TCONS_00008923 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008923
Unique NameTCONS_00008923
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length236

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008923 ID=TCONS_00008923|Name=TCONS_00008923|organism=Clytia hemisphaerica|type=transcript|length=236bp
AACAACCAAGAGGCTGCAACCTAGGTACCAAGTGCCAAAGCTTCCACCCG
AGGATGTGCTCATCATCTATTACAAGAGGGGAATGCTTTAATCTTGACTG
CGAATTCACGCATGTTAAGGGAACCAAACAACAttagaaaaagcaaaaca
atcgtAATGATGAACCTCAGGATTTTCTCGCAATCCTGGACAACTTTCGC
ACAGAAATAATCTCTCTTGTGAACAATTGTTTCAGC
Run BLAST on NCBI

transcript from alignment at sc0000088:256176..256411

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008923 ID=TCONS_00008923|Name=TCONS_00008923|organism=Clytia hemisphaerica|type=transcript|length=236bp|location=Sequence derived from alignment at sc0000088:256176..256411 (Clytia hemisphaerica)
GCTGAAACAATTGTTCACAAGAGAGATTATTTCTGTGCGAAAGTTGTCCA
GGATTGCGAGAAAATCCTGAGGTTCATCATTacgattgttttgctttttc
taaTGTTGTTTGGTTCCCTTAACATGCGTGAATTCGCAGTCAAGATTAAA
GCATTCCCCTCTTGTAATAGATGATGAGCACATCCTCGGGTGGAAGCTTT
GGCACTTGGTACCTAGGTTGCAGCCTCTTGGTTGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005002XLOC_005002Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008923-exon-sc0000088-1491911889:256176..256411TCONS_00008923-exon-sc0000088-1491911889:256176..256411Clytia hemisphaericaexon
TCONS_00008923-exon-sc0000088-1510915933:256176..256411TCONS_00008923-exon-sc0000088-1510915933:256176..256411Clytia hemisphaericaexon
TCONS_00008923-exon-sc0000088-1575043694:256176..256411TCONS_00008923-exon-sc0000088-1575043694:256176..256411Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000088supercontigsc0000088:256176..256411 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.71484	3.62159	9.55292	1.06261	1.29362	5.34054	9.21063	7.57337	7.86364	5.04101	3.01506	10.7074	7.17696	9.07663	2.24554	2.40653	1.53274	0.738095	2.14577	0	2.78241	2.84289	2.19974	1.99989	9.52457	0.919177	6.5767	6.22066	2.19307	1.14235
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008923 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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