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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008844 ID=TCONS_00008844|Name=TCONS_00008844|organism=Clytia hemisphaerica|type=transcript|length=541bp
ATGATTAACCGTTATTTTTAGTCCATATATAAGTTAGACAGTTTTATGAA
AAAACTTCAAATGGAATAAGACGCAACCAGGAAAAGAACCTCAGAAATAA
CTAAATCTACACTTCGTCATGAAGTGTATTGTCTTTGCtctgtttctttt
gtttactgCCCAGTCAACAAGTGCTTTGACAAGTGGTGGTGGTGATGTGT
GGATACCCAGAGGAGCGAGCGACGCCTTGAACCTCCACAGAAATATGCCA
GGTGGAGTATTTGAGCATTTCAATTTGTTGGCCAAAAAAGGGACGAAATT
CGGACGACCGGACACTTTGACTGAAGAATACGGCGGATATTGATTGTGTG
ATGGAAGTTTGAAGATGGCTATCTTGGATATTATTTTTATTGTAATTTTT
TGTACAAAGTTGAGTTTGAAAAATATTTTGAATAAAATCTACCACAGGAC
GAGTCGACTTCAAACCTTTCTAATAATCCATTCATACTTCTATCCCCTTG
GTATTTAGAAACATTGAAGGAGAAATATATATGATTTAAAG Run BLAST on NCBI transcript from alignment at sc0000088:281215..282338+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008844 ID=TCONS_00008844|Name=TCONS_00008844|organism=Clytia hemisphaerica|type=transcript|length=1124bp|location=Sequence derived from alignment at sc0000088:281215..282338+ (Clytia hemisphaerica)
ATGATTAACCGTTATTTTTAGTCCATATATAAGTTAGACAGTTTTATGAA
AAAACTTCAAATGGAATAAGACGCAACCAGGAAAAGAACCTCAGAAATAA
CTAAATCTACACTTCGTCATGAAGTGTATTGTCTTTGCtctgtttctttt
gtttactgCCCAGTCAACAAGTGCTTTGACAAGTGGTGGTGGTGATGTGT
GGATACCCAGAGGAGCGAGCGACGCCTTGAACCTCCACAGAAATGTAAGT
TATTTAATGTCCTTATNAGAGGAGCGAGCGACGCCTTGAACCTCCACAGA
AATGTAAGTTAATGTCCTTATTCTAGTTCTTTCTTAACTTAGGATTTAGT
CTTATCAAAATTCAGTACACGATTtccttttttgatgttttattgAAGGG
TCGTACCATTTTTTCAAGCTTTGTGCGTTTTAAGTACAGTGGCAAGTTTA
CGTATTTGCCCTTTTGAAGAACTACAGTGGAGTGACTGCAGCGATTTGAA
ATAATCTGGAGTTTTGACCCGAAAAATCGAAGATTGTTAACCGTCCTCAG
Gtagtcaggatctagacaatcagaagctaaccgtccccgcagaaaaacac
agataCATAAACTAGCTAGTATAAGAATTATAATCGAGCGTGAAACCGTT
TTTATTTTAGGAGAGTATGCATACTGTCTGGGATCTAGCTAGGAAACCCT
CAGCCTGCGAGCTTTCGCTGGATCGCGAGAGCTCAGGATTTCCTGGCTAG
TCTAGGTCACATATATCTGTTAAGATTCGAATTTGTTTTTGTGGATTTGG
TCATCTCTGTTTATAATTTTGTTTTAGATGCCAGGTGGAGTATTTGAGCA
TTTCAATTTGTTGGCCAAAAAAGGGACGAAATTCGGACGACCGGACACTT
TGACTGAAGAATACGGCGGATATTGATTGTGTGATGGAAGTTTGAAGATG
GCTATCTTGGATATTATTTTTATTGTAATTTTTTGTACAAAGTTGAGTTT
GAAAAATATTTTGAATAAAATCTACCACAGGACGAGTCGACTTCAAACCT
TTCTAATAATCCATTCATACTTCTATCCCCTTGGTATTTAGAAACATTGA
AGGAGAAATATATATGATTTAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008844-exon-sc0000088-1491911889:281215..281458 | TCONS_00008844-exon-sc0000088-1491911889:281215..281458 | Clytia hemisphaerica | exon |
| TCONS_00008844-exon-sc0000088-1510915933:281215..281458 | TCONS_00008844-exon-sc0000088-1510915933:281215..281458 | Clytia hemisphaerica | exon |
| TCONS_00008844-exon-sc0000088-1575043694:281215..281458 | TCONS_00008844-exon-sc0000088-1575043694:281215..281458 | Clytia hemisphaerica | exon |
| TCONS_00008844-exon-sc0000088-1491911889:282042..282338 | TCONS_00008844-exon-sc0000088-1491911889:282042..282338 | Clytia hemisphaerica | exon |
| TCONS_00008844-exon-sc0000088-1510915933:282042..282338 | TCONS_00008844-exon-sc0000088-1510915933:282042..282338 | Clytia hemisphaerica | exon |
| TCONS_00008844-exon-sc0000088-1575043694:282042..282338 | TCONS_00008844-exon-sc0000088-1575043694:282042..282338 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000088 | supercontig | sc0000088:281215..282338 + |
Blast
The following BLAST results are available for this feature:
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