TCONS_00008764 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008764
Unique NameTCONS_00008764
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2860

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008764 ID=TCONS_00008764|Name=TCONS_00008764|organism=Clytia hemisphaerica|type=transcript|length=2860bp
CTCGTAATGACATTTTTAGCCAATAGACCCACGGATACAAACAATTAATG
AAAACAATCAATACTCATTCAAAAATATAGATCGTGGcaacaacattttt
tttgaaactttatttcaaatttgataacAAAGGAGTTAAATAGTAATCCT
ttacatttttgatatttttttctagaaGACAGACACGAAGAGAGAAAATG
GTTGGAAGCATGAAGTGTTTATTTCTTATCATTTGCTGCTTGGTGTTGTT
AGAAGCCTGCGTCGATTCACCGGGTAAAGATTGTTGGGAAGGTATGCGAA
AGCGTAGCCCGCCACGTCACTCAAGATGTTGCCGTCTTTCAAGACGATAT
AAGACATTATTCAAGCGACGTGATCGACAGAAACGACAATGTCAACGTGT
CGTTGTCGCTCTTAATAGCAAAGTTGACGGGCTGAAAGAAGCCTTAAATG
ACCAACAGATTGTCGTTCGTGTTATTCCTGCAGACACTCAGCAACCGACT
GTCGGACAGCTTGTAGAAATTCGAGATCGCACGGTCGCTCTTCTAAACAA
TGCTCAGTTTAGAAATAGAACTACTTCGATACCACCTTTaacgacaacaa
caacgacTTCACAAACGACACGACGGACTAAATATCCgacaacaacgaca
acgacTTTAAAAACGACAAGACCAACCAAAtatccaacaacaacaactac
gACGCAGAAGAATACACGATATCCAACGACAACAACTCGAACGACGCCGA
CTCTACCGTCACCTTCGGATCTTTGGTATTCAGTACCCAAGTATAAACTA
ATGGACGATACTGATTCATATATAGACAGTAGTGACGAGTTtattaaaga
actttttgaGGGTGAAGAACAAACttctgatgaagaagaaaatgaagagg
aaGATTTCAATGAAGATGATGAACGAAAAAGAAGACGAAGAATGACTCAG
ACATCAAGACGAACTTGTCCGACACCTCGACAATCTTTATACACCATACC
CAACCTACCTCCTGGCACAACATCCACTTTCTTGAGCACTAGAGAATCTC
TTGATGCCATTGGTAGCATATTGGTCAGATCGTGTGCTGAATGTCATTAT
CAAATCAATTTACCTGATGGTTATTACCCACGTGAGCACCGTCACGTGAT
TTGTCCGCCAGCTAAAGTCAATTGTTTTGCCGGTATCGGAAAGTGCGCTA
AGAATGAAGTACTGATGACAATTTTCAAAGATACGGATAACGATTCAACA
AGATTCGATTGGGACAGTAAAGTGAATATCATTTTCAACAAAGGATGTGG
ATGTCAAATGCTGGCTGATTACTCATTTATTGGAGATGGGAATTAATTGA
TATCGCCATTTTCAAAGACAAATTTATGGGTTTACgaacatagatttata
aagcccaatGTCTGGATGGCTAGATGNTCGCCATTTTCAAAGACAAATTT
ATGGGTTTACgaacatagatttataaagcccaatGTTGATGACTAGATAT
CGTGAATATCGGAAAACATGTTGTTGCACtagcttttgattggtcaagcg
ctgaaattctattgtaatgtcacgtgacttaggtaggatttcctacctag
ccACAGCACACTTTTCAGAAAAAGTACGcaatctagctcttcgggcttta
taaatctatgtttACGAAGGCAGTTATGAGTAAGGTTTTTAGCCTATCCT
CTGCAAATTTCTGTTGTTTTAGAATTTTATGTTTACACttcaaaaaatac
tttaatcCTGAATCCAGAAACCCCTTGTAAAAAAGGGTGATTACAGTTTT
AGTAGGGGGATTAAAAATCGTTTTGctcttatattttttgtttgttaaca
TACACTANGGGGATTAAAATCATTTTGCTCTTATATTTTCTGTTTGTTAA
CATACactatttttcaatttaattttccaAATCACTAGATTTTTAAAACG
ATATAGCTACAAGACAAATactaaagtttttattttttctacgaaaattg
atttataacatttaaaaataaaccaaaattacaaaatttcatcACAATTT
ACAATGATTGTTGACAATATCTACTCTGTTACAAAAATTTGTATGCCCCA
GCGTGCCGTCTGAAGTGAGGGACCGAAATTTGCAGGGGAAAATTGTTGTC
GGCgacagagaaaattttgactatttGCACCTTCTAAACATCACAAATAG
CCATTGAATTGGGTAAAAAACAGGATTATGATGTCTGTTAACAGGATTTT
TATCCTGCAAAAAAAAGGGTCATGTACCCTCCCCTCACGTCAATCTTTAG
AGTATTGCTTAAAAACCTAAACTTTGTTTTTGTAATGAGTACAGTACTGC
TTTTTAAAAGGACCCCATTCTTTGATTcaataatttataaattttggGAA
TGTTTCATCTTATAGATATCATCATTCATCTTAAGTCCCATCCACATGCC
TCAAAATCGGAATCAAAATAGTGACCGATTGGGAAAGACTAGagttctga
aattttcactggATATTTGTTTAAATGTTCTCCGTTCTccatcagaaaaa
aaaaattcctgtcTTTAAACATCATCAATTTTTCTTTGCAACTTAATAAG
ATAAGCATTTTTAATCCGATAAATCCGATAAATCCGATAAAAGATCACCG
CCCTTTGCCCCTCCCCGCACGGGGTTCATTGTATGGTAGTATTATTTGCC
GTTGTCGAGTATGTCAGACGTCAGACAATGCGTACAAGTTTTTAAACTCC
TGAAAACGTTCATGTTTGTAAAGTAATTTAAAACGTTTGACCATTTTGGA
TTTATCCCATCTTAATGAAGCGTagtaaaaagcaatttttgaaaTCCTAG
AGTGGAAGTa
Run BLAST on NCBI

protein sequence of TCONS_00008764-protein

>TCONS_00008764-protein ID=TCONS_00008764-protein|Name=TCONS_00008764-protein|organism=Clytia hemisphaerica|type=polypeptide|length=382bp
MVGSMKCLFLIICCLVLLEACVDSPGKDCWEGMRKRSPPRHSRCCRLSRR
YKTLFKRRDRQKRQCQRVVVALNSKVDGLKEALNDQQIVVRVIPADTQQP
TVGQLVEIRDRTVALLNNAQFRNRTTSIPPLTTTTTTSQTTRRTKYPTTT
TTTLKTTRPTKYPTTTTTTQKNTRYPTTTTRTTPTLPSPSDLWYSVPKYK
LMDDTDSYIDSSDEFIKELFEGEEQTSDEEENEEEDFNEDDERKRRRRMT
QTSRRTCPTPRQSLYTIPNLPPGTTSTFLSTRESLDAIGSILVRSCAECH
YQINLPDGYYPREHRHVICPPAKVNCFAGIGKCAKNEVLMTIFKDTDNDS
TRFDWDSKVNIIFNKGCGCQMLADYSFIGDGN
Run BLAST on NCBI

transcript from alignment at sc0000087:156558..169733-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008764 ID=TCONS_00008764|Name=TCONS_00008764|organism=Clytia hemisphaerica|type=transcript|length=13176bp|location=Sequence derived from alignment at sc0000087:156558..169733- (Clytia hemisphaerica)
CTCGTAATGACATTTTTAGCCAATAGACCCACGGATACAAACAATTAATG AAAACAATCAATACTCATTCAAAAATATAGATCGTGGCAACAACATTTTT TTTGAAACTTTATTTCAAATTTGATAACAAAGGAGTTAAATAGTAATCCT TTACATTTTTGATATTTTTTTCTAGAAGACAGACACGAAGAGAGAAAATG GTTGGAAGCATGGTAAGTGAAATTCTTTTATTTGTCAGAGTATTTGTGGA AATCTTACCACTCTCTATCTATCTATCTAAGTAGGGGGGCGACTTTCTAC GATTTTGTCAGTTTCATCCACAAATACATCCGAGCTTCGAAAACAAATTT TTGGGGAGAGAGGTGCGTGGAAAATAATTACAATCCTATAATATAAAATT AAGACTTTATCTAATACTCTATCTTCAACTTTTTTAGAAGTGTTTATTTC TTATCATTTGCTGCTTGGTGTTGTTAGAAGCCTGCGTCGATTCACCGGGT AAAGATTGTTGGGAAGGTATGCGAAAGCGTAGCCCGCCACGTCACTCAAG ATGTTGCCGTCTTTCAAGACGATATAAGACATTATTCAAGCGACGTGATC GACAGAAACGACAATGTCAACGTGTCGTTGTCGCTCTTAATAGCAAAGTT GACGGGCTGAAAGAAGCCTTAAATGACCAACAGATTGTCGTTCGTGTTAT TCCTGCAGACACTCAGCAACCGACTGTCGGACAGCTTGTAGAAATTCGAG ATCGCACGGTCGCTCTTCTAAACAATGCTCAGTTTAGAAATAGAACTACT TCGATACCACCTTTAACGACAACAACAACGACTTCACAAACGACACGACG GACTAAATATCCGACAACAACGACAACGACTTTAAAAACGACAAGACCAA CCAAATATCCAACAACAACAACTACGACGCAGAAGAATACACGATATCCA ACGACAACAACTCGAACGACGCCGACTCTACCGTCACCTTCGGATCTTTG GTATTCAGTACCCAAGTATAAACTAATGGACGATACTGATTCATATATAG ACAGTAGTGACGAGTTTATTAAAGAACTTTTTGAGGGTGAAGAACAAACT TCTGATGAAGAAGAAAATGAAGAGGAAGATTTCAATGAAGATGATGAACG AAAAAGAAGACGAAGAATGACTCAGAGTAAGTTGAATTTTATTTATTCCC TTTAATAATGTTTTTACATTCTGAGGGGTTCGGAGGGGTTGAATTTGGTA CAATCTTTTTCTCGAGTGATTTACCCTTCGCCATACTCTTCTTATCGATT AATCTTTTAAGCATTTTCTCTATTTTGTCTGAAACTGATGTTATAAAATA AACCAAAGTGTCCTTATTTTGACATATCCGGATTCATTTTCATGCCTCTT TTGAAACCAACTTTTCTTTCTGTTGATGCGTGAGTATTCTCACAGAGAAT TATGAATAAAATGAAAGAATATAATTATAATCGTAGACCTTCTACAAAAC CGCACGAATCCGTTAATGGATATCAGGAGCCTAGAACGGAACAGTATTGT CTTTGTCTCATAACCATTAACAACGGATTTTTATTCTAAATGCAACAGTC TCCTCTCTACATCAACTATGTCTACTCAGGTCAAAGTTAGATTTCAATGT TTGTTTTCGAAATCGTAACACAGTAAAGCAAGAAATCCCTCACAATTTTC ACATCCTCTAATATTCAAAGGTTCGGCTTCCTATCTTCCTTTTTAGTACC ATCTCGTTTGATTGCTTAGAATGGTTGTTTTTGAATTCTTGCTTAAGCTT GTTAATCAAGAAATTAGCATCAAACGCGTCATTCTTCATATGAATTGACA TTCCTCTACGTGTTTATGTTGTTATACTGAGCTAAGAATCTTCCTTTTTG ATCACTAGTGAAATGATAAAATAAAGTATTTGCTTTTTTTTGCTTGAATT TTTGAGTGAATTACCAGAAAAAATCGACAGTGACAGCATAGGGCTCTTAA TAGTTCAATTAGCGAAATAGTTCAGCTAACTCGATATAACTCGCTTTGAA ATTTTTCCTGGATTTTTAATTTTGTATTTTTTTTGCGCCATCAAAAACGC CGTTAATGGAGTTACAATCACATTTCTTACAATCCAATTCATCACTGCCT TCACTTTTGAATGTTTTTTCTTTTTTTGATTCTTTGAAAAAACTATTCTT TGTCAACAGAATGCAATTCTTAAGTTTCTTCCCTGATAGGCTTTCCACAG GATTTCTGCAAAGGGTTATATGTGATGGGATTCTATTTACAGATAACTTT GGAAATCAGAGAGTTTGAACTAGGAAGGATCACTTTAATCCTCAACACAA GCTAAAAGATGATACGTTGTCATGGGCTAGATTAGGTTACCAACGAGAAA GATTATCTGAAGTAAATCTAGCCTGGATACCCAGACTCAGTGATATCATC GCATCTGTTAAGAATTAGCCGATCTAGGTACACCAGGAAAGATATAGAAT ACTGTAAGCAAGTTTATTGAAAGAGAGTTTAATTTTACGCCTGGGCTGTC AATTATTTTCAGTTTTACGCAACACTATTCCCTCTTCAGTGCAATTAATC AATCAAAACCCAGGATGAGTAAAAGAAACTAGATCTTTAGACCCAAGCAT ATGTCTACAATCATGGTCGTAATATTTGAGAAAATAGGGAAATTCACCGG GAAGTTTTTAAACCACAATCGATTTGTAAATTCTCTAAAGTAGGTTGGAA GGGTAGAGTTTTAACTCTAAGTTTTAACATGAGACCTAATATCCAAAAGT TCAAAAATGGTCCAATAAGGCTCATAATATAGCCTGGAAGTCTATAAACC CGAGCTAAATTGAAATATCCGATTAAATTTAAGAGATGGCCCAAAATCGA CTTTCTCGCCCGAACTCCAAATTTCGAAAAACGAAGAAATAAGCTTAATT CTCAAAAGATTTCGACCATGATTGTACTCTAAATTCGCTCTTTTAGGAGA TTGACTAATTAAGGCAGTACTTCGCAAGTTACGAAACTAGCAAAAATGCT CATTTGTTTCCTTGTCATTAGCTATCCAATTCATCAACTTAATTCTTATA ATAGTAGCTAAATGATCAATCTATTGCCAACATAATTGTCTAATTGATTT GTTAGCGAAAATAATATTTGAATGCCAATTTACCACACCTTTGATCGACG ATGAGGAAATTGCTTTATCCTTCCGTTCAACGATGTTTTCGTAGTCGTTA TTTGATTGCTCAATCTTTTTTCACTTAATTAACGTGGAAACTTTCATCTA ACGAGAAGCAGTTACATAAAGAAGAGACCTTTTAATCGAACTAAGCCTAG TTAGCCCCTTTAGCTCACCTTTCTATGATAACCCTTATTTAAGGTTGCAG CATCATTTCCCATAACGATTTATCGCACCCATCAGTAAAATCAAAAAAGT TGTACATAGGGGTCTAGGTACGAGATTGCTTACAAGTGATAAAGTGAATG CAATGCTACCAGTTAAAATCACCAACAATAGAGTGATGGTTCTGAGAAGT TTTTACAATCCAGCGTTGATCCATTAACGAGTTAATGTATTTGAACTTTT GAGGACGCCGGAGTGACTGAAGCGATTTGGAATAACCCGTAGTTCTGACA CGCAAAATCGAGGACGGTAAAAGTGCTGATTTACCGCCGTCCTCGGCTGG TTAGGATCTAGTCAAATTAGAACCTTATCGGCCCCGTCACAGAAAAACAC ACATACATAAACTCGGTACTGTACCCGAAGAAGGTGGCATGAAATTTCGC CTGGAAAATATATAAACAATGTCTTATAATTTGAAAAAGGTGCATCACCT AACATTATCCAATTTCTATGCGGAACTTGAAGAAACCTCACTGGAATACA AAACATGATTCATCATTTCATAACATCGGATCAATATTAATGTTCCCTTG ACTCGACAAGGAAGCTCCTTTATTTCCAAATTGAATCAAACCACAATTTA TTTCTGTAATAAATTCACCAGCAAATGTAACCCACAATGCGGTGATGTGA AAAGTTATAAAAAGTAAAAATGTTTGTCTGAAAATTCTTGATTCAGACAA ACATTTTTACTTTTTATAACTTTTCACATCACCGCATTGTGGGTTACATT TGCTGGTGAATTTATGTATGTTTTTGCACTTTTGAGGACGTCAGAGTGAC TGGAGTGGTTTGGAATAGCCCGCAGTTTTGACCCGCAAAATCAAGGACGG TAAAAGTGCTGATTTACCGCTGTCCTCAGTTAGTCAAGATATAGACAGGC TTCCCAAAGTGCCATAATCTGCTCAAATTCGGTAAGCTTTCTCTGCACTG TACGGACCCCTATTTTACCGCGCATAGCGTCGTTTTCAAATACATTGCCC CCCTCCCGGAGTAAGAACAAAACAAATTTTTTGTACCTTTGAGTGAAAGT ACTATTTAATCCCCCAATGAATTATTTTTTTATTCCAGCATCAAGACGAA CTTGTCCGACACCTCGACAATCTTTATACACCATACCCAACCTACCTCCT GGCACAACATCCACTTTCTTGAGCACTAGAGAATCTCTTGATGCCATTGG TAGCATATTGGTCAGATCGTGTGCTGAATGTCATTATCAAATCAATTTAC CTGATGGGTGAGTATTTTGAAAGTGACATTGACAATAAGACCATATTCAC ACGTTACTGTTCCGTTTCGCTCCGGTATGATTCTCGTTACGGATTGAGTT TGTTCATATTAGTTTCGGAACGTTTCGGAGCAAGAAAACGGAGTAGTTCC GTTCCGATGAAAAAAGTGGAGCGAAAACGTTTCGATCTGTTTTGCTTTGT AACATTATATTCTGACGTTTCAAATTTTGACGTTCACACTTGTTTCGAAA CCGTTTTGGAACGGAGCAGAACAGAACCGTCTGAACGTCTGAACACGGTC ACTTTATTCTTGTGAACCTGGACATTTCCAAATGTTTGAGACGGAGTAGA TCCAACGGAGTTCTAATCAAAGATGGCAACGTGTCATTGTATCAATTTAA TCAACTAAACCTTTCCGGGGTTTTTAGCTAGCAAATCTATTTGATCTTTT TAATGATAGCGACAGTCACTATTACTGTTAACTATGACAGTTACTGCTAC TGCAGCTTCAAGTCCTGAATGACTGAGAGCAAAGCTTAAGAATGAATTAT GGTGCGTTCAAGCCAATGATAAAAACTAAGCAATTGTTAAAAAATCATTG ATTAAGAACAGATTAGATTCAACTTATCATAATATGTATTGTATATTGTT TTCGCTTTTAGTTATTACCCACGTGAGCACCGTCACGTGATTTGTCCGCC AGCTAAAGTCAATTGTTTTGCCGGTATCGGAAAGTGCGCTAAGAATGAAG TACTGATGACAATTTTCAAAGATACGGATAACGATTCAACAAGATTCGAT TGGGACAGTAAAGTGAATATCATTTTCAACAAAGGATGTGGATGTCAAAT GCTGGCTGATTACTCATTTATTGGAGATGGGAATTAATTGATATCGCCAT TTTCAAAGACAAATTTATGGGTTTACGAACATAGATTTATAAAGCCCAAT GTCTGGATGGCTAGATGNTCGCCATTTTCAAAGACAAATTTATGGGTTTA CGAACATAGATTTATAAAGCCCAATGTTGATGACTAGATATCGTGAATAT CGGAAAACATGTTGTTGCACTAGCTTTTGATTGGTCAAGCGCTGAAATTC TATTGTAATGTCACGTGACTTAGGTAGGATTTCCTACCTAGCCACAGCAC ACTTTTCAGAAAAAGTACGCAATCTAGCTCTTCGGGCTTTATAAATCTAT GTTTACGAAGGCAGTTATGAGTAAGGTTTTTAGCCTATCCTCTGCAAATT TCTGTTGTTTTAGAATTTTATGTTTACACTTCAAAAAATACTTTAATCCT GAATCCAGAAACCCCTTGTAAAAAAGGGTGATTACAGTTTTAGTAGGGGG ATTAAAAATCGTTTTGCTCTTATATTTTTTGTTTGTTAACATACACTANG GGGATTAAAATCATTTTGCTCTTATATTTTCTGTTTGTTAACATACACTA TTTTTCAATTTAATTTTCCAAATCACTAGATTTTTAAAACGATATAGCTA CAAGACAAATACTAAAGTTTTTATTTTTTCTACGAAAATTGATTTATAAC ATTTAAAAATAAACCAAAATTACAAAATTTCATCACAATTTACAATGATT GTTGACAATATCTACTCTGTTACAAAAATTTGTATGCCCCAGCGTGCCGT CTGAAGTGAGGGACCGAAATTTGCAGGGGAAAATTGTTGTCGGCGACAGA GAAAATTTTGACTATTTGCACCTTCTAAACATCACAAATAGCCATTGAAT TGGGTAAAAAACAGGATTATGATGTCTGTTAACAGGATTTTTATCCTGCA AAAAAAAGGGGTCATGTATGGTGGCCCATCGTTGTCAATACCTTTTGCTT TCATTTTGTCCAAGGAAATGAAATTAAAAAAAAAAAAGTTTGAATAATAT GAATAATATTAGAAAAACAAAAAAAAAATTTGGAAATGTCTACTTTAATA AAGAAAAAAAAAGAAAAAGATATTTCTCGCTGCAAAAAAAAAATAAAAAA ATATTTAAAAAATAAAATAAAAAAGCATTCGGAAACATAAAAAATATATA GCGGAATAAACAAAAGTAAAATAATTCACGTAGCCCAGCATCGTCATCGT CATTTATTTATCTCCATAATATTACTGATCTAGATAAGCAATTGAATGGT GAAACATGTGCGGTACTTTTCAAAATGGCGGATGTGGTTGGTGTGGTTGA TGACTGGAAAGCAAATGAATTGCTTAAAACAGATCTTCAAATGCTTGTAA AGCAAAACCTTCTGCGCAAAGAAATATTAGATATTGTGAGGAAAAAACAT CCATTGTATCCATGGAGCCTCTCCACTTTAGACCGTAGGTTGAGGCATTT TAAGCTCAGGTTCATTGACAGGTCAACACCCTTAGAAGCGGTAAAAGATG CTGTCGCCAAAGAACTACAAGGCCCTGGCAAGCTATTGGGATATCGTGCT CTTAACAACAAGCTTAGAGTGCATCATAACATTCAAGTACCAAGAAATTT AGTTGCAGATGTCGTCTATGATCTTGACCCTGAGGGGGTTGCTGCTCGGA ATGTCAAGAAGAAGCAGAAGAAACCCAAAATGCCTTTTGTATCAGATGGT CCAGGCTGGATATTTTCGTTGGATGGTCATGATAAATTAATGGGTTTTCA GAATTCTACCTTTCCCGTTGCCATTTATGGTTGTCTTGATTGTTTCTCTA GGAAATTAATGTTTATTAAGGTATGGGACTCTAATTCAAGTCCAATAACC ATTGCCAAGTTCTACATGGATTATCTTCTGGATACCAAAGCGATACCTAG ATTTTTAAGAATTGACTGTGGTTCAGAAACTGGTGACATGGGAGCTATTC AAACCTATCTAATGGGCGAACATGGTAATTTTGCTGACCCAGCTGATTCT GTAGTCTTTGGGCCCTCAACCAGCAATAAAATTGAGCGTTGGTGGAGAGA TCTCCATGAAAGAATGGAGCTATTTAGGTATCAAACACGAATTACGAGAA TTGTTACATAGTTGCAACTATGACCCATTATCTCAGCTAGATAGAGATTG TGTGAAGTTTATATTCATCCCTGTTGTTCAGCGTGAATGTGACATCTTTG CAGAGCTGTGGAACTCGCATCGCATCCGTGCACAAAAAGGTTTAGAGCTA CCAACAGGGGTACCTGACCACATGTTTGCTTGCCCAGAACAATTTGGATG TGAAAGGTATTTTGTTGACGTATCAGAAGATTCCCTTATCGAAGTTGGTC GATTGGCAAACCTTGACTTAGCCCCTGTTGATTACCTCTCTGCTGAGAAC AGGGAACTTTTCACCACCATAATTTCTAATCCTGGTGATATTCAATGCAA AGATCTAGCTGACAAATACTTGTATTTAAAAACTCAACTAAGCCATAGTG CTTAAGTCATTTGCAAAGTTGTCTTGGCTGCCTAATGTTGATAAATTTCT TACTTTGATTTCATCAATCTCATGTAACTTTTTTGCCTGTAATTTTCAGC TTTTTCTTATCTTTATAAACTATACAAAACTGTGTGAGATTACAAAAATT TATACAAGCATTTTTAAAAATAATGACCTCATTGGTCACTATAAATTGGA GGTGATGATACCTGACATTGATGAAATTTACCCTCTTACACAGTATGCTG TATGAAATTTTTATTTTTTGTCAAACAAGGCATTCCAGGGTATTTTAGAG TCTTAACCCCCACCTTCTTGGGCCACCCCTCCTAAATTCTGAAAAATCTT CAACCCCTACCTGTTTCAACAATTTTGAAGGTAAGGATTTCTCTTTATGT CATGATATAATAATAAGGGGATTGAGGGGGTTCACATTATGTATTATAAT TTGCTTTTTGGTTCCGCATTTTTTGGGCTAACTCTACCTTATGTGCGTGG ATTTACAAACTTTTTTATCTTTATGAGTGTGGAAATACATTTTTATAGTG TGAATGCCTGTAGCCTGTTTCTTTCTCTTAAAACGTAAATCTGACTTTGC CCTGAATCTTCTGGTTGTTCCTGCGAATTCAAAAAAATTTTGTTTTGCTA ATTTGGATGTTAAGATTAAGTTCAATGTTAAAAAAAAGTAGTATAACCTT CACTAATCCTCATTGGCATCTTGAAGTCTGAGTTTTAGAAAAGGACCAAA ATCTTCTTACTACTTTGCGTACCATATAAATTCCTAGAATTATTAATCAA TTTTCTTATATTTTAGTGTAAAAATCAGATAAGAAAAATGAATAATGAAG AAAAGTGGAAAGGCTATCGCAGACATATTTCTAACAAGCGCACCGGAGGA GGAGACAACAAAAATGTCAAGAAAGTGTCCACGCTAATGGTTCAAAAAAT GAACCCGGTTCCTGTTGGAAAATTGAAGAAGTATGAACCTGAGAGACCTA GAGATTTCATCGATTTTTCTGCATTTTCAAAATTAACTTTAAAGAACGTA AAAGATGCATGTGAAAAATTTTATAATGAACTGCCAGGCTCTTGTGACGT TTTGTATGATATTACAGGACCTTCATGCACTAATGATGAGCAAGTTTCTG GAATGAAAGTATTCCGTGTGCGTTTTGTGAATCCTACCAATAATGACCAT TTGCTTGAGCCTTCTTCTTCAAAAGCTATCAACCAGTCATCTTCTTCTTC AAAGAGAGTGAATGATAGCACAGATAGCAACAATTATATTCCTGTGAAAA GCAAGAGGAAAAGGGTTTCATCGATTCTGCTCCCAAAGAAACCACATTTG CAAGAAGATATGCCAGTATCAATTTCTATTGGAGGCATTTTACAAGCAGG AAAATTAGTTACTCCAACATTGGATAATGAGGTAACTTTGACACTAGAGT CATTCAACATCAAACATAAAATTTGGCTAAAAGGTGAAACTAGCAAATTT CACATGCAAACAGAAAAATTTGCAGAGGGAGGTTTTAGAAATGCCTTCAA AGCATACACAACTGAAAATGGAACCACAAAAATTTGGGTCATAAAAAAGT TCAAAGAGTCAGCTTGGAACGTATGCGGCCCACGGTATAATATGACCCTT GAAGAACACACAAGAAAGCAGGTACAAATGCACACTGCAGCAAAAGCAAT AACAGCAAAGTGTATGAAAAAGCCAGGCTTTAGGGAAAATTGGTTTCAGT ATCAAACTATCCAATTTGCTCTTCTTAATGGTGAGCCAATCACTGTTGAG CCCTATGTTGAAGGAGACTTTATCAAATATATTAACAATAATAGAGTTCC ATGCAAGCGCAAAAGTGGTCAAGAGACATTTTATGATAAAGCTGAAGCCC TTGTGCATTTTTCTTATCAAGAAAGTGATGAAAAGCTTTTGTTGGTAGAT TTACAAGGAAGTGGTTATAATCTATACGATCCGGAGATCGCCACATCAGC CGACCTTGATAAAGATGTACAAGATGAGAGATTTTTCTGTGCTGGTAATT TAAACGAGGTTGCTTTCACCTCTTTTTTCGAGTCACACAAATGTAACTTA TTCTGTAGGCTTCTTGGATTGAAGGAAGTGGAGATTGTGGACGGGTCAAC GCTGTAGATTATTGAAAGACTGTCATTTGTTGAAATTTCTTTTGTTTTAT TTGTTCAAAGTTGTAAGAAAACATGCTCGCCTTTGACGAGTACTGGATCG TCAGATAAAAACCTAACGTGTATTCAAGTTTATTTTTGTTACTTTTTTAT TTTCTTTTAAAAAAGAAATTTTTAGTTGTTACACGCTTTTTTTATAAGAA TTGGCTGAGGGTCAAGTATTCTTAAAAAAAATGGCCGAAATTGAGGGTGA AATAATATATAAATATAAGAAATGACCTATTTGATTTGAGAGTATCTTGT TCTTCTTTCTTGTTTCTTTCTATTTAGCCAGATTTAGCGCACATTTGAAG CTAAAATTGTATTCTACCTTAAATAAAGTTTCAATTTAAGTCGAACAAAA AACCCATTCATTTTTGTCAACAAATAGAAAATGACTATATTATTATCAAA ATCTGTGAAACTCACCCTGGAGGTATTCTTAGGGTATTCTTAAGAATTGG CCAATTTTCACCCTGATATTCTTATAGAAGGTATTCTTATAAAAAATTAA GCGTGTGTGTTTTTAGCTTGTATATAGATGTACCTTTCTGTGTGATAAAA GAGAAATTTTTTATTATTATTATTATTATTATTATCATAAGTGACACAAT TTGGCATAAATGACACTTTTCTCAGAAACCATTTGAATTCTCACTAGGAT ACAATATCTTTACTGTTTGATCTTTTACCATGATTAAATTCATATAAGCA TTCATAGCTTGTTTTCAAATTCAGCTTATGGCTGTATGTGCATTTTTCAA TGCAAAATTAAAATTTGATAATGTTTGTTATGTAAGTGTTTATTACATAT TAGACCCCATTATCTAAAGAATGAGTCGTTTATGATTTTGGTCTTCAGTT TTTGTAGTAATTTTAGTATTTTTCGGATACTCTTCTGTGCTTAATTGTAG GGGGCGTGGAATAAGCAGGGGGTGGGTACCCCGGAAGAAAAATCATAAAA TGGGGGTGGGTTCATTATTAAGTGATTTTGGAGTGATTTTCCCAAAAAAA ACCCTAGGGAAATGAAGGTTTTGGCACTTTTTTCAGGAAAACTTCATACA ATGGGGGACATTATAAAATGCTATGGGGTGATTTTCCAAAAATTGCAAAG TGANTCAGGAAAATTTCATAAAATGGGGGACATTATAAAATGCTATGGGG GTGATTTTCCAAAAATTGCAAAGTGACCCCCCCTACGATTAAGCACATAT GAGTACGATTTTTTGTTTTTATTGGTTTGAACCTGCTTGCATTTGAATAT TTTTGATTCAACAGAATATATATATCATATTTGCAGAGAAAGTTTTGTCT TTTTTATTAATATACCTAATGAGTAAATGAACTGAGTCGTCGTAATAAAT TACCGAGATTGTCCTAATTAACAAGTGCACGAAGTACAGTCGAGGCTCTC TAATTAGACGTTCCATTATTCGAAAAGTTACCGTATTCGATGAAAATCTC ACTCCCTGGGAATCGAATTATAAAAACTAAATTGAAAACAAAAATACTGT GATCAGTTGTCATAAATTGTTCCCGACATGCGAAAGCCGATATCACTCTC AGGACTCCCGGACTCTTTAGTCGAAGACCGATTCTCATTCCAATCCTGGG TGTAAACCCTACAAGTGCCTATAAAATGAGAATTCTCCATCTATAGGACA CTCCAATCTCCTTTAAAGTCTCAAGAGAGGGGAATCTTGTTCTTGCAGTT GACACAGCGTACACGCACGAGTCCGACTACTGTAATTTTCCTATATTTTA AACACACGTCCGGATGAGTTTCCTAGTTTTGTTGGCACATTAAAGTCCAC TGCTACTACCTCATTTGAGCCGTCAGTCGATTCCGACTACTGCGTAATCT TCCTATTTTTAAACACCTTTGATGGGATGCTGGCCCCCATTATTGCTTTA ACGTGGGTGGCCTCCGCCAAATACGCCACGGATTAAGGTTGCAGCGCAGT GCCCGTAAGTTAAGCGGAATAAGTAAATGATGATCTGTGACTCTAGAATA CACTCGTTCTTCATTCTCCACTTTGTAATTTTTCTTGAACGTATTCCCAA ACTCCAAATACTAGGGAGATAAAAATGACAATGACAACGCTGGGCTACGT GATTTTTTTACGTTTTTTAAATTTTTTAAATTTTAAATTTTTTCTTTTTT AATTAAATTTTTTTTATTGTCTCTTTTTTTAACTATTTTTTATTTTTTTA TTATTTTTTTTATTTTTAAAATGATTTTTAAAATTTTTATTCAGAAATAA AAAAATGTTTTTCTTTTTTTAATTACTTTTCGTACTACTTTCTATTTGAA GAAAAAAACACGTTGACAACGATGGGCCACCATAGTCATGTACCCTCCCC TCACGTCAATCTTTAGAGTATTGCTTAAAAACCTAAACTTTGTTTTTGTA ATGAGTACAGTACTGCTTTTTAAAAGGACCCCATTCTTTGATTCAATAAT TTATAAATTTTGGGAATGTTTCATCTTATAGATATCATCATTCATCTTAA GTCCCATCCACATGCCTCAAAATCGGAATCAAAATAGTGACCGATTGGGA AAGACTAGAGTTCTGAAATTTTCACTGGATATTTGTTTAAATGTTCTCCG TTCTCCATCAGAAAAAAAAAATTCCTGTCTTTAAACATCATCAATTTTTC TTTGCAACTTAATAAGATAAGCATTTTTAATCCGATAAATCCGATAAATC CGATAAAAGATCACCGCCCTTTGCCCCTCCCCGCACGGGGTTCATTGTAT GGTAGTATTATTTGCCGTTGTCGAGTATGTCAGACGTCAGACAATGCGTA CAAGTTTTTAAACTCCTGAAAACGTTCATGTTTGTAAAGTAATTTAAAAC GTTTGACCATTTTGGATTTATCCCATCTTAATGAAGCGTAGTAAAAAGCA ATTTTTGAAATCCTAGAGTGGAAGTA

Coding sequence (CDS) from alignment at sc0000087:156558..169733-

>TCONS_00008764 ID=TCONS_00008764|Name=TCONS_00008764|organism=Clytia hemisphaerica|type=CDS|length=1149bp|location=Sequence derived from alignment at sc0000087:156558..169733- (Clytia hemisphaerica)
ATGGTTGGAAGCATGAAGTGTTTATTTCTTATCATTTGCTGCTTGGTGTT
GTTAGAAGCCTGCGTCGATTCACCGGGTAAAGATTGTTGGGAAGGTATGC
GAAAGCGTAGCCCGCCACGTCACTCAAGATGTTGCCGTCTTTCAAGACGA
TATAAGACATTATTCAAGCGACGTGATCGACAGAAACGACAATGTCAACG
TGTCGTTGTCGCTCTTAATAGCAAAGTTGACGGGCTGAAAGAAGCCTTAA
ATGACCAACAGATTGTCGTTCGTGTTATTCCTGCAGACACTCAGCAACCG
ACTGTCGGACAGCTTGTAGAAATTCGAGATCGCACGGTCGCTCTTCTAAA
CAATGCTCAGTTTAGAAATAGAACTACTTCGATACCACCTTTAACGACAA
CAACAACGACTTCACAAACGACACGACGGACTAAATATCCGACAACAACG
ACAACGACTTTAAAAACGACAAGACCAACCAAATATCCAACAACAACAAC
TACGACGCAGAAGAATACACGATATCCAACGACAACAACTCGAACGACGC
CGACTCTACCGTCACCTTCGGATCTTTGGTATTCAGTACCCAAGTATAAA
CTAATGGACGATACTGATTCATATATAGACAGTAGTGACGAGTTTATTAA
AGAACTTTTTGAGGGTGAAGAACAAACTTCTGATGAAGAAGAAAATGAAG
AGGAAGATTTCAATGAAGATGATGAACGAAAAAGAAGACGAAGAATGACT
CAGACATCAAGACGAACTTGTCCGACACCTCGACAATCTTTATACACCAT
ACCCAACCTACCTCCTGGCACAACATCCACTTTCTTGAGCACTAGAGAAT
CTCTTGATGCCATTGGTAGCATATTGGTCAGATCGTGTGCTGAATGTCAT
TATCAAATCAATTTACCTGATGGTTATTACCCACGTGAGCACCGTCACGT
GATTTGTCCGCCAGCTAAAGTCAATTGTTTTGCCGGTATCGGAAAGTGCG
CTAAGAATGAAGTACTGATGACAATTTTCAAAGATACGGATAACGATTCA
ACAAGATTCGATTGGGACAGTAAAGTGAATATCATTTTCAACAAAGGATG
TGGATGTCAAATGCTGGCTGATTACTCATTTATTGGAGATGGGAATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004912XLOC_004912Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008764-exon-sc0000087-1575043694:169522..169733TCONS_00008764-exon-sc0000087-1575043694:169522..169733Clytia hemisphaericaexon
TCONS_00008764-exon-sc0000087-1575043694:168558..169296TCONS_00008764-exon-sc0000087-1575043694:168558..169296Clytia hemisphaericaexon
TCONS_00008764-exon-sc0000087-1575043694:165077..165245TCONS_00008764-exon-sc0000087-1575043694:165077..165245Clytia hemisphaericaexon
TCONS_00008764-exon-sc0000087-1575043694:163274..164422TCONS_00008764-exon-sc0000087-1575043694:163274..164422Clytia hemisphaericaexon
TCONS_00008764-exon-sc0000087-1575043694:156558..157148TCONS_00008764-exon-sc0000087-1575043694:156558..157148Clytia hemisphaericaexon
TCONS_00008764-exon-sc0000087-1510915933:169522..169733TCONS_00008764-exon-sc0000087-1510915933:169522..169733Clytia hemisphaericaexon
TCONS_00008764-exon-sc0000087-1510915933:168558..169296TCONS_00008764-exon-sc0000087-1510915933:168558..169296Clytia hemisphaericaexon
TCONS_00008764-exon-sc0000087-1510915933:165077..165245TCONS_00008764-exon-sc0000087-1510915933:165077..165245Clytia hemisphaericaexon
TCONS_00008764-exon-sc0000087-1510915933:163274..164422TCONS_00008764-exon-sc0000087-1510915933:163274..164422Clytia hemisphaericaexon
TCONS_00008764-exon-sc0000087-1510915933:156558..157148TCONS_00008764-exon-sc0000087-1510915933:156558..157148Clytia hemisphaericaexon
TCONS_00008764-exon-sc0000087-1491911889:169522..169733TCONS_00008764-exon-sc0000087-1491911889:169522..169733Clytia hemisphaericaexon
TCONS_00008764-exon-sc0000087-1491911889:168558..169296TCONS_00008764-exon-sc0000087-1491911889:168558..169296Clytia hemisphaericaexon
TCONS_00008764-exon-sc0000087-1491911889:165077..165245TCONS_00008764-exon-sc0000087-1491911889:165077..165245Clytia hemisphaericaexon
TCONS_00008764-exon-sc0000087-1491911889:163274..164422TCONS_00008764-exon-sc0000087-1491911889:163274..164422Clytia hemisphaericaexon
TCONS_00008764-exon-sc0000087-1491911889:156558..157148TCONS_00008764-exon-sc0000087-1491911889:156558..157148Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008764-proteinTCONS_00008764-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000087supercontigsc0000087:156558..169733 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.7251 12.941 10.2029 8.40728 0.204676 0.0910889 0.390181 0.166674 1.31426 1.52546 0.280999 1.7595 7.8596 6.8739 14.4106 8.62857 5.61952 11.4947 0.0211281 0.332563 0.245552 0.43045 7.442 7.50657 2.28505 1.53134 1.22368 1.00992 1.59574 2.28107
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029034Cystine-knot_cytokine
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008764 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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