCAGTTTTAGAACTTTAAGGGgaacattgggc
ttttccagaaaaagatttaacccccactgttgaggatattgatttttttg
aagtaTCGACCTCCTTgaatatcctactttattagtaaagacatCCCTGG
ACATCcacttttaaaaatatgctcaaccccctgggtatcctctcttataa
agatgcttacccctggatatcgtatttttttacttgagaAGACACTTTAC
Cctctggatatccgctcccctatagatatttaaccccctggatatccact
tttgaacaaaaatcgttaacccccaaGATAttcgatatcctcaacagggg
gtcacggactatttctggaaaatccCATTAGCGGGCGGTTCTAGGTAGTT
TTTGTGTATTCTCAAGTGAACGAGTTTATTCTTTTTGTGTATGGTAAAAC
ATCCTAATGGGATAAGCGCGTGGGGCTTAAACCGTAGAACACagcacaaa
aaatattttttactccTCGCCCTTCAATCATTCGTCCCTTCCATCATTCG
TCAATTAGTAGCTTTCCAATgcaatcaaactttcaaaatgaagaaaaaac
tttAGTGTTTTTTTCCCTGTTTTCTATCCGTTGATGCGATTGCACAGGGT
GGAATGGTATTTTCCTTTTCGTCCTttatttttcccctttttccaAGCCC
AGTCTAAAAAACATCGAAAACAAATTTAAGCTTTTGACAATGTGTTCGAc
gcttttgttttctttcctcAAATTCCCAGCAAGAAGATCGAAAACAGCTC
TTACGTTCACAAGCCAATCAGTTACTTTTGGATGCCAAGATGCGTGGATC
GCTGCATAACATTGATCGTAGCGCAAACAGTCCTTCGAATGAATTCCCAC
CCTCCGCCTTTGGTGGCGAGGATATGGAAGAGGGCGGTATGTCACCTGAA
ACTCAACAGCGCATGCGCAATAATGATTTCCGTAAGAACCCGTTTACACT
GGTGAAAAAGAGCAATAAACAATTGAAACAGATCACACCGAAGAATTATT
TGAAAGAAGAACCTGATCCAGTTGATTCTGAACCAAAATGTAAGTGATTT
ATTAATAAGATTTAAAATCAGTAAAAGGTCCATATTGACGTAGCCTACAC
AAGACGCCAGATCCAGGTTTTCGGGTTccaaacattcaattttttgacgt
cactttcgAAGTCCTTGCTGTATGGACGTCGAAAAAACCTTGTATGCCAT
CTGGTCTTAGATCAGCGGGTGATGTAATGAACTGGTTTGAATCTTCAAAT
GGACCAAGGCCGTTATTGGTCTTCTAGGCTGATGACAAgcgtttattttt
ttttaatttcaacattCATTTGAAATTCTTCTTTTATGTGTGGCTTTGAT
GGTTTTTAAATCAGTCAACTTAATTTTCCCGCTCGAGGTGTCTGTCTGTC
GGACcgcaagaattttttttatctataaagATTAAGCAATTAAAATTGGG
AAATATTTCGTTTCTTGGAGGTCTTGTAATTTTTCTTGACGTAAAAGCTT
AATCTCTAGGAACTCTCTGCACGTTTTAATAAAAAGCAACCTTGTCTTTG
CCATCCAAAACAGTTGAACTCGCGCTGCTGCTTACATATGTGGAACATGG
TAACTATAGTTTCAAGACATGAGTTTAGGAAAAGATGTTGCAATTTTATT
CTTTCATGTTTTAGTACCCACGAAGACTTCACCAAGCAAGGCTGCCATAA
CGTATGCAGAATCACGTAAAGTGGAATTCGACTCGTTCGAAAGTGGTTTC
CAATACAAACCTAAAAGAGATGTCGGTAAGTGTTCGACGCAGCTACTTAT
TTGAATCAGTGTTAAAGGTTCTTCCCTTTAAGATAGATTTCCGACTCAGT
GAAGTATATAGAGAGGCTTCCCCGTCTCCAACttctgcataattcaccag
AATTTCATGAATATCTGCTAATCTagtataaaatcaattttccatcTTAG
ATAGTGGTTTAGGCGATCATGAAGATCTATTGAAAAACTACTGCATATCT
CTTTttaatgatgacatcatcatgCCTTTTACAAGACATCGGACAAAATA
ATTTATCGCGGAATGAGAATGATGGTTCTTGGAATTCTTGTTAGAATCCA
ACTTCGTCAAAGTCCAGAATAAAGAACATTTCCAAGGGCTCTTATCCAGG
ATGAACTAAATGATCATCAGCAGATATGTATAAAACAGTTTCCAATCTGT
TATTTATTTAGCGGCGGAAATAGCGGCCGAGCTTGCACGCTTAAAAGAAG
AGGAAGATGAAGCACAGCGTCAATTCGATCGCACTCAAGCGGAGAAGAGA
GGAGGAGCACAACAATACGAAGGTGGAGTGCAGGATGAAGAGGGAGAGAG
ACATGTGGAGGAGTGCATTCcatctgaagaagaagaagaggtgGAAGAAG
GACACGtggtaagaacaatttcatcAGAACATTATGCtgacatttttgtc
aaaaacctaagaacatattaagaacaatttcatcAGAATGTAAAGTTTAT
TTGTCGAAATGTAAGAAGAATTTCATCACAATATGAGGTTAATTTTTCGA
AACccaaaaacaaattcaaagaaCAATCTTTAGTCTCAAATTCCATAAAG
TAAAAAATCTAAAGCTTATTTTAAGAACTTTAACATCTTTAATCAATACA
CTCTCCTCATGATAcatgaaattttgatgatttataAACTTTTATTTGAC
CAGTCTATGTCTTTCTGCTTACAGCCCGTCGATGACTATTTCTAcgaatt
ggaaaattttgtgagtattttaaATTAGATGGTATTTATCATAATGTATT
TAAAAGCAAAGTGTTTGTTTCAATAAATGACCCTCTGCATTGACATCCCC
CGTAAACGAAACCCTATTTCTATTTAAAATTTGATGTAATAGTCCCAATA
GTTAAAGACCCTTTTTCTGAGATTGAAATTCACAATTTGTGCTAGTGTTC
TTCCGTCCCTGCGAAGTACCGAAAGCGTCGTTTCCGTCTctcgaaattca
acaaaattcaatgaaatattatcaatagatcttttcataaattacatcac
gaatatcacttgcctcgtttcgAAATGATTGCCTAGGTGATTAACTCCCG
Gcggtttttattaaaattactttttatttataaaaaaataactcaatgtc
tcaagggacataatcaccgtggtaattgtttgaatacgagtgatgttcgt
gacgtaatttatgaaaaggtctaactacaatcagcgccgaaatatattgg
caattttgggtattttaacgtttttcagaatttaaaagtcgggcgagaat
tgtagtttcagtacttccactttgcttcattggatttttctatttgggag
gggttaagtggcttccaggctatattctgagctttattggaaaatttttg
aacttttagatcctgagattctaaggtcctagtcctaatgttaaaactct
acttccaaCTGTTCTTCAGAACACTTAAAAATCATTTACGGtttcaaagt
tttgagggaattccccttttgtgccaaatatttctgCGCTGATTGTAGTC
TTATTTAAGGTGAAAAGACAGAGATTGCTTTCATTCTTATCCTAAGGTCT
CTAATATTATCCTTCTAGAACTTGAAATCTGCAGACGAGTATTATCACAA
CGAATTAGCACAACTTGAACAAGAAACCAAAGCATTAGATTTGGTGGCTC
AGAAATTAGAATTAGAACTACGTAAAGCCATGGACGCTGGTGAGTTTGAC
CAGGGCTTTGATTTTAAACTTCTGTTGAGTCCATCACAGTCTTTTCTTTT
GCCTGCACCTTGTTTGGTATTCTCAACTTCATTTCAGCTATGTATGGCTA
TCTGTTTTTCCGCTTTTGTACCCCTATAATATAACCTTCCTGATAATTTC
TTTCCCGGACTTAAATAAATCAGTGGGGTCTGGCTGaaattgttcattct
ttttctttggGTAAAAATGTTCGGGACTTTCTTTACATTTAGAAATTCAT
ATTTCCGGTGCCTTGAGACGAGAAGAAATATTACTCGATTCAATACCTCG
GTTTATTCAATCCAATGTAGTTTTCAGGTTTCGACACTCCCGTCGTCTGG
GTCGATTATAATGTATTTTTATAATTGTTGCTAGGCGACCAAGAAGGAGA
AGAAGATTTGCTTCAAGAGTGGTTCAATTTGGTCAACAAGAAGAATGAAA
TTATTCGAAGGCAAAACGAAATTGCTCTTCTGTAAGGAATTCTCTAAAGA
CTTTTTTCGAATACCTTTGTCCATAAGTTTATATATTAGATATTTTGtaa
tgaaaaatctacaaaatttgccttgtttgggGGCAAACATGCTTTGTTTA
GGGGTAACGATGAATGTCCTGAGGATCGACTGCTGCTTGTCCAGGGGTTA
AAGGTCAAATGTTAATaacctccacccccccccccttattcaattttttt
ccggACCGAAGAGCCCGATACTTCTAAAGTGCTGAAAAAGGCCAGCGGCC
GAAATATTCATTAGAAAGATTATGTGTTTTTTGCTAACTCGTTAATCCTT
CTGATTTAGCTTGATAACGATAGAAATTGATTAGgtttaaatatattttc
agtCGATATTCATTTCGTTTTGAGGCATTTTGCTTATAGTTTATTTATAC
CATACCTGATTTTTTNTATATTCAGTCGATATTCATTTCGTTTGTTAGGC
ATTTTGCCTCTGGTTTATTTATACCATACCTGATTTCTTTGTAGAGCAAA
AGGTGATGACTTGGAGAGGAGATGTGAAATTGTAAACAGAGAACTCCGTG
TCCTGAGTCAAATGAACGGTACGCTATAATAAGAAATGTTTTTACTTTAA
CTACTTCGGTCCTTGAATATAATACAGTAAGGCTCACTACTTTTTCGACA
GAAATTCAATACACAggctgcaaaattaaagtctgaagacaaatcacgct
tttactcgaaatttttatgtgcttgttacatgacatttatttctgattgg
ttcgaattcaTTGACACttataaagttatcagctgtaaagTGTAAATTCC
CAAGCATGGGAATagaatcacgtgaactttttcgagtaattacatgtttt
gactgcattgattaTAATTTTGCGATCCTTGTATTGCAAATGTACTCTAG
GAAAACTCACATCCTAGCCTTCAGTTCTTTTAGAATGCTTCTAGATAAAT
CTTCTAAAGCTGTGGATATTATAGACAGTATCAAAGTGCTCTACATTGTT
GATCTGAGGCTATcgtttgacaaaaaaattagcAGGGTTTTTGAATGATT
GATTctgtaatttctttatttttaagaagaGTCCCTTTTTCGCTTAGTTG
ggaaatttgaatcccgaaACAAAACAATCTGTACTGCAGTTTATTGGGAG
TTGTGAGAGTGACGTGATTTGGTCGTTCATCACGAGTGTAGATTTGAGTA
CAATAGTTGGACATTATAGTCCTGTAGAACTTTGTCGAAAATAGAgtcaa
cctagaaaaaattCGAATAGAAGGTTTCtttacaccgttggaaagataat
tttatcagctttcgAATGTGGGGTAGAGTCAATTTACCTTATATTCACCT
TACATTACCAATATGATAACAGGGGTTTTAAACGAATctatgatgatttt
ttttttagaatgggAGAAAACAGAGGAGATCCGGTTGCGGGAAGACAATC
TATTATCACAACTTGTGACACTGGTCAATCAGCGGAATCGACTTGTTCAA
ATCGAAGACACGCAACTTCAACAAAGGTATTATCCTTTGTAAATTGTATC
ATTCACCCCGTGACCAAAAATGTTATTCGAATATGATAAAGATTTGAATT
ACATAGTAATTTAAATCGCTTTTCAGCTGAGGGCCCTCAATCTCttagtt
tgaattacagaaagtttCGAATGATTGAAGTTCGGATTATAGAGAATTGA
CTGAGAATCTACGACCTAAGAATCGAACCAGGAATCTCTTGCACCTTTTG
ACTTCGCATATGGCTatcgtgacgtcataatttcttATTCTCATTTTCCA
GTGTTCACGACGAAGAGCATGTGCAAACAGTGCTCCAACAACAAACATCT
TTCAATCAGAAGAACACCACTGTTGGTAATGTTGTTGGATGGGTCAAAGG
ATTCAAATCTAAGGTTAGTATTTCCCGGTTGTACTTTTTATCCTCTGACA
TTTTGCTGTAAAGAGTGATCTCTATTTGTTCCTTCCCTGTATGTGTAGAA
CAAAAATCATCAATCATTCTCGAAAGTCCTTTTAAGTGAGTAAGTCTTTC
AATCGCAGTCGGGGGCGTCCCGAAGGCTCTtcttctttcgatagctatct
accggAAGGTAGGGGATGGCGCCACTTTTCCTCCCTGAATCGCTCCACTA
ACCCTTCTTATTTATTGCTGAGCATtgagcagagaggcatcaagtaccat
tttggaaatcctTGGTATGACCCGGCAGGGCCATAAAACGGCCGCTAAAG
TCCTTCTTTTACTTCACTCCTCTTATCTTCCGTAGTCGTAGACCTTTTAT
AGCTAATCCACAGGAGACTTTCTAAAGTCACCTTAAAATAAGCCCTTTTA
AGGGATTGAAATTTCACAAACAGAGCCAGAAAGTAACCTGCGAAGATCGA
TGAAAACTATATTACAATCAAACGAATCTTATTTTGTGAACTTCTCAACG
GGCAAGCTATAatagaaatgaaataaaattaataaaatggTGAGCGCAGA
ACTGAGCGCTATCATCTCATATATATGTAATCCTGAAGAAATGTATATTA
AGTCGAAATTGTTGAATAATTTGAAGTTTGGGACCAAGATGTTCATGGTA
AATAAAATTGGGAACcgaaaagaaaagtgaaaatggAAAATTAAGTAGAC
CTCCTTTTTTGTACCTTTAAAAAAAGTATGTAATATGTTTTTGATTTATT
CTGTTTgagtttcgatttttttcctcttcattttttctattgttttgttt
tttcacgTTTAGTTTTGGTGATTTGTTGATTATGGTTTAATAAATGGACC
GAAAGTGTTGGATGAGTTTTTCGTTGGAGAAGAAATCCTCAATCTTGGTG
ATTGGAGGAAAATGGTGTTCCCTGAATATAATGGAGGTCATTCTTTTATC
AACGGGTGACCGATTGAAAAACATGACTAGAGTTTTTGAAATAGGCTTTC
TTCTTATTTGCAAGCTATTGTTATGACCTTGGTTTTTTATTGGCTCGTGG
TCCTAAGCTTGATTAAGCTGGTcttaaatttactaattttcaagatgttt
aTCTGgcagggtcgacttttggtaaTTGTTGACAaatttcagggtggaaa
ttagaaacttttcaattttttgtctaTTGTTAGTCATTTtggccactttt
cagggtgaaaatgggaaaatgtttcattttttttgacagggtcccaaatt
tatgAGATATTCATATCTGACATGGTCTATTTTTTCAAACTCAAGCGGCA
CGTCCCTGTCGGCCggcaaggtcagtgccccctcCCCCTCCGGGTCTCTC
CCTAATCAATATTTTAAGTGGGAGAATGGATGACCTCTCAGTGAATGCAT
GTTGAGTGGTTGTCATATTGCTAAGCTTTGTGTAATAGATGTGTTTCATT
TTGGATGTGGGTGCAATACACCATCATTGAAGATCaagtttatttttgga
aaatacgaagtttaatttcgcgaactggtaaagaacattttagacTTATT
TATGGCCTTTTCACGATAGAAGAAGGCCGATAAAGATTGGTTGTTTTGGA
TAAAATGtagttttctttatttcttaagATATCTAAATACCtagataatg
tttttttattttcttttctttctttaaaggttttgtttttaaataagagt
gatatcgtttgcttactcatcaattttaatttacaagttttttatacTGA
ATTGACACGGacgtggagcaagattgattagaaagagggaaagaaaaaca
tttttttgcttatatccgCACAATNgcaatgtccagggggtaaattgcaa
tgtccaggggtaattttttgtgtccacggggttgatttgatgtttgtcca
ggggtataacccgtgtccagggggttaaaaatgaaaatgtccaggggtaa
ttcatgaaaaaaataatatatcctccac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004797XLOC_004797Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008576-exon-sc0000086-1491911889:788791..788949TCONS_00008576-exon-sc0000086-1491911889:788791..788949Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1510915933:788791..788949TCONS_00008576-exon-sc0000086-1510915933:788791..788949Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1575043694:788791..788949TCONS_00008576-exon-sc0000086-1575043694:788791..788949Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1491911889:789295..789386TCONS_00008576-exon-sc0000086-1491911889:789295..789386Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1510915933:789295..789386TCONS_00008576-exon-sc0000086-1510915933:789295..789386Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1575043694:789295..789386TCONS_00008576-exon-sc0000086-1575043694:789295..789386Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1491911889:789806..789880TCONS_00008576-exon-sc0000086-1491911889:789806..789880Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1510915933:789806..789880TCONS_00008576-exon-sc0000086-1510915933:789806..789880Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1575043694:789806..789880TCONS_00008576-exon-sc0000086-1575043694:789806..789880Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1491911889:790200..790301TCONS_00008576-exon-sc0000086-1491911889:790200..790301Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1510915933:790200..790301TCONS_00008576-exon-sc0000086-1510915933:790200..790301Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1575043694:790200..790301TCONS_00008576-exon-sc0000086-1575043694:790200..790301Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1491911889:791170..791479TCONS_00008576-exon-sc0000086-1491911889:791170..791479Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1510915933:791170..791479TCONS_00008576-exon-sc0000086-1510915933:791170..791479Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1575043694:791170..791479TCONS_00008576-exon-sc0000086-1575043694:791170..791479Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1491911889:792105..792215TCONS_00008576-exon-sc0000086-1491911889:792105..792215Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1510915933:792105..792215TCONS_00008576-exon-sc0000086-1510915933:792105..792215Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1575043694:792105..792215TCONS_00008576-exon-sc0000086-1575043694:792105..792215Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1491911889:792652..792848TCONS_00008576-exon-sc0000086-1491911889:792652..792848Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1510915933:792652..792848TCONS_00008576-exon-sc0000086-1510915933:792652..792848Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1575043694:792652..792848TCONS_00008576-exon-sc0000086-1575043694:792652..792848Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1491911889:793165..793200TCONS_00008576-exon-sc0000086-1491911889:793165..793200Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1510915933:793165..793200TCONS_00008576-exon-sc0000086-1510915933:793165..793200Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1575043694:793165..793200TCONS_00008576-exon-sc0000086-1575043694:793165..793200Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1491911889:794059..794179TCONS_00008576-exon-sc0000086-1491911889:794059..794179Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1510915933:794059..794179TCONS_00008576-exon-sc0000086-1510915933:794059..794179Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1575043694:794059..794179TCONS_00008576-exon-sc0000086-1575043694:794059..794179Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1491911889:794575..794671TCONS_00008576-exon-sc0000086-1491911889:794575..794671Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1510915933:794575..794671TCONS_00008576-exon-sc0000086-1510915933:794575..794671Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1575043694:794575..794671TCONS_00008576-exon-sc0000086-1575043694:794575..794671Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1491911889:795185..795258TCONS_00008576-exon-sc0000086-1491911889:795185..795258Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1510915933:795185..795258TCONS_00008576-exon-sc0000086-1510915933:795185..795258Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1575043694:795185..795258TCONS_00008576-exon-sc0000086-1575043694:795185..795258Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1491911889:796099..796216TCONS_00008576-exon-sc0000086-1491911889:796099..796216Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1510915933:796099..796216TCONS_00008576-exon-sc0000086-1510915933:796099..796216Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1575043694:796099..796216TCONS_00008576-exon-sc0000086-1575043694:796099..796216Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1491911889:796492..796603TCONS_00008576-exon-sc0000086-1491911889:796492..796603Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1510915933:796492..796603TCONS_00008576-exon-sc0000086-1510915933:796492..796603Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1575043694:796492..796603TCONS_00008576-exon-sc0000086-1575043694:796492..796603Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1491911889:797453..798618TCONS_00008576-exon-sc0000086-1491911889:797453..798618Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1510915933:797453..798618TCONS_00008576-exon-sc0000086-1510915933:797453..798618Clytia hemisphaericaexon
TCONS_00008576-exon-sc0000086-1575043694:797453..798618TCONS_00008576-exon-sc0000086-1575043694:797453..798618Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086supercontigsc0000086:788791..798618 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.417019	0	1.20829	2.58046	0.920316	0.213805	2.05576	2.39534	0	0	0.560407	0	0	0.457118	0	0	0	0	0.404169	0	0	0	0	0
Blast
[Close]
BLAST of TCONS_00008576 vs. Swiss-Prot (Human)
Match: EHBP1 (EH domain-binding protein 1 OS=Homo sapiens GN=EHBP1 PE=1 SV=3)

HSP 1 Score: 127.872 bits (320), Expect = 7.321e-30
Identity = 73/156 (46.79%), Postives = 102/156 (65.38%), Query Frame = 3 
Query: 1068 ELENFNLKSADEYYHNELAQLEQETKALDLVAQKLELELRKAMDAG-DQEGEEDLLQEWFNLVNKKNEIIRRQNEIALLAKGDDLERRCEIVNRELRVLSQMNEWEKTEEIRLREDNLLSQLVTLVNQRNRLVQIEDTQLQQSVHDEEHVQTVLQQ 1532
            E+ N   K   +Y   ELA LE E K +D  A  +E  LR  MD G + E EE ++QEWF LVNKKN +IRR N+++LL K  DLERR E++NRELR +  + +W+KTE  + RE  LL +LV LVN+R+ LV+  D Q +Q+  ++EH++  L+Q
Sbjct: 1061 EVLNKGFKDTSQYVVGELAALENEQKQIDTRAALVEKRLRYLMDTGRNTEEEEAMMQEWFMLVNKKNALIRRMNQLSLLEKEHDLERRYELLNRELRAMLAIEDWQKTEAQKRREQLLLDELVALVNKRDALVRDLDAQEKQAEEEDEHLERTLEQ 1216
The following BLAST results are available for this feature:
BLAST of TCONS_00008576 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EHBP17.321e-3046.79EH domain-binding protein 1 OS=Homo sapiens GN=EHB... [more]
back to top