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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009043 ID=TCONS_00009043|Name=TCONS_00009043|organism=Clytia hemisphaerica|type=transcript|length=721bp
CTAGCCGCAAGCGTGCAGAGCTTCAACGAAAGCGACAATGTCAATCATCA
GATTCGCCTGGAACCCATTACCAGTGGTGCGGAATTGGAGGTATTCACTG
ACGAATCTCATTCACTTTTCTCGAGTGAAGAAGGTGACAGATCAATCCTG
TCAACGGAAATCAGTATGGACAATGCGCATTCACAGATACCTCAACAACA
AATCGCCATATTACAGAATGTCAAAGCACTGTTGAACCGTTTAGATGAGC
AATGTGTGAAAACTAAAGAACAATTACTGAAGGAGCGAGAACGCACTGGC
AACCTTCAAGCTCAGATTGATGCGCATGCGTACAGGAGAATTCATGCTCT
ACCAATGGCTGTGCAAAGAGAACATGAGAAGTGTGCTTATAATATTCAAG
AATTGAAATGGCATTGTGCATACGAAGGTCGAAGAATGTCAAGCGTCAAA
GAGAAATATCGTATCGCCCAGAAAACCAACGAAAGAATATTGGaggaaat
caattttgtaaaggAAAGCAGCCCTTTGATATCTGAGAAACAGCGAGAAG
AAAAAGAATCGATGAAAGTGATCCAACAAAAACAGAACACAGCAGACATC
GAACTCAAAGAGGCTAGAAATAACTTAGATATGATCGAGCGACGTTTCGA
ACAAACAAAACGCCAAGCGGATCAAGAAGAGAAATATCTGGCTCAACGAT
TGCTGGCACTGGCTAATGAGC Run BLAST on NCBI protein sequence of TCONS_00009043-protein >TCONS_00009043-protein ID=TCONS_00009043-protein|Name=TCONS_00009043-protein|organism=Clytia hemisphaerica|type=polypeptide|length=240bp
LAASVQSFNESDNVNHQIRLEPITSGAELEVFTDESHSLFSSEEGDRSIL
STEISMDNAHSQIPQQQIAILQNVKALLNRLDEQCVKTKEQLLKERERTG
NLQAQIDAHAYRRIHALPMAVQREHEKCAYNIQELKWHCAYEGRRMSSVK
EKYRIAQKTNERILEEINFVKESSPLISEKQREEKESMKVIQQKQNTADI
ELKEARNNLDMIERRFEQTKRQADQEEKYLAQRLLALANE Run BLAST on NCBI transcript from alignment at sc0000089:6399..7119 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009043 ID=TCONS_00009043|Name=TCONS_00009043|organism=Clytia hemisphaerica|type=transcript|length=721bp|location=Sequence derived from alignment at sc0000089:6399..7119 (Clytia hemisphaerica)
GCTCATTAGCCAGTGCCAGCAATCGTTGAGCCAGATATTTCTCTTCTTGA
TCCGCTTGGCGTTTTGTTTGTTCGAAACGTCGCTCGATCATATCTAAGTT
ATTTCTAGCCTCTTTGAGTTCGATGTCTGCTGTGTTCTGTTTTTGTTGGA
TCACTTTCATCGATTCTTTTTCTTCTCGCTGTTTCTCAGATATCAAAGGG
CTGCTTTcctttacaaaattgatttcctCCAATATTCTTTCGTTGGTTTT
CTGGGCGATACGATATTTCTCTTTGACGCTTGACATTCTTCGACCTTCGT
ATGCACAATGCCATTTCAATTCTTGAATATTATAAGCACACTTCTCATGT
TCTCTTTGCACAGCCATTGGTAGAGCATGAATTCTCCTGTACGCATGCGC
ATCAATCTGAGCTTGAAGGTTGCCAGTGCGTTCTCGCTCCTTCAGTAATT
GTTCTTTAGTTTTCACACATTGCTCATCTAAACGGTTCAACAGTGCTTTG
ACATTCTGTAATATGGCGATTTGTTGTTGAGGTATCTGTGAATGCGCATT
GTCCATACTGATTTCCGTTGACAGGATTGATCTGTCACCTTCTTCACTCG
AGAAAAGTGAATGAGATTCGTCAGTGAATACCTCCAATTCCGCACCACTG
GTAATGGGTTCCAGGCGAATCTGATGATTGACATTGTCGCTTTCGTTGAA
GCTCTGCACGCTTGCGGCTAG Coding sequence (CDS) from alignment at sc0000089:6399..7119 >TCONS_00009043 ID=TCONS_00009043|Name=TCONS_00009043|organism=Clytia hemisphaerica|type=CDS|length=720bp|location=Sequence derived from alignment at sc0000089:6399..7119 (Clytia hemisphaerica)
CTCATTAGCCAGTGCCAGCAATCGTTGAGCCAGATATTTCTCTTCTTGAT
CCGCTTGGCGTTTTGTTTGTTCGAAACGTCGCTCGATCATATCTAAGTTA
TTTCTAGCCTCTTTGAGTTCGATGTCTGCTGTGTTCTGTTTTTGTTGGAT
CACTTTCATCGATTCTTTTTCTTCTCGCTGTTTCTCAGATATCAAAGGGC
TGCTTTcctttacaaaattgatttcctCCAATATTCTTTCGTTGGTTTTC
TGGGCGATACGATATTTCTCTTTGACGCTTGACATTCTTCGACCTTCGTA
TGCACAATGCCATTTCAATTCTTGAATATTATAAGCACACTTCTCATGTT
CTCTTTGCACAGCCATTGGTAGAGCATGAATTCTCCTGTACGCATGCGCA
TCAATCTGAGCTTGAAGGTTGCCAGTGCGTTCTCGCTCCTTCAGTAATTG
TTCTTTAGTTTTCACACATTGCTCATCTAAACGGTTCAACAGTGCTTTGA
CATTCTGTAATATGGCGATTTGTTGTTGAGGTATCTGTGAATGCGCATTG
TCCATACTGATTTCCGTTGACAGGATTGATCTGTCACCTTCTTCACTCGA
GAAAAGTGAATGAGATTCGTCAGTGAATACCTCCAATTCCGCACCACTGG
TAATGGGTTCCAGGCGAATCTGATGATTGACATTGTCGCTTTCGTTGAAG
CTCTGCACGCTTGCGGCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009043-exon-sc0000089-1491911889:6399..7119 | TCONS_00009043-exon-sc0000089-1491911889:6399..7119 | Clytia hemisphaerica | exon |
| TCONS_00009043-exon-sc0000089-1510915933:6399..7119 | TCONS_00009043-exon-sc0000089-1510915933:6399..7119 | Clytia hemisphaerica | exon |
| TCONS_00009043-exon-sc0000089-1575043694:6399..7119 | TCONS_00009043-exon-sc0000089-1575043694:6399..7119 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089 | supercontig | sc0000089:6399..7119 . |
Blast
The following BLAST results are available for this feature:
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