TCONS_00009131 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009131
Unique NameTCONS_00009131
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2043

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009131 ID=TCONS_00009131|Name=TCONS_00009131|organism=Clytia hemisphaerica|type=transcript|length=2043bp
AACAAGCActtaatcgcaacttgattcgaactctatcaaaagttacagcc
atttttgtctccagctgcaaattatttcgagacagactttaatttccTAG
TTACGTTTTACATTATATAGCCAGAGTCTAGTGGACTGAACTCATTGAAC
CATCTTTTGGCATGGTTTACAACGCTCTCATTTTACTTTGTCTGATTGAA
GCCATGTCAAATTAACTTTGCTCATTTTTCAATCCTTCACGCATTTATCC
TTGATggttttagtttttgattttacaaattttcgaAGAATCTCTTTCCC
TACATTTATTAGCTTATGGTTTTGTTTCTCGATTTCagtgacaaaaaaaa
caacacaaaaaattaaatgacaAATATTATAATCTACTCTATCGTTGTTG
GGTTATTGTCTTTCCTGCTGTACGAAGGTTTAGTGTATTATCAAAGTATG
GCTGAAGGCGGAAGCGAACAGTGCCCACCGCCATCAACAGAAGAGACAAC
GCCCTTAACAAACGCTCAAGATATGACGCAACTCAAAGCTGTAATGATTG
GTGCAACAGGAGCAACGGGGAAATATTTATTCGCTGGATTGATTAAAGAT
CAGagaTTTACGAAGATCACAACGATTGGGCGGAGGGCGGCTTTCATTCC
AGAAGATGTGGAGGGCGCCAGCGATATCAATTTGGAAGAGGAGGTGAAAA
GTGGGCGGCTTGTACAAATCACTAAAGAACAAATCGATTTGAACAAAGAG
ATTAACAAAGAGACAGTGGGCAAATATCTGGAAGGACACGATGTCTATTT
TAGTGCTTTCGGAACTACGCGTAAAATAGCTGGATCAGCGGAGGAGTTCC
GGCGTATTGATTACGGGATCAACGTAGATATGATGACGGTTGCAAAAGAA
GTCGGAGTTCCGCATTGTTCATTCATGTCAAGTCAAGGATCAAACAGCAA
TAGTTATTTTCTTTACATGCAGGTTAAAGGGCAGATTGAGGACAAAGCCA
AGGAGTTGGATTTCGATAAAACGTCCATCTGGAGACCTGGAGTGATGGAT
CGGGGATCTACAACGCCACGATTTACCGAAAAATTAGCCAaatttgttcT
GCATACGATCCCTGTACAACATGTTGCCAGTGCTATGCTGGTAGAAGCTG
TTGAACGTTTCCAGAATAAGGGTGAACAACAGGGGACAAAATGCGTTCCT
ATTTATCTTAACCGAGATATTTATCGATATGATGGTTTAGGTTCCAAAGG
GCAACCGTTGGAAAAATGAATTTATGGAATTTTGTATTATGTACGGGATT
TTGCATTAACCTTATATTATATACCATATTATTTATAATGAAACATCCTG
TcccttttttgaaaaccatATACAAGCCCAGCGGAACAACcgttaaagtg
gggaggctgaaggctcaaaatgagataaaattcactagcaatttgaggaa
aaaaaatctaatttgttcaaaagtggGGAAGGCTGAATGCTCTCCAGTCT
TCCCGCTTCCGTCGGGCCTGATACAGCTCCTTGATAATGCAAATGActaa
aatatattgtatttaTAACTTACATGTAAAATTAATTATACATATTCTTT
TGTCACACTTTCGCTAATGCCTGTCTCTAttcattcattttaaaaattgt
ttaaacTTATAAATATTTCTAAATACAGAATTCAACAACGATAAAGAATA
TTAACATTTCCATCCACTAGACATCCATTGAACATCCAAATCTTTattca
gaaaataaaaacagtttcACTACTTCTTTCATAATATCCCTGGCTTTCTG
AAGTGCAGCATGGAACAGATCTCTGAAATTGATTgttttagaggagtgcg
attaatcgttaattgcactattaccactttttgcactcttcggcgggggg
acacttttgtcctcTCCCAAGTTCTGTGTCAgatacttttttttactaat
acaataatgaccggttagtgagggctgtactgagaaatattgcccgaggt
caagtaacgaccgagcttgcgaggttgttgcgttgaccgaggg
Run BLAST on NCBI

protein sequence of TCONS_00009131-protein

>TCONS_00009131-protein ID=TCONS_00009131-protein|Name=TCONS_00009131-protein|organism=Clytia hemisphaerica|type=polypeptide|length=300bp
MTNIIIYSIVVGLLSFLLYEGLVYYQSMAEGGSEQCPPPSTEETTPLTNA
QDMTQLKAVMIGATGATGKYLFAGLIKDQRFTKITTIGRRAAFIPEDVEG
ASDINLEEEVKSGRLVQITKEQIDLNKEINKETVGKYLEGHDVYFSAFGT
TRKIAGSAEEFRRIDYGINVDMMTVAKEVGVPHCSFMSSQGSNSNSYFLY
MQVKGQIEDKAKELDFDKTSIWRPGVMDRGSTTPRFTEKLAKFVLHTIPV
QHVASAMLVEAVERFQNKGEQQGTKCVPIYLNRDIYRYDGLGSKGQPLEK
Run BLAST on NCBI

transcript from alignment at sc0000090:155890..162133-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009131 ID=TCONS_00009131|Name=TCONS_00009131|organism=Clytia hemisphaerica|type=transcript|length=6244bp|location=Sequence derived from alignment at sc0000090:155890..162133- (Clytia hemisphaerica)
AACAAGCACTTAATCGCAACTTGATTCGAACTCTATCAAAAGTTACAGCC
ATTTTTGTCTCCAGCTGCAAATTATTTCGAGACAGACTTTAATTTCCTAG
TTACGTTTTACATTATATAGCCAGAGTCTAGTGGACTGAACTCATTGAAC
CATCTTTTGGCATGGTTTACAACGCTCTCATTTTACTTTGTCTGATTGAA
GCCATGTCAAATTAACTTTGCTCATTTTTCAATCCTTCACGCATTTATCC
TTGATGGTTTTAGTTTTTGATTTTACAAATTTTCGAAGAATCTCTTTCCC
TACATTTATTAGCTTATGGTTTTGTTTCTCGATTTCAGTGACAAAAAAAA
CAACACAAAAAATTAAATGACAAATATTATAATCTACTCTATCGTTGTTG
GGTTATTGTCTTTCCTGCTGTACGAAGGTTTAGTGTATTATCAAAGTATG
GCTGAAGGCGGAAGCGAACAGTGCCCACCGCCATCAACAGAAGAGACAAC
GCCCTTAACAAACGCTCAAGATATGACGCAACTCAAAGCTGTAATGATTG
GTGCAACAGGAGCAACGGGGAAATATTTATTCGCTGGATTGATTAAAGAT
CAGGTACTGGAGTAATTCATTCTTCTGGAATCGAGATACAATATTCCCTG
GCCTCGTTCTGAAATCAAATATTAACTTCCAAAGGCTTTAAAACGTTCGT
TATTGTATGTATTCTTAAAAGACCGTTATCGATTTAGATGTCTGAAAATG
TTGCAGTATCTTGGCAAAATACTTTAATGGGATAAACTTTCGCGGGAATT
GAATTGCGCGGATTTCGTGGATTTGGGTGTCATCCGCGAAAATCCGCGAA
ATTAAGTCCCAATGGGAATTTGGAAGGGCCTCGTCCAAAATATGTCAAAT
AAATACTAATTGAATGGTTACTTGCACAAAGAGGCGCAAGTAATGTGTAT
TTCAACAACCAACATGCATGATTTGATAGTAAAAGTCACAAAATCGTGAA
AATATTGCCACCCAATAGTGCCACCCGCGAAATTAAGTCCCCGGGATAGG
CCCAAGCGCAAAATTTAATCCCCGCGAAAGTTTATCCCATAAAAGTAATT
TGTAAACGAGGTCAACAATGATTTTATGTATTCTCAGTAGTGTACATAAA
TTCTAGTTTGCCATTTTGATAATAAATTTACTTTCGTTTAGATTATTAAC
ATTGTTAATATAAAAACAAAAAACTATGTTTTCTTTTTCAGAGATTTACG
AAGATCACAACGATTGGGCGGAGGGCGGCTTTCATTCCAGAAGATGTGGA
GGGCGCCAGCGATATCAATTTGGAAGAGGAGGTGAAAAGTGGGCGGCTTG
TACAAATCACTAAAGAACAAATCGGTAAGGATTCTTCATAATTGTTACGA
ATAAGGGCCCCAGATCTGTAAAGCCCAAAGGGCTAGATCTGCGGCCTTTA
TCGAAAAGTGAAGCGAGTTTTGGTAGGATTTTCTACCAAAGAAATCACGT
GACAATAAGCAATTTCACTGGTTTGAGAGATTTGCCGCCTACTTTTTTTG
ACCTCGCGCTCCGAAAACAATTAAAATGCTAGATCCTATCCATCGGCACA
AAATTTAAGAAGTCAAATTTTTGCTTCACTTTTTTTTACTGAAGAAAGCT
TAAAGTTGCCTATCTAAACCTTCGGGCTTTACAGATCTGTGGTAAGGGCT
AGTGAGGGGGAGAAGTAGAATATCTGTCGTTTTTATCCTGTATCATTGAA
ATAAAAGGCCCTGCAGTAATGGAACCAGACTTAGTCGCTTTAAAACAAGA
TTAAGTCCTGATAGTTTTGGGTTAAAAACCAGGTTAGACATACGCCACAT
ACTTATAGAGCAGAGCGCGGTGTGAGATGACAACTATATCTCCTTCTTTT
CAGATTTGAACAAAGAGATTAACAAAGAGACAGTGGGCAAATATCTGGAA
GGACACGATGTCTATTTTAGTGCTTTCGGAACTACGCGTAAAATAGCTGG
ATCAGCGGTAAGTTTTGCGAGTGTATTGGTCTATTTTATTGCCGTATATC
CTTTTTTGGTCAAATACATAATTAATAACAGTTTTAATCGCACGATGGGT
TATTTTTTCTTATTTGGCACGCCCTCAAAGAGAGCAATTAATCGTTAATT
GCATCCTGTAGAGAGCAATTAATCGTTAATCANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTCGAAAATTGCACTCGTGATTTTTTTTGTTTCTAATTTT
CCTCGTCCTTTCGGACTCGGAAAATTAATAACAAAAAAATCACTCGTGCA
ATTATATTATTCGAATTGCACTCGTTATCATATACTAATCGAGTTAAAGG
ATTATTTACTCTATTGAGACGTTTCCTTAAAATAGTTTATGCTCACGTAG
TTCTTTCTCTTTTTGACTTGAACACCATGACTTTTAGAAAAGTGTTTTTG
CTGGACTGAATTTTCGTTTTACCTGGTTATTCCTTTTAAAAATAAGCTTA
GAAGGTTAAGAATTACTTCTAGGATTCTACGAGTTTCTGCTAATCAGAGA
ATTCCGGTGTCTTTAGGAGGAGTTCCGGCGTATTGATTACGGGATCAACG
TAGATATGATGACGGTTGCAAAAGAAGTCGGAGTTCCGCATTGTTCATTC
ATGTCAAGTCAAGGATCAAACAGCAATAGTTATTTTCTTTACATGCAGGT
TAAAGGGCAGGTACGTTCAGTCATGAGGGTATATTGTTAGGTTTTTGAGA
CATGCCCTATCTCACCCAAGCGTGTACATTAGATTTGAAAAAATGCTTTA
TCGATAACAATAAAAGACAAATCGGGGCAAACCCATGTAAAGATAACCTG
ATCATATATGTGTACTAAAAGGATTTTCGAGAATTTCTTGCATACCACCA
CCCCATTTTAGAGAAGTGGTATTTTAGTACCCATCTGGGACATTTTGACA
CGGAGACAACCCAATTTTGGTATTTTCAGGACAGATATGTCTTCTCAGGA
CCATTTTTCTCAAGCGTGCTGATTTTTGCAACAGAATAAACATTTTTCTC
AAAAATTAATACTTTTAAACAATGAATTGAGTAAACATTAAAGACATTTG
ACTGCATGCAAAAATAATTGAACTTGGAAAGTTTTCTTTAAATGAGAAAA
TTTTACAATTTTTTTTGAAAAATTGCAAAAATTCTGAATAAATCCCGAAC
AATTCTGAAAAAAAATTCATAAAATTATAAATATTACTAATTTTAGTACC
AATTTACTAAAAAGATTCTCTAATTTTAGTCTGGATATCTTTTTGGTACT
GGCCATGGGTACTAACCATGGTACTAACCATGATACTAAAAGGATTTTTA
ATTTTTTTAGGTATAACCACCACGTCACTAAACAACATGATGTCCTAGAT
TTTAGTATCGAACCCGCCCCCCCCCTTGTTACATTATATGTGAAAAATGT
TTTAATTAGTCTACAAAAATCATAAATGCAATAAGATTGTAACTAATAAG
TTTTAATGATGTCTGTTTTTTCGTTTCTTTAGATTGAGGACAAAGCCAAG
GAGTTGGATTTCGATAAAACGTCCATCTGGAGACCTGGAGTGATGGATCG
GGGATCTACAACGCCACGATTTACCGAAAAATTAGCCAGTAAGCTTTTCC
TTTGAATTATTTTCAAAATCTTATTTGAACGATTGAGGATGAGAAGATTG
GTAGTTTGTTTTTCGTCTTAAAAACATTAGCAAATGTACCATAAGGGAAG
AAATTTTGGCGAGAAGAAATTTTTAATGCAATTTGGCGGAATTTATTTTG
GCGATTTAATAGAATTTCTAAGTTTGGCGAGAATTAATTTTGGTAAACGA
CCCACTTTTGTTCAATATTTTAGCTGAGAAAAGAGGAAAAAGGGTATTTA
CTCTCGGGTACCTAATAGCCGGGGGGTTTGGAATAAGCAGGGGGGTTGGA
AAAATTCTCAAAAATTAATAAGCGGGGGGGTTGGAATAAAANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAA
AAATTTCCCAAAAATCAATAAGCGGGGGGGTTGGAATAAGAATGTCCTGG
GTGGAAAATTTTCGAAAAATTAATTAGCGGGCCCCCCCGGCTATTAAGTA
CCCGAGAGTAGGAGAAATAGAGACTAAATTGAAAGAAAATTAAATATAGC
GAGAATTTATTACCTGTAAATTTAAATTCGGCAGAATGAAATGTCGGCGA
ATTTGGCAAAATCTTTAGGCAATTCGCCAAAATTTCTTTCAGCCAAAATT
TTCCCCCTATGTATGTTGTGTTTTCTGCAGTTTAGACCATGATTGACTAA
GAACGACGGTGAATCAGCGGTTTTGCGGTTCAGTTGTTGGTTGTACTCCA
TCTTTGGAAGGGTGGATACATAAATTAGCTAATGTCAGAGTTTCTTTGTT
ATAGACCTCTTTCATAAATTACCGCATAAGTAACTCGTTCCTCGTAGATA
GGTTTCTGCAGTGTGAAAAAAAACTTAACGCTTGTACCCAACCCGCTGCC
CACTCGGACCTGAAATCCGTCAACTCCAAGATGACTTACCCGTTTTATAT
TTTGGGCACGCCTTTTGATAAACCGCCATATTTTTTTTTAGAATTTGTTC
TGCATACGATCCCTGTACAACATGTTGCCAGTGCTATGCTGGTAGAAGCT
GTTGAACGTTTCCAGAATAAGGGTGAACAACAGGGGACAAAATGCGTTCC
TATTTATCTTAACCGAGATATTTATCGATATGATGGTTTAGGTTCCAAAG
GGCAACCGTTGGAAAAATGAATTTATGGAATTTTGTATTATGTACGGGAT
TTTGCATTAACCTTATATTATATACCATATTATTTATAATGAAACATCCT
GTCCCTTTTTTGAAAACCATATACAAGCCCAGCGGAACAACCGTTAAAGT
GGGGAGGCTGAAGGCTCAAAATGAGATAAAATTCACTAGCAATTTGAGGA
AAAAAAATCTAATTTGTTCAAAAGTGGGGAAGGCTGAATGCTCTCCAGTC
TTCCCGCTTCCGTCGGGCCTGATACAGCTCCTTGATAATGCAAATGACTA
AAATATATTGTATTTATAACTTACATGTAAAATTAATTATACATATTCTT
TTGTCACACTTTCGCTAATGCCTGTCTCTATTCATTCATTTTAAAAATTG
TTTAAACTTATAAATATTTCTAAATACAGAATTCAACAACGATAAAGAAT
ATTAACATTTCCATCCACTAGACATCCATTGAACATCCAAATCTTTATTC
AGAAAATAAAAACAGTTTCACTACTTCTTTCATAATATCCCTGGCTTTCT
GAAGTGCAGCATGGAACAGATCTCTGAAATTGATTGTTTTAGAGGAGTGC
GATTAATCGTTAATTGCACTATTACCACTTTTTGCACTCTTCGGCGGGGG
GACACTTTTGTCCTCTCCCAAGTTCTGTGTCAGATACTTTTTTTTACTAA
TACAATAATGACCGGTTAGTGAGGGCTGTACTGAGAAATATTGCCCGAGG
TCAAGTAACGACCGAGCTTGCGAGGTTGTTGCGTTGACCGAGGG

Coding sequence (CDS) from alignment at sc0000090:155890..162133-

>TCONS_00009131 ID=TCONS_00009131|Name=TCONS_00009131|organism=Clytia hemisphaerica|type=CDS|length=903bp|location=Sequence derived from alignment at sc0000090:155890..162133- (Clytia hemisphaerica)
ATGACAAATATTATAATCTACTCTATCGTTGTTGGGTTATTGTCTTTCCT
GCTGTACGAAGGTTTAGTGTATTATCAAAGTATGGCTGAAGGCGGAAGCG
AACAGTGCCCACCGCCATCAACAGAAGAGACAACGCCCTTAACAAACGCT
CAAGATATGACGCAACTCAAAGCTGTAATGATTGGTGCAACAGGAGCAAC
GGGGAAATATTTATTCGCTGGATTGATTAAAGATCAGAGATTTACGAAGA
TCACAACGATTGGGCGGAGGGCGGCTTTCATTCCAGAAGATGTGGAGGGC
GCCAGCGATATCAATTTGGAAGAGGAGGTGAAAAGTGGGCGGCTTGTACA
AATCACTAAAGAACAAATCGATTTGAACAAAGAGATTAACAAAGAGACAG
TGGGCAAATATCTGGAAGGACACGATGTCTATTTTAGTGCTTTCGGAACT
ACGCGTAAAATAGCTGGATCAGCGGAGGAGTTCCGGCGTATTGATTACGG
GATCAACGTAGATATGATGACGGTTGCAAAAGAAGTCGGAGTTCCGCATT
GTTCATTCATGTCAAGTCAAGGATCAAACAGCAATAGTTATTTTCTTTAC
ATGCAGGTTAAAGGGCAGATTGAGGACAAAGCCAAGGAGTTGGATTTCGA
TAAAACGTCCATCTGGAGACCTGGAGTGATGGATCGGGGATCTACAACGC
CACGATTTACCGAAAAATTAGCCAAATTTGTTCTGCATACGATCCCTGTA
CAACATGTTGCCAGTGCTATGCTGGTAGAAGCTGTTGAACGTTTCCAGAA
TAAGGGTGAACAACAGGGGACAAAATGCGTTCCTATTTATCTTAACCGAG
ATATTTATCGATATGATGGTTTAGGTTCCAAAGGGCAACCGTTGGAAAAA
TGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005116XLOC_005116Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009131-proteinTCONS_00009131-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009131-exon-sc0000090-1575043694:161531..162133TCONS_00009131-exon-sc0000090-1575043694:161531..162133Clytia hemisphaericaexon
TCONS_00009131-exon-sc0000090-1575043694:160760..160892TCONS_00009131-exon-sc0000090-1575043694:160760..160892Clytia hemisphaericaexon
TCONS_00009131-exon-sc0000090-1575043694:160127..160230TCONS_00009131-exon-sc0000090-1575043694:160127..160230Clytia hemisphaericaexon
TCONS_00009131-exon-sc0000090-1575043694:159224..159367TCONS_00009131-exon-sc0000090-1575043694:159224..159367Clytia hemisphaericaexon
TCONS_00009131-exon-sc0000090-1575043694:158296..158401TCONS_00009131-exon-sc0000090-1575043694:158296..158401Clytia hemisphaericaexon
TCONS_00009131-exon-sc0000090-1575043694:155890..156842TCONS_00009131-exon-sc0000090-1575043694:155890..156842Clytia hemisphaericaexon
TCONS_00009131-exon-sc0000090-1510915933:161531..162133TCONS_00009131-exon-sc0000090-1510915933:161531..162133Clytia hemisphaericaexon
TCONS_00009131-exon-sc0000090-1510915933:160760..160892TCONS_00009131-exon-sc0000090-1510915933:160760..160892Clytia hemisphaericaexon
TCONS_00009131-exon-sc0000090-1510915933:160127..160230TCONS_00009131-exon-sc0000090-1510915933:160127..160230Clytia hemisphaericaexon
TCONS_00009131-exon-sc0000090-1510915933:159224..159367TCONS_00009131-exon-sc0000090-1510915933:159224..159367Clytia hemisphaericaexon
TCONS_00009131-exon-sc0000090-1510915933:158296..158401TCONS_00009131-exon-sc0000090-1510915933:158296..158401Clytia hemisphaericaexon
TCONS_00009131-exon-sc0000090-1510915933:155890..156842TCONS_00009131-exon-sc0000090-1510915933:155890..156842Clytia hemisphaericaexon
TCONS_00009131-exon-sc0000090-1491911889:161531..162133TCONS_00009131-exon-sc0000090-1491911889:161531..162133Clytia hemisphaericaexon
TCONS_00009131-exon-sc0000090-1491911889:160760..160892TCONS_00009131-exon-sc0000090-1491911889:160760..160892Clytia hemisphaericaexon
TCONS_00009131-exon-sc0000090-1491911889:160127..160230TCONS_00009131-exon-sc0000090-1491911889:160127..160230Clytia hemisphaericaexon
TCONS_00009131-exon-sc0000090-1491911889:159224..159367TCONS_00009131-exon-sc0000090-1491911889:159224..159367Clytia hemisphaericaexon
TCONS_00009131-exon-sc0000090-1491911889:158296..158401TCONS_00009131-exon-sc0000090-1491911889:158296..158401Clytia hemisphaericaexon
TCONS_00009131-exon-sc0000090-1491911889:155890..156842TCONS_00009131-exon-sc0000090-1491911889:155890..156842Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000090supercontigsc0000090:155890..162133 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
79.007	76.3031	48.9145	40.7352	31.4687	25.9129	40.8831	40.9065	37.7516	37.6094	32.0224	29.6274	29.5286	31.4091	40.5668	41.4148	29.3062	31.916	39.4078	43.835	17.6755	18.6369	33.3633	29.5458	22.9145	19.3359	12.9863	8.87162	19.1653	20.5035
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
Blast
[Close]
BLAST of TCONS_00009131 vs. Swiss-Prot (Human)
Match: HTAI2 (Oxidoreductase HTATIP2 OS=Homo sapiens GN=HTATIP2 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 3.751e-21
Identity = 77/219 (35.16%), Postives = 113/219 (51.60%), Query Frame = 1 
Query:  529 QLKAVMI-GATGATGKYLFAGLIKDQRFTKITTIGRRAAFIPEDVEGASDINLEEEVKSGRLVQITKEQIDLNKEINKETVGKYLEGHDVYFSAFGTTRKIAGSAEEFRRIDYGINVDMMTVAKEVGVPHCXXXXXXXXXXXXYFLYMQVKGQIEDKAKELDFDKTSIWRPGVM--DRGSTTP------RFTEKLAKFVL--HTIPVQHVASAMLVEAV 1152
            Q K+V I GA+G TG+ L   +++   F+K+T IGRR             +  +EE        + +E +D  K    +      +GHDV F   GTTR  AG AE F R+D    +    +AK  G  H + +SS+G++ +S FLY+QVKG++E K +EL FD+ S++RPGV+  DR  + P      +F   L       H++PV  V  AML   V
Sbjct:   17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRK------------LTFDEEAYK----NVNQEVVDFEK---LDDYASAFQGHDVGFCCLGTTRGKAG-AEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVV 215
The following BLAST results are available for this feature:
BLAST of TCONS_00009131 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HTAI23.751e-2135.16Oxidoreductase HTATIP2 OS=Homo sapiens GN=HTATIP2 ... [more]
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