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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008783 ID=TCONS_00008783|Name=TCONS_00008783|organism=Clytia hemisphaerica|type=transcript|length=1575bp
ACAAAATAACAGTATATTATTTTGAttaattcttcatttttccCGATTCT
CACAGAGCCTTATTCTTTCATTTCGTAATAATTTCTCCATTTTCCCCCAA
CCTCAAAgcaaaaaatagagaaaataatAGAGACAAGGATctcaataaaa
tataataatttgaTTGTATCTTCTAGAAAAAATACTTTGTATTATTTTTG
CGCACTTTGTATTTAATATGCAAGTTGTATTAAGTTTATTGTGGTTTGGA
AATGACGAAAATTATGTCTCTCGATAGATATTCATAGATATTCAAGTTTC
GTTCATTACTTGATCCACCATTTTGTCCACCATATGGTAACatagatatt
tttttctcaagatgGAAAGAAAATGTTCACCACACATCCAGGTCacgcaa
aatattgaaaatccaTACATCCCGAAAAAGAGGGCTGGAGCGGACTTAAA
CTTTGGGATTATACCCTTTTATTCACGGTATTCATTACCTAATTTTTTTC
TACGGAAACACcccggttttttttttctttaccttAAGTGACCCCTACTA
CCaaaaaaccggggtatttccgtagaaaacagcATTACGCCATGAATCAT
TTATCGAAATTACAAAAGAACCCAAAACAATACCGGGCGTTTGCCAAAAG
GTGTAACGTTGAAATTTGCCACAAATTGTAAAATGCTGACTGTGTGCATA
TGAAAGACCACTGAAGGTGGTCGCTATATAAGTtgataaaatctattttt
gtaTCATGTACTAATATGGTGAATTATACTTCAATATTCTAATAGCAATA
TTGAAATCTCCATATGTCGACTTGAAGATTCAAAGAAGTTTCCCCATGGC
CATGTGATGCAATGAAAATATATAGATATTGTTTATCACTCTTTTGAAAT
GACTTCCCGTTTCTTTGAGTTAAATCCATAAGCACCCAATTGATACAGAT
AGGATATCAACTCGCATTTTCATTTACTTCTAAATTTTTATGATAATACA
GATATCAAAGTAAAAGTGGATCTCTCTTTCAAACCATCGTTCTCCTCTCA
AGGAGCCTTATGGTCAAAACTCGTCAGCCGTAAGCTTTGGGCGTTCTCAT
ATCTAAGCTCCCTATGGTCAAAACTCATCAGCTGTTGGCTATGGGCGTTC
TCCTCTCTAAGCGCCCTATGGTAAAAACACATCAGCCGTCAACAATGGGA
AAACATAGTTATTACTCTTCCCCAGGACCCTCATCACCAACACCAACAGC
CTCCTCGTCTAAAGTCTGTGCACCATGCGTTGTATCATCTTGCGCATGCG
TTGTATCATCAAAAGTGTCATCTTCAGTTTTTGTCTCAtctcttttaatt
tcttgttGACCTCCTTCTTTTGGAGAAATCTCTGCTTTTTGTTTCTTGGC
TTTTCGTCGTTGATGTTTCCAAATATCCTTCATCATGGCTTTCAGATCGG
ATAATTTCCCGTTCAGTAGCTCAATGTCGGTCAGTTCGTCGTTAATCTTA
CTGACGCGATCTGTGAGTTGTGTCATGTCGTGTTGTAAGGCCTTCAAACT
GTCTTGTACACTATTTTCTGCTTCC Run BLAST on NCBI transcript from alignment at sc0000087:393030..395625- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008783 ID=TCONS_00008783|Name=TCONS_00008783|organism=Clytia hemisphaerica|type=transcript|length=2596bp|location=Sequence derived from alignment at sc0000087:393030..395625- (Clytia hemisphaerica)
ACAAAATAACAGTATATTATTTTGATTAATTCTTCATTTTTCCCGATTCT
CACAGAGCCTTATTCTTTCATTTCGTAATAATTTCTCCATTTTCCCCCAA
CCTCAAAGCAAAAAATAGAGAAAATAATAGAGACAAGGATCTCAATAAAA
TATAATAATTTGATTGTATCTTCTAGAAAAAATACTTTGTATTATTTTTG
CGCACTTTGTATTTAATATGCAAGTTGTATTAAGTTTATTGTGGTTTGGA
AATGACGAAAATTATGTCTCTCGATAGATATTCATAGATATTCAAGTTTC
GTTCATTACTTGATCCACCATTTTGTCCACCATATGGTAACATAGATATT
TTTTTCTCAAGATGGAAAGAAAATGTTCACCACACATCCAGGTCACGCAA
AATATTGAAAATCCATACATCCCGAAAAAGAGGGCTGGAGCGGACTTAAA
CTTTGGGATTATACCCTTTTATTCACGGTATTCATTACCTAATTTTTTTC
TACGGAAACACCCCGGTTTTTTTTTTCTTTACCTTAAGTGACCCCTACTA
CCAAAAAACCGGGGTATTTCCGTAGAAAACAGCATTACGCCATGAATCAT
TTATCGAAATTACAAAAGAACCCAAAACAATACCGGGCGTTTGCCAAAAG
GTGTAACGTTGAAATTTGCCACAAATTGTAAAATGCTGACTGTGTGCATA
TGAAAGACCACTGAAGGTGGTCGCTATATAAGTTGATAAAATCTATTTTT
GTATCATGTACTAATATGGTGAATTATACTTCAATATTCTAATAGCAATA
TTGAAATCTCCATATGTCGACTTGAAGATTCAAAGAAGTTTCCCCATGGC
CATGTGATGCAATGAAAATATATAGATATTGTTTATCACTCTTTTGAAAT
GACTTCCCGTTTCTTTGAGTTAAATCCATAAGCACCCAATTGATACAGAT
AGGATATCAACTCGCATTTTCATTTACTTCTAAATTTTTATGATAATACA
GATATCAAAGTAAAAGTGGATCTCTCTTTCAAACCATCGTTCTCCTCTCA
AGGAGCCTTATGGTCAAAACTCGTCAGCCGTAAGCTTTGGGCGTTCTCAT
ATCTAAGCTCCCTATGGTCAAAACTCATCAGCTGTTGGCTATGGGCGTTC
TCCTCTCTAAGCGCCCTATGGTAAAAACACATCAGCCGTCAACAATGGGA
AAACATAGTTATTACTCTTCCCCAGGACCCTCATCACCAACACCAACAGC
CTCCTCGTCTAAAGTCTGTGCACCATGCGTTGTATCATCTTGCGCATGCG
TTGTATCATCAAAAGTGTCATCTTCAGTTTTTGTCTCATCTCTTTTAATT
TCTTGTTGACCTCCTTCTTTTGGAGAAATCTCTGCTTTTTGTTTCTTGGC
TTTTCGTCGTTGATGTTTCCAAATATCCTTCATCATGGCTTTCAGATCGG
ATAATTTCCCGTTCAGTAGCTCAATGTCGGTCAGTTCGTCGTTAATCTTA
CTGACGCGATCTGTGAGTTGTGTCATGTCGTGTTGTAAGGCTTTCAAACT
GTCTTGCACACTATTTTCTGCTTCCTAGAAATGTAAAAATAAGGCTTATT
AGATATTGGAATGATATGGAATGATTGTTATGACAAAGTGCTCTTACTCT
CTAGTAAAAAATGCATGTCAAGCTTCTGAATTTTATGTCTAAATAATGTT
CAAAATTACGATTTCGTGTACAAAACAGCCATGTATCTTGCCAAAAATGG
GATTATTTGGTTAAGAACATCGGCGTATGCATAGAAAGAGTGCAATTCAG
TTCTTTATTTAGCGGTTTTGTCTGTAATTCACCCCAAAAAGATTATATTT
TGAAATTCGTCACATGCTGTCATATTGAGGGTTTATATGTTGGTTACACA
CGCCTTTGTGAAAAAAAATAAAGAAAATTGACTGAGCCAATCACGAGGAA
AGCTGGTAACAAACGAACGAACGAACGAACGAGTATTAATTGGCAAGACC
TCCTTAGGTAGGTCAAAAAAACAATATTCGAGGATGGTACCCCCCACTAT
CCTGGGGATACAAAAATCGAAAAATGCTCGGGGTTAAAATATTCAGAAAT
TATGCGACTGTCAGACTATTTGAGGCTTACGAAATCTTTGATACATGTTT
GCTAAACAGAAGTCATTCTCTACCTTTGATTTGAGAAGAATTTCTTTAAT
CTTAATATAACTTTTCATGGAGATATTATTTGGAAGATCATCTTTGTTGG
GGCGAAGTTTTTGTGATTTGACGACGAAGCGAGTGCGAAACATTTTTGGT
AACGTGATTTCTGCTTGTAAGCAAATGTCAATCTAAAAATGGAAAGGCAA
TATTGACATTTCATGGTCACAGATGAATCAAGGGAAATGCCGACTGTTTG
CACTTTAGTGCCACAATTTTCAGAAAAAAAATACACAATTTGCTTTACAG
AACTTCAAGTTTCATGTTATTACAATGACCAGCTATAAAAGGCTGATGTG
TAAGACTCATGTTACATTTGAATATGATGTAGGGGGCTGGAACGAGTGAA
AACAANCAAGGCCTTCAAACTGTCTTGTACACTATTTTCTGCTTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008783-exon-sc0000087-1575043694:394087..395625 | TCONS_00008783-exon-sc0000087-1575043694:394087..395625 | Clytia hemisphaerica | exon |
| TCONS_00008783-exon-sc0000087-1575043694:393030..393065 | TCONS_00008783-exon-sc0000087-1575043694:393030..393065 | Clytia hemisphaerica | exon |
| TCONS_00008783-exon-sc0000087-1510915933:394087..395625 | TCONS_00008783-exon-sc0000087-1510915933:394087..395625 | Clytia hemisphaerica | exon |
| TCONS_00008783-exon-sc0000087-1510915933:393030..393065 | TCONS_00008783-exon-sc0000087-1510915933:393030..393065 | Clytia hemisphaerica | exon |
| TCONS_00008783-exon-sc0000087-1491911889:394087..395625 | TCONS_00008783-exon-sc0000087-1491911889:394087..395625 | Clytia hemisphaerica | exon |
| TCONS_00008783-exon-sc0000087-1491911889:393030..393065 | TCONS_00008783-exon-sc0000087-1491911889:393030..393065 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000087 | supercontig | sc0000087:393030..395625 - |
Blast
The following BLAST results are available for this feature:
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