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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009183 ID=TCONS_00009183|Name=TCONS_00009183|organism=Clytia hemisphaerica|type=transcript|length=740bp
TTGAAATTTAGCACATCATCTGGTTCAATCTCAATCCAATCAGCCAAAAC
ATTCAATTGGTGATACAAATCTTTTGAAACATTCAACCAAAACAACAAAG
CCTCCAAATTACGCACAAACCGTATATCTTTATATTTTGGATGAGCTTCC
ATCAAGGCTTTTGTATTTGGATACAGTGATTCAACACCTTCAACTTTTTG
AAGGAGTGCAGCTATCTCGTGAATGGCagcaatcttttcttttctttgcc
CAAGAAGATTGAAACCTTGTGAGGTATCAGCTACTGAATTGCCAGTATCA
TTGGTGGATTCATTTTTGGAAACAACTTGTTCTGTTGGCTTTTCTTCCTG
GTCAATTAGTGCATTATCTAGTCTTTCTTGTAAAGATTGCATTTCATTAG
ACTCTTCCTTTGGAATGTCAACTGTTTCATTTCTTGGAGATGAGGTTAAA
TGATCTGCATCAAATGACGTTTTGAAAGAAAGGAATTCCCCATCATCACT
ATCCTCATTGGCTAAAGAAAAAGTACTTTCTTTTGCATGGCTGAAGCCAG
GGTCATCTAGAGCGCAAATATCAGGACAACTACCTTTCTTAGCATCAAAA
CGAaaattgatgatgtcatcaagTATTTTGTCAACTCCTTTACGTGCTTC
TTCCAGATAATTGTCTTGCTCTTCAAGTGTCCTTGCTGAATGGTATGCTT
GTAACTGGAGCCAgagaaattcatgatattcaacCTGAAA Run BLAST on NCBI transcript from alignment at sc0000091:97280..99266+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009183 ID=TCONS_00009183|Name=TCONS_00009183|organism=Clytia hemisphaerica|type=transcript|length=1987bp|location=Sequence derived from alignment at sc0000091:97280..99266+ (Clytia hemisphaerica)
TTGAAATTTAGCACATCATCTGGTTCAATCTCAATCCAATCAGCCAAAAC
ATTCAATTGGTGATACAAATCTTTTGAAACATTCAACCAAAACAACAAAG
CCTCCAAATTACGCACAAACCGTATATCTTTATATTTTGGATGAGCTTCC
ATCAAGGCTTTTGTATTTGGATACAGTGATTCAACACCTTCAACTTTTTG
AAGGAGTGCAGCTATCTCGTGAATGGCagcaatcttttcttttctttgcc
CAAGAAGATTGAAACCTTGTGAGGTATCAGCTACTGAATTGCCAGTATCA
TTGGTGGATTCATTTTTGGAAACAACTTGTTCTGTTGGCTTTTCTTCCTG
GTCAATTAGTGCATTATCTAGTCTTTCTTGTAAAGATTGCATTTCATTAG
ACTCTTCCTTTGGAATGTCAACTGTTTCATTTCTTGGAGATGAGGTTAAA
TGATCTGCATCAAATNTCAAAGGGAATCAGGACCATGAAACTGAATATAT
CAACAAAGGTTGGTAAATTCATATCTTGGAAACATTTGCCATATTGAGCA
TATTTATTAAACTGCTTTGCTTCTTTTTCAATGTCATTGATAAAGTTTGC
CATCTTTGTGTCATTTAGTTTGAGGAAGACACCCAACATTTTGTTCAGTT
GGTTGccaaattgaatttcaaaagctctggagaattttgttgaatttNTT
TTGTTCAGTTGGTTGccaaattgaatttcaaaaactctggagaattttgt
tgaatttacaGTTGGATCATCAATACAGAATTTGGCTTTCTTAAGAGGAA
TGTAGAGGATTTCTCGAACTCTCTTCATGATGAAAAGAAGACCATTTTCT
CTAATATTTCGCTCAACAAACTCTCTGTATCGTGAGGTTGATGTTTTTTC
GATGACTGAGAAACGTTGCTGTGAGATACGTTTGCGTTTTTCTCTTTTGC
TTCTCCGTAATGCAACATTACTGAGAAGCGAGGGCAGATTGACTGAACTT
TCCAGCATGTCAGCTGTGGCAATCTTGTGAGCtgttttgtatgatttttt
agTCTTCAAACATTGTAAATCTAAaggtaaaaacaaaaacagatgaTCAA
TGAAAACTTATGGATGAAGATACAAAAAAGTATTTCCAATAGTCAAGATT
TCCATTTTTAATCCAAATCATCACATTTAAAAGAAAACAGCTCAATAGCA
ATTTATAATCAACCAATTACAAACCTAGTCCACAATCAAACCAGTCCTTG
AAATTTAGCACGTCATCTGGTTCAATCTCAATCCAATCAGCCAAAACATT
CAATTGGTGATACAAATCTTTTGAAACATTCAACCAAAACAACAAAGACT
CCATGTTACGCACAAACCGTATATCTTTATATTTTGGATGAGCTTCCATC
AAGGCTTTTGTATTTGGATACAGTGATTCAACACCTTCAACTTTTTGAAG
GAGTGCAGCTATCTCGTGAATGGCAGCAATCTTTTCTTTTCTTTGTCCAA
GAAGATTGAAACCTTGTGAGGTATCAGCTACTGAATTGCCAGTATCACTG
GTGGATTCATTTTTGGAAACAACTTGTTCTGTCGGCTTTTCTTCCTGGTC
AATTAGTGCATTATCTAATCTTTCTTGTAAAGATTGCATTTCATTAGATT
CTTCCTTAGGAATGTCAACTGTTTCATTTCTTGGAGATGAGGTTAAATGA
TCTGCATCAAACGACGTTTTGAAAGAAAGGAATTCCCCATCATCACTATC
CTCATTGGCTAAAGAAAAAGTACTTTCTTTTGCATGGCTGAAGCCAGGGT
CATCTAGAGCGCAAATATCAGGACAACTACCTTTCTTAGCATCAAAACGA
aaattgatgatgtcatcaagTATTTTGTCAACTCCTTTACGTGCTTCTTC
CAGATAATTGTCTTGCTCTTCAAGTGTCCTTGCTGAATGGTATGCTTGTA
ACTGGAGCCAgagaaattcatgatattcaacCTGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009183-exon-sc0000091-1491911889:97280..97744 | TCONS_00009183-exon-sc0000091-1491911889:97280..97744 | Clytia hemisphaerica | exon |
| TCONS_00009183-exon-sc0000091-1510915933:97280..97744 | TCONS_00009183-exon-sc0000091-1510915933:97280..97744 | Clytia hemisphaerica | exon |
| TCONS_00009183-exon-sc0000091-1575043694:97280..97744 | TCONS_00009183-exon-sc0000091-1575043694:97280..97744 | Clytia hemisphaerica | exon |
| TCONS_00009183-exon-sc0000091-1491911889:98992..99266 | TCONS_00009183-exon-sc0000091-1491911889:98992..99266 | Clytia hemisphaerica | exon |
| TCONS_00009183-exon-sc0000091-1510915933:98992..99266 | TCONS_00009183-exon-sc0000091-1510915933:98992..99266 | Clytia hemisphaerica | exon |
| TCONS_00009183-exon-sc0000091-1575043694:98992..99266 | TCONS_00009183-exon-sc0000091-1575043694:98992..99266 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000091 | supercontig | sc0000091:97280..99266 + |
Blast
The following BLAST results are available for this feature:
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