TCONS_00008850 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008850
Unique NameTCONS_00008850
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2593

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008850 ID=TCONS_00008850|Name=TCONS_00008850|organism=Clytia hemisphaerica|type=transcript|length=2593bp
CCGCAATTGTTTTTTAGTGGCATCAATGATTAAATTTGTAGTTCTAATAG
TTCTAGTTATCATATTCCATTTGACGCTTCTGCAAGGCATACCTTCGATA
AAATCAGaATATTTGTGTATGTTGGAAAGATGGCATtgaattcaacttca
aaaaatctttatgATCATGTTCGAAAATTGAATGTTCAGTTCGAGAGAAC
CAACCGACCAATCATCGAAGCTTTTGGCGAAGAAGTCCACCTTTTCATGC
ATATACATCTAAGAGGATACGACAAAAATGGTGATGGAAAACAAATGCAT
GCTGAATATTATGATAAATTTGGCGCCccaatgaaaaaagaagattcTTG
GCTTGATGGTTTTCGGTCAGTTGAAGAAGAAATAGCAAACCATTTTAACA
AGTGTCAAACAGATGGGTTTGATTTCCCAATGCCAGCTGCAGTCGCTGGC
GGTTCTCATCTTTACGCCATGTATCATTATGATAAACCTTGGAATTGGAC
TGGATTTGTGCCTGGTCAAAAGAAATGGTGCTGTCATAATGAATTCTTTC
AAAACCGACATTTCATGCAAATCCGTGGTAACGAGATCCAAAACAACTTA
TGGGATTATGATCCACACGCAGAGAATGAGGGAAGTTTTGAGTGGGATTT
GAAGTATGACCAAATCGTTCCCGATGATGAATATCACGGTGGTTATTGGT
TTTTCAATAACCCATGGGGAAGATATCTTCATATCATTTCATTGAAATCA
ATGCATCCTGAACCTCAATATTGCAAACGTTACAATTACATTGTTCATCC
GTTGGCTTACCGGGGAGCTGAAACAACATTAGTGGATGAATCGGTCGATG
CAATGCAATGGTCCATCTGTAACGCTAATAACCCAGAACATAACAAAGTT
CCAGAGGGAAGATCGACAGTGATGACCTTTCCAGCTTTTGGTGCAGACCA
ATTAAGTCGATGGGGAGATAGATGTCACGGTGTAGAAGTCTTCAATGATT
TCACATACTATTATTCAGCATCACCCTTGGATGAAGGTACAGATGACCCC
TGGAAAGGTGGGAACGGTTTTCTTTATAACAAAGAAGGAACAGCCAATAA
TTATTTCCATTGGTTCAATTCGTACCCCCTGGAATTTGGTGAATTTCTGG
TGGAGACTTCGTTGAGATACGGAAGTTATATGCAAATGGTGTCCGCCAAT
GATGCTATGTATGTCCGAGAGACAAGAGAAGTCGATAGAGAGACGAAAGA
AACAACTGCAGTGGTGCGAACTGAACCACGCCAACATACAActacaaaac
tcaaaattgatCATCAATTCCATGCTTTGACTTTGAAGAAAACACCAAAG
GAAACCTCGGACCCAGACAATCCAAATCGCACTTTCCTGGGCGGCATGCC
GTATGAGCAGGATACAATATTTGGGTACACCACGTTGATTGATCCTGAGA
TGAAACTGAAGCGTGCAGTTTACGGACCACCACCTCATGTACCTCAAGTC
GCTCAGCTTGATGAAGGGGAAAGCGAAGTCTTGGATTATTTAATCAGCGG
ACGTTTCTTCGGACACACGGGTATTTATGAGATTTTCAACTACCGTGACC
GACACAACAGAATTCAACAAAATTACCCAATCATTGTTGATCAACAAAAT
CCAAGAGCAGCTATCAATACCTTTCTTGACGATCTTCACGTGTTAATTCT
AACCATGCCAAAAGCTCAAAAGAAGGGTGAAGAAAGTTGTAAATCTCAAA
TTATTGCTGAACATATTATTTGGCAATTCACCGTTGAAGTTCATAAGGAG
GATACTAAACAGATTGAATGCCATCGTGGATACTTCAAACTCAATGAAGA
CTACCGAACCAGATTGGATTTGACTGAAAAGATTGACGAGTCAGAAGTAG
CTTGGATACGCATTCAAGCTTATGATGTGAGGAATCCGCAACGCAGAGCT
TGGTTCCAACCTATCAAAGGACCGATGTTCGGGAAAGTCGATTGGAAAAG
GAAGGTCGATTTAAAAACAATACTTAACCCGACGGTCCATAATTATGTGT
ATAATATGGCTGCAACAACAGAAATGCATAAGAGTGAGGATTTCATCGTG
TATCGACCTGAAGATAACTTTGAGCCTGAAGCTTGGAATGCATCAAATTT
GGTGTTTGATTTGGATAAAATCCAagcagaagaagaagatcattTGTGTG
TCTACAACCTTCAAGTTCATTCATTGAAACAATTGTTTGGTCCAGACAAC
AAGAAAACCAGAAATGCTTCAACGGAGCTTCCACCAACTTATCTTCAAAA
CATCTGTGGTGTCATGCAGTTGTCAAGCCAGTATCCAACCAAATTGGATT
TGAACAGCAATTGGGACAAAACCACAGTTAAGGATGGAAATGCCTTCTTC
TATATGGTTGACAAAGATGGAAAGCTCAAAAATATGCCAGAAATGGCAAA
TACAGTTGAATGATTTTGTCGTTTCCTAACCAAGATGGCCGACTTTTACA
GCACATCATATAATTGACTTTATAGTAGTTTTAGTTTATGAATTTACTGT
CATTTACAGTCATAAATATAATATTAACGCAAATATAAATCAT
Run BLAST on NCBI

protein sequence of TCONS_00008850-protein

>TCONS_00008850-protein ID=TCONS_00008850-protein|Name=TCONS_00008850-protein|organism=Clytia hemisphaerica|type=polypeptide|length=777bp
MALNSTSKNLYDHVRKLNVQFERTNRPIIEAFGEEVHLFMHIHLRGYDKN
GDGKQMHAEYYDKFGAPMKKEDSWLDGFRSVEEEIANHFNKCQTDGFDFP
MPAAVAGGSHLYAMYHYDKPWNWTGFVPGQKKWCCHNEFFQNRHFMQIRG
NEIQNNLWDYDPHAENEGSFEWDLKYDQIVPDDEYHGGYWFFNNPWGRYL
HIISLKSMHPEPQYCKRYNYIVHPLAYRGAETTLVDESVDAMQWSICNAN
NPEHNKVPEGRSTVMTFPAFGADQLSRWGDRCHGVEVFNDFTYYYSASPL
DEGTDDPWKGGNGFLYNKEGTANNYFHWFNSYPLEFGEFLVETSLRYGSY
MQMVSANDAMYVRETREVDRETKETTAVVRTEPRQHTTTKLKIDHQFHAL
TLKKTPKETSDPDNPNRTFLGGMPYEQDTIFGYTTLIDPEMKLKRAVYGP
PPHVPQVAQLDEGESEVLDYLISGRFFGHTGIYEIFNYRDRHNRIQQNYP
IIVDQQNPRAAINTFLDDLHVLILTMPKAQKKGEESCKSQIIAEHIIWQF
TVEVHKEDTKQIECHRGYFKLNEDYRTRLDLTEKIDESEVAWIRIQAYDV
RNPQRRAWFQPIKGPMFGKVDWKRKVDLKTILNPTVHNYVYNMAATTEMH
KSEDFIVYRPEDNFEPEAWNASNLVFDLDKIQAEEEDHLCVYNLQVHSLK
QLFGPDNKKTRNASTELPPTYLQNICGVMQLSSQYPTKLDLNSNWDKTTV
KDGNAFFYMVDKDGKLKNMPEMANTVE
Run BLAST on NCBI

transcript from alignment at sc0000088:358202..368106+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008850 ID=TCONS_00008850|Name=TCONS_00008850|organism=Clytia hemisphaerica|type=transcript|length=9905bp|location=Sequence derived from alignment at sc0000088:358202..368106+ (Clytia hemisphaerica)
CCGCAATTGTTTTTTAGTGGCATCAATGATTAAATTTGTAGTTCTAATAG
TTCTAGTTATCATATTCCATTTGACGCTTCTGCAAGGCATACCTTCGATA
AAATCAGGTCAgacatttttctctttcttcttACAATTCTTAATATATGA
CTTTTGTAGAATTAGATAAAGATCATCTTTTACCTttaggcttggggaca
cgagaaagttttttcgcgttggtgcaatgcaacatgctttatcccaccaa
cctgaaacgccttctcgtgtctccatcccatttttcttttaataacattt
gtgcttctctcattttcgtccctgggacaaaatgtgtgacagcgtgtctt
ttgggtattttcatcactttttgtcccatgaaaccaaaaaagaaaccatg
agacacgcactttttttcttgtgttagtgggatggagcatgttgtattgc
accaacgcgaaaaagaaattctcgtgtccccaagccttggCAATGAAAGG
TAGAGGAAGCTAAAAATAAGAGCTAGGAGAATCACATTATCAAAATgtag
attttgaatatattGATACATCGGCATTTATATATAGATCTAGCGATCTA
TAGATAaagcgaccgtagcatgaaggtagagcatccagctacggtgcgca
aggttgagGGTTTGATCCCCAGCCGTGTCATACCAAAGAtccccaaaatg
gtacttgatgcctctctgcttgatgctcagcaactaaagagacgggtcaa
gggtaagtggagaaatccagggaaaggagtggcgcacTTCCTTACCTTCG
GGTCGCCCttgactgcggtcgcaaacttacttacttactacatCGGCATT
TTTATCCGTATTCTGGAATTTTTCTTGATTATAGCTGTGTCGTATTTGGt
gtatttgacataaaagtaaTTTCTACCCTTggaactacaatcatggacaa
aaatgtttgagaaaaacacaGGAATTTGCagtaaaatgtagaaaaaaGCC
CCTTTCCTCAGCTGCAATGTTCAGTCCGCAAGGCTGTCACACCAAGCGTT
GAAAATTGCAAATGggggaaaggggggggggagccGCTTAGAATTAGCTT
TCGTCTCAACATTTTTGTTCATGATTGTAggtgaaatatttaaaatctaa
aaagcAAAAGTTGTTGTTACCACAGTGCAATGAAAAAGTTTATTAGGGTT
TAGGTGAATCATATGATATGGTTTCaacaaaaaaagtaaagaataacGCA
CGTTTGTCATCGTGTACACCACCCCGTTGTAAGAAAGTTACCATCCCCAT
TAATTATATAGAACTTCAAACCGTTTTTCCGGCTTTCAAATTGGACGTGG
TCCTTCTCTTGCGACTCTACAACAAATCTatacaaactttcaaaaatatt
tacctGAATCCGGCTCTTctatactttacttttagaATATTTGTGTATGT
TGGAAAGATGGCATtgaattcaacttcaaaaaatctttatgATCATGTTC
GAAAATTGAATGTTCAGTTCGAGAGAACCAACCGACCAATCATCGAAGCT
TTTGGCGAAGAAGTCCACCTTTTCATGCATATACATCTAAGAGGTATTAc
cctttttaataagaacatcaaaagtttttgaagccttcagatgctcttaa
cttttatAGTTATgagtctaaaaatgtttttaaaatggaGGACtccattt
cttcattttttgagaaataaaattgggttttttgaatctccaaagcctta
aatgttctttaCTTTTAGTATTACGATAATCTTTCAAACTTCAAAGAAAA
TTGTACCCGCCTCATCAATAGCCAAGCCCTCAAATAAAAGAGAACCCAAA
TTAGATGCATTATTAGTCTTTAATAAACTTTTCTTCATAAGAAAGATTCC
GCAGAGTACAGAACACGACTGTGTCTTGAGCTGGTGTAGTACATACAGGC
TTATGGTCTTTTACAAAAGAGAATATATGGCTTATTCATAGGATACGACA
AAAATGGTGATGGAAAACAAATGCATGCTGAATATTATGATAAATTTGGC
GCCccaatgaaaaaagaagattcTTGGCTTGATGGGTAAGCATAATGAAA
TGAGCAACTGATATTTTTAAAACTGAGTTCGCATACTGAGAATAGGTAGG
TTTaagtaccaaaaaaaaagaatgcCTCTAAAAATTTATAATGTGGTCCT
CTATATCATTCGAAGTGTCGATAAGGTTTATTGGCTaaagaaacactttt
tattCACACTCAAAATTTTGAACCTATTTGAGATCAGCTATTTGTAGCAT
CGTCTTTTATCCCCAAACTTTATGTGGCAATTTAATTTCGTCGTTATTTT
CTGCTCAGTTTTCGGTCAGTTGAAGAAGAAATAGCAAACCATTTTAACAA
GTGTCAAACAGATGGGTTTGATTTCCCAATGCCAGCTGCAGTCGCTGGCG
GTTCTCATCTTTACGCCATGTATCATTATGATAAACCTTGGAATTGGACT
GGGTAAGTTTACACTCCCCCTTTGGTATGATTCCATTTCCCCTAGGTACG
ATTACCCTGTCCACGGTTTACGTTTACCTTGTTAATTTTACCTTTCCCCA
TAGGTAAGCTCACCCTTCCCCTGGGTAGGTATATCCTTCCCCATAGGTAA
GTTCACCCTTCCCCTGGGTAGGTATATCCTTCCCCATAGGTAAGCTCACC
CTTCCCCTGGGTAGGTATATCCTTCCCCATAGGTAAGTTCACCCTTTCCC
GTGGAGGAGTTCCTTTTCCGAAGGGTAAATTCATctctgtctcacaaccc
cggtggaacttctcCGTGCAGTTTGGGGAGCTCAACCAAGTCTGTggtga
tggttttggagtgcaaattttctattgaatttcaaatacgTGTGGATCAA
AGTTAAAATCAAAGCTACCttttcagtggggctgaaacTGTGAAGTACTT
TTCCCATCAAGGACAAAATTTCGGCCGAATTTTCTAGTGCCACCGGCTTA
GTGACACAGGGTAAATTCACCATTTCATCTTTTCTTCTGGTTAATTTTAC
CTATTTTTAAGATTTGTGCCTGGTCAAAAGAAATGGTGCTGTCATAATGA
ATTCTTTCAAAACCGACATTTCATGCAAATCCGTGGTAACGAGGTAAAAA
GGCGGCCTTGCAGTGTTCTACGTGTATCGCTCGTGAAATTCAAACATCAT
ACATTATGCAACAATATCGTCTTTCACAAATTAGCCTCAAATAGAAAAAG
TACCAATGTTCTAATATTTCTATACCCCTTTTAGTGCCCAAGtaatagaa
aaaagaaacacAAAGTACGACATAGATACATAATCCATCTGACCGTAACA
GACCAACACACggcaagattttcaaaaagcaaaaatcGGTCTTGTTTGCT
CTGGGGTGGTATAGGCTAATAATTTCCTTTATATTTAGATCCAAAACAAC
TTATGGGATTATGATCCACACGCAGAGAATGAGGGAAGTTTTGAGTGGGA
TTTGAAGTATGACCAAATCGTTCCCGATGATGAATATCACGGTAAAAGAT
TTATGATACATTTGGCGATCCTATGTTActagttttcatttttcacaccC
ACTAAACAACTCTGCGATGTAATTGACACaattttgatacattttgaagt
gaaaatttgataaaaactagtctCCCCAGTCCTCTGGTTCAATGTTAATT
TGAAACACCGTGAGTTGAGAAACACCGTTTTTAAATCACTTTGATCTATC
ATGATTACACAGTTTGAGCTTTAAAAAACTCTTTCATTTTACGTAAGGTG
GTTATTGGTTTTTCAATAACCCATGGGGAAGATATCTTCATATCATTTCA
TTGAAATCAATGCATCCTGAACCTCAATATTGCAAACGTTACAATTACAT
TGTTCATCCGTTGGCTTACCGGGGAGCTGAAACAACATTAGTGGATGAAT
CGGTCGATGCAATGCAATGGTCCATCTGTAACGCTAATAACCCAGAACAT
AACAAAGTTCCAGAGGGAAGGTATATACAGTCAAATCACTCTAATTCTGT
AAATTGAACTAGAATATTGTTCTCATCAGCTTGAAAGTGGCTTAAattac
tctctctctctctctaattcgaatctttctctaattcgacgaaAACTTTT
GGTCTCATCGAATTAAAGAGAATCAACTGTACTTTGAATTATGTATCAAC
GTACCTTAACCATTCTAGTCCAATTTCAAACGTTCTCTTGTCTCCATGAT
AGAGGTCCTCTGCTAATAAcagattgaaaaagaattaaagCCCACCCGTT
GCTTAAAACCAAAAAACCGTTGCTCTTACACGAGGTTGCTCAagctttaa
tgttttttctcaaCAATTTCAGGTTCTTGAttggtaaattttcttttcat
aagTGTTTTATATGGCTTTAATGAGGATTAAGATTACatttttttagtaa
atttttaAGACcgatttttctcaattttcactTAGGTCTTGGCCAAACTT
TTAACCTCTTGTAATCAGTTACAGGGAGTTCTTGCTATAATTTTAGcttt
tattattcgaatccTTTTACATAATTCGAATTAATTCTCAGTTCTCGTTA
ATGAGGAAACCTCGTTTaatattttctataattcgaatcttttggaaatt
tgaacAAATGGAATTTTTCATTCGAGTTTGTATTAGCGTTAGGTCGACTG
TACTCTTTCGGTTCTACTTTACTCAATGGAGATTATGTCTTATTTTAGAT
CGACAGTGATGACCTTTCCAGCTTTTGGTGCAGACCAATTAAGTCGATGG
GGAGATAGATGTCACGGTGTAGAAGTCTTCAATGATTTCACGTAAGAGAA
TATCCTTAATTGATCCCTTCTCTTTAAAATATACTATACACACAACCTTA
CTATATCGTGATACTACATCGGGGAAAGCAAAGATGGGCCTAAGGGAATA
AATTTTGAGGCTAGAGGCAAAAATCTCTCAAATTGAACCTTCCCTTTCTA
TTTTTCCGAgtaattttttatgagattttttgtttttaactttttgagtt
tcaagcctaaaaatgttcttaacatattcttaatataatttttatctatt
ttcttatgagtgtttttgagtccgcAAAGCTAAAATAGTTCTTAATAGTA
CCTCGGCCTAAGGTCTCGaagaagccttatgttcttatataaaaattgta
aattgaCAATATGTTACTGTAGGCTTTCGTAATGGCAATATCATATAGGC
CTCAATTCCCAAGTATTTTAAATCCTTTTTTAGATACTATTATTCAGCAT
CACCCTTGGATGAAGGTACAGATGACCCCTGGAAAGGTGGGAACGGTTTT
CTTTATAACAAAGAAGGAACAGCCAATAATTATTTCCATTGGTTCAATTC
GTACCCCCTGGAATTTGGTGAATTTCTGGTGGAGACTTCGTTGAGATACG
GAAGTTATATGCAAATGGTGTCCGCCAATGATGCTATGTATGTCCGAGAG
ACAAGAGAAGTCGATAGAGGTCAGTTCTTTTTTTAGTTTCAAATATCCAT
GAGGATCTTGGTTTCTTTATTCATAAATGCACAATAAAGTCCATCAATCA
CTGGCAGATTTAAGGAGCAGAATTATAAAAGTGCAAAaacaaattgatca
ttttagaaagattttctgttGAGTTACCAAAGGACCATAGAATACTTTTC
ACACGCAGTGTTTGACATAAAATAAACCCCATAGGCACTACTTCAAAAAG
CgaaatttatttcttttatctCTACAATCACATGTTCCGCTGCAGACCAC
CATGGAAGCAAACATTAAAAagcgttcttttttttttgttgctttttttg
ataacttaagatcattgaaatagaactttaaagataacttttatgtacaa
ccagaagtaagccctgaatactaatgtatcaactactaacgaacaaaact
taatttacaagtgggaatatctaaccaaacaactttgatagcttgaacgg
tcaacttaattttctttatgatgaatcatatagatgaacccatagtcagc
ggccgggtcagaaaattattatttttcacccagccggtttccggaaacac
tacatttcttttatttatctTTTACTCCAACAATTTCAGAGACGAAAGAA
ACAACTGCAGTGGTGCGAACTGAACCACGCCAACATACAActacaaaact
caaaattgatCATCAATTCCATGCTTTGACTTTGAAGAAAACACCAAAGG
AAACCTCGGACCCAGACAATCCAAATCGCACTTTCCTGGGCGGCATGCCG
TATGAGCAGGATACAATATTTGGGTaagtttttaatgtttttttctgtGT
CCTattatagtagggggccaagtcTCAGGTCCCGTGGTAACTTTTATAGG
ACTAAGCAAAACCTGTTCTATTTCAAAGTTTAGTATATAATTAGAATTTt
ttgtgaccaaaatagtgacgcaaaactgcaagggaaaataaggggtagag
aaatagcttattttcaaaagtcaaaataaacgaaaatgattggtaccatc
tgatagagcatgaaattctgagcaaaaattgtattacaacaactctctga
ctaaaaccatggacatataaacgactggacatccatctcctttgtctttt
tgaagataacacagctagcttcgttgccgcctcgttaaaagcataaaatg
aaacaatagattttgatgatataccacttgggaataccttgctaacaacg
tcaaaacttcgataaaagtctctgttgttctactcctctcaagtctttta
tttatatcatagcaaagataacagaggcaaaatcatcgtcagcttgtcaa
aactctgactaatatttcaaaattttgacttaaaagtgtctaataatttt
cgagagtgtcacattctaatttcgatattcttattacacaggctctcaac
ttcggcaagctatttttttcaagtcataaaaaaaattattggagtgacaa
aagggattcaaaagtatacacgcagttgaaattctgcattccagagttga
aaaagttgataaaatatattacaaacttgtaaaaaaattcgaaaataatt
tttttgtgcattaggagtaatgttcaagttctatcaatttttttacctaa
ataattcaaagaaaaaaaattatgacggaatattgtcggatttttcatac
caattttgaaaaacaggcggcaacgaagctcgcttcaaagagacaataaa
agatagatgtccagtcgtttatatgttcatgctaaaacacacaaagaaat
acagctgatttaagaccaactaactgtcagcaTTACCTCGAGCATTACTt
tgaatttgacgtcaaatcttgccttgatcgtactgacgtcagtatgtttt
tgaacttcgaGTATTATGTTTAATTACATGCCGCTTAGTACTGCTATAAA
AACTAGAATAACATTTATAACGGGATGCAGTGCGGTAAAACCACTTTACA
GATTTCATATACAGGCCAATGTAATTTGTTCACTTGAAGCGATTTCGCCA
CAGAACAGAGCATTAAGTAGTTGAAGAGAACTCTGGTGACAACGGCAGTC
AAGTTCGCTTAACCGAATCACTCGTTACAGATGAGTTTTTAAGGCAGGAA
CAAGTCTAACGATTAAATAACTCAAATCTATACTTGAAGGTACACCACGT
TGATTGATCCTGAGATGAAACTGAAGCGTGCAGTTTACGGACCACCACCT
CATGTACCTCAAGTCGCTCAGCTTGATGAAGGGGAAAGCGAAGTCTTGGA
TTATTTAATCAGCGGACGTTTCTTCGGACACACGGGTGAGCAGTTGACAc
tttctaattcgacgttctaccaTTCAATACGCTCCGTTATTCGAGAGTAT
TAAAAGTCATCGTCAAcaaagaaactctcataaacgacactctattattc
gatttgctcccttattcgatgaaaatccaattccccttaaAAATCGATTA
AGAGAGTTTCAACTATAGCTTCTATACCACTAAGTCTTTGACGAAGTCCT
TCCTTTATACCCACAGATATCTCATTTAAAACACTAGATGGAGCTACTCC
GTCCCTAGCTGATGCAAAATAATTCGCCATCTTTGATAAGTAGACAATGT
TCGCGCACGCctatcagttttttttttacttggttgaacaaattgccggt
accaAACTGTAACCTACCTattttcagcaaagatggcgcaCTATTTTGCT
TCACATGctgttgcttgggaaatacagagtagctctatctagtgttttat
ataagatatctatgtTTATACCTTCTCCAGGTATTTATGAGATTTTCAAC
TACCGTGACCGACACAACAGAATTCAACAAAATTACCCAATCATTGTTGA
TCAACAAAATCCAAGAGCAGCTATCAATACCTTTCTTGACGATCTTCACG
TGTTAATTCTAACCATGCCAAAAGCTCAAAAGAAGGGTGAAGAAAGTTGT
AAATCTCAAATTATTGCTGAACATATTATTTGGCAATTCACCGTTGAAGT
TCATAAGGAGGATACTAAACAGATTGAATGCCATCGTGGATACTTCAAAC
TCAATGAAGACTACCGAACCAGATTGGATTTGACTGAAAAGATTGACGAG
TCAGAAGTAGCTTGGATACGCATTCAAGCTTATGATGTGAGGAATCCGCA
ACGCAGAGCTTGGTTCCAACCTATCAAAGGACCGATGTTCGGGAAAGTCG
ATTGTAAGTTTACTTGCTGTTCGAATTCGTGGTTCCAATGACTCAAAAGT
CCGTTTTGACACTGCCCCCAGTTCCCAAACCCCTTTCTCGCTGACCCTTT
CATCTCTACTTTCTCCAGGGACCAAACCCCTGTTCCAATtaaccaataga
cctttttacaaCTTTATCCTGCAAGATTTTGCAAACGACTCGaatttttt
caatataattttcaaCTATATCTTAGCTACTTATGAAAAGTACGTTAAAG
GAATTTGAATGGGAACTTCCGGCCGGTATCGATTGGTTGAAAGGTTGAGC
TTGTCAAAAATCAttggtacacatttttttaataagaacaaataaGTTAT
GAGCATTTTTAGCTTCgcgggctctaaaacacccgattgcTTAGGAGAAT
GGAcatatgctcaaaaaatggtgaaaataagaaaatgatataaacatttt
aaggcttaaaactcaaaaggttaagaacatctgaaagctttaaagatttt
tatatgTTCTAATTAAAAAACGTTCTCTTTATAATTTATTTCATCTGAAA
AACAGGGAAAAGGAAGGTCGATTTAAAAACAATACTTAACCCGACGGTCC
ATAATTATGTGTATAATATGGCTGCAACAACAGAAATGCATAAGAGTGAG
GATTTCATCGTGTATCGACCTGAAGATAACTTTGAGCCTGAAGCTTGGAA
TGCATCAAATTTGGTGTTTGATTTGGATAAAATCCAagcagaagaagaag
atcattTGTGTGTCTACAACCTTCAAGTTCATTCATTGAAACAATTGTTT
GGTCCAGACAACAAGAAAACCAGAAATGCTTCAACGGAGCTTCCACCAAC
TTATCTTCAAAACATCTGTGGTGTCATGCAGTTGTCAAGCCAGTATCCAA
CCAAATTGGATTTGAACAGCAATTGGGACAAAACCACAGTTAAGGATGGA
AATGCCTTCTTCTATATGGTTGACAAAGATGGAAAGCTCAAAAATATGCC
AGAAATGGCAAATACAGTTGAATGATTTTGTCGTTTCCTAACCAAGATGG
CCGACTTTTACAGCACATCATATAATTGACTTTATAGTAGTTTTAGTTTA
TGAATTTACTGTCATTTACAGTCATAAATATAATATTAACGCAAATATAA
ATCAT

Coding sequence (CDS) from alignment at sc0000088:358202..368106+

>TCONS_00008850 ID=TCONS_00008850|Name=TCONS_00008850|organism=Clytia hemisphaerica|type=CDS|length=2334bp|location=Sequence derived from alignment at sc0000088:358202..368106+ (Clytia hemisphaerica)
ATGGCATtgaattcaacttcaaaaaatctttatgATCATGTTCGAAAATT
GAATGTTCAGTTCGAGAGAACCAACCGACCAATCATCGAAGCTTTTGGCG
AAGAAGTCCACCTTTTCATGCATATACATCTAAGAGGATACGACAAAAAT
GGTGATGGAAAACAAATGCATGCTGAATATTATGATAAATTTGGCGCCcc
aatgaaaaaagaagattcTTGGCTTGATGGTTTTCGGTCAGTTGAAGAAG
AAATAGCAAACCATTTTAACAAGTGTCAAACAGATGGGTTTGATTTCCCA
ATGCCAGCTGCAGTCGCTGGCGGTTCTCATCTTTACGCCATGTATCATTA
TGATAAACCTTGGAATTGGACTGGATTTGTGCCTGGTCAAAAGAAATGGT
GCTGTCATAATGAATTCTTTCAAAACCGACATTTCATGCAAATCCGTGGT
AACGAGATCCAAAACAACTTATGGGATTATGATCCACACGCAGAGAATGA
GGGAAGTTTTGAGTGGGATTTGAAGTATGACCAAATCGTTCCCGATGATG
AATATCACGGTGGTTATTGGTTTTTCAATAACCCATGGGGAAGATATCTT
CATATCATTTCATTGAAATCAATGCATCCTGAACCTCAATATTGCAAACG
TTACAATTACATTGTTCATCCGTTGGCTTACCGGGGAGCTGAAACAACAT
TAGTGGATGAATCGGTCGATGCAATGCAATGGTCCATCTGTAACGCTAAT
AACCCAGAACATAACAAAGTTCCAGAGGGAAGATCGACAGTGATGACCTT
TCCAGCTTTTGGTGCAGACCAATTAAGTCGATGGGGAGATAGATGTCACG
GTGTAGAAGTCTTCAATGATTTCACATACTATTATTCAGCATCACCCTTG
GATGAAGGTACAGATGACCCCTGGAAAGGTGGGAACGGTTTTCTTTATAA
CAAAGAAGGAACAGCCAATAATTATTTCCATTGGTTCAATTCGTACCCCC
TGGAATTTGGTGAATTTCTGGTGGAGACTTCGTTGAGATACGGAAGTTAT
ATGCAAATGGTGTCCGCCAATGATGCTATGTATGTCCGAGAGACAAGAGA
AGTCGATAGAGAGACGAAAGAAACAACTGCAGTGGTGCGAACTGAACCAC
GCCAACATACAActacaaaactcaaaattgatCATCAATTCCATGCTTTG
ACTTTGAAGAAAACACCAAAGGAAACCTCGGACCCAGACAATCCAAATCG
CACTTTCCTGGGCGGCATGCCGTATGAGCAGGATACAATATTTGGGTACA
CCACGTTGATTGATCCTGAGATGAAACTGAAGCGTGCAGTTTACGGACCA
CCACCTCATGTACCTCAAGTCGCTCAGCTTGATGAAGGGGAAAGCGAAGT
CTTGGATTATTTAATCAGCGGACGTTTCTTCGGACACACGGGTATTTATG
AGATTTTCAACTACCGTGACCGACACAACAGAATTCAACAAAATTACCCA
ATCATTGTTGATCAACAAAATCCAAGAGCAGCTATCAATACCTTTCTTGA
CGATCTTCACGTGTTAATTCTAACCATGCCAAAAGCTCAAAAGAAGGGTG
AAGAAAGTTGTAAATCTCAAATTATTGCTGAACATATTATTTGGCAATTC
ACCGTTGAAGTTCATAAGGAGGATACTAAACAGATTGAATGCCATCGTGG
ATACTTCAAACTCAATGAAGACTACCGAACCAGATTGGATTTGACTGAAA
AGATTGACGAGTCAGAAGTAGCTTGGATACGCATTCAAGCTTATGATGTG
AGGAATCCGCAACGCAGAGCTTGGTTCCAACCTATCAAAGGACCGATGTT
CGGGAAAGTCGATTGGAAAAGGAAGGTCGATTTAAAAACAATACTTAACC
CGACGGTCCATAATTATGTGTATAATATGGCTGCAACAACAGAAATGCAT
AAGAGTGAGGATTTCATCGTGTATCGACCTGAAGATAACTTTGAGCCTGA
AGCTTGGAATGCATCAAATTTGGTGTTTGATTTGGATAAAATCCAagcag
aagaagaagatcattTGTGTGTCTACAACCTTCAAGTTCATTCATTGAAA
CAATTGTTTGGTCCAGACAACAAGAAAACCAGAAATGCTTCAACGGAGCT
TCCACCAACTTATCTTCAAAACATCTGTGGTGTCATGCAGTTGTCAAGCC
AGTATCCAACCAAATTGGATTTGAACAGCAATTGGGACAAAACCACAGTT
AAGGATGGAAATGCCTTCTTCTATATGGTTGACAAAGATGGAAAGCTCAA
AAATATGCCAGAAATGGCAAATACAGTTGAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004968XLOC_004968Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008850-exon-sc0000088-1491911889:358202..358308TCONS_00008850-exon-sc0000088-1491911889:358202..358308Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1510915933:358202..358308TCONS_00008850-exon-sc0000088-1510915933:358202..358308Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1575043694:358202..358308TCONS_00008850-exon-sc0000088-1575043694:358202..358308Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1491911889:359637..359794TCONS_00008850-exon-sc0000088-1491911889:359637..359794Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1510915933:359637..359794TCONS_00008850-exon-sc0000088-1510915933:359637..359794Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1575043694:359637..359794TCONS_00008850-exon-sc0000088-1575043694:359637..359794Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1491911889:360193..360286TCONS_00008850-exon-sc0000088-1491911889:360193..360286Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1510915933:360193..360286TCONS_00008850-exon-sc0000088-1510915933:360193..360286Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1575043694:360193..360286TCONS_00008850-exon-sc0000088-1575043694:360193..360286Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1491911889:360560..360703TCONS_00008850-exon-sc0000088-1491911889:360560..360703Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1510915933:360560..360703TCONS_00008850-exon-sc0000088-1510915933:360560..360703Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1575043694:360560..360703TCONS_00008850-exon-sc0000088-1575043694:360560..360703Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1491911889:361263..361344TCONS_00008850-exon-sc0000088-1491911889:361263..361344Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1510915933:361263..361344TCONS_00008850-exon-sc0000088-1510915933:361263..361344Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1575043694:361263..361344TCONS_00008850-exon-sc0000088-1575043694:361263..361344Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1491911889:361640..361742TCONS_00008850-exon-sc0000088-1491911889:361640..361742Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1510915933:361640..361742TCONS_00008850-exon-sc0000088-1510915933:361640..361742Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1575043694:361640..361742TCONS_00008850-exon-sc0000088-1575043694:361640..361742Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1491911889:361999..362221TCONS_00008850-exon-sc0000088-1491911889:361999..362221Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1510915933:361999..362221TCONS_00008850-exon-sc0000088-1510915933:361999..362221Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1575043694:361999..362221TCONS_00008850-exon-sc0000088-1575043694:361999..362221Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1491911889:362950..363042TCONS_00008850-exon-sc0000088-1491911889:362950..363042Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1510915933:362950..363042TCONS_00008850-exon-sc0000088-1510915933:362950..363042Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1575043694:362950..363042TCONS_00008850-exon-sc0000088-1575043694:362950..363042Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1491911889:363485..363720TCONS_00008850-exon-sc0000088-1491911889:363485..363720Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1510915933:363485..363720TCONS_00008850-exon-sc0000088-1510915933:363485..363720Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1575043694:363485..363720TCONS_00008850-exon-sc0000088-1575043694:363485..363720Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1491911889:364341..364524TCONS_00008850-exon-sc0000088-1491911889:364341..364524Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1510915933:364341..364524TCONS_00008850-exon-sc0000088-1510915933:364341..364524Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1575043694:364341..364524TCONS_00008850-exon-sc0000088-1575043694:364341..364524Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1491911889:365891..366036TCONS_00008850-exon-sc0000088-1491911889:365891..366036Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1510915933:365891..366036TCONS_00008850-exon-sc0000088-1510915933:365891..366036Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1575043694:365891..366036TCONS_00008850-exon-sc0000088-1575043694:365891..366036Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1491911889:366532..366954TCONS_00008850-exon-sc0000088-1491911889:366532..366954Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1510915933:366532..366954TCONS_00008850-exon-sc0000088-1510915933:366532..366954Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1575043694:366532..366954TCONS_00008850-exon-sc0000088-1575043694:366532..366954Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1491911889:367507..368106TCONS_00008850-exon-sc0000088-1491911889:367507..368106Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1510915933:367507..368106TCONS_00008850-exon-sc0000088-1510915933:367507..368106Clytia hemisphaericaexon
TCONS_00008850-exon-sc0000088-1575043694:367507..368106TCONS_00008850-exon-sc0000088-1575043694:367507..368106Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008850-proteinTCONS_00008850-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000088supercontigsc0000088:358202..368106 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.669672	0.464381	0.269595	0.164848	0.060206	0.0634341	19.037	21.9598	49.9611	29.5134	22.249	24.1533	7.61437	6.49597	23.7959	27.4229	1.98854	1.70612	2.56275	2.21823	0.0863303	0.0210544	0.204755	0.356792	0.271621	0.199636	0	0	0.0495523	0.0336573
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008850 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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