TCONS_00009083 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009083
Unique NameTCONS_00009083
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1395

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009083 ID=TCONS_00009083|Name=TCONS_00009083|organism=Clytia hemisphaerica|type=transcript|length=1395bp
ATAAAGAAGATGGCATTGAAATTCATATTTATCGTATTTTGTTTAGTAAT
ATGTTATGCATGTTCACAAAAAGTTGCTGATAAACCGCGAGGCTCGACAG
ACAATAACAGTCTTACTACAACACAAAAAcaactcgaaaaattatcgaCA
ACGCTTTCGGTTGCCGGTAAAATCAACACGCTCAACAAAAATGAAGTATC
TCCTACGGTACAAACAACAGACAAGAGACAACAAGATGAAAAAGATCGCG
TCCGTTACGAGAAATGGAAGAAACGGCGTCAGTGGCAACGTAATAAGGCT
TGGAAACGTGGACAACGTGAACGACAACGTAAGGAAAGGGAGAAACGGAG
AGAACGCCAGCGACACGACGATGatgacgacgacgacgacgaggatgATC
ACAACAAACCAAACGTTATCTACATCACCTCTACAATAGCTGCCATCTTT
ATTGTTTGTTTCGTTGCCTTGGTGACCTGGCATTTAAAAGAGACTGATCG
ATTATGTTTCAAACAAAACGAAAATCAACGCCGAAACACGAACAGCAGTC
AAAGAGCATTCGCTAGGAGATCCAAAATGAATTCTTCGATTGCTAAACCA
TTTCCTAAACCTTATCCAGGAGAAAAGTTTACTAATGGTGTTTTATCCAA
GAATTTCATTAATTCTGTAGTGATTGAAAACATTTCTGTCTCTTACAGCT
CACCGTCAAATAAAGAAgctcaaaatgaaacaaaacttgAGGAGTTTCAG
AAGCAAGATTCTATGCTATCTACTGAAAAATCTACATCTGATGTATTGGA
AAAAACGGTTTCTGACACTTTAAGTGAGACGCTGACATCTTTGCAAATTC
CTGCCAACAAAAGTAACAGCCCAAGCCAACATTCTTTATCACACCCAGGG
TCGTCATATTTACGTCATAGTGACTTCATCATCGGTGACGTAatgaatga
cgtcattgttgatATAAAGCAATTGTATCAACAATGTGAACATTCTAAAG
ATGAAATTTGTTCAACGAATAAAGGCGCTATTGAAAGTTCAGACAATGCC
GTAAATGAGAATTCTGACCTCGTAAACAAAAATTCCATTAAAAGTAGCGT
AACAAGAGACTCAGAACTCTCAATCAAAGACTTCATTACCGAGAATAAAT
GTAATGACGATCTTGAAGAACATATTAATAATGGAgacttaaaaattgaa
attgaagtcGCTTCAAATGTTGATGAGAAACAAACAGCGGTTGTAATTAC
GGCTTAAAACTCGGCtgagagattttttttgagaCATCTCGTTTTGAAGT
ACTCTTAGGTCCCTAATAAACGAAGGGGGGAGGTTGGAACAAGCGAAGTG
AGGGTTGGAAAAACTTCGAATTTGAAGAAACGTCAGggtttggaa
Run BLAST on NCBI

protein sequence of TCONS_00009083-protein

>TCONS_00009083-protein ID=TCONS_00009083-protein|Name=TCONS_00009083-protein|organism=Clytia hemisphaerica|type=polypeptide|length=418bp
IKKMALKFIFIVFCLVICYACSQKVADKPRGSTDNNSLTTTQKQLEKLST
TLSVAGKINTLNKNEVSPTVQTTDKRQQDEKDRVRYEKWKKRRQWQRNKA
WKRGQRERQRKEREKRRERQRHDDDDDDDDEDDHNKPNVIYITSTIAAIF
IVCFVALVTWHLKETDRLCFKQNENQRRNTNSSQRAFARRSKMNSSIAKP
FPKPYPGEKFTNGVLSKNFINSVVIENISVSYSSPSNKEAQNETKLEEFQ
KQDSMLSTEKSTSDVLEKTVSDTLSETLTSLQIPANKSNSPSQHSLSHPG
SSYLRHSDFIIGDVMNDVIVDIKQLYQQCEHSKDEICSTNKGAIESSDNA
VNENSDLVNKNSIKSSVTRDSELSIKDFITENKCNDDLEEHINNGDLKIE
IEVASNVDEKQTAVVITA
Run BLAST on NCBI

transcript from alignment at sc0000090:77975..87990+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009083 ID=TCONS_00009083|Name=TCONS_00009083|organism=Clytia hemisphaerica|type=transcript|length=10016bp|location=Sequence derived from alignment at sc0000090:77975..87990+ (Clytia hemisphaerica)
ATAAAGAAGATGGCATTGAAATTCATATTTATCGTATTTTGTTTAGTAAT ATGTTATGCATGTTCACAAAAAGGTAACACGACATAAATTTGCTTTTTAA ACTGACTTGCTTGTTTAAGAGTGTTTTACAACACCTGCGGATATGTTGGA TGTTGAATACTTTCATACTCTCTAGGGTATTAATTGCTCCCGAAGGGAGC CTATGTTGTTTCACGAGGCCGTGCTGGGGATCGAGCtggcgaaaaattgt tcaagaaaaaaaacggGACGATGTAACCTAGTGACTGCATCTACTAAAAG ATTGCCGTGTGGTGAGCTTTTAAGCTAGCTCGACCGCGCGAACAGatatt ttgcgtttttggctctccaaagtcatagcttggaatacaacaacaccgcg tgaacagaaatttagcatctttagcgctccaaagtcatagcttggaatac aacaacaaaaagcAACGAAGCAACTTGGGACCAGTTGGTTTCAGAAAGTA GAAGGTATAATAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgttgttttttca aagaaaatgcttttgagaagaaagtCATTCTAAATATTTCCTGAAGATTA TTCCAAGACCCTgcctataaaacatgaaaagctTTGTAATTTAAGCTTTA TAAGGTATCTATTAAAGGGGGGCATGTTTAGTGCAAGCTATGGCTGAGAA AAATACTTTGCAATATCActgtatttctgacaaaaataaacacaacattt cgccttttctgaatttcaatcaatcactgtcaaatgcctgtcatcgggag catcatagcgaaagctacttgctagtcTAGTCTATTACGCCGACATTAAG TATTTACGCCGTCTATTAAGGCGTagtggtgtagtggttatcgtgcttga cttctgtccaggaggctcgagttcgatacccaccgtggcactacgattca cttggcaagtgaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNATAtttcagacattgtggtgtgccgTGACACTcaggagg ttctacacctgcgaggacatccgttctcccgtgtagttcgagtgtcgtgg tatacatCATGGCTCtgcagctcgcatctgcagggttgcaatgtctgctt gcgctgtgattcctactccatcgtgggtaggacccattccgatgcatcgg agggcatatctatcaATTACGCCGACATGGTTTCTACATAGTGCAAAGAA AGGCTTAAAGCGAATGGATTACCGTATAACTgaatatttatttaattttt tcgattttatgaggggcgtttattcgagggggcgtttaaaagaagagggc gtttattaaattatttgagtctaacgtcgaatatttagagcaaatctact tttgttttagttttatACCAGGATTTCAGTGCAAATTTCTTTGGGTCGGC GACTAAAATTGCATCAAAACTGATCTGGttacaaaaaaaactaaaatctt cTTTAATCAAAACTTGTATCAAAGTATACTTGtatcaaaagtttctaata aacgcccctcccctaGAGGGGGCGTTCATttgaagggggcgtttatttga gggagGCCGTTtgttaaataattttcctttaaggaggggcgtttattcca GGGGGcgttaaaaaaaaggggggTTTATTCGAAGTAGTACGGTATAGGAA GCGAAACAATGAATGGATTATAGGAATCGAAACCTAGGATGACTTTTGAC CCTTATTTAGCTTCTTGCTCAACTATCATTGATTTCCATTTTAAGTAGAT GAACTTATTGATATTTAAAATCCTGATCGGAATTGTATCGGGGAATTCCG TTGAACGGGAAATATCGGGAAACTAATTATCACGTGTGAGTGTATTCATA TGATATTGCGCTCTCATGAGTCTTTTGATAGATCGTTGACAggattttca ttaggtcaaacaAAACTATTGATAAACGATGTGGGTGTTGGGTGCTGATA GCACGATACTGGCATACTTagcctgataacagctgttcataattttctta cgcgcatggtaaacctctgaaggcgcttgaaaattatacatctgaggaaa atagtcctcccgcgcaaaattttacaacaagaatcttgttgtgcacttga aagtcaaaaactgatacggcgcccctattcataaacacaatcacgcaact ttgttgtcatccccagtccttttagacgaacgcggtaattacgatttcga gattgcatattcgtcagattgttatctttttacccatccctttagagctt cagcgtggtgtgcagaaaacaatcacaatctgatctcaggttaggcATAC TGGGATTATAAAAATCTAACATCTATTAGGGCTGCAAACTACTTTTAATT ACCGTGAAAaagccccgggggggggtactaggtttgcgaggtgacgggta tgtccgagccgaaaatcgaaaatcgaccctttgagagacaaaattttggt gattttgggaccctttgaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNac ttttgaatttgtacccctttgagagacttttgaggaatgagaaaaggtac ccttatggctcgcacatacccggcacccattttgcctaagtaaccccccc ggggaaaaagcacaggtcgaaatcatatatcgacgctgtgccgacgaatc gagattctattcagcacgcaatcaacgaagacaaaagtgaccatgacgac catccaagatcttagatgaagttcaaagttgatatttctattcccgtcgt tgaaaacacaactttttaaaaagagtcagtgatagagaatcataacataa agtctgtctattatttcgattcaattaaagtgacatttccgtaattaata gtttagtaattactgttatacatttggggatcatgtaaaagatttctttc gaaagaaactcacttcaattacacttggaggtttctggggaattcgtaaa tagtaaactgcatactgatacagtctgctagacattgataaggtaatatt tgctcttaatctttgattctttctacagtgattagattgacacatgcgcg atagaatttatattattggtcttcagaggttaatatattctttgaaaact taacctctgatactcagggtaacttTTAATATATCCAGTTGAATGAGTAT GAATATCATTACAAATAGTGGcgcaagtggctctgggtacgtGATTGGGG TGAACTTTTTTAAGTCCTACTAACTTTGAATCTTTGCAGATCTTTGTGCA aaacttaacttttttttcgatcaaactttcaaaaaccaGCTCTCTTTCcc ttagacgatcctatcgtctacacattaTCACTAAAAAAGGAATAATTCAG GAGGCGGGATGAATTTGAAAACGGAGTTTAGTTCGatgcggagatgttta cagtgtatAGTGTAATGTATGTACAattttgttccaaactctaccgccac tatcTTTtaccgtaaaccgccctgacgccctttCTCTGCGCATAtatatt ttcccgcgtttacttaccctctaaacggacgatagcgTTTATCTTTCCCT CGAAGTTTTAGGATGCAAGTATTCAGGTTTAAGATACTCTTGATACTATA AAAGTGAAACTACTAATGATTCGTGTCACATTCTTCTGGTATTTCCAAAC TTTCTTAAAAACCCAACAAAAACGACTACTTTTAAAGTGTTTTTTTGAGC GAGATTCCTTGGCggatggcacacaacgttgtttcaacgttcatctaacg ttatatggacgttgtgaacgttagataaacctTGAAACAACCCCAGCTTG GTTGTCGGTCTATGTTTACGAAGACGTAAATCGCCTACCTGTGGTTCGCT TCTCGGCTTCCTGTGGTTTTTATAATGTCGAGTTGAATTTGTGACCATcg cttttaattatttttctgtTTACTGCGCATCTGAAATTTTTACATAATCA GCGTCTTTCGGTTTTTCGAAAAGAagcaatagcgctccgcaacgcatacg tcataattattacttttctctttttttgacatttgtacgagttgcaatcc cacaattcaacaattcaatgcggctcaattaaagatacgtgcaagctgtt atatatcttttgtcaaacgatgcaattaacgtgcaaaagagattaatgca aaggttgatgggattggaactcgtacaaacacatcgagagtaatgatcat gtcaaaaataaaatatatttttagattcagcgcggtgcgctattcAAGCG ATTCTATCAAAAGGGAAAACTTAGATttaaatcaaagattttgatgaata cacgtttttatataagaacatagggaGCCTTCGGATAAGTGTTCCGGTTT CATATCAGAGCAATTTTCaactaaaaataagaaaaagcaCTTAAAAACTT TCGTGCTCTTATTTAGCTCTCTGCTCAACCATCATTGATTTCCATTTTAA GTAGATGAACACATTGATATTTCAGATCCTTATCGGAATCTTATCGGGGA ATTCCGTTAAACGGGAAATATCGGGAAACTAATTATCACGTGTGAGTGTA TTCAAATTATATTACGCCTTCCTTTGACGGATCGGtgattagattttcat ttaggtCAAATAATACCTTTGATAAACGAAATCCTGAACAGAATTGTATC GGGGAATTCCGTTAAACGGATTACTATCGGGAAACTAATTATCAGATGTA TTTCTCGGAAGCTGAATTTGACAGCTTAGCGGTGTATATTGAATTTACGA GAACTTTATAATGAAATAATGATTTGTTTAGCATTATTTTGATAGATTGT GTTTTGTTCTGCAGCAACTTTGGGTCCAGTCTCTTTTTTGATTGACCCTT GCATTGACTGGGTAGAATTATGCAATATTTTTCGCAAGTGAAAATTAGAG CCAAAGCATAAGCAAATAACACCTACATATAAAAACCGTAATAATATTCG TCCTGGGATCGAGTGGGGTTCTTTTTTTGCATCTTTTTCTGGTATTGGGT TAAATTGCTTTTAAGAATCGAATCTTAAATCTGCCAAACGACAGGTTTGC TCTCGAATAAACTCACAACAgcgtttttttttgttctttatgTTACAGTT GCTGATAAACCGCGAGGCTCGACAGACAATAACAGTCTTACTACAACACA AAAAcaactcgaaaaattatcgaCAACGCTTTCGGTTGCCGGTAAAATCA ACACGCTCAACAAAAATGAAGTATCTCCTACGGTACAAACAACAGACAAG AGACAACAAGATGAAAAAGATCGCGTCCGTTACGAGAAATGGAAGAAACG GCGTCAGTGGCAACGTAATAAGGCTTGGAAACGTGGACAACGTGAACGAC AACGTAAGGAAAGGGAGAAACGGAGAGAACGCCAGCGACACGACGATGat gacgacgacgacgacgaggatggtatatatttttatttttcattctttct CCAACCTATTGAAATAGTGATGAATCTCTTGAATTTGAAATGAAGCCAAT TATTCTTCATTTCacttaaaaattaaagaaaaattcataTTGTAATGATT AGTTCAGTATTTTTTTTACTAGATTGCATTTTGTTCTGGGAATTTTCTTA AGCTGAACACGAGGATATGCGTGCTCTTCATCttcaattctttaaaatta aatagCAATATGATTGAGACATGCGGAATAAAATTATAATACTCCGTCAC CACAGGTTGATATTCAAAGAAACTTAAATTGTGGTTTGACTATCTATCTG CTTTCTTTTACATCCATTGATTCTATGGATGTCACATTCGATCAAATATT CCAGAGAATAATTTTCTACTtgggaatatatttttttctagaataGTCAT TTTTTGTATGTTTAAGATTACAAGATTACTTCTCCTATTAATTTTAAATA CCGTCTACCTTATCTTAGATCACAACAAACCAAACGTTATCTACATCACC TCTACAATAGCTGCCATCTTTATTGTTTGTTTCGTTGCCTTGGTGACCTG GCATTTAAAAGAGACTGATCGATTATGTTTCAAACAAAACGAAAATCAAC GCCGAAACACGAACAGCAGTCAAAGAGCATTCGCTAGGAGATCCAAAATG AATTCTTCGATTGCTAAACCATTTCCTAAACCTTATCCAGGAGAAAAGTT TACTAATGGTGTTTTATCCAAGAATTTCATTAATTCTGTAGTGATTGAAA ACATTTCTGTCTCTTACAGCTCACCGTCAAATAAAGAAgctcaaaatgaa acaaaacttgAGGAGTTTCAGAAGCAAGATTCTATGCTATCTACTGAAAA ATCTACATCTGATGTATTGGAAAAAACGGTTTCTGACACTTTAAGTGAGA CGCTGACATCTTTGCAAATTCCTGCCAACAAAAGTAACAGCCCAAGCCAA CATTCTTTATCACACCCAGGGTCGTCATATTTACGTCATAGTGACTTCAT CATCGGTGACGTAatgaatgacgtcattgttgatATAAAGCAATTGTATC AACAATGTGAACATTCTAAAGATGAAATTTGTTCAACGAATAAAGGCGCT ATTGAAAGTTCAGACAATGCCGTAAATGAGAATTCTGACCTCGTAAACAA AAATTCCATTAAAAGTAGCGTAACAAGAGACTCAGAACTCTCAATCAAAG ACTTCATTACCGAGAATAAATGTAATGACGATCTTGAAGAACATATTAAT AATGGAgacttaaaaattgaaattgaagtcGCTTCAAATGTTGATGAGAA ACAAACAGCGGTTGTAATTACGGCTTAAAACTCGGCtgagagattttttt tgagaCATCTCGTTTTGAAGTACTCTTAGGTCCCTAATAAACGAAGGGGG GAGGTTGGAACAAGCGAAGTGAGGGTTGGAAAAACTTCGAATTTGAAGAA ACGTCAGggtttggaa

Coding sequence (CDS) from alignment at sc0000090:77975..87990+

>TCONS_00009083 ID=TCONS_00009083|Name=TCONS_00009083|organism=Clytia hemisphaerica|type=CDS|length=1257bp|location=Sequence derived from alignment at sc0000090:77975..87990+ (Clytia hemisphaerica)
ATAAAGAAGATGGCATTGAAATTCATATTTATCGTATTTTGTTTAGTAAT
ATGTTATGCATGTTCACAAAAAGTTGCTGATAAACCGCGAGGCTCGACAG
ACAATAACAGTCTTACTACAACACAAAAAcaactcgaaaaattatcgaCA
ACGCTTTCGGTTGCCGGTAAAATCAACACGCTCAACAAAAATGAAGTATC
TCCTACGGTACAAACAACAGACAAGAGACAACAAGATGAAAAAGATCGCG
TCCGTTACGAGAAATGGAAGAAACGGCGTCAGTGGCAACGTAATAAGGCT
TGGAAACGTGGACAACGTGAACGACAACGTAAGGAAAGGGAGAAACGGAG
AGAACGCCAGCGACACGACGATGatgacgacgacgacgacgaggatgATC
ACAACAAACCAAACGTTATCTACATCACCTCTACAATAGCTGCCATCTTT
ATTGTTTGTTTCGTTGCCTTGGTGACCTGGCATTTAAAAGAGACTGATCG
ATTATGTTTCAAACAAAACGAAAATCAACGCCGAAACACGAACAGCAGTC
AAAGAGCATTCGCTAGGAGATCCAAAATGAATTCTTCGATTGCTAAACCA
TTTCCTAAACCTTATCCAGGAGAAAAGTTTACTAATGGTGTTTTATCCAA
GAATTTCATTAATTCTGTAGTGATTGAAAACATTTCTGTCTCTTACAGCT
CACCGTCAAATAAAGAAgctcaaaatgaaacaaaacttgAGGAGTTTCAG
AAGCAAGATTCTATGCTATCTACTGAAAAATCTACATCTGATGTATTGGA
AAAAACGGTTTCTGACACTTTAAGTGAGACGCTGACATCTTTGCAAATTC
CTGCCAACAAAAGTAACAGCCCAAGCCAACATTCTTTATCACACCCAGGG
TCGTCATATTTACGTCATAGTGACTTCATCATCGGTGACGTAatgaatga
cgtcattgttgatATAAAGCAATTGTATCAACAATGTGAACATTCTAAAG
ATGAAATTTGTTCAACGAATAAAGGCGCTATTGAAAGTTCAGACAATGCC
GTAAATGAGAATTCTGACCTCGTAAACAAAAATTCCATTAAAAGTAGCGT
AACAAGAGACTCAGAACTCTCAATCAAAGACTTCATTACCGAGAATAAAT
GTAATGACGATCTTGAAGAACATATTAATAATGGAgacttaaaaattgaa
attgaagtcGCTTCAAATGTTGATGAGAAACAAACAGCGGTTGTAATTAC
GGCTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005092XLOC_005092Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009083-proteinTCONS_00009083-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009083-exon-sc0000090-1491911889:77975..78047TCONS_00009083-exon-sc0000090-1491911889:77975..78047Clytia hemisphaericaexon
TCONS_00009083-exon-sc0000090-1510915933:77975..78047TCONS_00009083-exon-sc0000090-1510915933:77975..78047Clytia hemisphaericaexon
TCONS_00009083-exon-sc0000090-1575043694:77975..78047TCONS_00009083-exon-sc0000090-1575043694:77975..78047Clytia hemisphaericaexon
TCONS_00009083-exon-sc0000090-1491911889:86173..86496TCONS_00009083-exon-sc0000090-1491911889:86173..86496Clytia hemisphaericaexon
TCONS_00009083-exon-sc0000090-1510915933:86173..86496TCONS_00009083-exon-sc0000090-1510915933:86173..86496Clytia hemisphaericaexon
TCONS_00009083-exon-sc0000090-1575043694:86173..86496TCONS_00009083-exon-sc0000090-1575043694:86173..86496Clytia hemisphaericaexon
TCONS_00009083-exon-sc0000090-1491911889:86993..87990TCONS_00009083-exon-sc0000090-1491911889:86993..87990Clytia hemisphaericaexon
TCONS_00009083-exon-sc0000090-1510915933:86993..87990TCONS_00009083-exon-sc0000090-1510915933:86993..87990Clytia hemisphaericaexon
TCONS_00009083-exon-sc0000090-1575043694:86993..87990TCONS_00009083-exon-sc0000090-1575043694:86993..87990Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000090supercontigsc0000090:77975..87990 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.931174 1.31268 0.711268 0.430773 1.45225 0.828816 0.119717 0.648085 2.99972 4.12155 1.27288 1.9845 7.12231 6.81808 21.3684 29.8038 1.88632 2.09453 0.127196 0.207163 0.086767 0 0.514478 0.485332 1.0218 1.40452 0.246106 0 0.33202 0.315901
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009083 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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