TCONS_00009246 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009246
Unique NameTCONS_00009246
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1898

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009246 ID=TCONS_00009246|Name=TCONS_00009246|organism=Clytia hemisphaerica|type=transcript|length=1898bp
CAAATGTGTGTTCAGACTCTCCACGTAACTTTCAGTTCAATTATAATAAT
GCATTGCCCTGCATTAGGTTTATAAAATGTCCGGTCTGctacttttttgg
aaaagatttACATGCCCTACTCTTTTCCATAGAGCTTAACTTATAATACT
AacctaaaaaacgtaaaagaaagtgaaaatgatAACCTGCTGGTTCATTT
TACTGGTATTATACAGTGGCGTTTTTAGGGCGGAGAAGCCACCCAATATT
GTTTTGATGGTTGCTGATGACTTGGGTTGGACAGATGTTGGATTCCATGG
ATCAGATCAAATTCCAACACCGAATATTGATAAATTGGCAAAAGAAGGAA
TTATTTTAAATAATTATTATGTGCAACCAATCTGTTCTCCAACGAGAAGT
GCTCTGATGACTGGAAGATATCCAATTCACACTGGCATGTACCACAATAC
AATTTATGTGGAAGAACCTTGGGGTCTTCCCCTTGAAGAGAAAATCCTGC
CACAATATTTAAAGGATATGGGGTATGCTACACACGCCGTTGGAAAGTGG
CACCTTGGTTACTTTGCCAAAGAATACACACCAACCTATCGAGGATTCGA
TTCATATTACGGATATTATTGCGGTGCGGAAGACTATTTCAACCATGCGA
GATCTGGTGCTGATTTCCCAAGTTTTTATGGATTAGATCTTCATCGGGAT
TACCATGGAATGAGTGAGCCTGACCGATCACAAAAAGGAAATTACAGTAG
CAATCTGTTTGCTTCTGAAGCTATTGACATCATCGAGAAACACCAGGAAG
AACAACCTCTCTTTCTTTATCTACCATTCCAAAACGTTCACGTTCCTTTA
CAAGCGCCCAAAGAAACCATTGATAAATTTTCGTACATTGAGGATAAAAA
TCGAAGAACGTTTGCAGCAATGATGTCCAAACTTGATGATGCCATTGGAC
AGGTTCATCAAGCGTTGGAGGAGAAAGGTATTTTGGATAATACCATCATC
ATCTTTACTTCTGATAATGGTGCCATTTCAACGGAAGGATTTTCAAGCAA
TTATCCTCTGCGAGGTGTAAAACACATGGTGTTCGAAGgtGCAGTCCGAG
TGCCAGCTTTTATCAACAGTCCACTTTTGAAAAGATCAGGTGTTACTTCA
ATGCAAATGATGCATGTTACTGATTGGTTACCAACTATCGTCAACCTTGC
TCAagggaaaatcacaaaagaaattgatggttttgatcaatggaagacat
tgcaagaTGACGTTGAATCACCAAGGAAAGAAATCTTGTTGAATATCGAT
AATGTGGAGTTTCGACAAGAAGGTTTGATTTCTGGAGAATGGAAAATTAT
TATCGACAGTGAGCACGATATTTATGCATCAGACGGTTGGATCAAAGCCC
CAGGATACAATGCCACTGGAAAAGCAAAAACGGTTGTCAAATGTGGTCAT
AAACCTGACAAAACAACACATTGCAATGAAACACATTGTCTGTTCAATCT
ACAAAACGATCCTTGTGAATATAATGATGTTTCAAGTCAATATCCTGAAA
TTTatcaacaaatgaaaaacaaacttGAAGATTACAAAAAGGGAATGGTC
CCTAATCGAAACAAGCCAGGAGATGAAAATGCAGATCCCAAACTACACAA
TGGTGTTTGGGGGCCTTGGATCAAGCTTTGATAACTACTTAAGCTGAATT
TGGTAGAATattgccttttttgaaaaatgtcacgAACACAATTCATTGTT
TTTAGCTTTATACTATTTATCTTGTGATAGAACGTGTCTCAATCTTTTCA
GGTATTTATTGTACTTTTTTGTGGTAAATATCTTGACatcttttttatga
attttcgtATTTAATTTAACgcattgtaaatttttatagGATCTCGAG
Run BLAST on NCBI

transcript from alignment at sc0000091:66473..74700-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009246 ID=TCONS_00009246|Name=TCONS_00009246|organism=Clytia hemisphaerica|type=transcript|length=8228bp|location=Sequence derived from alignment at sc0000091:66473..74700- (Clytia hemisphaerica)
CAAATGTGTGTTCAGACTCTCCACGTAACTTTCAGTTCAATTATAATAAT
GCATTGCCCTGCATTAGGTTTATAAAATGTCCGGTCTGCTACTTTTTTGG
AAAAGATTTACATGCCCTACTCTTTTCCATAGAGCTTAACTTATAATACT
AACCTAAAAAACGTAAAAGAAAGTGAAAATGATAACCTGCTGGTTCATTT
TACTGGTATTATACAGTGGCGTTTTTAGGGCGGAGAAGCCACCCAATATT
GTTTTGATGGTTGCTGATGACTTGGTATGTTCTTTAAAGATCTTTTCATA
AATTATGATTCTTTCTTTTCTTTGAAGATGTACACACTTTAGTTTGTGTT
TTTCATTCGTGTATTTGCTGTAACTGAACACAGCTGTAATTTAAGAATTT
GCCCTAAAGCGACTTTTTCGCCCGAACTTTAAATTGCTGAAAACGAGGAA
TTCCCAATCCAAAATTCCCAATATATTTTGACCAAGATTGTACTTGTTAC
CTATTTTAACGTTATTTTTCAGGGTTGGACAGATGTTGGATTCCATGGAT
CAGATCAAATTCCAACACCGAATATTGATAAATTGGCAAAAGAAGGAATT
ATTTTAAATAATTATTATGTGCAACCAATCTGTTCTCCAACGAGAAGTGC
TCTGATGACTGGAAGATATCCAATTCACACTGGTTAGTTGGTTATACTAA
CAATCAGGACTTTTTACTGGTTTATTGTTGAAATTACTGAGTACATTTAA
GTTAACGCTTACGGATCTGTTTATTTTGTCTGGATAAAGAATTTTTCGTT
TAGAAAATGCCCGTCGAAAAAAAATGCGAAAAGACGATTATTTATGCAAC
ATTGAATTTTTTTCTCTCTATCTTATAGGCATGTACCACAATACAATTTA
TGTGGAAGAACCTTGGGGTCTTCCCCTTGAAGAGAAAATCCTGCCACAAT
ATTTAAAGGATATGGGGTATGCTACACACGCCGTTGGAAAGGTTCGTAAT
TATAATTTTTACCATAGAAAGGTGTAAGAAAATAGATTGGTCCTACATAT
AAANGTTATAATTTTTACCATAGAAAAGTGTAAGAAAATAGATTGGTCCT
ACACGAAAAATATATACAGAATGACCATTAAAATGTTTTTTAAATTATTG
GTCCTACATATAAAACCTTTCATTAACATTATGATCTTGACGGTAAAATC
TTCTCCTTTATTTTCCAGTGGCACCTTGGTTACTTTGCCAAAGAATACAC
ACCAACCTATCGAGGATTCGATTCATATTACGGATATTATTGCGGTGCGG
AAGACTATTTCAACCATGCGAGATCTGGTGCTGATTTCCCAAGTTTTTAT
GGATTAGATCTTCATCGGGATTACCATGGAATGAGTGAGGTAGGTTGTTA
ATATTCAAATCTTTGTCTGTAAAGGGCTGGGAACAAGTCCTGAGGGGGAT
GGGGCACTCAAGGTAAATGACCAATCATATTTATTTTCCAAGTTCCAAAG
TGCACTGTAAGGGTCGAAATCAGCAAAGATGAGAAAAATTGGGGAACAAG
TTAAACTTGGAACTTTACTGCAATTAATTAAAAAGAGTCCGATTACCTTA
TTCCATGTTATATAACATAATTTAACGTTAAATTAAGATCTCCAGCCACT
TGCCTAACTCAGCATTTTTTAACATAAGAAAGAGCAACGTTTCCCAATTT
TTCCCGCGCCGTGTGAGCACAGAGACCATCAAACAATTTCATGACATTTT
TTCTCTTCTACAGCCTGACCGATCACAAAAAGGAAATTACAGTAGCAATC
TGTTTGCTTCTGAAGCTATTGACATCATCGAGAAACACCAGGAAGAACAA
CCTCTCTTTCTTTATCTACCATTCCAAAACGTTCACGTTCCTTTACAAGC
GCCCAAAGAAACCATTGATAAATTTTCGTACATTGAGGATAAAAATCGAA
GAACGTTTGCAGCAATGATGTCCAAACTTGATGATGCCATTGGACAGGTA
TTACTTCTTCGTAAACTTCTTTAAATGCATTAGAACAGTAATAGTCTCTT
AAAGTAGCAGTGTAGTAGTGTAGTGGTTATCGTTCTCGGCTTCTGGCGGG
ACTTTAGGGTTCGATTTCCACTCGGTGAAACGATTCATTTGACATGTTAA
CCATGCAGCTTCGGTTCAACCCATTAATCTTGTAAACTATTCTAAACGTC
TTTCAGAAACTTACAGACTTAACGTTTTTTAGGTTCATCAAGCGTTGGAG
GAGAAAGGTATTTTGGATAATACCATCATCATCTTTACTTCTGATAATGG
TGCCATTTCAACGGAAGGATTTTCAAGCAATTATCCTCTGCGAGGTGTAA
AACACATGGTGTTCGAAGGTAATGTTTTATCAACAACCGGAAGCATTAAA
CGAAATTTCTTTAAGCAACCTACTCATACTATTCTAAAACAATAAAATTT
TAGGTGCAGTCCGAGTGCCAGCTTTTATCAACAGTCCACTTTTGAAAAGA
TCAGGTGTTACTTCAATGCAAATGATGCATGTTACTGATTGGTTACCAAC
TATCGTCAACCTTGCTCAAGGGAAAATCACAAAAGAAATTGATGGTTTTG
ATCAATGGAAGACATTGCAAGATGACGTTGAATCACCAAGGAAAGAAATC
TTGTTGAATATCGATAATGTGGAGTTTCGACAAGAAGGTTTGATTTCTGG
AGAATGGAAAATTATTATCGACAGTGAGCACGATAGTAAGTTATAAAGTT
TTTATCCTGGTCTAGGATCTGATATCTTAATGTACGCCAGTCGTAAAGGG
GGTAATTAAGCGAAAAGAGGTACACGAGTGTGCCACTTGACCTATTTTTC
GTCTCTATCAGTTAGTACCAGGTAGGATCTCACGAAAATTACAAAAGAAA
GACACAACATTGAAAAATTACTTCCTTGTTCAGGTTGCCTTTTTGGATTT
TAGTCCCTTTGAGCTCACTAATTTGAAAATTGATAAAATGAGTCCTTTGT
AGTTTAATTCATTTTACTCATGAGATCAAAAAGTAACGAGGTGAAACCTA
CATCTAATATTTTAACATTCAGTTTATGCATCAGACGGTTGGATCAAAGC
CCCAGGATACAATGCCACTGGAAAAGCAAAAACGGTTATCAAATGTGGTC
ATAAACCTGACAAAACAACACATTGCAACGAGACACATTGTCTGTTCAAT
CTACATAACGATCCTTGTGAATATAATGATGTTTCAAGTCAATATCCTGA
AATTTATCAACAAATGAAAAAAAAACTTGAAGATTATAAAAAGGGAATGG
TCCCTAATCGAAACAAGCCAGGAGATAAAATGGCAGATCCCAAACTACAC
AGTGGTGTTTGGGGACCTTGGATTAAGCTTTGATAGCTACTTAAGCTGAA
TTTGGTAGAATGTTGCCTTTTTTGAATGGAATGTCACAAAGGCATTAATT
GCTTTAAGCTTTATACTGTACTCATTTATTTTGTGCTAGAACGTTGTCAA
GTATTCTTTGAAGCTATATGGCCAATCCAATCCTTGTAGGGTTTAGATTG
TAAACTTTTACTATTATTTATTGTCATAATCTTTTTAGGTAGTTAATGTA
CTTTTTTGTGGTAGATATCTTAACACCTTTTTTATGAATTTTCGTATTTA
ATTTAACGCATTGTAAATTTTTATAGGATCTCGAGCAAAACACTTTTCAT
TAAACAGTTTAATTTTAATATGAATGTCTGTTGTTACCTCGATTTGGCTA
ATGTAGAGAAACTCCCTAATTCGTTCTCTGTTTCATTTGACTGTTGAATA
TAACTTGATTCTTTTTGTTTATCACAGATCTATAAAAGAATAAAACAAAT
GTAATGTACGCAATCTTGAATATTTTAAACTGAACGATGGACAAGTTCAA
CGACCTTGTATTTTTCACCATCGTTTGTCTTGGATATGCTTTGGTGAAAA
GCGAGCAGCCACCAAATGTGGTTTTCATTGTGGCTGATGATTTGGTAAGA
CGTTTGTCTTCAATATTTTCTCATTTTCCCTTCAATGCAAACTCAGAAGA
TGTGATTGTCATTATGTAACCTAAGGGCGGCTTAAGCAATTTTGGTTTAA
AATTTTGAAATCGATGAAATACCGGGTGCACCACAAAAAAGTTTCTCTCT
TTAAAGTGAATTTTTTTTAGTTTAAAAAATTTTGAAAGAATTAATTTTTT
TTCATTGGAAATAAGAAAAATTAACTTGAATTTTGATGGGTNTTTTTGAA
AGAATTAATTTTTTTTCATTGGAAATCGACCTATCAAATTAATTAGAAGC
ATAATTACTTAACACGTCAGTATTTTCGTTTCAAGTATTAAAAATGATAA
TTAGCTGTGATAATGACATTTCGTTGTATAAAGGTAAGAGTTGAATATCA
ATAAAAGGAAGAAAATTCGTCGGAAAATGCCAAAAAATATGGTAAGATTC
GTGAAAATACATCAAATATTAGGTTTTGAAGTAAATCCTGCCTAACATTG
ACTTTACCTAGTCTAGAAGCAGAGATCTGAGGAAAAGTTCGGTAAAAGTA
AATCATAATGACTGAGATGACGATTCCAAGCCCTTTCGAGGCTTCAGCTT
CAAAATTGATGGGTTTGATCACTTAATATTGCTCTTAATCATGTAAAAAC
TATTGCGATTGCCAATTTTGAAATAAAAATTTGATAGGTCAATTTTCAAC
GTTTTCGAGCACTTTCTGAAAGTATAATTTTCGATCTAATGAACCGAATT
TAATAAATGACCCCTCAAAATTTAAGTTTATCTTTCTTCTTTCCANATAA
CTTTTTTATTCAATTGAGCATAAATCTCGATCTAAAGAACCGAATTTAAT
AAATGACCCCTCAAAATTTAAGTTTATCTTTCTTCTTTCCAATAAAAAAG
GAATGGTTCTTTTAAAGTTTTTAGACCTTGAGAAAATTAACTTTAAAGAG
AGAAACTTCTTTGTGACGCACCCGGTGTCTGAGTTGTTTTTCCAATATTG
TACTATCAGGGTTGGACAGATGTTGGCTTCCATGGGTCAGATCAAATCCC
AACACCGAATATTGATAAATTGGCAAAAGAAGGAATTATTTTGAATAATT
ATTATGTGCAACCAATCTGTTCTCCAACAAGAAGTGCTCTGATGACTGGA
AGATATCCTATTCACACTGGTTGGTTTAAACCTTATCATTTAAAGTATCA
ATCAGTAAATTTTGACTCAGACTCGACTGCTAAATTTGTATTTATTCACT
TAAACTAAAGAGGGCTTTAAAACCATTGACATTTTAAAAATCTGACGCTA
AATTTGTTTTAAATTTTTTCTTAGTATTTTGGCATAGTGGTCTTACAAAG
TTGTACTTCTGGAAAGGTGAGGTATGTATTCTTTAAAAAGATGACTAATC
GACTAATAGGTTTATAGCTTGGAAAGAAACCTTTCACGATTCACTTATTT
TTTAAGGAATGTTTCATGGAGTCATTTGTCCAGAGGAGCCCTATGGTGTA
TCTTTAGAAGAAAAAATTCTCCCAGAATATCTACGAGAATTGGGGTATGC
TACCCATGCCATCGGGAAGGTTTGTATCTCTTTAACTTTTGTCATTGTAG
TTCAGTAATTCTCCATTGATCCTACTCCCATCTTACTCCAAAAATATCTT
TGGCATCTTTACCAAAGCCTTTAAAAATTTTTAAAAATCTTTTATTTAGT
GGCACCTTGGCTACTTTGCCAAAGAATACACACCGNTTCCGAAAGAATCT
TTTATATCTTTTACCAAAGCCTTCAAAATTATTACTTTTTATTTAGTGGC
ACCTTGGATACTTTGCTAAAGAATACACCCCAACATACAGAGGATTCGAT
ACATTTTACGGATACTACAATGGAGCTGAGGATTATTTTTACCACAACAG
ATCTGGCTATCATTTTCCAAAATTTCATGGTCTTGATCTTCACCATGACG
TAGAAGGAGATCAACAGGTATTCGCTCAATAACCAATAACCATCAGATAG
TGACGAGTTCTTGAAAATTGTTGAAGGAGGCAAAAATCATCAGTCAAAAT
TAATTAAACCTAACGCTTGAGTTACCAGTGCCATAAATGTAATGTCGAAA
TAACTTTCAACAATTTTTGTCATACAGCCCTGATAAATACTAACTCAATC
TCGCTTCAAATAGCTTTTGACCAGATTATTTCATGGCGTATTTAACATTT
TAGCGTAATTCTCCAACTCTAGTTTCATTTTTCATTTTGCCGGTCTATTA
TTTAGCCAGTGCGAACACAGGACGGTAATTACAGCACCTACATGTATTCG
GATGAAGCAATCACTACAATCAACCAACATCCAACAGAAAGACCTCTTTT
CCTGTACCTTCCTTTCCAAAATGTCCATGGCCCTCTGATGGCACCTCAAG
AAACTATTGATAAATTTTCATACATCGAAGATAAAAAAAGAAGAGTGTTA
GCTGCAATGGTATCACAATTAGATGATGCTATCGGTCGAGTAAGTCGAAA
CTTTTTTTCAAATTTCCAAATGATATGAAACGAATTTTGGGAATCATATT
GCGTTCATTGTAAATGTGTTTTGATATTTTTGCCTGGTTTGGCATGATCA
AAAACTTTTCAGTTTTTCATTCAACATTTCATCCAACATTTGAACAAAAT
GTTGGATGAAATGTTGGAGTGGTGTGCTCCGGCCTTTAGTCGCCTATATA
ATACAACATTCCAGTAAAAGCTCTTAAATTCAAGCTTTAAACAAGTATGT
ATGTTACATTATTTTCTAGATAAACGGTGCGTTGGAAGCCAAGGGCATTC
TAGAAAACACAGTGATCATTTTCACTTCAGATAACGGTGCACCCTCAGGA
CAAGGGATGGGAAGTAACTATCCCCTTAGGGGTGAAAAATTCATGGTCTT
TGAAGGTATTCAAAAAATTCTTCATTATTTTAGTCTCCACCTTTATATGT
CCAATCCAACATATAGTACCTGCTAATTATGGTACCTTTTTGTCTTTTTA
TACAGATTTATGATTTAACATTTTCGTTTATTTATGGAAAATTTCTAAAG
GTGGTGTTCGAGTGCCAGCGTTTATCAACAGTCCACTTTTGAAAAGATCA
GGTGTTACTTCAATGCAAATGATGCATGTTACTGATTGGTTACCAACTAT
TGTCAACCTTGCTCAAGGGGAAATCACAAAAGAAATTGATGGTTTGGATC
AATGGAAGACATTGCAAAGTGATGTTGAATCGCCAAGGAAAGAAATCTTG
TTGAATATCGATAATGTGGAGTTTCGACAAGAAGGTTTGATTTCTGGAGA
ATGGAAAATTATTATCGACAGTGAACATGACAGTAAGCTATTACTTTTTT
ATCCTAGCCCTGGATATAAATACTTTTAATGTTGGTCCTGGATTTAGATA
CTTTTTTGATGTTTTAAATGTACGCAAGTCGGGAAAGGGATAATTAAGCA
AAAAGAGGTACATGAATGTGCTACTTGGCCTACCTTCCGTCTCTACCAGT
TAGTACCAGGTAGGATTTCACGAAAATCGCAAAAAAGTGAAAAATCAGTT
CCTCGTTCGGTTGTCTTTTTGGGATTTTAGTCCCTTTGAGCTCACTAATC
TGAAAATTGATAAAATAGACCCTTCGTAGTTTAATTCATTTTATTCATGT
GATAAAAAAGTAACGAGGGAGATACTTACATCTAATATTATATTATTTAG
TTTATGCATCAGACGGTTGGATCAAAGCCCCAGGATACAATGCCACTGGA
AAAGCAAAAACGGTTGTCAAATGTGGTCATAAACCTGACAAAACAACACA
TTGCAATGAAACACATTGTCTGTTCAATCTACAAAACGATCCTTGTGAAT
ATAATGATGTTTCAAGTCAATATCCTGAAATTTATCAACAAATGAAAAAC
AAACTTGAAGATTACAAAAAGGGAATGGTCCCTAATCGAAACAAGCCAGG
AGATGAAAATGCAGATCCCAAACTACACAATGGTGTTTGGGGGCCTTGGA
TCAAGCTTTGATAACTACTTAAGCTGAATTTGGTAGAATATTGCCTTTTT
TGAAAAATGTCACGAACACAATTCATTGTTTTTAGCTTTATACTATTTAT
CTTGTGATAGAACGTGTCTCAATCTTTTCAGGTATTTATTGTACTTTTTT
GTGGTAAATATCTTGACATCTTTTTTATGAATTTTCGTATTTAATTTAAC
GCATTGTAAATTTTTATAGGATCTCGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005177XLOC_005177Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009246-exon-sc0000091-1575043694:74427..74700TCONS_00009246-exon-sc0000091-1575043694:74427..74700Clytia hemisphaericaexon
TCONS_00009246-exon-sc0000091-1575043694:74019..74178TCONS_00009246-exon-sc0000091-1575043694:74019..74178Clytia hemisphaericaexon
TCONS_00009246-exon-sc0000091-1575043694:73710..73822TCONS_00009246-exon-sc0000091-1575043694:73710..73822Clytia hemisphaericaexon
TCONS_00009246-exon-sc0000091-1575043694:73312..73482TCONS_00009246-exon-sc0000091-1575043694:73312..73482Clytia hemisphaericaexon
TCONS_00009246-exon-sc0000091-1575043694:72704..72937TCONS_00009246-exon-sc0000091-1575043694:72704..72937Clytia hemisphaericaexon
TCONS_00009246-exon-sc0000091-1575043694:72333..72468TCONS_00009246-exon-sc0000091-1575043694:72333..72468Clytia hemisphaericaexon
TCONS_00009246-exon-sc0000091-1575043694:71966..72247TCONS_00009246-exon-sc0000091-1575043694:71966..72247Clytia hemisphaericaexon
TCONS_00009246-exon-sc0000091-1575043694:66473..67000TCONS_00009246-exon-sc0000091-1575043694:66473..67000Clytia hemisphaericaexon
TCONS_00009246-exon-sc0000091-1510915933:74427..74700TCONS_00009246-exon-sc0000091-1510915933:74427..74700Clytia hemisphaericaexon
TCONS_00009246-exon-sc0000091-1510915933:74019..74178TCONS_00009246-exon-sc0000091-1510915933:74019..74178Clytia hemisphaericaexon
TCONS_00009246-exon-sc0000091-1510915933:73710..73822TCONS_00009246-exon-sc0000091-1510915933:73710..73822Clytia hemisphaericaexon
TCONS_00009246-exon-sc0000091-1510915933:73312..73482TCONS_00009246-exon-sc0000091-1510915933:73312..73482Clytia hemisphaericaexon
TCONS_00009246-exon-sc0000091-1510915933:72704..72937TCONS_00009246-exon-sc0000091-1510915933:72704..72937Clytia hemisphaericaexon
TCONS_00009246-exon-sc0000091-1510915933:72333..72468TCONS_00009246-exon-sc0000091-1510915933:72333..72468Clytia hemisphaericaexon
TCONS_00009246-exon-sc0000091-1510915933:71966..72247TCONS_00009246-exon-sc0000091-1510915933:71966..72247Clytia hemisphaericaexon
TCONS_00009246-exon-sc0000091-1510915933:66473..67000TCONS_00009246-exon-sc0000091-1510915933:66473..67000Clytia hemisphaericaexon
TCONS_00009246-exon-sc0000091-1491911889:74427..74700TCONS_00009246-exon-sc0000091-1491911889:74427..74700Clytia hemisphaericaexon
TCONS_00009246-exon-sc0000091-1491911889:74019..74178TCONS_00009246-exon-sc0000091-1491911889:74019..74178Clytia hemisphaericaexon
TCONS_00009246-exon-sc0000091-1491911889:73710..73822TCONS_00009246-exon-sc0000091-1491911889:73710..73822Clytia hemisphaericaexon
TCONS_00009246-exon-sc0000091-1491911889:73312..73482TCONS_00009246-exon-sc0000091-1491911889:73312..73482Clytia hemisphaericaexon
TCONS_00009246-exon-sc0000091-1491911889:72704..72937TCONS_00009246-exon-sc0000091-1491911889:72704..72937Clytia hemisphaericaexon
TCONS_00009246-exon-sc0000091-1491911889:72333..72468TCONS_00009246-exon-sc0000091-1491911889:72333..72468Clytia hemisphaericaexon
TCONS_00009246-exon-sc0000091-1491911889:71966..72247TCONS_00009246-exon-sc0000091-1491911889:71966..72247Clytia hemisphaericaexon
TCONS_00009246-exon-sc0000091-1491911889:66473..67000TCONS_00009246-exon-sc0000091-1491911889:66473..67000Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000091supercontigsc0000091:66473..74700 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.671524	1.97093e-09	8.29987e-07	0.152562	0	0	0	0	0	0	0.389827	0.0055547	0	0	0.000108278	0.2426	1.50491	0.875303	0.246248	1.82648	3.03204	4.58518	4.04107	2.74044	0	0	1.74652	1.06063	0.658524	1.67832
Blast
[Close]
BLAST of TCONS_00009246 vs. Swiss-Prot (Human)
Match: ARSB (Arylsulfatase B OS=Homo sapiens GN=ARSB PE=1 SV=1)

HSP 1 Score: 395.201 bits (1014), Expect = 2.485e-129
Identity = 214/503 (42.54%), Postives = 304/503 (60.44%), Query Frame = 2 
Query:  230 AEKPPNIVLMVADDLGWTDVGFHGSDQIPTPNIDKLAKEGIILNNYYVQPICSPTRSALMTGRYPIHTGMYHNTIYVEEPWGLPLEEKILPQYLKDMGYATHAVGKWHLGYFAKEYTPTYRGFDSYYGYYCGAEDYFNHARSGADFPSFYGLDLHR---DYHGMSEPDRSQKGNYSSNLFASEAIDIIEKHQEEQPLFLYLPFQNVHVPLQAPKETIDKFSYIEDKNRRTFAAMMSKLDDAIGQVHQALEEKGILDNTIIIFTSDNGAISTEGFSSNYPLRGVKHMVFEGAVRVPAFINSPLLKRSGVTSMQMMHVTDWLPTIVNLAQGKI--TKEIDGFDQWKTLQDDVESPRKEILLNID------------NVEFRQEGLISGEWKIIIDSEHDIYASDGWIKAPGYNATG-----KAKTVVKCGHKPDKTTHCNETHCLFNLQNDPCEYNDVSSQYPEIYQQMKNKLEDYKKGMVPNRNKPGDENADPKLHNGVWGPWI 1672
            A +PP++V ++ADDLGW DVGFHGS +I TP++D LA  G++L+NYY QP+C+P+RS L+TGRY I TG+ H  I+  +P  +PL+EK+LPQ LK+ GY TH VGKWHLG + KE  PT RGFD+Y+GY  G+EDY++H R          L++ R   D+    E     K  YS+N+F   AI +I  H  E+PLFLYL  Q+VH PLQ P+E +  + +I+DKNR  +A M+S +D+A+G V  AL+  G+ +NT+ IF++DNG  +  G  +N+PLRG K  ++EG VR   F+ SPLLK+ GV + +++H++DWLPT+V LA+G    TK +DGFD WKT+ +   SPR E+L NID            ++   ++     E+     S H       W    GY   G      ++  V      D  T   +T  LF++  DP E +D+S +YP I  ++ ++L+ Y K  VP      D   DPK   GVWGPW+
Sbjct:   41 ASRPPHLVFLLADDLGWNDVGFHGS-RIRTPHLDALAAGGVLLDNYYTQPLCTPSRSQLLTGRYQIRTGLQHQIIWPCQPSCVPLDEKLLPQLLKEAGYTTHMVGKWHLGMYRKECLPTRRGFDTYFGYLLGSEDYYSHERCTL----IDALNVTRCALDFRDGEEVATGYKNMYSTNIFTKRAIALITNHPPEKPLFLYLALQSVHEPLQVPEEYLKPYDFIQDKNRHHYAGMVSLMDEAVGNVTAALKSSGLWNNTVFIFSTDNGGQTLAG-GNNWPLRGRKWSLWEGGVRGVGFVASPLLKQKGVKNRELIHISDWLPTLVKLARGHTNGTKPLDGFDVWKTISEGSPSPRIELLHNIDPNFVDSSPCPRNSMAPAKDDSSLPEYSAFNTSVHAAIRHGNWKLLTGYPGCGYWFPPPSQYNVSEIPSSDPPT---KTLWLFDIDRDPEERHDLSREYPHIVTKLLSRLQFYHKHSVPVYFPAQDPRCDPKA-TGVWGPWM 533
The following BLAST results are available for this feature:
BLAST of TCONS_00009246 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARSB2.485e-12942.54Arylsulfatase B OS=Homo sapiens GN=ARSB PE=1 SV=1[more]
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