TCONS_00009250 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009250
Unique NameTCONS_00009250
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2063

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009250 ID=TCONS_00009250|Name=TCONS_00009250|organism=Clytia hemisphaerica|type=transcript|length=2063bp
TTATCGGACACAAGCGCTGATCGAATTTCAACTCTGTCTAATGTGTCTTC
AGAAGGTGATACATTAGATTCTGTTGAGCAATCATTCCTGGATGGAGATG
TTGAGCCTGTCAACGACCCACCAATGATCAGAATCCGAAATGCCATCCAA
GAGATTGAGGAGAGAAGAACAGCTAAACTTCAACACATGCGTGTTATTGG
AAATGTCACTTATAAGAAAGCCAACTTCGCCTCTGAACTTGTCCATAATG
TACGCAAAGTTAACTTCAAATGGCAGCTGGGAAATAAGATTGGTGAAGGT
CAATTTGGGAAAGTGTATTCAGCCGTCAACCTTGATACTGGTGATTTGAT
GGCCGTCAAACAGGTGCGTTTCAACCCTCACGACTACGGGACAGTTCAAG
AGATAGCAGACGAAATCACAAACATTCAAGGCTTACTGCACGATTCTCTC
GTCAAatattttggtgttgaaattcACAAAAACGAAATGTTGATTTTCAT
GGAATATTGTGCTGATGGTACCATAGCTGAAGTAGCCAAAGTTGGTTTGC
CAGAATCTTTGATTCGTGTGTATACATACCAAATCATCAAAGCCATCAAT
TTCCTTCATCAGTCTGGTGTTGTCCATCGAGATATTAAAGGTGCCAACAT
TTTTCTATCATCAAGTGGTTTGATCAAGATCGGAGATTTCGGATCAGCAG
TTAAACTGAAAGATCCGATGTGTACTACCCAAGGAGAAGTTTTCAACACT
CGTGGAACTGCCGCTTTTATGGCACCTGAGGTCATCACTTTAGACAAAGG
GCGTGGTTATGGTCGAGCAGCTGATATCTGGAGTTTAGGTTGTGTTGTGA
TCGAAATGAGCACAGGGAAACAACCATGGTACGAATGTGACAACATATAC
GCCATCATGTATCGCGTTGGTGATGGGAACCACCCTCCAATACCTGACCG
CCTTAGTGAAGAAGGGCGGGATTTCTTGGAGTGTTGTTTTATTCATGATC
AGAACTACCGGTGGACAGCCAACATGTTAGAAGATCACGCCTTTGTGAAG
GTTAAGAAATGAATAGCCATGAGAGTGACCTTTCTAGAACATACCTTCCT
ATCCATTCGCTTGTATTGCAAGAGGAACTCGAGAATGAGCATCCAGTATA
TTGGAGACATCAAGAGAGCGCGTGGATATTGAATTCTGATAACTcttaaa
aagaaataattcagTGAGATTTGCTATATAAGTTATTATGTTGAGTGTTT
GTAGAGAAGTGGTATGTCCTTAATGACTGGATTTCTCTGCTGGAAAGATT
TATAAATGTGATTTTGACGAAATGAATAAACGAATGGATAGGAGTAAATG
CGTCATGCAATACTTTCATATtaaagaatgaatgaatgaatgaatgaatg
ataaATCACTTATAGATAAATTTTAAACTCCTAATGATCATTTgctgtta
atattttttgattaattttattgtattgataatttttttatctaaaatcc
TTCGatcaagattttgattttggctaCCATTAAGATATCATACAGATTTA
CGAAATTTTAATCACACAAGAGTTTTGTTTAAATTAGCTTTTTTTCATTC
CTGTACAATACACCCTTAGATTATTTTTATATTNGCAGTTTTGTTTAAAT
TTGCTTTTTTTCATTCCTGTACAATACACCCTTagattatttttatatta
tgctGTGTATAGTGTAGTTATAATTGTAGATAGGGTATTAAAATAGTGTA
TTTTTATACTCATAAACCTCTCActcttttcttttcttacaagccattat
ttctttttattgtatgtttttatcttcttctttttcatatttatcACTAT
TTATTCTATTTCTTCGACACTTTTAAAGCGTTTCTTTTAGACCGCGTTTC
ATCACCATCAGTGCGCCTTGTGCGCATTGAGAGAAATTTGAGCATAGCTC
CTTCGCTTCTATATTTTCTCGATGAACCAGATCTTGTTCGAATGAACGAG
ACCAAATTCATAATTCATTATTAAGAAAACTATTAGTGGTCTTGATGGTA
CAGGAATAAGTCG
Run BLAST on NCBI

transcript from alignment at sc0000091:82286..91166-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009250 ID=TCONS_00009250|Name=TCONS_00009250|organism=Clytia hemisphaerica|type=transcript|length=8881bp|location=Sequence derived from alignment at sc0000091:82286..91166- (Clytia hemisphaerica)
TTATCGGACACAAGCGCTGATCGAATTTCAACTCTGTCTAATGTGTCTTC
AGGTGATTTCCCCTTCCCAATTTCAAAAAGAGCCATTATTGAGCCTTTAT
TTTCTCTCTCAGAAGCTATCTTACTTTCAACGATGTTTAGTATGCATACT
GGACTGTTTTGCTTTGGTTTTAAGAATTTTCATTTAAAGTGAATCATGTA
ATAAAGTTATATACTGCAAACACCAGGAAATGCAAAATCAGGACCACTAA
AGTACTTAAAAAATTTTTTTAAATATCTTACGAGAGGCATAATTTCCTTA
TCTTATAGAAGGTGATACATTAGATTCTGTTGAGCAATCATTCCTGGATG
GAGATGTTGAGCCTGTCAACGACCCACCAATGATCAGAATCCGAAATGCC
ATCCAAGAGATTGAGGAGAGAAGAACAGCTAAACTTCAACACATGCGTGT
TATTGGAAATGTCACTTATAAGAAAGCCAACTTCGCCTCTGAACTTGTCC
ATAATGTACGCAAAGTTAACTTCAAATGGCAGCTGGGAAATAAGATTGGT
AAGTTGAATAATTACTTGTCTACTTGTCGATTAACATACTTTTTTAAATG
TTTACGATAGCTAGTTTATGTATTTGCACTGAAGTGGCTTGGAATAACCC
GCAGTTTTGACCCGCAAAATCGAGTACGATAAATGTGCTGATTTACAGTC
GTCTTCAGTCAGGGGGGTCGGTAGTAAAATCTCAGACATATATGAGTAGT
AAAAGGATTTTTACGAGTTTTTACATACCACCACGCAGACTCTTGGAAGA
GGTGTTTTTCTACCCTGGTAGTAAAAGTTTTTGAGACAATTTGTCATAAA
GACCACCTATTTTTTGGTTGCTTTTCGGACTGATTTTACAAAAAAAGCTA
AAAAATGAATATTTCTGTGACACATTTTTCACTTTGTGCAAAAATTAATG
TTTTGCCTTTAATATTAAAGACTTTTTTTATATTGATAAAAAATCTCGAG
AATTTTTTGTTTGCAACAAACAACTTTCCAACAGAAAATTTTTTCAAGTT
GTAAAAATTTTCAGATTTTTTCAGAAAAGTCATCCCAAAAATTAAAAGAA
TTACAGAAATAGCTAAAATTTGCTAATTTTACCAGTTTTAACTACCCAGG
TAGTAAAATTTTTTCAACATTTAACACATAGATACCACCCNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCTGCTTCAG
TTGATCAGGATCTAGACAAAATCAGAAGCTAACCGTCGCCGTCGTAATTT
AACACGCATACATATAAACTCGCTAATATCTCATGGTGGTTTGAATGACT
TTTTTGGAGCATCCTTGCACCATCTCTTTCATGGTCAAATAGGCTTCTTT
TGGCTTGCCCAAGAAACCTAAATGACCACTTGATCTTTTACTATGTAGCG
GCTCCAATATAATAAGTTGTAATTCAAGTCGATTTTCAATATAAATGGTT
GCATAAATTAGATCAATTCCAGAAAAGATATTGATACGAGGTCAATAAAA
AAGTCTCTTTTAAAAGTGCAAACTTGTAATGACTTGCAACCAAAATATAA
ACCTATCCTTATCCCATCGATTTTTCAGGTGAAGGTCAATTTGGGAAAGT
GTATTCAGCCGTCAACCTTGATACTGGTGATTTGATGGCCGTCAAACAGG
TTCCTTATCGCTTATTCATCTTTTATTATCTAACTTCATTCAAATACACG
TTTTTAATAAGAACATGTGAAATCTTTGAAACCTTCGGTTGAGTTTTAAA
GCTTAAAGAAGTTTCTTAAAATGTTCTTTGATTTACCCATGTTGTCAGTA
TTTTCGTGCAATTTTTTGAGAAATTTTGTGTTTCAGAGTCCATAAAAGCG
TTATAATGATCTTAACTTGTTCTTAATAATTTGATCTTCTTTAATAGTTT
TCTCTCATCAGATTTAAAAGGAGTAAGATGAAGAATTACAGATTTTCCAC
AATTAAATGTGACTGCTTCATCACTTCTCTAGGTGCGTTTCAACCCTCAC
GACTACGGGACAGTTCAAGAGATAGCAGACGAAATCACAAACATTCAAGG
CTTACTGCACGATTCTCTCGTCAAATATTTTGGTGTTGAAATTCACAAAG
TAAGGAAAAGCTATTAACCTGTCCTTTATCTGTCAACTCAACGGATTAGA
ATAGGTGGATTAAGAACTCATAGAAAACACTCCTCGTTAGGTTATCAAAC
TTTTTTACGAGTTTGCTAGCAATTAAAACTTGATAAGTTGTANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAA
AATCATTACTTTCAACATTTTCATTGGTCATTACGTATCACGTGGTACAT
TTTAAATAAGAAAATGCACTTTTTTAGCCCTTTCTATCCAATGCAGAAAT
CAGCCAAATAATTTGAAATTTATTTTCCTAATTCTAAATACAGTCTTCTT
TCACCAGTATGCAACCCATTCGTGACCCATCGATAGTTTCTTAGTTACAG
ACCATACGTTAATTTTCACTTATCTGAAGATTGCCATGGACAAAAGATTA
AAAATTTACATTAAAACGGGTCTAGCGTTTGTTGATGCTAAAACTTAAGT
GCAGGATTTAAAATATTTGCAAAATCATCAAAATTGATCGAATCATAGGA
CAAATTCGTTTTCGAAACTGTATAAATTGGAAAATTGTTCTTATAAAACA
ATGAAAAAACTGTGCGTAGAGTCATTTACAGATTTTTCTTGTAACAATGA
GAAGACAATGGATCTCTCTTGGGAGCAACGAGAGAAGTTAATCCACCTAT
TATAATCCGTTGGTCAACTCATCTTTGCGTTTGTCATAGCTAAAAAACCT
GGCTACAAAATGCCGTTAATCGAATCCAATCTTTTTGATTTTTATGATGA
CGAAGGCTTTACCAATGAGTTTGGTCGCCAGGGGAGACCTAGCACAGATT
TTTCTGTGCTTGTATTTCGATTGGTTTAGAAATCTCGAGAAAGCAATTAT
TTTAAGAGTGGTGACTTTTAGAAGTATTAATACACGCTTTTTTTTGTTAT
AAGAATACACTTTATAAAAATGTCCATGATGAAAATGGCCAAAAAATTAA
TCACCAATCATGGAATTTTGAATGCTAGTGCTAAACTAAAATTGCCATTT
TAGAGCATTTTCGATTATAAATTGTCAATTACCCCCAAGACGCCAATTAA
GGCTCACTTCTTTCACAAAAATGCCATTTTATGCTTGAGACGTATGTACT
AAATGTTAAATCTAGTCTGAATTAGGATCCTAACCTATGAATGCTGTAAG
AATATTTTAGGATGATTTTCCCAAAATAGTTAAGAATATCCATGATGAAA
TGGATTTACACCATTCTTATAAAAAAAGCGTGTAAGGATTTAGCTAGATT
ATAATTGTGTAATTTTTAATAACATTATTGCTATTGGAAGGAGTGTGAAG
GTGTAATCTGGCTCTCTCGCCAACAGTAAAACAGAAAAGAGTCAGAATCA
GATTATTTGGCTACGTTTAGTAAAGAAAGGATACTCCATAATAACCCCTC
AAACTTTTGATACTAAAATAACCAAATCAATATCTTTAAATCATTTTATC
TTAGAACGAAATGTTGATTTTCATGGAATATTGTGCTGATGGTACCATAG
CTGAAGTAGCCAAAGTTGGTTTGCCAGAATCTTTGATTCGTGTGTATACA
TACCAAATCATCAAAGCCATCAATTTCCTTCATCAGTCTGGTGTTGTCCA
TCGAGATATTAAAGGTTATTTATTAAAAACTTTGCATCATTATCAATAAA
AATTTATCAAAGATATCACTCAAAGAATCCTCTTCGGTCACAGAACTGAA
AAATAACCTTACTCGAAGTTTTCGTGTCTATGATTATACGAAGCAACTTT
TATTGAAAAGATGTAATTAATTATTTCCTATCTATATAGGAAATATTTGT
TAAAACGGTAATTTTTCTTCTTCTCCTTCTTCTCCAATTCTAACGCTCGG
TTTTGGTCAATTTCGTGAGTTTGTACATGAGTCTCTTTTTAAATCAAGCT
CCTGCGGTAAAAACAGTAGGATGTTCTTTTTTCGAGGCGGAAGACGTCAT
TTCTTCGAGAAACATCTGTGATAAATATCCGTACAGCACTCTATTCTCCT
TGTCGATCGGGCAACGTCCGCCGTTTCAGAAGTATATTGTTGATCGGACC
ATACTGCTTTGTTCTAACTGTCAAAACAAAGATGGCAGAAAATAGACAAC
AACTTCTGCTCTTTCGCTGGTTTATATGCTTTGATGAGTTGAATTGGATC
GTGATTTTTGTACGATTGTCACAAGGAATGGTCGATAGTGAACTTTTCTT
AATATTCCTTTCTGGATTTGATGTTTCGTTTACATTCTGTTGGTTTGGCT
GGATTGAGAGAAGATACAATCTCTTGGTCTTGGAAAAACAGGACATTTTA
TAAACTTTCACACAAACTAACTTCAATTTTGTTTGTATATTTACATAAAT
CGTACGAAGGCAAGTGACTGTGAATAAATCTGACCATGTTATACCTGAAA
AATTACATATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNAAGTATGTGACATTTTTTGCTCTTGCAGCATGCTTTTGG
AAATCATAAAATGGCTTCTGTTAAGGGAATTTTTTCCTATCGACATTCTC
TCAGATTATGAAATGTTTCCCAGTATATAAAAATGAGATTTTTTCTTTTT
TTGCATTCTGTCGGAAAAAATGAAATTGTTTCCCGGTTTTAAAAGATTTT
TACTTTTAGCACGTACTGTACATTATTTCAAAAAACTCAAAACGTTACTT
TAAATTTTTACATTTTTGACAATATTTTATATATGAAAAAAGTATAATGT
AAAATATTTCATCTCATTTTGAAAATATATAAAATTCTCTTTGGTTTTCT
TACTGTGAAATATTCTCCTTTTTGTCATTCTTTCATTTTAAATATTTGCC
CTTTTTGGCTATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCGACGCCGGGTGAC
CGCTAGTATAATACTAAAATCCATTTAAAGTCCACCTAACGAAAATTAAA
GTTCCAGCCAATTTGATTACTGCATCGTTGTTCTCAGTCGGGTTCAGCTT
GATTATATTCCGTGATCCGTAGCTTTGAACCTACAGTCACCTTATGAATA
ATCCTGTAAACACTGGCAATAACATAAATGAAATTTTGAAATTCTTAGGG
ACTTGTGTTGCTTGATGTTATCTTAGATTCAAAGCACTTTGAAATTTTTT
GAGGACATCAATTATTATTTTAACATTTGTAAAGGAAATATTTATCCGCA
TCTTTGCGGCTCTTGTTTGCTATAAGCATCCTTTTTGGTCATATAACTGA
AAAGATCTCTTACTCGAAGTTTTCGTGACTTTTGAGTAAAAGACTTTGCT
TGGAAAACAAAACCACTGTATTCAATCTGTCTTTCTCATCCTGTAGGTGC
CAACATTTTTCTATCATCAAGTGGTTTGATCAAGATCGGAGATTTCGGAT
CAGCAGTTAAACTGAAAGATCCGATGTGTACTACCCAAGGAGAAGTTTTC
AACACTCGTGGAACTGCCGGTAGGATTTCACTCTCAACAACTTTACAATT
ACATCTTGAATTTTACTATAATTTCGCTATTGGATCAGTAAAGATTTGTC
TCCTTCTCCTTTTTTATTCATCCCTATGACTGATGTGTTATTACGATAAA
ACACCTTAGTAAAATATGATTAGCTTACTGTACGAACTTTCTCTCGTTGA
CAGCTTTTATGGCACCTGAGGTCATCACTTTAGACAAAGGGCGTGGTTAT
GGTCGAGCAGCTGATATCTGGAGTTTAGGTTGTGTTGTGATCGAAATGAG
CACAGGGAAAGTATGCAGTTTTTGATTTCCAAATTCCTTTGTAATTCTAC
AGTCTCTTTAAGCTCGAACCTCTATAACTCGAACGCCTTCTTAATTCGAA
AATCTCCTTAATTCGAACGTCTCCTTAATTCGAACGTCTCCTTATTTCGA
ACGTCTCCTTAATTCGAACGTCTCCTTATTTCGAACGTCTCCTTAATTCG
AACGTCTCCTTACTTCGACCGTCTTCTTAAATCGAACATCTCCTCAACTC
GAACAAGCTTCATAGTCCCTTCAGAAATTTCATTAACTCGAGAAAGTGTG
TGTTCCCCGTGAGTGTTAGAGTTATGGGGTGTCCACTGTATAAAAATATT
TCGTAGATTTCCTCCTTTCACATCCTTTAGTTCTTTGTATTCTATCTGAA
AACAATCCGGTTCGTTCACCTTTTTTGTTTCCCATCTTAGCAACCATGGT
ACGAATGTGACAACATATACGCCATCATGTATCGCGTTGGTGATGGGAAC
CACCCTCCAATACCTGACCGCCTTAGTGAAGAAGGGCGGGATTTCTTGGA
GTGTTGTTTTATTCATGATCAGAACTACCGGTGGACAGCCAACATGTTAG
AAGATCACGCCTTTGTGAAGGTTAAGAAATGAATAGCCATGAGGTATAAT
TTCTTTGCTTCTACTTGGTCAGTCAACGCAAACTAATAGCGATATTTTGA
TGCTTCATGTTTAACAATGACTTTTACCTTGTTTTTAATAGAGTGACCTT
TCTAGAACATACCTTCCTATCCATTCGCTTGTATTGCAAGAGGAACTCGA
GAATGAGCATCCAGTATATTGGAGACATCAAGAGAGCGCGTGGATATTGA
ATTCTGATAACTCTTAAAAAGAAATAATTCAGTGAGATTTGCTATATAAG
TTATTATGTTGAGTGTTTGTAGAGAAGTGGTATGTCCTTAATGACTGGAT
TTCTCTGCTGGAAAGATTTATAAATGTGATTTTGACGAAATGAATAAACG
AATGGATAGGAGTAAATGCGTCATGCAATACTTTCATATTAAAGAATGAA
TGAATGAATGAATGAATGATAAATCACTTATAGATAAATTTTAAACTCCT
AATGATCATTTGCTGTTAATATTTTTTGATTAATTTTATTGTATTGATAA
TTTTTTTATCTAAAATCCTTCGATCAAGATTTTGATTTTGGCTACCATTA
AGATATCATACAGATTTACGAAATTTTAATCACACAAGAGTTTTGTTTAA
ATTAGCTTTTTTTCATTCCTGTACAATACACCCTTAGATTATTTTTATAT
TNGCAGTTTTGTTTAAATTTGCTTTTTTTCATTCCTGTACAATACACCCT
TAGATTATTTTTATATTATGCTGTGTATAGTGTAGTTATAATTGTAGATA
GGGTATTAAAATAGTGTATTTTTATACTCATAAACCTCTCACTCTTTTCT
TTTCTTACAAGCCATTATTTCTTTTTATTGTATGTTTTTATCTTCTTCTT
TTTCATATTTATCACTATTTATTCTATTTCTTCGACACTTTTAAAGCGTT
TCTTTTAGACCGCGTTTCATCACCATCAGTGCGCCTTGTGCGCATTGAGA
GAAATTTGAGCATAGCTCCTTCGCTTCTATATTTTCTCGATGAACCAGAT
CTTGTTCGAATGAACGAGACCAAATTCATAATTCATTATTAAGAAAACTA
TTAGTGGTCTTGATGGTACAGGAATAAGTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005180XLOC_005180Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009250-exon-sc0000091-1575043694:91115..91166TCONS_00009250-exon-sc0000091-1575043694:91115..91166Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1575043694:90619..90858TCONS_00009250-exon-sc0000091-1575043694:90619..90858Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1575043694:89268..89338TCONS_00009250-exon-sc0000091-1575043694:89268..89338Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1575043694:88818..88934TCONS_00009250-exon-sc0000091-1575043694:88818..88934Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1575043694:87053..87212TCONS_00009250-exon-sc0000091-1575043694:87053..87212Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1575043694:84298..84420TCONS_00009250-exon-sc0000091-1575043694:84298..84420Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1575043694:84007..84113TCONS_00009250-exon-sc0000091-1575043694:84007..84113Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1575043694:83374..83576TCONS_00009250-exon-sc0000091-1575043694:83374..83576Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1575043694:82286..83275TCONS_00009250-exon-sc0000091-1575043694:82286..83275Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1510915933:91115..91166TCONS_00009250-exon-sc0000091-1510915933:91115..91166Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1510915933:90619..90858TCONS_00009250-exon-sc0000091-1510915933:90619..90858Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1510915933:89268..89338TCONS_00009250-exon-sc0000091-1510915933:89268..89338Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1510915933:88818..88934TCONS_00009250-exon-sc0000091-1510915933:88818..88934Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1510915933:87053..87212TCONS_00009250-exon-sc0000091-1510915933:87053..87212Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1510915933:84298..84420TCONS_00009250-exon-sc0000091-1510915933:84298..84420Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1510915933:84007..84113TCONS_00009250-exon-sc0000091-1510915933:84007..84113Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1510915933:83374..83576TCONS_00009250-exon-sc0000091-1510915933:83374..83576Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1510915933:82286..83275TCONS_00009250-exon-sc0000091-1510915933:82286..83275Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1491911889:91115..91166TCONS_00009250-exon-sc0000091-1491911889:91115..91166Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1491911889:90619..90858TCONS_00009250-exon-sc0000091-1491911889:90619..90858Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1491911889:89268..89338TCONS_00009250-exon-sc0000091-1491911889:89268..89338Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1491911889:88818..88934TCONS_00009250-exon-sc0000091-1491911889:88818..88934Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1491911889:87053..87212TCONS_00009250-exon-sc0000091-1491911889:87053..87212Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1491911889:84298..84420TCONS_00009250-exon-sc0000091-1491911889:84298..84420Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1491911889:84007..84113TCONS_00009250-exon-sc0000091-1491911889:84007..84113Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1491911889:83374..83576TCONS_00009250-exon-sc0000091-1491911889:83374..83576Clytia hemisphaericaexon
TCONS_00009250-exon-sc0000091-1491911889:82286..83275TCONS_00009250-exon-sc0000091-1491911889:82286..83275Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000091supercontigsc0000091:82286..91166 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.524094	0	0	0.396332	0	0	0	0	0	0	0.587193	0	0	0	0	0	0	1.73333e-06	0	0	0	0	0.44147	0	0	0	0	0.400696	0.0191556	0.280323
Blast
[Close]
BLAST of TCONS_00009250 vs. Swiss-Prot (Human)
Match: M3K4 (Mitogen-activated protein kinase kinase kinase 4 OS=Homo sapiens GN=MAP3K4 PE=1 SV=2)

HSP 1 Score: 385.185 bits (988), Expect = 1.501e-116
Identity = 177/311 (56.91%), Postives = 240/311 (77.17%), Query Frame = 1 
Query:  121 PMIRIRNAIQEIEERRTAKLQHMRVIGNVTYKKANFASELVHNVRKVNFKWQLGNKIGEGQFGKVYSAVNLDTGDLMAVKQVRFNPHDYGTVQEIADEITNIQGLLHDSLVKYFGVEIHKNEMLIFMEYCADGTIAEVAKVGLPESLIRVYTYQIIKAINFLHQSGVVHRDIKGANIFLSSSGLIKIGDFGSAVKLKDPMCTTQGEVFNTRGTAAFMAPEVITLDKGRGYGRAADIWSLGCVVIEMSTGKQPWYECDNIYAIMYRVGDGNHPPIPDRLSEEGRDFLECCFIHDQNYRWTANMLEDHAFVKV 1053
            P+  I+ +++  EE+R  +++   +IG V     ++ + +   +RKV FKWQ GNKIGEGQ+GKVY+ +++DTG+LMA+K++RF P+D+ T++E ADE+   +G+ H +LV+YFGVE+H+ EM IFMEYC +GT+ EV+++GL E +IR+Y+ QI  AIN LH+ G+VHRDIKGANIFL+SSGLIK+GDFG +VKLK+   T  GEV +T GTAA+MAPEVIT  KG G+GRAADIWSLGCVVIEM TGK+PW+E ++ + IMY+VG G+ PPIP+RLS EG+DFL  C   D   RWTA+ L DH+FVKV
Sbjct: 1293 PIEAIQKSVRLFEEKRYREMRRKNIIGQVCDTPKSYDNVMHVGLRKVTFKWQRGNKIGEGQYGKVYTCISVDTGELMAMKEIRFQPNDHKTIKETADELKIFEGIKHPNLVRYFGVELHREEMYIFMEYCDEGTLEEVSRLGLQEHVIRLYSKQITIAINVLHEHGIVHRDIKGANIFLTSSGLIKLGDFGCSVKLKNNAQTMPGEVNSTLGTAAYMAPEVITRAKGEGHGRAADIWSLGCVVIEMVTGKRPWHEYEHNFQIMYKVGMGHKPPIPERLSPEGKDFLSHCLESDPKMRWTASQLLDHSFVKV 1603
The following BLAST results are available for this feature:
BLAST of TCONS_00009250 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
M3K41.501e-11656.91Mitogen-activated protein kinase kinase kinase 4 O... [more]
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