TCONS_00009186 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009186
Unique NameTCONS_00009186
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2151

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009186 ID=TCONS_00009186|Name=TCONS_00009186|organism=Clytia hemisphaerica|type=transcript|length=2151bp
aggttcccccatcccacttttcaggtgttcatttaggttcccactttagg
ttcccaggttcccccatcccacttatccggtatgccaaATTAAGCTATAA
TTTTAATAAGATGATCACATCTTTTCACTCCgctctaaaaagagaaaagt
ttttcgCTTTAAATACTCTTCTTAGTACAAGTAACAAGTTCATGTAGTAA
GATTGACGCGGATTTTACTTGTTCTCAAGATATTTAGGtttgaatatttc
atatatcCAAATTAGGCCATTaatatcctaactaggatatgaattctagc
ctaattaggcgaacatcctagtttggccatcatagcctaatttgcaatag
ttcctgactgcTGAAGGGATTAGTTATAGTCGCATCGAAGCATCCAAAAT
GGCGGCGCCGATTTTCATCGCAACGTTGTGTTTTATGTGGATAGTTTACA
TTTGGGAAACATACTTATCTTTCAGACAGTATAAAGTGTACCGTGACACT
GATGATGTTCCAGAGGAGCTCGAAGACTACATTGATGAGGAGACTTTTGA
AAAGTCACGGAGTTACCAACTCGACAAATCAAGATTTGGATTCATAGCTG
GATTATACTCACAAATTGAATCAACTGTAATCCTTTGGTTTTTCTGTATT
CCCTTGTTATGGAAATTCTCTGGAGATGTCAATGCTATGATTGGATTTGA
TGAAACTCACGAGATCAAGAGATCAATGTTGTTCATGGTGTTTGCATCCA
TCTTCTCCACCATCACAAGTCTTCCGTGGAGTTTGTATTCCACTTTCGTC
ATTGAAGAAAAACATGGCTTCAATAAACAAACACTTGGCTTTTTCTTCAA
AGACCTGGTCAAGAAGCTGGTTGTGAGCACTTTGATTACCCTCCCCATTA
CTGCAGCTATCATATGGATTGTCAAATGGGGTGGTGATTATTTCTTTGTT
TACGCTTGGTTGTTCTCTCTCACTGTGTCTCTGTTCATTATTTCCATCTA
TCATGATTACATTGCACCATTATTTGACCGATTCATCACCCTACCTGAAG
GTGAATTGAGGGAATCAATCGAGGCCTTGGCAAAGAGAATCGAGTTTCCA
TTGACCAAGATTTTTGTTGTCGAGGGATCGAAACGCTCCTCCCATAGCAA
TGCATATTTCTTTGGATTCTATAAGAAAAAGGTGATTGTGTTGTTCGATA
CTTTGTTGAAAGTAAGCCCATTTGAAGAAGAGAAACGcctaaaagaagaa
gaagaaaaaaagaagaaaattgaagagGAAGGAGAAGGCAACCAACAAGA
TGAAACAGAAGAAAAAGATGGCGAATCAAAGGAAAAGAATGAATCATCGG
AAGGAGGAAACACGGAGAAGAAGAAGGAAGAGAAAGGCTGTTCAGATGAA
GAAATCCTCGCCATCCTCGGTCATGAACTTGGTCACTGGAAACTCAATCA
CATCCTCAAAAATCTGGCCATCAGTCAAGTGAATTTGTTGTTATCTTTCT
TCGTGTTCGGCTTGCTAATGAACAACAGCATGCTGTACGAAAGCTTTGGA
TTTTACAACGAGATGCCGACACTTATCGGATTGATGATCATCTTTCAATT
CGTCTTCTCTCCTTATAATGAGCTGATGGGATTTCTGATGACCGTCTTGA
GTCGACGATTCGAGTTCCAAGCGGACGAGTTCGGAAAAAGTCTTGGATAT
GGTGTCAAATTACAATCTGCTCTCATCAAACTTCATAAAGAAAACCTCGG
GTTTCCAGCGGCTGATAAATTATACTCTGCATATCATTATTCACATCCAC
CTTTGTTAGAACGCTTGAAAGCTCTTCAAACGtccaacaaaaagaaagaa
tgaaCACGAAGATAAAACTAGATCTTAATGTTGTATAGAATTATAAACAC
TTTGTTGGAAATTTGGAATCAGCTTTTTTTGGAATTAACTTTCTAGAATC
TTTAGGATATACtttatgaatttttgtaaaGAGAATGAAATATTTAACAG
AGCGAAATAGAAATTGGTAAATCCGAAAAACTCATCAAATGGTATATTCC
AATTTATTCGATCTTCGATCAAAGGTTACAGTCACCTAATTGTCCTATGt
ttttgggacaagctggagtttttacaagctcttatgtgatttggttggtc
g
Run BLAST on NCBI

transcript from alignment at sc0000091:155855..169475+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009186 ID=TCONS_00009186|Name=TCONS_00009186|organism=Clytia hemisphaerica|type=transcript|length=13621bp|location=Sequence derived from alignment at sc0000091:155855..169475+ (Clytia hemisphaerica)
aggttcccccatcccacttttcaggtgttcatttaggttcccactttagg
ttcccaggttcccccatcccacttatccggtatgccaaATTAAGCTATAA
TTTTAATAAGATGATCACATCTTTTCACTCCgctctaaaaagagaaaagt
ttttcgCTTTAAATACTCTTCTTAGTACAAGTAACAAGTTCATGTAGTAA
GATTGACGCGGATTTTACTTGTTCTCAAGATATTTAGGtttgaatatttc
atatatcCAAATTAGGCCATTaatatcctaactaggatatgaattctagc
ctaattaggcgaacatcctagtttggccatcatagcctaatttgcaatag
ttcctgactgcTGAAGGGATTAGTTATAGTCGCATCGAAGCATCCAAAAT
GGCGGCGCCGATTTTCATCGCAACGTTGTGTTTTATGTGGATAGTTTACA
TTTGGGAAACATACTTATCTTTCAGACAGGTATATTTTGCTTGATTTAAC
AGCTTATTTTCACTGAAGATAATACTTTTTAATGTAAATTCTGCCTCTGA
TAGCCTTTTTGCCAGTCAGGATGTTATCATATTGTCCAGTCTGTCAGTTA
CCAGccgtaattaatcgaacagttcgattaccgaactaatcgaactttgt
cgaacttaatcgaacgacaaaagcttgattaaattctttaatcgaacttt
tcaaaagtcgctaaaattgtgagtattcaattaaagtttgacaaagttcg
acaacgagaaatgttcgacaaatttgacaaaaaactcTGTTCGATAAAGT
TTGGCAACAAGAAaggttcgacaaattcgacaaaaaactctgtttgaaaa
agttcagcaacaaaaaatgacctcctttgggtactaccgtggacggcccc
tgggggtcccgacCCGGCTGCTGCGGGTTCCGGGAGAGTTTGATAGGTGC
CCACTGCGCACTGGTCAGgagggatgtgagggtacacgcctgcaccagcG
TGGGTGCTtaaaagttcctcaaagtgttgtcaaagttcgattagttcgat
taagttcgattaatgtaattggaactaatcgaactgtcgAGGTCTCTTTT
AAagaagttcgattaagttcgatttcagtaatcgaacttaatcgaacttt
gtattttgagaaatttgcgAGTATTCAATTAAAGTTCAACAACCGaactt
agtcgaacattaatcggccaacaaagttcgattaagttcgacaaagttcg
attaaaaataccgttcaattagttcgattaattacgtctggcaTATCAAA
TGAACTTTCACTGTTAATTTCCAGAGCTTTCTTTCAAAACGGCTGAGGCA
AATTAGGGAGTGCATGCCACCTAACCATGATAAATAAGTAACCAACCTGG
ATTTTCTTATAATCTACAAAACCTTGAGGATTtgacagtatagacttaaa
cttgtatatcaagattacgggatttcaaGTACGGGCCNatgcatatttta
aaaattatgcatggctgtatcattgtttttatgctggagtacataattat
tcaacatggctgcctctttaaaaaaaggtctattacgtCTGGGTTAGAGA
GGAGTAACCTGagctgagatcagattgtggttgttttctgcccaccacgc
tgaagctctaaagggatgggtgaaagaCATAACAATCTGGCGAATATGCA
AACTCCaagtcatgcaacttttgttgacgtcaaaccaaatgtttcatttt
tccgtgaactttgaacccttctaactttttttctatgtatgctaaagcgt
tccagtttttactaaaagaaagcccgtgatcttagctttcccaTGCGTGT
TCCAAAagacaaaacaatggaaatgcgTCAATCTGTTCAGCTGAccaaaa
tgacacaaaaatgacaaaatgaccTGTCAAGACATTCTAATATCTTTTTA
TTTGGTATCAACCAATTTCAATCTTAACAAAGGATAAATAAGCTTTTCAT
ATAGCCAAACAGAATtaccatagcttttaccaaaaaaaatatatcaaaga
ttcaatttcagccattttcagccaaatctaaCTTTTGTTCTTGCTGGGGC
TTCGTGGAAACTTATCCTGTCCATGTGTAAACATTCCCGTATGTTTGTTA
TGTACTTGACTACCCGTTGTCAAACCAGGATAAGACGGGGGTACtgcaat
aaaaagttatgcaagAAAAACCATAATTTCGACCTCAAAAGGGGACTTTC
TttgccaataacttttgatagaattgttCCCCTAATTTCCCCTTTTCAGT
AGGTCTTCCTCTATCTTATATGCTTCAGAAAACAATGCCCTAAAAGCTTA
GCCTCACGAAGCCCTGGCTAATAATATAACCCCCTGGTTATATCTTTGTA
TTCTTATCCTATAAATATAACGGAATGGCCATTCTACGGAAATTGCTGTC
ACGTGACTTTTTTCTACCGCGTGATACAAATCGCGCATTTTCATTggatg
ttgaaaatttatttgttaCGTCACAAGAAGTTCCGACttcacatttttaa
aaaacaaaatggcgaaaggacgttttttgatatttatgattattgaaaga
attcagttgattttaaggttttaattatttctttttcttttgccatgtgt
actaaaagatTCTACAATATTTGGGGAACTCAAATATccaaaagtttttc
tatttttcatggaaaaatgagctataAAGGCAATTTCTTTGCTTAAGGCA
TAGTTCGGACCCCCTCCTTCTTaaggggggatgacaccttccaaaaaagt
gaagaaggggggggggTCAGAGATTTTCACTAAAAAGGGGGGGGGGAGCA
AGGGGGGGGGGATTGTTTAAGAAGGGGGTTTACATATATTGTAGATTAAT
TTCCAGCACTGTTATGAAATTTGGTCTGCATGAaaggaagttctttattt
tcactaaaaagtggtattatatttgccagacttaatttttctttactgtt
tcccttccctttttaccataaaaaaattagcccgaaacccttgggggata
ggcatttttaaaggttggggggatgccaagaaggggggatcatttaagaa
ggggggatcagacccctttccacACTATGTtaaggtttgttttttcttcg
tgaactttcattttcaatctttctttaaagatttaatattttatcaatta
tcTTGGGATTTTGAGGGCTCATTCTAGAACTATTTGGGAGTAGAGAGCTT
TTTACAGATCTTGAAAAGGTTTACTAATTCTTTAGATATAGTTAAAAGTT
TAGACATTGGTAAAACTTATTTCTCCGATCGAACATTGACACACGCATTT
CCAAATTAAACACGCTCCAGctgtatataacactgtggacacgggctaga
cagAAAATTGGTAAATTGCAGAACGTTTTTGCAACATTTAAGATTTCGAA
TTCCGtgggaaaaaaaaaatagttgcAACTGTTGatgaacaaatgtttct
ggaaatggaggaaaaagtagttgaaggctgaaactttgtatgtttatcag
aaaaagggtgaggaattcaaaaatcacattcgctaattttagttctttca
ttttcatgtagtttttttcacttttttggttctatagcatgggaatgtcc
caaaaaaaaagtttttttttctgccgaaatggattttcttttggtttggg
gtttctcctttcagtcacagtcataaaactaaaaatcaGCGCTCATTGGT
TGTGACGTAGTTTACGAAATGGTTTAATATAAAATGACatactttttaac
aacttttttctacgtcatttttttgaagcctcttcgtaggagaatgtgtc
tttctataaggaattttacatctatccgcagacacgtgtttcgtcCTTCC
AAGGACTCATCAGTGCGACTCAGGTAAGCAAGCATAGACTgctgttgtca
ccagagtgctcaaaacactaaAGTGTTGAGCTTcgcataatcgcttgtgg
tgaaCGGAAAAGCAGAACTTGCTCCTCAACAGAGTCTAAAGAGTGCTCCA
ATATAattataaggaattttataacactttttttatgacacttcatggca
gattaaaaagacaatcagaaaacttttcattttcgcattaatgaggaaga
atgaaatttttagaagatgctgacttttagttttacgACTTGTTCACACT
CGTTTGGTTTCTGTcataaaaagaaagtcgttattgtgaactttgaacat
gcttaaaatcgaggtacttccactaactgacgcagctccgctcgcaacTC
Tagctactctaccatttttgttttgatttaactttgtattttaatgacca
gccaggtcattcatttgagggctgtgcaagtttccctccactgattcAAG
TTCCCGACTTCATGGTAGCTAATCGATATTAATCAATGAATTAGATATCG
ATTACTTTTCGGTACTGATTATTATCGATTACTCATCAATAGGCTATCGA
TTATTATCAATGAAATATCAATCAATATTGATTACCTTCCATCGATAATA
TTGATTACATCAATCAATTATTAAATGATCGATAATATTGATTGGATCGA
TAGCAATTGATAGCTAATCTAGTTGATCGATTAATATTgattagctatcg
attttaaTCCGATGATCGGTTTAAACGATTAAGATCGTCTGGACCTTTTC
ACCAGTCTGGGGGCAGGGAATCGGGCAGCCTGAAGTTTCTTGAAGGTAAA
TTGTTACGGGAAATCCATGTCGTCCACAGGCAGTATTATAATATAGCCGT
ATCTGTTCGTATAAAAGTTATGGGAAATttatatttggactttgtatcCA
GTGTTGTACACAAGCACTATGATGTTTGTatgatttcagattttttattt
acttcAATTGTTGCTTTTATCAAACTTTCCATCCTCTTGCAGTATAAAGT
GTACCGTGACACTGATGATGTTCCAGAGGAGCTCGAAGACTACATTGATG
AGGAGACTTTTGAAAAGTCACGGAGTTACCAACTCGACAAATCAAGATTT
GGATTCATAGCTGGATTATACTCACAAATTGAATCAACTGtaagtttttc
ttctttttatcccCCAATCTTTATTTAAAActatatttttccattttcca
ttcTTTGAAAGTTCTGTACCTTAAAGTGGGTAATTTTCAAGTGAACCTTT
TAGGCAAATcaagatttgaaattttgtgcATCGacattattttcataaat
tgacctattctaaaaatttcatgtggatttttggacctaccccggtggag
gtcctataaattaacctttgtccgttcgttcgttcgtccgttcgttcgtt
cgttcgttctttattagctttcctcatgattggctcgttagttttttctg
attttttgcacaaagatgcataactataaaccctcgaatgtgacggagcc
cgattttcaaaaaaaaaattttttgggccaatttgggccaaaaaacggct
aaaaaacgggttttttggactttgtgaaaaattaggtcgttaattttttc
tgattttttgcacaaagatgcataactataaaccctcgaatgtgacggag
cccgattttcaaaaaaaaaattttttgggccaatttgggccaaaaaacgg
ctaaaaaacgggttttttggactttgtgaaaaattaggtcgttaattttt
tctgattttttgcacaaagatgcataactatagaccctcgaatgtgacgg
agcccgattttcaaaaaaaaattttttgggccaatttgggccaacaaacg
gctaaaaaacgggttttttggactttgtgaaaaattaggtcgttaatttt
ttctgattttttgcatgaaagtagggtaccatcgtaggtaaaagatggct
taagcgaatttttgcaaaaaaattttgttggctcaaaaaaacgcatgttt
atctataagaatcactattaataagcatacatcaatgttcttagtcaaat
tactcaattttttttattagatagatgttttttatgctcaggagggctta
tttttaaagaatatgtgtgttttgGTTGCTTGacatgtttttatagaaaa
actggccaaattcgatatttttttataagcacattatcaattacttaggt
attagcttttttcgagattggctctttcattctttacggatttttgaaca
aagatgcataactatagaccctcgaatgtgacggagccagattttcaaat
aaaaatttttggggcaaatttgggccaaaaaacggctaaaaaaaagggtt
tttggactttgtgaaaaaatggatcattaattttttttgcatgaaagtag
ggtaccatcataggtaaaagatggctcaagcagaattttgcatttttatc
tataagaatcactattaataagcatacatcaatgttcttagtcaaattac
tcaattatttttatgagatatgattttttgctctcgaagtcttgaatatg
aaagaatatttcaagagcatgaaattttggtttctaaacgtgttttttta
taagaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNttctgaatgattgtttaatggtcacgct
tatgtagatatcaattatatatgtgttaaatgcataaacaggtaggtcca
taaaagtatcacttgttattctCGAAATGGGGCTTTGGTATTGAATGTAG
CAATTTCGAATATTTTTAATTAACATATTGGTTACCCATCTGctatttta
cattttcatatattttgtccaaagaaggaaaataaaggttgaaaatgggg
aaaatacaATTTCATTGATGTATTTCGATTTTTGTGAGATTTTATTTGTA
CTATTGGAAATTTTTCGTGGACTCAAAAACTAATCTACTATTGAATTCTT
AAATATCAGTTCtaataattttgttttctaGGTAATCCTTTGGTTTTTCT
GTATTCCCTTGTTATGGAAATTCTCTGGAGATGTCAATGCTATGATTGGA
TTTGATGAAACTCACGAGGTAATTAGACTAAAATATTACTTTTGTCATGA
TAAAGAGATAATTTTATTGAgtgattggaaaaaaattatatgaTTTTTAA
GGGCCAACAGATTCTCTCAAACAAAGTTTACTTTAAAGAATAATTTCATG
GTGGCCAGCGACCTTTGaattccttgaaacccttgaaacaaccttgattt
ttttcctacccttggaaattttctttgaaacccttgaaaaatcaatttaa
tctctgaaatacaaaatttttcctACCGAGTCGGATACAAACATCACTGA
ATTAAATTAGAAAACATACTTTTGGAACCCCTGAGATTCAAGGGGTTATT
CCCGCTCATTCTTTAGGGGTTTACATCCATTAGGTACCACTGGAATTATA
TGAGATCGGCAGGTCTGGGTGATAGAATGGGTGGTTGTAAAATTATACTA
GCTTCTGATTTGTGTTCATTTTCCGCCCATCTAAAGTGTACTTAAAATCA
TAGATTCTCTCCGTCGGGCCCAACTATAGTGGGCCCTCCTTTGCTACAAC
TATAAAGAAAGTATCTGCTGAAGAATGTTATTGAGGTTCTGTTCAAAATC
AAGGGAATTGGAAAGACTGATTTGCTTGAAAGATTTCAaggtttttatga
tttttaaggAGGATGaattgaaaattcaacctttctccTATTGTCGACAG
ATTTCCTTGAAATTCTTGAAAACTAGCAAAGATCAACTAAAAACCCTAGA
AATCCtggaaaattagtcaaaaatgaCCCTTTGAAACCCTTGAATTTGGT
GAAAAAGAAGTGCTGGCCACCATGAATTTACACTAGATAGCTTGTGATAT
ATTCGATTGCTATTTATTGGCCTCAAATTTCGTGTATATACAACACACTG
TGATAAGTTAGGTTATGGATAAAGGTCTTTGTCTTTGTCAGGGAAAATTT
AAAGTAAGACCGGTGacgaataaataaattttcaagttGCCCTCAAAATG
AAATTGGAAAGTTTGTACAAAATCACTGCACGTCTATTGACTTTTCTTCT
CCTTTAGATCAAGAGATCAATGTTGTTCATGGTGTTTGCATCCATCTTCT
CCACCATCACAAGTCTTCCGTGGAGTTTGTATTCCACTTTCGTCATTGAA
GAAAAACATGGCTTCAATAAACAAGTACGTAGGGGTCACATGTCTGTGTT
TTCAATTCTGCTATTTGAGAAATTCAAGCAAAACCTcacatttcttgata
ttttaggctaatttatttattttttattttaatttttttttcaaactttt
tttaaattgatatcGTGAAAGAAATTATTTTCCAGCTAAAAAGTTAAACA
GTTATTCATGAAAATACTTAACTTTGGCTTGTCACGTTTTGCTATTATTT
TTTAGACACTTGGCTTTTTCTTCAAAGACCTGGTCAAGAAGCTGGTTGTG
AGCACTTTGATTACCCTCCCCATTACTGCAGCTATCATATGGATTGTCAA
ATGGGGTGGTGATTATTTCTTTGTTTACGCTTGGTTGTTCTCTCTCACTG
TGTCTCTGGTACGTATTGTGCTTTGTTTTCTTCAATAACATTCTTATAAT
AGCcgtttcaataaaaatatcatGATAAAAGGAAAACTTTTATTTGTTAG
AATAAACTTTCATGAATCAGCTTTTCATAATATATTGCCAAACCAAATCg
cgaatgtaaacaaaatacatgttttttaagcAAGTGGCTGCCCCTTTGTC
AGGCTTGTATGCTGGctactcaatttttttcactCCTTCATATTTTTCCA
GTTCATTATTTCCATCTATCATGATTACATTGCACCATTATTTGACCGAT
TCATCACCCTACCTGAAGGTGAATTGAGGGAATCAATCGAGGCCTTGGCA
AAGAGAATCGAGTTTCCATTGACCAAGATTTTTGTTGTCGAGGGATCGAA
ACGCTCCTCCCATAGCAATGCATATTTCTTTGGATTCTATAAGAAAAAGG
TAAGACACATGTCCTTTGGTAATTTAAGAAGCTTTTCTTTTAATCAGGTT
TCAGAGACCTTAGCAATCTgaatattgaaaaatttttgaagagagCTCAA
ATTCTCGGAAAATTATACATCGATCTCAAGTAATCTTTAAGCATAAAGAT
GTATAACTCAGTAAATGGCAGTCTAGAACCCTTACGACACTTGTCTCAAC
GAGATGGAATTGAAATCTTGAATCTTGCTTTTATTGTAGGTGATTGTGTT
GTTCGATACTTTGTTGAAAGTAAGCCCATTTGAAGAAGAGAAACGcctaa
aagaagaagaagaaaaaaagaagaaaatNGCGTATTGTGCTTTGTTTTCT
TCAATAACATTCTTATAATAGCcgtttcaataaaaatatcatgataaaag
gaaaacttttttttgttaaaataaacTTTCATGAATCAGCTTTTCATAAT
ATATTGCCAAACCAAATCGCGAATGTAAacaaatacatgttttttaagcA
AGTGGCTGCCCCTTTGTCAGGCTTGTATGCTGGctactcaatttttttca
ctCCTTCATATTTTTCCAGTTCATTATTTCCATCTATCATGATTACATTG
CACCATTATTTGACCGATTCATCACCCTACCTGAAGGTGAATTGAGGGAA
TCAATCGAGGCCTTGGCAAAGAGAATCGAGTTTCCATTGACCAAGATTTT
TGTTGTCGAGGGATCGAAACGCTCCTCCCATAGCAATGCATATTTCTTTG
GATTCTATAAGAAAAAGGTAAGACACATGTCCTTTGGTAATTTAAGAAGC
TTTTCTTTTAATCAGGTTTCAGAGACCTTAGCAATCTgaatattgaaaaa
tttttgaagagagCTCAAATTCTCGGAAAATTATACATCGATCTCAAGTA
ATCTTTAAGCATAAAGATGTATAACTCAGTAAATGGCAGTCTAGAACCCT
TACGACACTTGTCTCAACGAGATGGAATTGAAATCTTGAATCTTGCTTTT
ATTGTAGGTGATTGTGTTGTTCGATACTTTGTTGAAAGTAAGCCCATTTG
AAGAAGAGAAACGcctaaaagaagaagaagaaaaaaagaagaaaattgaa
gagGTGAGTACAAGAGAATACTAAGTTTTActatgaattttttgaaaagt
ttcaaaattaaaaatgaaactttcaatCTTAGAGGGACACCGAAGGTTTT
TaacatttattttttcatctgtATAAATACTGTATTGCCATTTATATACC
TCTCACAATTTAaacgaagcaaaaaaaaaagaagagaaaatttgaatttt
tcccCACTGCTGCGCACGATAGATTTGCATCATATTTCCAATCTCCGTTT
CTTTATTTTAAGGAAGGAGAAGGCAACCAACAAGATGAAACAGGTGATTA
CTAAATTATATCTAAGGCTTTTGTATTATAGGCTAGACCACAGATTTCTG
TTAAGGCCGAAGGGCTAGCTGGCGTGCTTTAAgcttttacaagcaaaaaa
agtgaatatatcgcaaaaaatattgttgctgtTCTCGAAagaaagcttct
gattggtcgagCGCTGAATTTCTATTATAATGTCatgtgacttaggtagg
atttcctaccgaaATACGGCacaattttcagccaaagcacgccatctagc
ccttctggCTTTACAAAAATCTGTGTGCTAGACAGCCTTGGTTATTAAGA
GTCTGGTTGAAAAGGATTAGGGATAAGCtggtgttttttatttaaaaaga
atttcgTACAACTAAGAGGAgtcttttctttttggttttatTATCTGAAT
GATAAAATGTCTGTTCaatataagaaaatatttttgtgcttttttttcaa
aattaatttaataATCTAAATGTTCTTTTCTCTTCTCAGAAGAAAAAGAT
GGCGAATCAAAGGAAAAGGTAACTTTATAAATGTCAAGATGTAACACAAT
CGACCTCAATCTAATTTGCAACTTTGTACCTCTGGGGTTATATATACTAC
ACCCCTTctcatacacccctgtctcagtgccccggtggagctttttccct
cagtggggatgaaaatttctatcgagatcccaatggggatagaaaatctt
ttgtttccaattccagctcaaaaatttcagtggggatggttttggagtgc
agtttttcccattcaatttctaattgggataaaatcatagagcaatttcc
cagtggggttgaaattttagggtattttttccaccgaggacgattttttg
gcctatttttccaccagggcgtggggtccaccgggtctgtgacacatggg
TGTTCTCATAGACCCGCTGGAACCCCTTCCcgctggaaaaattgtccaaa
ttaTCGTCCCCGGATGAAAATTattctctaatttttgtccccactgaaat
taATCAAATAAATTAATCCTGCTAAATCGCTGCTAAATATTATGCAATTT
CTCTATCCCCACTAAGTTTTCTgacttttgaaaacaaaagaattgaaatc
cccagccataaaagatatgggaatatcaatccccatcgagtttcagtccg
tttttttacccccactggcttaaaaaatcctaccgggtctgtgataaGGG
GATGTTATACaggtttttgtttcaaattgaGCTTTGTCACGGCgggaaca
tttttaaaaacactGAGGTGTGCTTTTAATGTTGTCTTTACCGTTCTAAA
CTGTGACACAAAGCatttaaacatttttctttatacGGTGTAGTCTCTTT
AATGCGAATGCCTTTTACTCAATACTTCATGGTCACTTCAGTCAACAATG
CCTCATAAACTTTACTccgtaactcgaaatttccttaactctaACAAATG
TGTGTTCCCTGtatgtgttcgagttatggagactccactgtatcaaAGAT
ATTTTTACAGTCAATTTACAGCTATGTATTAGGTTCAATAAGGTTTCACG
TACTCTTTCAGTGATATAAACATTCCATTTTTAGAATGAATCATCGGAAG
GAGGAAACACGGAGAAGAAGAAGGAAGAGAAAGGCTGTTCAGATGAAGAA
ATCCTCGCCATCCTCGGTCATGAACTTGGTCACTGGAAACTCAATCACAT
CCTCAAAAATCTGGCCATCAGTCAAGTAAGGGATAAATTCATTGAGTTTG
CGGACAAACCGAGCTTCAGAGGGTCTTATTTTGGCCTGGAGAAAAGGCac
ggaaaaaattataattcgATGGGCTAAAAGTTTGGTTCGCCGCCTCAGGT
GCATTCACACACTAATTAATACACCAGGCTTGTTAAGCATTTGCTGGCCT
TGAATCTAGAATTTGCCGGAGTTAATTTTTGATTCGCCAGCCTATCGAAA
ATAAAGCAAAACCTGGTTAAACGAACACTTACGTTGCCCTTCTTTTTGCA
GGTGAATTTGTTGTTATCTTTCTTCGTGTTCGGCTTGCTAATGAACAACA
GCATGCTGTACGAAAGCTTTGGATTTTACAACGAGATGCCGACACTTATC
GGATTGATGATCATCTTTCAATTCGTCTTCTCTCCTTATAATGAGGTAGC
CTTTGTTTTTCCCAAGACACCGTCTGGATTCTACACTTTATTCTAAGGTG
ATATTCTGGGTAAACGACTGCCCTAAAGTCTTAACTTTCTTCTAAACGTT
TCAGTTGAAACAAATATACGAACTAACTACGGTTCGCACGCTTGAATACC
CTTTGTAAACGAGTATAGATGGTGGCAATTGGAATATTTAAGATGGAAAT
AGCGCTAAAGGGGAGCACGATTTTCACGAATAATTCCTAAATTCTTACCG
AAGAAAGCTTATCCTAATAAGAATCAGCCATcaaattttcttagaaattt
tGTACATTAAACAGGCTTTTTATATCCTACTTTGCTGGTATATTTGGTAG
AACAAATCCACCAAGATGAattcttcttcctcttcttttCAGCTGATGGG
ATTTCTGATGACCGTCTTGAGTCGACGATTCGAGTTCCAAGCGGACGAGT
TCGGAAAAAGTCTTGGATATGGTGTCAAATTACAATCTGCTCTCATCAAA
CTTCATAAAGAAAACCTCGGGTTTCCAGCGGCTGATAAATTATACTCTGC
ATATCATTATTCACATCCACCTTTGTTAGAACGCTTGAAAGCTCTTCAAA
CGtccaacaaaaagaaagaatgaaCACGAAGATAAAACTAGATCTTAATG
TTGTATAGAATTATAAACACTTTGTTGGAAATTTGGAATCAGCTTTTTTT
GGAATTAACTTTCTAGAATCTTTAGGATATACtttatgaatttttgtaaa
GAGAATGAAATATTTAACAGAGCGAAATAGAAATTGGTAAATCCGAAAAA
CTCATCAAATGGTATATTCCAATTTATTCGATCTTCGATCAAAGGTTACA
GTCACCTAATTGTCCTATGtttttgggacaagctggagtttttacaagct
cttatgtgatttggttggtcg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005158XLOC_005158Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009186-exon-sc0000091-1491911889:155855..156333TCONS_00009186-exon-sc0000091-1491911889:155855..156333Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1510915933:155855..156333TCONS_00009186-exon-sc0000091-1510915933:155855..156333Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1575043694:155855..156333TCONS_00009186-exon-sc0000091-1575043694:155855..156333Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1491911889:160797..160943TCONS_00009186-exon-sc0000091-1491911889:160797..160943Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1510915933:160797..160943TCONS_00009186-exon-sc0000091-1510915933:160797..160943Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1575043694:160797..160943TCONS_00009186-exon-sc0000091-1575043694:160797..160943Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1491911889:162936..163022TCONS_00009186-exon-sc0000091-1491911889:162936..163022Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1510915933:162936..163022TCONS_00009186-exon-sc0000091-1510915933:162936..163022Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1575043694:162936..163022TCONS_00009186-exon-sc0000091-1575043694:162936..163022Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1491911889:164062..164178TCONS_00009186-exon-sc0000091-1491911889:164062..164178Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1510915933:164062..164178TCONS_00009186-exon-sc0000091-1510915933:164062..164178Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1575043694:164062..164178TCONS_00009186-exon-sc0000091-1575043694:164062..164178Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1491911889:164410..164562TCONS_00009186-exon-sc0000091-1491911889:164410..164562Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1510915933:164410..164562TCONS_00009186-exon-sc0000091-1510915933:164410..164562Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1575043694:164410..164562TCONS_00009186-exon-sc0000091-1575043694:164410..164562Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1491911889:165574..165771TCONS_00009186-exon-sc0000091-1491911889:165574..165771Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1510915933:165574..165771TCONS_00009186-exon-sc0000091-1510915933:165574..165771Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1575043694:165574..165771TCONS_00009186-exon-sc0000091-1575043694:165574..165771Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1491911889:166012..166107TCONS_00009186-exon-sc0000091-1491911889:166012..166107Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1510915933:166012..166107TCONS_00009186-exon-sc0000091-1510915933:166012..166107Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1575043694:166012..166107TCONS_00009186-exon-sc0000091-1575043694:166012..166107Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1491911889:166367..166397TCONS_00009186-exon-sc0000091-1491911889:166367..166397Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1510915933:166367..166397TCONS_00009186-exon-sc0000091-1510915933:166367..166397Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1575043694:166367..166397TCONS_00009186-exon-sc0000091-1575043694:166367..166397Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1491911889:166894..166922TCONS_00009186-exon-sc0000091-1491911889:166894..166922Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1510915933:166894..166922TCONS_00009186-exon-sc0000091-1510915933:166894..166922Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1575043694:166894..166922TCONS_00009186-exon-sc0000091-1575043694:166894..166922Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1491911889:167989..168129TCONS_00009186-exon-sc0000091-1491911889:167989..168129Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1510915933:167989..168129TCONS_00009186-exon-sc0000091-1510915933:167989..168129Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1575043694:167989..168129TCONS_00009186-exon-sc0000091-1575043694:167989..168129Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1491911889:168406..168549TCONS_00009186-exon-sc0000091-1491911889:168406..168549Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1510915933:168406..168549TCONS_00009186-exon-sc0000091-1510915933:168406..168549Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1575043694:168406..168549TCONS_00009186-exon-sc0000091-1575043694:168406..168549Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1491911889:168947..169475TCONS_00009186-exon-sc0000091-1491911889:168947..169475Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1510915933:168947..169475TCONS_00009186-exon-sc0000091-1510915933:168947..169475Clytia hemisphaericaexon
TCONS_00009186-exon-sc0000091-1575043694:168947..169475TCONS_00009186-exon-sc0000091-1575043694:168947..169475Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000091supercontigsc0000091:155855..169475 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.00125001	0.703804	8.91323	5.98541	9.06012	9.23236	0	0	0	1.26727e-08	0	0	0	0	9.27398e-10	0	0.143442	0	0	0	0	0	9.51143	8.30731	2.5834e-08	0	0	0
Blast
[Close]
BLAST of TCONS_00009186 vs. Swiss-Prot (Human)
Match: FACE1 (CAAX prenyl protease 1 homolog OS=Homo sapiens GN=ZMPSTE24 PE=1 SV=2)

HSP 1 Score: 512.686 bits (1319), Expect = 1.143e-174
Identity = 267/477 (55.97%), Postives = 347/477 (72.75%), Query Frame = 3 
Query:  411 IFIATLCFMWIVYIWETYLSFRQYKVYRDTDDVPEELEDYIDEETFEKSRSYQLDKSRFGFIAGLYSQIESTVILWFFCIPLLWKFSGDVNAMIGFDETHEIKRSMLFMVFASIFSTITSLPWSLYSTFVIEEKHGFNKQTLGFFFKDLVKKLVVSXXXXXXXXXXXXXXVKWGGDYFFVYAWLFSLTVSLFIISIYHDYIAPLFDRFITLPEGELRESIEALAKRIEFPLTKIFVVEGSKRSSHSNAYFFGFYKKKVIVLFDTLLKVSPFXXXXXXXXXXXXXXXXXXXXXGNQQDETXXXXXXXXXXXXXXXXXXXXXXXXXXXCSDEEILAILGHELGHWKLNHILKNLAISQVNLLLSFFVFGLLMNNSMLYESFGFYNEMPTLIGLMIIFQFVFSPYNELMGFLMTVLSRRFEFQADEFGKSLGYGVKLQSALIKLHKENLGFPAADKLYSAYHYSHPPLLERLKALQTSNK 1841
            IF A L F W VY+WET+L+ RQ ++Y+ T  VP EL   +D ETFEKSR YQLDKS F F +GLYS+ E T+IL F  IP LW+ SG      GF   +EI +S++F++ A++FS +T LPWSLY+TFVIEEKHGFN+QTLGFF KD +KK VV+  I LP+++ +++I+K GGDYFF+YAWLF+L VSL +++IY DYIAPLFD+F  LPEG+L+E IE +AK I+FPLTK++VVEGSKRSSHSNAYF+GF+K K IVLFDTLL+            +E+   +   E EGN ++                     + K +++GC +EE+LA+LGHELGHWKL H +KN+ ISQ+N  L FF+F +L+    L+ +FGFY+  PTLIGL+IIFQF+FSPYNE++ F +TVLSRRFEFQAD F K LG    L SALIKL+K+NLGFP +D L+S +HYSHPPLLERL+AL+T  +
Sbjct:   19 IFGAVLLFSWTVYLWETFLAQRQRRIYKTTTHVPPELGQIMDSETFEKSRLYQLDKSTFSFWSGLYSETEGTLILLFGGIPYLWRLSGRFCGYAGFGPEYEITQSLVFLLLATLFSALTGLPWSLYNTFVIEEKHGFNQQTLGFFMKDAIKKFVVTQCILLPVSSLLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYADYIAPLFDKFTPLPEGKLKEEIEVMAKSIDFPLTKVYVVEGSKRSSHSNAYFYGFFKNKRIVLFDTLLEE---YSVLNKDIQEDSGMEPRNEEEGNSEE------------------IKAKVKNKKQGCKNEEVLAVLGHELGHWKLGHTVKNIIISQMNSFLCFFLFAVLIGRKELFAAFGFYDSQPTLIGLLIIFQFIFSPYNEVLSFCLTVLSRRFEFQADAFAKKLGKAKDLYSALIKLNKDNLGFPVSDWLFSMWHYSHPPLLERLQALKTMKQ 474
The following BLAST results are available for this feature:
BLAST of TCONS_00009186 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FACE11.143e-17455.97CAAX prenyl protease 1 homolog OS=Homo sapiens GN=... [more]
back to top