TCONS_00009184 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009184
Unique NameTCONS_00009184
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1269

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009184 ID=TCONS_00009184|Name=TCONS_00009184|organism=Clytia hemisphaerica|type=transcript|length=1269bp
aggttcccccatcccacttttcaggtgttcatttaggttcccactttagg
ttcccaggttcccccatcccacttatccggtatgccaaATTAAGCTATAA
TTTTAATAAGATGATCACATCTTTTCACTCCgctctaaaaagagaaaagt
ttttcgCTTTAAATACTCTTCTTAGTACAAGTAACAAGTTCATGTAGTAA
GATTGACGCGGATTTTACTTGTTCTCAAGATATTTAGGtttgaatatttc
atatatcCAAATTAGGCCATTaatatcctaactaggatatgaattctagc
ctaattaggcgaacatcctagtttggccatcatagcctaatttgcaatag
ttcctgactgcTGAAGGGATTAGTTATAGTCGCATCGAAGCATCCAAAAT
GGCGGCGCCGATTTTCATCGCAACGTTGTGTTTTATGTGGATAGTTTACA
TTTGGGAAACATACTTATCTTTCAGACAGTATAAAGTGTACCGTGACACT
GATGATGTTCCAGAGGAGCTCGAAGACTACATTGATGAGGAGACTTTTGA
AAAGTCACGGAGTTACCAACTCGACAAATCAAGATTTGGATTCATAGCTG
GATTATACTCACAAATTGAATCAACTGTAATCCTTTGGTTTTTCTGTATT
CCCTTGTTATGGAAATTCTCTGGAGATGTCAATGCTATGATTGGATTTGA
TGAAACTCACGAGATCAAGAGATCAATGTTGTTCATGGTGTTTGCATCCA
TCTTCTCCACCATCACAAGTCTTCCGTGGAGTTTGTATTCCACTTTCGTC
ATTGAAGAAAAACATGGCTTCAATAAACAAACACTTGGCTTTTTCTTCAA
AGACCTGGTCAAGAAGCTGGTTGTGAGCACTTTGATTACCCTCCCCATTA
CTGCAGCTATCATATGGATTGTCAAATGGGGTGGTGATTATTTCTTTGTT
TACGCTTGGTTGTTCTCTCTCACTGTGTCTCTGTTCATTATTTCCATCTA
TCATGATTACATTGCACCATTATTTGACCGATTCATCACCCTACCTGAAG
GTGAATTGAGGGAATCAATCGAGGCCTTGGCAAAGAGAATCGAGTTTCCA
TTGACCAAGATTTTTGTTGTCGAGGGATCGAAACGCTCCTCCCATAGCAA
TGCATATTTCTTTGGATTCTATAAGAAAAAGGTGATTGTGTTGTTCGATA
CTTTGTTGAAAGTAAGCCCATTTGAAGAAGAGAAACGcctaaaagaagaa
gaagaaaaaaagaagaaaa
Run BLAST on NCBI

transcript from alignment at sc0000091:155855..165331+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009184 ID=TCONS_00009184|Name=TCONS_00009184|organism=Clytia hemisphaerica|type=transcript|length=9477bp|location=Sequence derived from alignment at sc0000091:155855..165331+ (Clytia hemisphaerica)
aggttcccccatcccacttttcaggtgttcatttaggttcccactttagg
ttcccaggttcccccatcccacttatccggtatgccaaATTAAGCTATAA
TTTTAATAAGATGATCACATCTTTTCACTCCgctctaaaaagagaaaagt
ttttcgCTTTAAATACTCTTCTTAGTACAAGTAACAAGTTCATGTAGTAA
GATTGACGCGGATTTTACTTGTTCTCAAGATATTTAGGtttgaatatttc
atatatcCAAATTAGGCCATTaatatcctaactaggatatgaattctagc
ctaattaggcgaacatcctagtttggccatcatagcctaatttgcaatag
ttcctgactgcTGAAGGGATTAGTTATAGTCGCATCGAAGCATCCAAAAT
GGCGGCGCCGATTTTCATCGCAACGTTGTGTTTTATGTGGATAGTTTACA
TTTGGGAAACATACTTATCTTTCAGACAGGTATATTTTGCTTGATTTAAC
AGCTTATTTTCACTGAAGATAATACTTTTTAATGTAAATTCTGCCTCTGA
TAGCCTTTTTGCCAGTCAGGATGTTATCATATTGTCCAGTCTGTCAGTTA
CCAGccgtaattaatcgaacagttcgattaccgaactaatcgaactttgt
cgaacttaatcgaacgacaaaagcttgattaaattctttaatcgaacttt
tcaaaagtcgctaaaattgtgagtattcaattaaagtttgacaaagttcg
acaacgagaaatgttcgacaaatttgacaaaaaactcTGTTCGATAAAGT
TTGGCAACAAGAAaggttcgacaaattcgacaaaaaactctgtttgaaaa
agttcagcaacaaaaaatgacctcctttgggtactaccgtggacggcccc
tgggggtcccgacCCGGCTGCTGCGGGTTCCGGGAGAGTTTGATAGGTGC
CCACTGCGCACTGGTCAGgagggatgtgagggtacacgcctgcaccagcG
TGGGTGCTtaaaagttcctcaaagtgttgtcaaagttcgattagttcgat
taagttcgattaatgtaattggaactaatcgaactgtcgAGGTCTCTTTT
AAagaagttcgattaagttcgatttcagtaatcgaacttaatcgaacttt
gtattttgagaaatttgcgAGTATTCAATTAAAGTTCAACAACCGaactt
agtcgaacattaatcggccaacaaagttcgattaagttcgacaaagttcg
attaaaaataccgttcaattagttcgattaattacgtctggcaTATCAAA
TGAACTTTCACTGTTAATTTCCAGAGCTTTCTTTCAAAACGGCTGAGGCA
AATTAGGGAGTGCATGCCACCTAACCATGATAAATAAGTAACCAACCTGG
ATTTTCTTATAATCTACAAAACCTTGAGGATTtgacagtatagacttaaa
cttgtatatcaagattacgggatttcaaGTACGGGCCNatgcatatttta
aaaattatgcatggctgtatcattgtttttatgctggagtacataattat
tcaacatggctgcctctttaaaaaaaggtctattacgtCTGGGTTAGAGA
GGAGTAACCTGagctgagatcagattgtggttgttttctgcccaccacgc
tgaagctctaaagggatgggtgaaagaCATAACAATCTGGCGAATATGCA
AACTCCaagtcatgcaacttttgttgacgtcaaaccaaatgtttcatttt
tccgtgaactttgaacccttctaactttttttctatgtatgctaaagcgt
tccagtttttactaaaagaaagcccgtgatcttagctttcccaTGCGTGT
TCCAAAagacaaaacaatggaaatgcgTCAATCTGTTCAGCTGAccaaaa
tgacacaaaaatgacaaaatgaccTGTCAAGACATTCTAATATCTTTTTA
TTTGGTATCAACCAATTTCAATCTTAACAAAGGATAAATAAGCTTTTCAT
ATAGCCAAACAGAATtaccatagcttttaccaaaaaaaatatatcaaaga
ttcaatttcagccattttcagccaaatctaaCTTTTGTTCTTGCTGGGGC
TTCGTGGAAACTTATCCTGTCCATGTGTAAACATTCCCGTATGTTTGTTA
TGTACTTGACTACCCGTTGTCAAACCAGGATAAGACGGGGGTACtgcaat
aaaaagttatgcaagAAAAACCATAATTTCGACCTCAAAAGGGGACTTTC
TttgccaataacttttgatagaattgttCCCCTAATTTCCCCTTTTCAGT
AGGTCTTCCTCTATCTTATATGCTTCAGAAAACAATGCCCTAAAAGCTTA
GCCTCACGAAGCCCTGGCTAATAATATAACCCCCTGGTTATATCTTTGTA
TTCTTATCCTATAAATATAACGGAATGGCCATTCTACGGAAATTGCTGTC
ACGTGACTTTTTTCTACCGCGTGATACAAATCGCGCATTTTCATTggatg
ttgaaaatttatttgttaCGTCACAAGAAGTTCCGACttcacatttttaa
aaaacaaaatggcgaaaggacgttttttgatatttatgattattgaaaga
attcagttgattttaaggttttaattatttctttttcttttgccatgtgt
actaaaagatTCTACAATATTTGGGGAACTCAAATATccaaaagtttttc
tatttttcatggaaaaatgagctataAAGGCAATTTCTTTGCTTAAGGCA
TAGTTCGGACCCCCTCCTTCTTaaggggggatgacaccttccaaaaaagt
gaagaaggggggggggTCAGAGATTTTCACTAAAAAGGGGGGGGGGAGCA
AGGGGGGGGGGATTGTTTAAGAAGGGGGTTTACATATATTGTAGATTAAT
TTCCAGCACTGTTATGAAATTTGGTCTGCATGAaaggaagttctttattt
tcactaaaaagtggtattatatttgccagacttaatttttctttactgtt
tcccttccctttttaccataaaaaaattagcccgaaacccttgggggata
ggcatttttaaaggttggggggatgccaagaaggggggatcatttaagaa
ggggggatcagacccctttccacACTATGTtaaggtttgttttttcttcg
tgaactttcattttcaatctttctttaaagatttaatattttatcaatta
tcTTGGGATTTTGAGGGCTCATTCTAGAACTATTTGGGAGTAGAGAGCTT
TTTACAGATCTTGAAAAGGTTTACTAATTCTTTAGATATAGTTAAAAGTT
TAGACATTGGTAAAACTTATTTCTCCGATCGAACATTGACACACGCATTT
CCAAATTAAACACGCTCCAGctgtatataacactgtggacacgggctaga
cagAAAATTGGTAAATTGCAGAACGTTTTTGCAACATTTAAGATTTCGAA
TTCCGtgggaaaaaaaaaatagttgcAACTGTTGatgaacaaatgtttct
ggaaatggaggaaaaagtagttgaaggctgaaactttgtatgtttatcag
aaaaagggtgaggaattcaaaaatcacattcgctaattttagttctttca
ttttcatgtagtttttttcacttttttggttctatagcatgggaatgtcc
caaaaaaaaagtttttttttctgccgaaatggattttcttttggtttggg
gtttctcctttcagtcacagtcataaaactaaaaatcaGCGCTCATTGGT
TGTGACGTAGTTTACGAAATGGTTTAATATAAAATGACatactttttaac
aacttttttctacgtcatttttttgaagcctcttcgtaggagaatgtgtc
tttctataaggaattttacatctatccgcagacacgtgtttcgtcCTTCC
AAGGACTCATCAGTGCGACTCAGGTAAGCAAGCATAGACTgctgttgtca
ccagagtgctcaaaacactaaAGTGTTGAGCTTcgcataatcgcttgtgg
tgaaCGGAAAAGCAGAACTTGCTCCTCAACAGAGTCTAAAGAGTGCTCCA
ATATAattataaggaattttataacactttttttatgacacttcatggca
gattaaaaagacaatcagaaaacttttcattttcgcattaatgaggaaga
atgaaatttttagaagatgctgacttttagttttacgACTTGTTCACACT
CGTTTGGTTTCTGTcataaaaagaaagtcgttattgtgaactttgaacat
gcttaaaatcgaggtacttccactaactgacgcagctccgctcgcaacTC
Tagctactctaccatttttgttttgatttaactttgtattttaatgacca
gccaggtcattcatttgagggctgtgcaagtttccctccactgattcAAG
TTCCCGACTTCATGGTAGCTAATCGATATTAATCAATGAATTAGATATCG
ATTACTTTTCGGTACTGATTATTATCGATTACTCATCAATAGGCTATCGA
TTATTATCAATGAAATATCAATCAATATTGATTACCTTCCATCGATAATA
TTGATTACATCAATCAATTATTAAATGATCGATAATATTGATTGGATCGA
TAGCAATTGATAGCTAATCTAGTTGATCGATTAATATTgattagctatcg
attttaaTCCGATGATCGGTTTAAACGATTAAGATCGTCTGGACCTTTTC
ACCAGTCTGGGGGCAGGGAATCGGGCAGCCTGAAGTTTCTTGAAGGTAAA
TTGTTACGGGAAATCCATGTCGTCCACAGGCAGTATTATAATATAGCCGT
ATCTGTTCGTATAAAAGTTATGGGAAATttatatttggactttgtatcCA
GTGTTGTACACAAGCACTATGATGTTTGTatgatttcagattttttattt
acttcAATTGTTGCTTTTATCAAACTTTCCATCCTCTTGCAGTATAAAGT
GTACCGTGACACTGATGATGTTCCAGAGGAGCTCGAAGACTACATTGATG
AGGAGACTTTTGAAAAGTCACGGAGTTACCAACTCGACAAATCAAGATTT
GGATTCATAGCTGGATTATACTCACAAATTGAATCAACTGtaagtttttc
ttctttttatcccCCAATCTTTATTTAAAActatatttttccattttcca
ttcTTTGAAAGTTCTGTACCTTAAAGTGGGTAATTTTCAAGTGAACCTTT
TAGGCAAATcaagatttgaaattttgtgcATCGacattattttcataaat
tgacctattctaaaaatttcatgtggatttttggacctaccccggtggag
gtcctataaattaacctttgtccgttcgttcgttcgtccgttcgttcgtt
cgttcgttctttattagctttcctcatgattggctcgttagttttttctg
attttttgcacaaagatgcataactataaaccctcgaatgtgacggagcc
cgattttcaaaaaaaaaattttttgggccaatttgggccaaaaaacggct
aaaaaacgggttttttggactttgtgaaaaattaggtcgttaattttttc
tgattttttgcacaaagatgcataactataaaccctcgaatgtgacggag
cccgattttcaaaaaaaaaattttttgggccaatttgggccaaaaaacgg
ctaaaaaacgggttttttggactttgtgaaaaattaggtcgttaattttt
tctgattttttgcacaaagatgcataactatagaccctcgaatgtgacgg
agcccgattttcaaaaaaaaattttttgggccaatttgggccaacaaacg
gctaaaaaacgggttttttggactttgtgaaaaattaggtcgttaatttt
ttctgattttttgcatgaaagtagggtaccatcgtaggtaaaagatggct
taagcgaatttttgcaaaaaaattttgttggctcaaaaaaacgcatgttt
atctataagaatcactattaataagcatacatcaatgttcttagtcaaat
tactcaattttttttattagatagatgttttttatgctcaggagggctta
tttttaaagaatatgtgtgttttgGTTGCTTGacatgtttttatagaaaa
actggccaaattcgatatttttttataagcacattatcaattacttaggt
attagcttttttcgagattggctctttcattctttacggatttttgaaca
aagatgcataactatagaccctcgaatgtgacggagccagattttcaaat
aaaaatttttggggcaaatttgggccaaaaaacggctaaaaaaaagggtt
tttggactttgtgaaaaaatggatcattaattttttttgcatgaaagtag
ggtaccatcataggtaaaagatggctcaagcagaattttgcatttttatc
tataagaatcactattaataagcatacatcaatgttcttagtcaaattac
tcaattatttttatgagatatgattttttgctctcgaagtcttgaatatg
aaagaatatttcaagagcatgaaattttggtttctaaacgtgttttttta
taagaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNttctgaatgattgtttaatggtcacgct
tatgtagatatcaattatatatgtgttaaatgcataaacaggtaggtcca
taaaagtatcacttgttattctCGAAATGGGGCTTTGGTATTGAATGTAG
CAATTTCGAATATTTTTAATTAACATATTGGTTACCCATCTGctatttta
cattttcatatattttgtccaaagaaggaaaataaaggttgaaaatgggg
aaaatacaATTTCATTGATGTATTTCGATTTTTGTGAGATTTTATTTGTA
CTATTGGAAATTTTTCGTGGACTCAAAAACTAATCTACTATTGAATTCTT
AAATATCAGTTCtaataattttgttttctaGGTAATCCTTTGGTTTTTCT
GTATTCCCTTGTTATGGAAATTCTCTGGAGATGTCAATGCTATGATTGGA
TTTGATGAAACTCACGAGGTAATTAGACTAAAATATTACTTTTGTCATGA
TAAAGAGATAATTTTATTGAgtgattggaaaaaaattatatgaTTTTTAA
GGGCCAACAGATTCTCTCAAACAAAGTTTACTTTAAAGAATAATTTCATG
GTGGCCAGCGACCTTTGaattccttgaaacccttgaaacaaccttgattt
ttttcctacccttggaaattttctttgaaacccttgaaaaatcaatttaa
tctctgaaatacaaaatttttcctACCGAGTCGGATACAAACATCACTGA
ATTAAATTAGAAAACATACTTTTGGAACCCCTGAGATTCAAGGGGTTATT
CCCGCTCATTCTTTAGGGGTTTACATCCATTAGGTACCACTGGAATTATA
TGAGATCGGCAGGTCTGGGTGATAGAATGGGTGGTTGTAAAATTATACTA
GCTTCTGATTTGTGTTCATTTTCCGCCCATCTAAAGTGTACTTAAAATCA
TAGATTCTCTCCGTCGGGCCCAACTATAGTGGGCCCTCCTTTGCTACAAC
TATAAAGAAAGTATCTGCTGAAGAATGTTATTGAGGTTCTGTTCAAAATC
AAGGGAATTGGAAAGACTGATTTGCTTGAAAGATTTCAaggtttttatga
tttttaaggAGGATGaattgaaaattcaacctttctccTATTGTCGACAG
ATTTCCTTGAAATTCTTGAAAACTAGCAAAGATCAACTAAAAACCCTAGA
AATCCtggaaaattagtcaaaaatgaCCCTTTGAAACCCTTGAATTTGGT
GAAAAAGAAGTGCTGGCCACCATGAATTTACACTAGATAGCTTGTGATAT
ATTCGATTGCTATTTATTGGCCTCAAATTTCGTGTATATACAACACACTG
TGATAAGTTAGGTTATGGATAAAGGTCTTTGTCTTTGTCAGGGAAAATTT
AAAGTAAGACCGGTGacgaataaataaattttcaagttGCCCTCAAAATG
AAATTGGAAAGTTTGTACAAAATCACTGCACGTCTATTGACTTTTCTTCT
CCTTTAGATCAAGAGATCAATGTTGTTCATGGTGTTTGCATCCATCTTCT
CCACCATCACAAGTCTTCCGTGGAGTTTGTATTCCACTTTCGTCATTGAA
GAAAAACATGGCTTCAATAAACAAGTACGTAGGGGTCACATGTCTGTGTT
TTCAATTCTGCTATTTGAGAAATTCAAGCAAAACCTcacatttcttgata
ttttaggctaatttatttattttttattttaatttttttttcaaactttt
tttaaattgatatcGTGAAAGAAATTATTTTCCAGCTAAAAAGTTAAACA
GTTATTCATGAAAATACTTAACTTTGGCTTGTCACGTTTTGCTATTATTT
TTTAGACACTTGGCTTTTTCTTCAAAGACCTGGTCAAGAAGCTGGTTGTG
AGCACTTTGATTACCCTCCCCATTACTGCAGCTATCATATGGATTGTCAA
ATGGGGTGGTGATTATTTCTTTGTTTACGCTTGGTTGTTCTCTCTCACTG
TGTCTCTGGTACGTATTGTGCTTTGTTTTCTTCAATAACATTCTTATAAT
AGCcgtttcaataaaaatatcatGATAAAAGGAAAACTTTTATTTGTTAG
AATAAACTTTCATGAATCAGCTTTTCATAATATATTGCCAAACCAAATCg
cgaatgtaaacaaaatacatgttttttaagcAAGTGGCTGCCCCTTTGTC
AGGCTTGTATGCTGGctactcaatttttttcactCCTTCATATTTTTCCA
GTTCATTATTTCCATCTATCATGATTACATTGCACCATTATTTGACCGAT
TCATCACCCTACCTGAAGGTGAATTGAGGGAATCAATCGAGGCCTTGGCA
AAGAGAATCGAGTTTCCATTGACCAAGATTTTTGTTGTCGAGGGATCGAA
ACGCTCCTCCCATAGCAATGCATATTTCTTTGGATTCTATAAGAAAAAGG
TAAGACACATGTCCTTTGGTAATTTAAGAAGCTTTTCTTTTAATCAGGTT
TCAGAGACCTTAGCAATCTgaatattgaaaaatttttgaagagagCTCAA
ATTCTCGGAAAATTATACATCGATCTCAAGTAATCTTTAAGCATAAAGAT
GTATAACTCAGTAAATGGCAGTCTAGAACCCTTACGACACTTGTCTCAAC
GAGATGGAATTGAAATCTTGAATCTTGCTTTTATTGTAGGTGATTGTGTT
GTTCGATACTTTGTTGAAAGTAAGCCCATTTGAAGAAGAGAAACGcctaa
aagaagaagaagaaaaaaagaagaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005158XLOC_005158Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009184-exon-sc0000091-1491911889:155855..156333TCONS_00009184-exon-sc0000091-1491911889:155855..156333Clytia hemisphaericaexon
TCONS_00009184-exon-sc0000091-1510915933:155855..156333TCONS_00009184-exon-sc0000091-1510915933:155855..156333Clytia hemisphaericaexon
TCONS_00009184-exon-sc0000091-1575043694:155855..156333TCONS_00009184-exon-sc0000091-1575043694:155855..156333Clytia hemisphaericaexon
TCONS_00009184-exon-sc0000091-1491911889:160797..160943TCONS_00009184-exon-sc0000091-1491911889:160797..160943Clytia hemisphaericaexon
TCONS_00009184-exon-sc0000091-1510915933:160797..160943TCONS_00009184-exon-sc0000091-1510915933:160797..160943Clytia hemisphaericaexon
TCONS_00009184-exon-sc0000091-1575043694:160797..160943TCONS_00009184-exon-sc0000091-1575043694:160797..160943Clytia hemisphaericaexon
TCONS_00009184-exon-sc0000091-1491911889:162936..163022TCONS_00009184-exon-sc0000091-1491911889:162936..163022Clytia hemisphaericaexon
TCONS_00009184-exon-sc0000091-1510915933:162936..163022TCONS_00009184-exon-sc0000091-1510915933:162936..163022Clytia hemisphaericaexon
TCONS_00009184-exon-sc0000091-1575043694:162936..163022TCONS_00009184-exon-sc0000091-1575043694:162936..163022Clytia hemisphaericaexon
TCONS_00009184-exon-sc0000091-1491911889:164062..164178TCONS_00009184-exon-sc0000091-1491911889:164062..164178Clytia hemisphaericaexon
TCONS_00009184-exon-sc0000091-1510915933:164062..164178TCONS_00009184-exon-sc0000091-1510915933:164062..164178Clytia hemisphaericaexon
TCONS_00009184-exon-sc0000091-1575043694:164062..164178TCONS_00009184-exon-sc0000091-1575043694:164062..164178Clytia hemisphaericaexon
TCONS_00009184-exon-sc0000091-1491911889:164410..164562TCONS_00009184-exon-sc0000091-1491911889:164410..164562Clytia hemisphaericaexon
TCONS_00009184-exon-sc0000091-1510915933:164410..164562TCONS_00009184-exon-sc0000091-1510915933:164410..164562Clytia hemisphaericaexon
TCONS_00009184-exon-sc0000091-1575043694:164410..164562TCONS_00009184-exon-sc0000091-1575043694:164410..164562Clytia hemisphaericaexon
TCONS_00009184-exon-sc0000091-1491911889:164806..165003TCONS_00009184-exon-sc0000091-1491911889:164806..165003Clytia hemisphaericaexon
TCONS_00009184-exon-sc0000091-1510915933:164806..165003TCONS_00009184-exon-sc0000091-1510915933:164806..165003Clytia hemisphaericaexon
TCONS_00009184-exon-sc0000091-1575043694:164806..165003TCONS_00009184-exon-sc0000091-1575043694:164806..165003Clytia hemisphaericaexon
TCONS_00009184-exon-sc0000091-1491911889:165244..165331TCONS_00009184-exon-sc0000091-1491911889:165244..165331Clytia hemisphaericaexon
TCONS_00009184-exon-sc0000091-1510915933:165244..165331TCONS_00009184-exon-sc0000091-1510915933:165244..165331Clytia hemisphaericaexon
TCONS_00009184-exon-sc0000091-1575043694:165244..165331TCONS_00009184-exon-sc0000091-1575043694:165244..165331Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000091supercontigsc0000091:155855..165331 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
21.1634	19.9496	5.90067	2.01721	0	0	0	0	9.99183	10.8903	6.68494	8.80108	7.52441	8.62597	8.54464	10.1482	8.66573	8.9702	4.39246	6.90337	13.4908	12.638	15.9855	14.7629	0	0	10.8534	7.88496	14.2235	11.5448
Blast
[Close]
BLAST of TCONS_00009184 vs. Swiss-Prot (Human)
Match: FACE1 (CAAX prenyl protease 1 homolog OS=Homo sapiens GN=ZMPSTE24 PE=1 SV=2)

HSP 1 Score: 329.717 bits (844), Expect = 1.316e-107
Identity = 164/267 (61.42%), Postives = 210/267 (78.65%), Query Frame = 3 
Query:  411 IFIATLCFMWIVYIWETYLSFRQYKVYRDTDDVPEELEDYIDEETFEKSRSYQLDKSRFGFIAGLYSQIESTVILWFFCIPLLWKFSGDVNAMIGFDETHEIKRSMLFMVFASIFSTITSLPWSLYSTFVIEEKHGFNKQTLGFFFKDLVKKLVVSXXXXXXXXXXXXXXVKWGGDYFFVYAWLFSLTVSLFIISIYHDYIAPLFDRFITLPEGELRESIEALAKRIEFPLTKIFVVEGSKRSSHSNAYFFGFYKKKVIVLFDTLLK 1211
            IF A L F W VY+WET+L+ RQ ++Y+ T  VP EL   +D ETFEKSR YQLDKS F F +GLYS+ E T+IL F  IP LW+ SG      GF   +EI +S++F++ A++FS +T LPWSLY+TFVIEEKHGFN+QTLGFF KD +KK VV+  I LP+++ +++I+K GGDYFF+YAWLF+L VSL +++IY DYIAPLFD+F  LPEG+L+E IE +AK I+FPLTK++VVEGSKRSSHSNAYF+GF+K K IVLFDTLL+
Sbjct:   19 IFGAVLLFSWTVYLWETFLAQRQRRIYKTTTHVPPELGQIMDSETFEKSRLYQLDKSTFSFWSGLYSETEGTLILLFGGIPYLWRLSGRFCGYAGFGPEYEITQSLVFLLLATLFSALTGLPWSLYNTFVIEEKHGFNQQTLGFFMKDAIKKFVVTQCILLPVSSLLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYADYIAPLFDKFTPLPEGKLKEEIEVMAKSIDFPLTKVYVVEGSKRSSHSNAYFYGFFKNKRIVLFDTLLE 285
The following BLAST results are available for this feature:
BLAST of TCONS_00009184 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FACE11.316e-10761.42CAAX prenyl protease 1 homolog OS=Homo sapiens GN=... [more]
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