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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008765 ID=TCONS_00008765|Name=TCONS_00008765|organism=Clytia hemisphaerica|type=transcript|length=2653bp
CCCTTGTTTGCACGGAACGTATTTTGATTGAGTAAGAATTCTCGTGATGT
CATGAAGTTTAATTAGAAACCATTGATGCTCTTTCACGTCTGTTTGTTTT
CTTCGAAAATCAAATCCTTTTGAAAGCATTTCTCGGTTTTGAAATCTTCA
TTCATCGGAAGTTAAGGAACAGTAAAAGAAGCTATCACGCCGCATTCCAA
CAAGAACAAAAAGTCTACAGCAAAAATATGAACACCTTACTTATCATCAC
AGAAATCCTAACCCTCATTTGTCTATCTAAAACTTACCAAAGCAAACACG
ACTATGAAGATAACCAGCAGAAACAAGACAGATGTTGCTGCAAAGTCGAA
GTATATCGTGAACTGTTATGGTTTGAACAGAAGAAAAGTCAACAATGTGC
AgccgaaaaagaaaaagaaaacacaaagaTTAATAACCTGAAAACTTCGT
TAGGTGGGAAACGCACTGGCGTCAAAATCCGCCCTCCTAAAAGAAACGCC
CGTTCTAAAGATCAACTTAGGGCAATTCGTGATCGCCTTGTGGGAATGCT
TCAGAAATTAACTTTTAATGGAAACTCAACTATTTCGAACTCTACAATTA
GACCTGCGTTGACAACTTTAATCACAAAGTTGAGATCTCTCTTCACAGAA
GCGAGCAAAACACGTACTCCCCCACCAGTTACGATTCAAACAAGTACTAC
TGCGAAATTAACGAGCACCGTTGTACCTGTAACAACAAAATCACAATCTC
GGGAAGAAACAACTGCCTCTGTTCAAGAAACTACATACCCTATCAAAGAA
ACTACAagttttacctcccaaacaacgACAGGCACTTCAAACACTGGAAC
ACTTGCAAAGATCACTTCAAACACAAAATCACAACCAAATCAGGAAGAGA
CAACCTCTCCAACTTTTAAAACAACTGATACAAAATTCTCAAATCTGAAA
GAAACAAAATATATTCCAACCACTTCACAACCTTCTGCATCAACAGAATC
ACCAAGTTTACCAATCACAGAGGTGACTAATGGCTCCAAAACCACTCCAG
ATATAACAGATGAAACTACAGAAGATTCTGGAAAGACAACCAGCAGTAAA
TCCAGTTCGACCAGCTCTCATGTCACTTCAAATTCATTTAAAAGTACACA
AAACCAACCCTCACCATCAGTGACTAAATTTCAAAGCTCTTCACGTCCAA
CAATAACTACCTCAGTAACAAAAACTAAGCGATTCAAGCGACAAGGACCG
TCAAAACCAAAGAATATTGATAAAGTATCACTTCTGAACTCAAGATCCAA
TGACCCACCAATGGCAAGCCGTCTGATAAAAAGAGAACCTGGAAATACTG
GGGTTGCATTGAAAGACGAGCAAAAAGATTCATCAACTTTGTGCTCAACT
TCAGAACAAGAAGTCTTGTCAACTATTGACAATTTACCAACGGGCACCAC
AATGGAAGTACTATCGACTGTTGAGTCAATGAGCGAAATTGATGACAGTA
CAGTTCAAGCATGTGCTGAATGTCATTATCAAATCAATTTGCCGGATGGC
TACTACCCAAAGGAGAATCGTCATGTGATTTGTCCATCCACCAAAACCAA
TTGTTTCGGAGGAATGGGTGTTTGTTGCAGCAATCAAGTTGTGACCACCA
TTTACAAAGACAGCGACGATAGTACCACACAattctccagtgaaaatgaa
ctGTTCCTAAAGTTTAATAGTGGGTGTAGTTGCCAGATGGAAAAAGATTG
GGCTTCTTCGATAGGAGATGGCAACTAAGACAAGCCTAAAAACTCTTTTC
ATTCTTGAGTTTATTCGCTTTAAGTGAGCTATTTATCTTACTGTCATGTG
TGGAAACCAGTCTGATTACGCTGATATGGTTTCTACATGGTAGAGAAAAA
GAGTGCAGACTTAATTAAAATGAATGGACTAGCAATattgatgtttttga
tttttctaaaacagcgatgcattgtgggattgtttcgggggtattacaaa
agaattccctcgaggaattcctaagagatttttaTTGTGATACcgccgaa
acaatcccacaatgcatcgctttttcagaaaaataaaaaactattatAAG
GCCTATCGAGTAGCAATATTGGACTATGTATTTTGACATCGAGTTGGATC
AAAAAATGCCAAATAGTTGTGTAAATATGATTTCTTCTCATACTTTGCGC
TGCATTGACGGGTTCGAAATCACTTCCGAAACAGAGTGTTAGTTAGAGGA
GTGGGTGCATGAACATAGTGGGTATAAATCCGAGATCTAGATATTCCTAT
CATGTATCATACTTAGCGAGTTGTTATTCCATTAAACCGGACAATTTGAT
GAAATATAATAAGCAGCAAACTCCGAATATAAgcatctttctgatttttt
gtaaaaattcacgaaagaaaacaaaatgttGTGGTAAACAGAATATTTCG
ATGTTTCACTCAAATAAATGCTGTATTATTCTATTGATTCTTCTTTGTCA
TGGTCACACATTGACATTGctgctttttatattttattccaTTGTTGGCT
GACTATAAGGGGTTAAGGGGTCTTATTGATGTCAAAGTTACTCTTAAGAT
AGATCTTTATTGGGTTACGGTTGCATCAATGTGGTATATTGTGTTTAATG
GAC Run BLAST on NCBI protein sequence of TCONS_00008765-protein >TCONS_00008765-protein ID=TCONS_00008765-protein|Name=TCONS_00008765-protein|organism=Clytia hemisphaerica|type=polypeptide|length=516bp
MNTLLIITEILTLICLSKTYQSKHDYEDNQQKQDRCCCKVEVYRELLWFE
QKKSQQCAAEKEKENTKINNLKTSLGGKRTGVKIRPPKRNARSKDQLRAI
RDRLVGMLQKLTFNGNSTISNSTIRPALTTLITKLRSLFTEASKTRTPPP
VTIQTSTTAKLTSTVVPVTTKSQSREETTASVQETTYPIKETTSFTSQTT
TGTSNTGTLAKITSNTKSQPNQEETTSPTFKTTDTKFSNLKETKYIPTTS
QPSASTESPSLPITEVTNGSKTTPDITDETTEDSGKTTSSKSSSTSSHVT
SNSFKSTQNQPSPSVTKFQSSSRPTITTSVTKTKRFKRQGPSKPKNIDKV
SLLNSRSNDPPMASRLIKREPGNTGVALKDEQKDSSTLCSTSEQEVLSTI
DNLPTGTTMEVLSTVESMSEIDDSTVQACAECHYQINLPDGYYPKENRHV
ICPSTKTNCFGGMGVCCSNQVVTTIYKDSDDSTTQFSSENELFLKFNSGC
SCQMEKDWASSIGDGN Run BLAST on NCBI transcript from alignment at sc0000087:172237..176339- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008765 ID=TCONS_00008765|Name=TCONS_00008765|organism=Clytia hemisphaerica|type=transcript|length=4103bp|location=Sequence derived from alignment at sc0000087:172237..176339- (Clytia hemisphaerica)
CCCTTGTTTGCACGGAACGTATTTTGATTGAGTAAGAATTCTCGTGATGT
CATGAAGTTTAATTAGAAACCATTGATGCTCTTTCACGTCTGTTTGTTTT
CTTCGAAAATCAAATCCTTTTGAAAGCATTTCTCGGTTTTGAAATCTTCA
TTCATCGGAAGTTAAGGAACAGTAAAAGAAGCTATCACGCCGCATTCCAA
CAAGAACAAAAAGTCTACAGCAAAAATATGGTAGGGATTTGAGTTTTGTG
TAGTTCTCATATTAGAGCGCATCAACAGACAGATTGATACCTAGTTTCCC
TAGAAAAGAATGTTATATACTTACATCCCTGTCTCATAGTGGGAATTCTC
AAATTTTTATTGTCCTTCCCGTTGGGGTGTGAGTTTTGTGTGGTTTGTTA
AATTTCACGGTATTTCTCACAGAGACGATTTTTGTCAGAGTTGCTGGAGT
GTACACAAGTATACAGTCTATAATTTAGGAAATATTTCAATTTATTTCAA
ATAGGAACTCTGCTCTATAACCAGTAAATATTATTTTCCCTTTAGAACAC
CTTACTTATCATCACAGAAATCCTAACCCTCATTTGTCTATCTAAAACTT
ACCAAAGCAAACACGACTATGAAGATAACCAGCAGAAACAAGACAGATGT
TGCTGCAAAGTCGAAGTATATCGTGAACTGTTATGGTTTGAACAGAAGAA
AAGTCAACAATGTGCAGCCGAAAAAGAAAAAGAAAACACAAAGATTAATA
ACCTGAAAACTTCGTTAGGTGGGAAACGCACTGGCGTCAAAATCCGCCCT
CCTAAAAGAAACGCCCGTTCTAAAGATCAACTTAGGGCAATTCGTGATCG
CCTTGTGGGAATGCTTCAGAAATTAACTTTTAATGGAAACTCAACTATTT
CGAACTCTACAATTAGACCTGCGTTGACAACTTTAATCACAAAGTTGAGA
TCTCTCTTCACAGAAGCGAGCAAAACACGTACTCCCCCACCAGTTACGAT
TCAAACAAGTACTACTGCGAAATTAACGAGCACCGTTGTACCTGTAACAA
CAAAATCACAATCTCGGGAAGAAACAACTGCCTCTGTTCAAGAAACTACA
TACCCTATCAAAGAAACTACAAGTTTTACCTCCCAAACAACGACAGGCAC
TTCAAACACTGGAACACTTGCAAAGATCACTTCAAACACAAAATCACAAC
CAAATCAGGAAGAGACAACCTCTCCAACTTTTAAAACAACTGATACAAAA
TTCTCAAATCTGAAAGAAACAAAATATATTCCAACCACTTCACAACCTTC
TGCATCAACAGAATCACCAAGTTTACCAATCACAGAGGTGACTAATGGCT
CCAAAACCACTCCAGATATAACAGATGAAACTACAGAAGATTCTGGAAAG
ACAACCAGCAGTAAATCCAGTTCGACCAGCTCTCATGTCACTTCAAATTC
ATTTAAAAGTACACAAAACCAACCCTCACCATCAGTGACTAAATTTCAAA
GCTCTTCACGTCCAACAATAACTACCTCAGTAACAAAAACTAAGCGATTC
AAGCGACAAGGACCGTCAAAACCAAAGAATATTGATAAAGTATCACTTCT
GAACTCAAGATCCAATGACCCACCAATGGCAAGCCGTCTGATAAAAAGAG
AACCTGGAAATACTGGGGTTGCATTGAAAGACGAGCAAAAAGGTAAGCTG
AATTTTATAAGATGAGATAATTCGGCACTGTTCTAAATGAGAGAAGTATC
TCCTTATTTCAGCCATAACTGATTTCAAATCAGGATACTGAAATCTTTCA
ATAACATCAGAAGGTTGCACTTTATGTAATTACTCTTTCAAAAAGTTTAA
AGGACCCTCTTAGTGAACTATGATGCAGCCGAGTGTTCATTACTTGGAAA
TGTAACCTCAAATTCTCTTAAATAACAAAAACTAAGTTGTCAGAATTGTG
GAAGCGTTCGAGTTTAGGAGAGTAATCAGTAATCACAACCACCAAATTAA
TGAAATTTCTTTTCTTTATTTTACAGATTCATCAACTTTGTGCTCAACTT
CAGAACAAGAAGTCTTGTCAACTATTGACAATTTACCAACGGGCACCACA
ATGGAAGTACTATCGACTGTTGAGTCAATGAGCGAAATTGATGACAGTAC
AGTTCAAGCATGTGCTGAATGTCATTATCAAATCAATTTGCCGGATGGGT
AAGTCAAGTTCCTTCTGGAAAGATTCGGATGTCCATTTAGGCAATAGCTC
ATAAATTCAAAAATAATTTGGGGTTGCATTTGAAAATTCTGGTAATGATT
TTTTTTAAGTAAAGATTGTAAAAATGTTAAAAATTCATTTTCGCTGAGGG
CCAACTTTACCTACTTTAGGATACCTGTTTAAAGTTATCGAAGTGTGAAA
AGGTGTCAGCCGCAGTTTCAGTAGCTACAATCATGGTCGAAGTATATTGA
CATTTTAGTGTATTTTAACGTTTTTCAGAATTTAAAGTTCGGGTGAGAAT
TGCTATTTTAGCACTACCACTTTCTTTCATTGAATATTTCGATTTTAGAG
GGGTTCGGTGGCTTCTAGGCTGTATTCCAAGCCTTATTTACCTTATCATA
AGGTCCTAAGTCTTAAGGCGCATGTTAAAACTCAGAGCTAAAACTCTACT
TTCCAACTGTAGTTTAAGGCGCTTAAAAACCATTTAAAATGTGGTGTTTA
AAATTTCGCCGGGAAATCCCCTTTGTCTCAAATATTTTGTCCATGATTGT
AGTAGTATCTAGTAGATTTTGGCCAAATCCGACAAATCTTCTATCGCCAA
AATTTCTTTCCATAAGATATCACTAGCGAGACGGTTAGGTTTTAATTCAG
TTAGATCTGACTGACTTAGGACGACAGTACACAAGACGATGGTAAATCAG
CCCTTTTACAGTCCTCCATTTCGTGGTTCACAACTACGGGTTGTTCAAAA
AAGCTTCAGTAATTCCGCCGTCCTCAAAATGTTCATCTACTATTTTCAGC
TACTACCCAAAGGAGAATCGTCATGTGATTTGTCCATCCACCAAAACCAA
TTGTTTCGGAGGAATGGGTGTTTGTTGCAGCAATCAAGTTGTGACCACCA
TTTACAAAGACAGCGACGATAGTACCACACAATTCTCCAGTGAAAATGAA
CTGTTCCTAAAGTTTAATAGTGGGTGTAGTTGCCAGATGGAAAAAGATTG
GGCTTCTTCGATAGGAGATGGCAACTAAGACAAGCCTAAAAACTCTTTTC
ATTCTTGAGTTTATTCGCTTTAAGTGAGCTATTTATCTTACTGTCATGTG
TGGAAACCAGTCTGATTACGCTGATATGGTTTCTACATGGTAGAGAAAAA
GAGTGCAGACTTAATTAAAATGAATGGACTAGCAATATTGATGTTTTTGA
TTTTTCTAAAACAGCGATGCATTGTGGGATTGTTTCGGGGGTATTACAAA
AGAATTCCCTCGAGGAATTCCTAAGAGATTTTTATTGTGATACCGCCGAA
ACAATCCCACAATGCATCGCTTTTTCAGAAAAATAAAAAACTATTATAAG
GCCTATCGAGTAGCAATATTGGACTATGTATTTTGACATCGAGTTGGATC
AAAAAATGCCAAATAGTTGTGTAAATATGATTTCTTCTCATACTTTGCGC
TGCATTGACGGGTTCGAAATCACTTCCGAAACAGAGTGTTAGTTAGAGGA
GTGGGTGCATGAACATAGTGGGTATAAATCCGAGATCTAGATATTCCTAT
CATGTATCATACTTAGCGAGTTGTTATTCCATTAAACCGGACAATTTGAT
GAAATATAATAAGCAGCAAACTCCGAATATAAGCATCTTTCTGATTTTTT
GTAAAAATTCACGAAAGAAAACAAAATGTTGTGGTAAACAGAATATTTCG
ATGTTTCACTCAAATAAATGCTGTATTATTCTATTGATTCTTCTTTGTCA
TGGTCACACATTGACATTGCTGCTTTTTATATTTTATTCCATTGTTGGCT
GACTATAAGGGGTTAAGGGGTCTTATTGATGTCAAAGTTACTCTTAAGAT
AGATCTTTATTGGGTTACGGTTGCATCAATGTGGTATATTGTGTTTAATG
GAC Coding sequence (CDS) from alignment at sc0000087:172237..176339- >TCONS_00008765 ID=TCONS_00008765|Name=TCONS_00008765|organism=Clytia hemisphaerica|type=CDS|length=1551bp|location=Sequence derived from alignment at sc0000087:172237..176339- (Clytia hemisphaerica)
ATGAACACCTTACTTATCATCACAGAAATCCTAACCCTCATTTGTCTATC
TAAAACTTACCAAAGCAAACACGACTATGAAGATAACCAGCAGAAACAAG
ACAGATGTTGCTGCAAAGTCGAAGTATATCGTGAACTGTTATGGTTTGAA
CAGAAGAAAAGTCAACAATGTGCAGCCGAAAAAGAAAAAGAAAACACAAA
GATTAATAACCTGAAAACTTCGTTAGGTGGGAAACGCACTGGCGTCAAAA
TCCGCCCTCCTAAAAGAAACGCCCGTTCTAAAGATCAACTTAGGGCAATT
CGTGATCGCCTTGTGGGAATGCTTCAGAAATTAACTTTTAATGGAAACTC
AACTATTTCGAACTCTACAATTAGACCTGCGTTGACAACTTTAATCACAA
AGTTGAGATCTCTCTTCACAGAAGCGAGCAAAACACGTACTCCCCCACCA
GTTACGATTCAAACAAGTACTACTGCGAAATTAACGAGCACCGTTGTACC
TGTAACAACAAAATCACAATCTCGGGAAGAAACAACTGCCTCTGTTCAAG
AAACTACATACCCTATCAAAGAAACTACAAGTTTTACCTCCCAAACAACG
ACAGGCACTTCAAACACTGGAACACTTGCAAAGATCACTTCAAACACAAA
ATCACAACCAAATCAGGAAGAGACAACCTCTCCAACTTTTAAAACAACTG
ATACAAAATTCTCAAATCTGAAAGAAACAAAATATATTCCAACCACTTCA
CAACCTTCTGCATCAACAGAATCACCAAGTTTACCAATCACAGAGGTGAC
TAATGGCTCCAAAACCACTCCAGATATAACAGATGAAACTACAGAAGATT
CTGGAAAGACAACCAGCAGTAAATCCAGTTCGACCAGCTCTCATGTCACT
TCAAATTCATTTAAAAGTACACAAAACCAACCCTCACCATCAGTGACTAA
ATTTCAAAGCTCTTCACGTCCAACAATAACTACCTCAGTAACAAAAACTA
AGCGATTCAAGCGACAAGGACCGTCAAAACCAAAGAATATTGATAAAGTA
TCACTTCTGAACTCAAGATCCAATGACCCACCAATGGCAAGCCGTCTGAT
AAAAAGAGAACCTGGAAATACTGGGGTTGCATTGAAAGACGAGCAAAAAG
ATTCATCAACTTTGTGCTCAACTTCAGAACAAGAAGTCTTGTCAACTATT
GACAATTTACCAACGGGCACCACAATGGAAGTACTATCGACTGTTGAGTC
AATGAGCGAAATTGATGACAGTACAGTTCAAGCATGTGCTGAATGTCATT
ATCAAATCAATTTGCCGGATGGCTACTACCCAAAGGAGAATCGTCATGTG
ATTTGTCCATCCACCAAAACCAATTGTTTCGGAGGAATGGGTGTTTGTTG
CAGCAATCAAGTTGTGACCACCATTTACAAAGACAGCGACGATAGTACCA
CACAATTCTCCAGTGAAAATGAACTGTTCCTAAAGTTTAATAGTGGGTGT
AGTTGCCAGATGGAAAAAGATTGGGCTTCTTCGATAGGAGATGGCAACTA
A
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008765-exon-sc0000087-1575043694:176110..176339 | TCONS_00008765-exon-sc0000087-1575043694:176110..176339 | Clytia hemisphaerica | exon |
| TCONS_00008765-exon-sc0000087-1575043694:174648..175794 | TCONS_00008765-exon-sc0000087-1575043694:174648..175794 | Clytia hemisphaerica | exon |
| TCONS_00008765-exon-sc0000087-1575043694:174142..174313 | TCONS_00008765-exon-sc0000087-1575043694:174142..174313 | Clytia hemisphaerica | exon |
| TCONS_00008765-exon-sc0000087-1575043694:172237..173340 | TCONS_00008765-exon-sc0000087-1575043694:172237..173340 | Clytia hemisphaerica | exon |
| TCONS_00008765-exon-sc0000087-1510915933:176110..176339 | TCONS_00008765-exon-sc0000087-1510915933:176110..176339 | Clytia hemisphaerica | exon |
| TCONS_00008765-exon-sc0000087-1510915933:174648..175794 | TCONS_00008765-exon-sc0000087-1510915933:174648..175794 | Clytia hemisphaerica | exon |
| TCONS_00008765-exon-sc0000087-1510915933:174142..174313 | TCONS_00008765-exon-sc0000087-1510915933:174142..174313 | Clytia hemisphaerica | exon |
| TCONS_00008765-exon-sc0000087-1510915933:172237..173340 | TCONS_00008765-exon-sc0000087-1510915933:172237..173340 | Clytia hemisphaerica | exon |
| TCONS_00008765-exon-sc0000087-1491911889:176110..176339 | TCONS_00008765-exon-sc0000087-1491911889:176110..176339 | Clytia hemisphaerica | exon |
| TCONS_00008765-exon-sc0000087-1491911889:174648..175794 | TCONS_00008765-exon-sc0000087-1491911889:174648..175794 | Clytia hemisphaerica | exon |
| TCONS_00008765-exon-sc0000087-1491911889:174142..174313 | TCONS_00008765-exon-sc0000087-1491911889:174142..174313 | Clytia hemisphaerica | exon |
| TCONS_00008765-exon-sc0000087-1491911889:172237..173340 | TCONS_00008765-exon-sc0000087-1491911889:172237..173340 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000087 | supercontig | sc0000087:172237..176339 - |
Blast
The following BLAST results are available for this feature:
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