TCONS_00008756 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00008756
Unique Name	TCONS_00008756
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1731

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000087:70851..80495-

transcript sequence

>TCONS_00008756 ID=TCONS_00008756|Name=TCONS_00008756|organism=Clytia hemisphaerica|type=transcript|length=1731bp
CAACCATCAGTTGAGGGAAGGGGTATCTACTTCGACCGAAACTCAATTTT
GCAAAACTAGATCCAaactttttttactaaaatcttATATATTAAAATAG
TTTTAGAATTGTTCATGTTAAAAATGATACATAGTGCAGTTTTAAACATA
CAGTAACGGTCATTTTCTGGCATTCAAATGGTTACAGAATTGTTATCCAA
AATATTAGATGACTTTAAAGAACACACAAGGCCAACACTTGAACCAGTGT
GATATATAAAGTAATCTCATGTAATTTATGGAGGCTGTGGTTCATTGCTT
TAGAAATTTCGGGAAGCTTTTACATCTGCCCAAATGTTAGCTATCACATC
TGTCTGCCATGGAgttatcttttttttcagaaaatatagaATGAGTTCAC
CATTaagtaatttgaaaaataagaaaagaacaCCATTGAAACAAGGctca
AGAACGGCTCCATTTAAACCTAAAGAATTTCATGAGGATGACCTTCTTGA
TCAAGTTTACTCAACTGAGGGGGaaaaatacaaagcttctcatGGTGTAA
ACAGAAGCTCGCCAGTTACAAATGGAGATCTCATGAAATCCATGATGTCA
AGATTGACTGCAGCTGAAAAAGGCCTGACCGAAGCAGaacaaagaaataa
agaaaaaGACAAGAAAATCAGAATTCTAGAAGAAAAGTGTGAGATATACA
AAAAAGCACAAGGATATGGTAGCAATCAAGTTTTGGAACTGGAGAGAAAA
TGCCACAAACTACAAAGACAAATACATAGCATGGAAaattttttgGAAGA
TTATGGTATGATATGGGTTGGTACAAACGATAGTTCTGATGAGGATTGCT
TTGACAATGATGGATTGAACGATGAAGGTGACAATGAGGAGCCATTATGG
AATCCAGACTCGTCGATCATTGAACAATGTCATCCACAACACCAGCATAA
GGAGTTTCATATGGATTATGACTTGGTATTAAAGAACATTGGCGAATTGA
ACGAGATAGCAGGTGAAGGACAACATTTCATCAAGCATACTAAAGATGGC
GCCCGACTACAGGTGAAAGAATCGGTGCCGTTAATTTTGTATGCGAATGG
TATCTTCATGTTTGGTGGACCATTTCGTTCGTTTGAAGAAAAGACCACAC
AGATTTGTATGAAAGATTTAATGGATGGATACTTCCCAAGTGAACTTCAA
AATACTTACCCTGACGGTGTACCTTTTACTGTGACAGATAAAAGAGACAA
AACTTATCGCGATAAACGGATGGAGAAACTATTCCCTGGTCAAGGTTATT
TATTATCGCCAGAAAAGTCCTCCCCGACCACGCGTAATAGTGAAGATAGT
AAAGAAAATGATGGCAAATCAAATGAAATTAATAGGGTAGCAATGGAAGA
AAATCAACGTGaagGTCCAAAATACAGCactgaaaattttctttctaagC
TGCCATCGTCAGTGTTAAAGAATGGGAAAATCATTGATATTCTTGGCGAT
CTGAGAGAAAGTTTGCAGGAGAATAATCAATCGACAAAACACAACGTGGT
AGTCATCGAAACTGATGTTGTCCGAAATATGAAATCTagATTGACCAATG
GTCGGAGAAGTCGCCCACAAACACCGTCCAATATTACCACTCTTCGAATC
AAGTCTGAAACTGGCGAAGAGACGTACGTACTGAAGATGTTGTAACAGTA
ACTTCAGTAACAAATATTTCATCTGTTGTAG

Run BLAST on NCBI

transcript from alignment at sc0000087:70851..80495-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00008756 ID=TCONS_00008756|Name=TCONS_00008756|organism=Clytia hemisphaerica|type=transcript|length=9645bp|location=Sequence derived from alignment at sc0000087:70851..80495- (Clytia hemisphaerica)
CAACCATCAGTTGAGGGAAGGGGTATCTACTTCGACCGAAACTCAATTTT
GCAAAACTAGATCCAAACTTTTTTTACTAAAATCTTATATATTAAAATAG
TTTTAGAATTGTTCATGTTAAAAATGATACATAGTGCAGTTTTAAACATA
CAGTAACGGTCATTTTCTGGCATTCAAATGGTTACAGAATTGTTATCCAA
AATATTAGATGACTTTAAAGAACACACAAGGCCAACACTTGAACCAGTGT
GATATATAAAGTAATCTCATGTAATTTATGGAGGCTGTGGTTCATTGCTT
TAGAAATTTCGGGAAGCTTTTACATCTGCCCAAATGTTAGCTATCACATC
TGTCTGCCATGGAGTTATCTTTTTTTTCAGAAAATATAGAATGAGTTCAC
CATTAAGTAATTTGAAAAATAAGAAAAGAACACCATTGAAACAAGGGTAA
TATTTTCGATTTTTGTACCATGACGTTTCTTTTTTTAATTTTTAGCTGTG
TTTAAAATGTGTGTCTAATTTCAGACCTGTATGGGTTAGAAAAAAATTCA
CAGGATTTTAGACCCTAAAATCTCTGATTTTCAAAAATTGATCCACGTCC
TCGTCATTTCGTAAACCTAGTACCCCCCCCCCCATTTTGATGAAGAGATA
GATTTTTATACATATGACTCTTTCCAGTAGCATTTCTTTTCAATAAAGTT
TTTACCTGATAATAAGTTTGATTTTAATTCTACAGGCAAATACCTACTGG
TATCTTTTAATACTCATTGAAATAGTTGATTAAATTATAAAAATTCATAC
CCGTACAGTTGAAGCAAAAGAAAATGAAAACAAATTGAACAAAATTTTAA
TCACCCTATTTTTACGTTTTCCACTCGGTACATTACCTCCAAATTCTATA
CTTGCAAGGTTTTTAGCTAAAATTTTGTTTGTTAGAAATCTAATTAATTC
TACAGTAGAAAACAAATGTATGTTAAACATTTCATCCAGAAGTCAGTCTA
AGATTCACTTAATGTATTTGCTCTATTTTTCTTTAGCTCAAGAACGGCTC
CATTTAAACCTAAAGAATTTCATGGTATGAAGCATCTACATCTACAATCT
ATCCGAAGCAAGATGAAAATTTTAATTCGAAATAAGGATTTGCACGAGTC
TGTTTTGACTGAAAAAGGCAAACTAGCATTTTTCAAGCATTTTATCCTTT
TGATAAGCTTTGCATTTGGTGGCTTTAGGAAATAATTATAATGATACAGA
TAATGATAATTATTTAAATTCCAGGGTTTTTCCTTTATGATGGAGGGTTC
CTTTAAAATCTTAAGTTAAGTTTGTTTATGATGATAGACCACGCCAAACT
TACTTTTGTTCTTCTAATTTTTTTAGAGGATGACCTTCTTGATCAAGTTT
ACTCAACTGAGGGGGAAAAATACAAAGCTTCTCATGGTAATAGCTTCATA
CATAAAAGGATACAACAGTTATTCAGATTTGGATAAACTTTTTAAATTTT
GGATTTTACTGGAAAGATTTGATTTTAAATCAAACTTGTGGTATGCAATT
TTCTCTCAATTTTCTTCTTCTTTAAGGTGTAAACAGAAGCTCGCCAGTTA
CAAATGGAGATCTCATGAAATCCATGATGTCAAGATTGACTGCAGCTGAA
AAAGGCCTGACCGAAGCAGAACAAAGAAATAAAGAAAAAGTTTGCCTTTA
AATTCCTTTTTCGAATTTGTATTTTTTCAATTTATGTATAGATCTTTTTA
CATCCTCCTTATGACATTGAAAAATAATCGGCCATTTATTGGTGTCTAAA
AATAGTTATAAGTGCTTATTAAAAACAACATGACCCTCAAATATTTATTA
TATAGTAAATAATAAACATTAGAATATGCAAAAAATAATTACTGTAAGAT
AAACCAACAAACCCTATATAATATGTCATACATAGTATGTACATTTAAAG
GAAGAAGTTTTGGCAGGAATTTAATTTGGTGGCTGGCAGAAAAAATAAAT
TTTGGCGGGAACTTATTTGGCGCCAAATTTTCTTGCTGCCAAAATTCCTT
CCTTTAATATATGCTGATGCACCAGCATCTCAACAATTACTTTATTTCTT
CATTCGCTTGTCTAACCTTTATTCTGCACTATTATTTTTAAAAATTGATA
GTAGCAGCAGCACTGCTTTAGACTAGACAAAATAGTACTTTGCTTTACAG
AATATTAAGAGAATTTAATTGTCTGTTTTTCCTGGTACTGACACTATTGT
ATTGATACACTCACTTATATCAAGGCACAAGTCTCTCCAACATGCTTATT
CAGATGTTTTATTTGAATGATTTTGATTTGATTATTAGGACAAGAAAATC
AGAATTCTAGAAGAAAAGTGTGAGATATACAAAAAAGCACAAGGTAACTT
GCCTTTTTAACTCATCCCGTTTCCAATTTTTCCAAAATTTTAAGAAATTC
CTTTAAAATCATAATCTGGTCAGGGAAGGTTATTGTAATTTGGAAAATTG
TTCGGATTGAAGCTAAAAGGGTACTTTTATAAATGATAGGTTAAATAGTA
GATAGAATAAGGACATCTTTCTACCGTAACTGTTCCTTTTAGGATATGGT
AGCAATCAAGTTTTGGAACTGGAGAGAAAATGCCACAAACTACAAAGACA
AATACATAGCATGGAAGTATGTGAGATCACTGATAAATTTAGAAATTAAA
ACCATGGTCCTTAAAATCTGGCTCTTCTTGACCATAATGGAAGAGTGTTA
GGTGTAGATAAAAAAACTTGTTAGAAACTACTGGTAAAAAATCACTTTAA
ATGTGAACTGATTCCCCTGGAAAGATGACAATATTTGCGCAAATCTCCCT
TGAAAGATGCTTAATAAAGAGGTCTAACATTCAATCTCCTCTTCAAATAC
CTCTGGGAAATATTAAAACCATGTAGTTCTACTAGAAACTTAGATGTCTA
AGCATTATGAGATATAAAACTAGGAAATCCATGTTCAACCCCTTGATTTT
CCTGGGCTGGTCAGTTCGTAGACGATTGCTAGGGTGATCATCATGTGGAC
TCTGTGGATAAAATTTGACGCTTAAATTCTCATTTACAGCTAAAAGAAGA
ACTGGTACGAATATTCAAAAGCCAAAAAAAAAGATTCCCTAAAACATATA
AAACTGCTTGTTAAGATTTCCTTTTTTTGCAGAATTTTTTGGAAGATTAT
GGTATGATATGGGTTGGTACAAACGATAGTTCTGATGAGGATTGCTTTGA
CAATGATGGATTGAACGATGAAGGTGACAATGAGGAGCCATTATGGAATC
CAGGTATTTTGTATTGCCTCGATTATCAGTTGATCTTCTCCGGCGCCTTA
CTTATGTCAGAAATTTTATATTACTATGTTAAGTTAATTTCTTTGGCTTC
GGGACCCATTTGCACTTTTTATTCTCTATTGCACTTTGTAATTATGTAGG
TGCCCAAGGTCTTGTGTTCAATCCCTGGCCAGGTGATACCATAGATTACC
AAAGTGGCACTTGATGTCTACTCAGCAATTAATTCCAGGGAGAAAAGGAA
GGCGCCCTTCCCTACTTTCGGGTAGATAGCTATCGAAAGAGGAGCCGTTG
GGTCGCCTCCATTCGCCAAACTCTTACTTTCTTCTGTTTCTCTTTATGAA
ATGTCTTTTTTACTTTTGTCACTCTTTATTATTGCGAAACTTGATCTCTT
CTCTTATTCCTTTTCAGACTCGTCGATCATTGAACAATGTCATCCACAAC
ACCAGCATAAGGAGTTTCATATGGATTATGACTTGGTATTAAAGAACATT
GGCGAATTGAACGAGATAGCAGGTGAAGGACAACATTTCATCAAGCATAC
TAAAGATGGCGCCCGACTACAGGTATTGTATTTGTATATCATCTTTGCCA
GTGCAGTCACATATTGTAGTAAAGGAAAGAAGCTGATCCTTTTTTTAAAA
CCAATTTTGGGCTTTCGTCAGACAGCCAGAAAAAAACTTACCCCTCTGAT
GAAAAATTCGGAGCAATTGTTGCATTGCAGCCGCCTGAAAATTGTTGCTG
TCTAGCCATCTAAAAAAAGAAACCAGGAAAAACGTCAAAAAAACATTCGA
ATTACAAAACATTCGAATTACAAAACATTCGAATTACAAAACATTCGAAT
TACAAAACATTCGAATTACAAAACAGTCGATTTCATCTAAAACATTCGAT
TTTCGAAGGTCCGACGTTCGAATGACGTAATAAGATTGGAATGTCAGATA
CATCGTCAAAAAAAAATGGAGATTCTTCTGCAACAAAATGAGTTCAAATT
TTTATTGCGTTGCAGAGCAATTGCAGAAAAAATTGACGTGCTACATTTTG
CAATTTCTCGCGCGCTTGCAACGCAACTGTAGTTGCATTGCAGCCGCCTG
AAAAAACTATCAGTGTAGCCTTAGCTTAATACCCAATACCACAATTTTTT
TAGAATTTTAGTTTTTAAAACTATATTCTTTTTTTTTATAAGAATACACT
TTATAAGAATATCCATGATGAAAATAGCCAAAAAAATTAAGAATATGCTG
AGAATATCACCATCATGGAATTTAGCTACTCAAGCTAAGAATGCCATTTT
TATAGCATTTTCAATTATAAATTGTCAATTACCCCCAAGTAAGGTTCACC
CTTTTCACAAAAATGCCATTTTATGCTTGAGACGTATGTGAATGAATTGG
GATCCTAACCTAAGAATGCTGAAAGAATATTTTAGATGATTTTCCTGAAA
AAGCTAATTTTATTCAAAATTTTCGATTTTTGGGAGTTTTTAATCCCCAA
AAAAATGTCACGCAATTTTTGTACCTGTTCTTGAATATATACATCTTATG
CATTTTGGATCTAATTTCCCGCATAGGTGAAAGAATCGGTGCCGTTAATT
TTGTATGCGAATGGTATCTTCATGTTTGGTGGACCATTTCGTTCGTTTGA
AGAAAAGACCACACAGGTAATTTCTTTTTAGTCGAGCCAAATTATAATGT
CATTTTTCTTGGGTCTTTGTTATTATGTAAAGATCATGCCGAAGATATTT
GAATATTCCATAAAGGATAAAGATTTTGAGGTCAAAGCAGATCCGACAAT
CATATTTTGTGATAATGAATGGAAAACCTGATTAAATCATTAAAGTCAAC
TTCAAATGGGGCAAATTTCTGCTTTCTTTTCAATTGTTATAAAGTTTTAT
TCTGCACTAGAGTATGTATCTTACATTTATTGTTTTGTAGTACGGCAATG
AATTTTGAAATTAGCCTGAGATATCAAGTTTGTGTACAGACTAGTAAAGT
TTCAGTCATTGACTTTAAAGCCCCAGGCAAGAAAAAGTGAAGCCACTTAT
TTCCCATGCAGAACGCGCCGCAATCATGACGACGGATTGTATCTAGTGGT
TCCTTTGTTTTTGAGGACTGCTCTTTTTGAAATCTATAGCGGTAGACTTT
CAATCCGGCGTTTGTGTAAAGACTATGCGCGGGCGTTCTAGATGAGAAAT
AAGTGGCTTCATTTACCATCCAGGAGTCTCGAGTCTAGCCCTTCGGGCTT
GGAAGTCAATGGTTACAGTGGTACATAATTTCTATTTTAGATTTGTATGA
AAGATTTAATGGATGGATACTTCCCAAGTGAACTTCAAAATACTTACCCT
GACGGTGTACCTTTTACTGTGAGTCGTCGCTTTTGAGTTCGCGAGGTTCA
AGCTGTAAATGTTCAATCAGGTTCAATGCCTTATCTAAATTTGAGGGTGA
ACTATGCTTAAATGCAATAAAGCTTTAATTGATGTTAGCGACACCAGAAC
TGCATTACTCCTAATTCTATCGCTTCTTTGTACCATGACACCCGTGTACA
AGCCAAAATAACCAAAACAGGGTAGACTGGAGTCGTTTATAATGCGTGTA
ATACTAATAATACCAATACTAATAATAATAATACGGGATTTAGTTTGTAT
AAACGACTGGAAGAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCGATATTGACACTTTTCTTTTGTTTGGAGTTAG
TGCACAAAGGTTTCTAGACGACTAAAATTGTTCCATTCATTACTTTTTGC
TTTATTTCTACTATGTAGTATAAATTAGTCGTCTAGCTTGCTAGACTAAA
ACAGGGCCAGTTTACACCTACACACCCCTTCTCATAATGTTATGAAGTAA
CACAATTAAACTTTTTTGTTACCAAATGTTTGTCTTTTCATCTCTGATAC
ATTCTTTGTCTTTAGACGTGATATAGTGAATTCCCAAAAGTTTTTAAGTG
TAGTCCTTACGCCATCGCCATCATGAAATCAGAAATTTCGGATTCAGCGA
ATGGCTTTTTGTCGCCTGGCCAGGTTTTCCGGGATAAAGCCTAAACTAAC
TAAATTTCTTTCTTTGATTGAATTAACATTTTAATCTGATATTGAACAAT
TGATATAGAAAAACATAACTAGTCGGTAAATGGATTTCGATAGAAATTTA
CATCATTTTTTTGTTACCTTCAGGTGACAGATAAAAGAGACAAAACTTAT
CGCGATAAACGGATGGAGAAACTATTCCCTGGTCAAGGTTATTTATTATC
GCCAGAAAAGTCCTCCCCGACCACGCGTAATAGTGAAGATAGTAAAGAAA
ATGATGGCAAATCAAATGAAATTAATAGGGTAGCAATGGAAGAAAATCAA
CGTGAAGGTTTGTTTTATTATTGGGTTTTTAATTTGTTTTTCGAAGACGA
ATTCTATCTGGCTCGAAAGGTCGGGTAGCTCCAGTAAGTAGAGCATTCGC
CTTACAATCCAACAGTGTGGGTTCGATCCCCGGTTACCGCTAACTCAACA
AATTCGAAACTTGGATGGGTAATCTGATCTAGGCGGTAAGCTACTGGGAG
CATAGAATAGGTGGTGCTCCACCTCCTCAGCATTTGAATTTGATCTCCCA
GGTCTAACGCAAAAAGGAAAGGGGATAGACTCCCTCATTCCAAGCTCCGC
CGACAGCCAACAGATGAATATACTTACTTATTACAAAGTTGAGTCTTTAA
ATTATAAACGATTTGCGGGGTCCCTGGGAGAACTTTTGACTAATGTCACT
CATTTACCTCTGAACTCTCCTTAACTCAAACGATAAGTGTTATCCTTGGC
GAGTCGAATGTATTTCTTTGCCTCAAAAGTAACCAATTTTGGATATTTTG
ATAGGGTGGTCTTTTTGCACAGTTTTCGAGAGCTAATTTTTGCCAGTTTT
TTTCAATTTCAACAAAATTAGCTCTCCCCAAAATAAGTTTATTTTAAGTC
TATGTCTTTTACTTTTCAGGTCCAAAATACAGCACTGAAAATTTTCTTTC
TAAGCTGCCATCGTCAGTGTTAAAGAATGGGAAAATCATTGATATTCTTG
GCGATCTGAGAGAAAGTTTGCAGGTATGTGACGTTTTGTTTAATAGTTTT
CACCTCGTCGGAAACATACACTTTATGTATTCGGTATTCATGGGGATTCA
CACCTTGTAAAGAAATCACACTTGATAATTATGAATAATCAGAAGGTCTT
AGTACAAATAGTGGAGAGAACATCCTCCACATTGCCCAATGATGGGAGAA
GAATCTCTCCAAATGTACACAAGCGTAAATCTCGTGATCCAAGCCACGAT
AAACTTCCAATATGATATTCGGTATTCGTTCCAATTGAGAAAAATACTGA
AATTTTGGGAATTGATATCAGATTTTCGAGCGGGGAAAAATAGAATTTGA
AACCCAACCCATCAAATAGAAAATCTTGGTCTCAAAGGCATTTAGCTCTA
CGTTCTCTGATGGCAAAAGATTTTTCGCTTAAGCACGACAGTCAATGATG
GATGTCCCCTGGATGTCACAAAGAGCCCTAGAAAAGAGAGCACTGCGCTC
GAAAGGGAAGATTCTTCTAAATGGGAAAAAAAATCAAGCTAATTGTTTCC
GTTCAGGAAATTTAGAAATTCTTTTCATTCGTGGTAGTGGAAGGGGCTGA
CTGGGGGTACTTAGTTAGCTCTTTCATTTTCTCCCATCCCCCCCCCCCAT
CTTCTGATTTAAATTAGATATATTTCAACTCAAAATGGTAGGGGCTGACT
TGTGGTACTTAGCTCTTTCATTTTCTCTCCCATCTTCTTCTGATTTAAAT
TCTGATATATTTTCAACTCGAATCTCAAATTGTGTTGTATATTTTTCAAC
AGGAGAATAATCAATCGACAAAACACAACGTGGTAGTCATCGAAACTGAT
GTTGTCCGAAATATGAAATCTAGGTAATGAAAATTTTAACAAACTCAAAG
TTCAAGATGACTTTTCCCTCCAGCGGGGAACTACTCTCGGGTACCTAATA
GCCGGGGGGGTTGGAAAAAGCAGGGGGTTGGAATATGACTGTCCAATTAA
TTAGCGGGCCCCCCGGCAATTAGGTACCCGAGAGTACCAATCCTACCATC
ACTTCTACCTAAGAAACTCCAGTCAATTTTCTTTTTCTTTTGATGACTGG
TCATTTTTGATGATCAGCCTTGCAGAATTTCCTGTCACTTATGCACTACA
TCTGCAAACTAACTTCCTTTGTTTGTTATACAGATTGACCAATGGTCGGA
GAAGTCGCCCACAAACACCGTCCAATATTACCACTCTTCGAATCAAGTCT
GAAACTGGCGAAGAGGTTAGCCTTCTCTACACTCTTTTCATATTCTAAAG
TTTATTTAAAAAGTAAGGGAAACTCTACAAACTTTTCCTTTTCATATAAT
CTAACATAATTATCACTCAAATCAATGTTAGTTATAAAACAAATCTGTTC
TGGGATTTGGATCGGTTCGAATTTCGGTGTTGATATTTTTGCTTGTGCGG
TTTGATTACATGACATTGGGAGATTTCTTGTTCTGTTGAGCGAAACAAGC
CAGTTTTTGAAACAGTTCAATGCTTTTTAAACAAACGTGTTTCTCCTTTT
TTGTCAAAAGTAATTTGAGTTATTCCTATCGCCTGTATATATACCTTAAG
GGAAGAAATTTTCGCGGGAATTTAATTTCGCGGTTGGTCAAATTATTTTT
TTTCGTGGGAATTTAATTTCGCGGTTGCAGGATTTTTTTGGCCAAAAGTG
TTATTAAATAACCAAAAAACCTGTTTTAAGGCTTGAAATAGTACGAATTT
AGGGGAATGCGTGAAATAAATTTAATTTCGCGGAAATTTAATTTCGCGGA
TTGACGATTTTGTAAAATTTCGCGGGAACTTAATTTCGCGGTTTTAGGCA
AAATAAATAAAATACCCTTAGGGTATATGCATTCTACTTTGAAAGGATAC
TGTAACTTCAGTAACAAATATTTCATCTGTTGTAGACGTACGTACTGAAG
ATGTTGTAACAGTAACTTCAGTAACAAATATTTCATCTGTTGTAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_004908	XLOC_004908	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000087	supercontig	sc0000087:70851..80495 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
27.3116	26.8592	13.8364	12.3929	16.4289	15.5297	14.7279	14.5181	13.4061	12.9605	19.1666	14.7685	5.35971	5.10804	7.64846	9.62291	7.33967	8.58104	6.95505	6.25701	5.19149	5.75694	19.212	15.5367	23.4054	21.5386	0	0	8.74009	12.1909

Blast

[Close]

BLAST of TCONS_00008756 vs. Swiss-Prot (Human)
Match: UBX11 (UBX domain-containing protein 11 OS=Homo sapiens GN=UBXN11 PE=1 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 9.850e-57
Identity = 139/449 (30.96%), Postives = 221/449 (49.22%), Query Frame = 1

Query:  391 MSSPLSNLKNKKRTPLKQ-----GSRTAPFKPKEFHEDDLLDQVYSTEGEKYKASHG-----VNRSSPVT-NGDLMKSMMSRLTAAEKGLTEAEQRNKEKDKKIRILEEKCEIYKKAQGYGSNQVLE-LERKCHKLQRQIHSMENFLEDYGMIWVG--TNDSSDEDCFXXXXXXXXXXXXXPLWNPDSSIIEQCHPQHQHKEFHMDYDLVLKNIGELNEIAGEGQHFIKHTKDGARLQVKESVPLILYANGIFMFGGPFRSFEEKTTQICMKDLMDGYFPSELQNTYPDGVPFTVTDKRDKTYRDKRMEKLFPGQGYLLSPEKSSPTTRNSEDSKENDGKSNEINRVAMEENQREGPKYSTENFLSKLPSSVLKNGKIIDILGDLRESLQENNQ-STKHNVVVIETDVVRNMKSRLTNGRRSRPQTPS-NITTLRIKSETGEETYVLKM 1689
            MSSPL++L   ++ PL       G R       E   D L D   S E     + +G     V+R  P + + +LM  M  +L   E+ +         KD+KI  LE+  +  +      + Q  E LE  C +LQRQ+  ME FL DYG+ WVG   +    E    ++    +    +  W P  S+              +D+D +L ++ +L+E+  EG   +     GARL+  E +PL LY NGI MF GPF+ F + +TQ C++D++DG+FPSELQ  YP+GVPF V+D R++ Y +  ++  FPG+G ++                        ++RV     +  G + + E FL++LP  V++ G++IDI G +R++LQ       +   +V+ET  +   + R     +  P TP+  ++ LRIKSE GE+ ++L M
Sbjct:    1 MSSPLASLSKTRKVPLPSEPMNPGRRGIRIYGDEDEVDMLSDGCGSEEKISVPSCYGGIGAPVSRQVPASHDSELMAFMTRKLWDLEQQVKAQTDEILSKDQKIAALEDLVQTLRPHPAEATLQRQEELETMCVQLQRQVREMERFLSDYGLQWVGEPMDQEDSESKTVSEHGERDWMTAKKFWKPGDSLAPP----------EVDFDRLLASLQDLSELVVEGDTQVTPVPGGARLRTLEPIPLKLYRNGIMMFDGPFQPFYDPSTQRCLRDILDGFFPSELQRLYPNGVPFKVSDLRNQVYLEDGLDP-FPGEGRVVG----------------RQLMHKALDRV----EEHPGSRMTAEKFLNRLPKFVIRQGEVIDIRGPIRDTLQNCCPLPARIQEIVVETPTLAAERER----SQESPNTPAPPLSMLRIKSENGEQAFLLMM 414

The following BLAST results are available for this feature:

BLAST of TCONS_00008756 vs. Swiss-Prot (Human)

BLAST of TCONS_00008756 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
UBX11	9.850e-57	30.96	UBX domain-containing protein 11 OS=Homo sapiens G...	[more]

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TCONS_00008756 (transcript) - C. hemisphaerica