TCONS_00009272 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009272
Unique NameTCONS_00009272
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3165

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009272 ID=TCONS_00009272|Name=TCONS_00009272|organism=Clytia hemisphaerica|type=transcript|length=3165bp
ctttgtagaaagtaaagttgaaaaaaaaattcatacaaGATAATAATCTA
ATTGAGATGACTTGACAAAAAGCAATGGGCGAAAGAAATGGAAAGACATG
TCTGAGATTATTCACAAACGACAAGATGAAGAAGGGGGATTCCCCTTTGG
TGACGAAGATACTTTTCTGAGGGGAATTACCCTTTCATTCTCATGGGATT
ACCCTGATGACTTCAGTCTGAAAGATGTACAAGAGAATGTCTTCTTTGTT
TAcgatgaaaaaaacaaaccgaGGTCAGAATCACAGTACACATGTGATTG
TATCCAGGAATCAGGTGCTGGTGTACTACTATTGAAACCTCATCCAGAAA
TAAATTCTCCATCACCGAGTGAAATTCATTTCACACCAAATCATCCATCA
CAATGTGAATTTCTGATTCAAAAGATGACGATTGTTAGTGAATCGCGTCA
CTTGGAATTGTATATCGACAACGTGTATGAAATGACAGCTAAAGGATGTG
CCCTTACACTCAAGAAAGGAAGCAAACCAGCTCTTTATGAATGTCAATTT
GAAATTCCAAATCACTTTGAACCATCCCAAAAACTCGGATTAAAGTTTCT
TTCACTCGGGGACCGTAACACAATGCGCCTACAGGCTGTCATCATCCAAG
TGACTCACCATCAGAAGCCAGCCATGCAAAACCAAACTCCATTCCCACAG
GGTGTTACAGGTCTTCCAGGCACTTCCAACGTGGATATCGGTGGAGTTCG
AGAAATGTTACAATCCATGGGTTTGAACGTTCCAAACAAAGCTGACCAAT
TAATGACCGATATTGAACATCAACAAAAACAGttGCAGATGAAACAATTA
CAAGGACTAGCGAACGTCGGATTAATGGCACAATTACAAACACTCACTCA
CCAACAACAAACActtcaacaacaaaatcaaTCCATGCAATTCCTTCAAG
CAATGTTTAACCCTACAAAACCTAACACGAACTCTCCTACTACTAACGGG
CACGCCAAGAGCTCTTCCTCGTCAACTCGTGGCTCATCAAGAAGCGCCAG
TCCGAGATTAACAAACGGTCATCGCTCACCTGAAAGCAAGTATCCTGTTT
CCCGCGAGTCAGTTAATCCGCCAGAATCTTCGCTCAGGAGAGCGTCCTCC
ACATCAACAATCAAGTCGCAAAGTGTTGGTTCTTTTGATCATTATAACGG
ATTTGGCACCTCATACCCTTCAACTGATTCGATTCTTCAAAGCGCCATAC
ATAACGAAGAAGAAGCAAGACAACTAGCAAGAACTAGAGCGTCACACATA
GAAGAACAAAACCAAGAGAACAACAATTACGAGAAAACGCAAATTGAGAT
GGTCAAGAATTTCCTTCGATCTAGTGACCCTACATCACGGAAAATAACGA
TCACAAAGTTACCGCCAAAACCTGCCCGAGGCCGCCCTCAAAAGAGAGGT
GATGGTGATCGGAAGCCACGCCCTCATTCTATGTCTGCTTTGCCGAGCGC
CAGTGAAGTGGACTTTACAAAGTTGTTGAGTCAAATGATGCACGAGGAGA
AAGAGGGATTGGCGAGTGGTGATGAAAAAGCTACTTTTGGTCCCGATGCT
AACAACGCACGGTGGTCGGCATACTTGCGGTCGCGCGTCCGCGCAAGCCA
ACGTTTCTCATCTTCTGCATCGTCCAATTATCCTTCTTCAGACACTctgg
atgacgtcatcagcccATCGGAAAGTTGTCCATCATGTGGTTGCCAAGGA
TGCAATGCAACATTGAACAAAATGCATAAAGAAATGTTAGTAATGGAAGC
ACGTATGACCCATCAAATGCAAACACAAATTTCGAACCTCCAACAACACA
TTGATTCTCGTATCGATCAAATGTATAGCATGATGATGGGTAACTTCTTT
AATATGGAACCTTCTACTTCTGCTGTGTAAGATTTGTTGTTATTCAGTGT
CGTATTGATGCAACTATACAACTATCAACCTTTAAGCGTAAGGAGACTAT
GTCAAAGTTTACCGGGAATGATCATGGTGTCAGCCCCCCCTCCtccagaa
atctgaagggcacctaggccaggtttAGTAGCCCTTTGGGGTTACTTATT
CATTGGGGGTGCCTAgctgttttgatgatttcgtgATTCCCAAACCACCC
TAAAAATCATTAAGGTTTTAGGAATGAAAAAATAAGTGTCAATCCAAAAA
AGTTATCGGCTGaatgggggtacctaactcaaagcaatttctcaaaagaa
cctaactcgttgggggcaccatgcttcaatggggcacctgaaaagtgagC
TGAAGCCATAATGTTTGACATCAAAAGCCTGTTTCCATTAGCATCGAATC
TTTCCTATTAAACTCTGATCCAGTCTCCTCACGTCTCACGGCTTACGGAG
ATGTCGCCAAAAATGGGATCGGTCACTTTTTACTTCGAGGATCCATCGGG
TTTCGATAACTTTAAAAGATAGTTAAGCGCGACTGTTTGAGagtaatagc
ttttttattagCGACGAGTTATTCTTTTTCAATTAGGAAATACCTCCTAG
ATAACTAACGTCTGGTAAAGACTTTATAATTAATAAATTTCGTATGTGAT
TTTGTTGtgattgaaaagatatttttaagttttttattttttataatttc
aggGTAGATTAAAATGATAACGCTTTACAATTTATATcatatatttaaaa
tgaaaattatattattCAGATAATCATATTAGTTTTAATATTTCAATAGA
ATTCTTTGAATAATTTTTGGGAGCACGAATCTGGGATCCAGTTTCTGAGC
AAAATTTGTTTATAAATAATTGCGTTGAGCTACCAGGCTCTTGAACAGAG
CTCGAAAAATAAACGGTTTAATTAAATGCAAGGTTTCTTTAGACTaacaa
tatttatattttgattACTTTAGGAAAATGTACAATTTTATTCATATTGT
AAAACTAACAATCTAGTGAGAGATTGCTTTTTTAAACtaaatatattatt
tttgatGTAGATAAAATAATTAGGTATAAAATATTAACACCTGTTTGCTT
GTTTACTcccaggtgcctaataaacggaGGGGGATCCTAATTACAGGGAA
TTGCAAATTGTACCTGTCAATACCCCCAaactaaaatcaggctatttaga
ctagAATAAGGGCCT
Run BLAST on NCBI

protein sequence of TCONS_00009272-protein

>TCONS_00009272-protein ID=TCONS_00009272-protein|Name=TCONS_00009272-protein|organism=Clytia hemisphaerica|type=polypeptide|length=610bp
MSEIIHKRQDEEGGFPFGDEDTFLRGITLSFSWDYPDDFSLKDVQENVFF
VYDEKNKPRSESQYTCDCIQESGAGVLLLKPHPEINSPSPSEIHFTPNHP
SQCEFLIQKMTIVSESRHLELYIDNVYEMTAKGCALTLKKGSKPALYECQ
FEIPNHFEPSQKLGLKFLSLGDRNTMRLQAVIIQVTHHQKPAMQNQTPFP
QGVTGLPGTSNVDIGGVREMLQSMGLNVPNKADQLMTDIEHQQKQLQMKQ
LQGLANVGLMAQLQTLTHQQQTLQQQNQSMQFLQAMFNPTKPNTNSPTTN
GHAKSSSSSTRGSSRSASPRLTNGHRSPESKYPVSRESVNPPESSLRRAS
STSTIKSQSVGSFDHYNGFGTSYPSTDSILQSAIHNEEEARQLARTRASH
IEEQNQENNNYEKTQIEMVKNFLRSSDPTSRKITITKLPPKPARGRPQKR
GDGDRKPRPHSMSALPSASEVDFTKLLSQMMHEEKEGLASGDEKATFGPD
ANNARWSAYLRSRVRASQRFSSSASSNYPSSDTLDDVISPSESCPSCGCQ
GCNATLNKMHKEMLVMEARMTHQMQTQISNLQQHIDSRIDQMYSMMMGNF
FNMEPSTSAV
Run BLAST on NCBI

transcript from alignment at sc0000091:208145..214065-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009272 ID=TCONS_00009272|Name=TCONS_00009272|organism=Clytia hemisphaerica|type=transcript|length=5921bp|location=Sequence derived from alignment at sc0000091:208145..214065- (Clytia hemisphaerica)
CTTTGTAGAAAGTAAAGTTGAAAAAAAAATTCATACAAGATAATAATCTA
ATTGAGATGACTTGACAAAAAGCAATGGGCGAAAGAAATGGAAAGACATG
TCTGAGATTATTCACAAACGACAAGATGAAGAAGGGGGATTCCCCTTTGG
TGACGAAGATACTTTTCTGAGGGGAATTACCCTTTCATTCTCATGGGATT
ACCCTGATGACTTCAGTCTGAAAGATGTACAAGAGAATGTCTTCTTTGTT
TACGATGAAAAAAACAAACCGAGGTATAATCAAAATACTCTTTCATTCTT
CTCCAAGATTCTTTTCAGAAATTTACATAGTTGACGCTCTCTAATTAATT
TATTTTCAAGGTGAATTGGATTGTCAATTATTGTGAATAGTAGAGCGTTA
TTTATGAGAGTTTCTTGTTGACAGTGACTTTCAATAATGGAGGGCGTGTT
GAATAGTAGAACATCGAGAGCGTAACCTGTGAACTGAAAACTTTATTTTA
TCAACAAATGCGAAGATTCGGCAGCATTTTTCTTCATTTATTCGATCAAC
ATTGTGTACTTGAGTATGAATTCACTCTCGAATGAAAAGCTCTGAAAAGA
AGTTTTGTATAAATTATTTTTCATTCCAAACGATTTCATAAGAACAGTAA
GGCTTCAATGCTAAAAATAAAACCAATTTGAGAATAACCCTGAAGCAATC
TAAAATTCAATTTTCCGTTAAGGGTAAGAACATGATAACAACACAATAAT
ATACTGTTTTTTTAACGATTGTAATCGTTCTTCCTACAGGTCAGAATCAC
AGTACACATGTGATTGTATCCAGGAATCAGGTGCTGGTGTACTACTATTG
AAACCTCATCCAGAAATAAATTCTCCATCACCGAGTGAAATTCATTTCAC
ACCAAATCATCCATCACAATGTGAATTTCTGATTCAAAAGATGACGATTG
TTAGTGAATCGCGTCACTTGGAATTGTATATCGACAACGTGTATGAAATG
ACAGCTAAAGGATGTGCCCTTACACTCAAGAAAGGAAGGTATATTTCTTG
TTAATTTCCCTTCAAATCCAACTTATCAGCGAGCTTATCTATCTATATTT
TTCTGCCATTGAGATGGTTATCTTCTGAATTTGCCTAGTTCCTGGTTGAC
TGAGGACGGCAGTAAATCATTATTTTTACTGTCCTCGATTTTGCGGGTCA
AAACTTTGTGCAAATGTGAAAAAGTGCAAATGTATAAACTCACTGTTTTA
CTATAATGTAGTGTGAAATCTATTGTTTCGCGAGGTGAACAGGTGAATGC
ATTGTATTGAAGTCATTTATTCTTCTTTTTCTATGTATGTTGGAAATGCA
TTTCTTCTTTCGTTCTTAGCAAACCAGCTCTTTATGAATGTCAATTTGAA
ATTCCAAATCACTTTGAACCATCCCAAAAACTCGGATTAAAGGTAAGTAA
TAATTTCATTAAAGAGCGTCATTTAACTTATCTCTTACCATCTGCATACA
CAACATTCTTAAACAAGAGAAAGAACTGCTTTCTCCTCTTCCACTCCGCG
CGAACACAAATTTCGAGAAATTCTATTGTTTTTTCTGTTTTGTCAGCATA
GAGGCCACGAAAAAAATAAAAGAATCTTTGAGTGCCAAGAATTACATAAT
AGTTTAGTTAACGTCATTTTTTACGCATTGTCATTCTTCGTCATTTGAAT
TTTATGAAATGATGGAAACAGTTTTGAAGAGTAATCATTATACCGCTTGC
ATCAGCCCACTGAACATTATTGTATTGGAATGATGTGGTTTTCTTACAAT
AAGTCAAAACATACGAAGGACATTAACAGCCAGTAAAAAAAGACCAAAAG
TAACGCGGATCTTTCTTACAATTTTTCTCATGTTTTTTGACCTGTCTTTT
TGAAGCAGTTTGTAGCAGTTCTCTACAAAAACAAGAGCTTAATGAAAATA
ATTCGACTCAATTTTGTTAAGTCGTTGTTTACTATGATTTTCCTTTATTT
AGTTTCTTTCACTCGGGGACCGTAACACAATGCGCCTACAGGCTGTCATC
ATCCAAGTGACTCACCATCAGAAGCCAGCCATGCAAAACCAAACTCCATT
CCCACAGGTTTCCTTTCGTTTGCTTCATTTTCGACTTTGGTAATCTTAAT
CTCATTTTTATCAAAGAAAATTTTCGGCTACCTGTATTTTCTGGGAATAT
TTTCCATCTTATAGTCTATAGACATTTTGATATCAAGTCCAAAATACCAA
CATTGAGTTTTAACTTGACAGGGTGTTACAGGTCTTCCAGGCACTTCCAA
CGTGGATATCGGTGGAGTTCGAGAAATGTTACAATCCATGGGTTTGAACG
TTCCAAACAAAGCTGACCAATTAATGACCGATATTGAACATCAACAAAAA
CAGGTTTATTTTGCATATTTTGAATTTAAAATTCAAGCTTGACAAATGTT
GCAATAACACACGGTCTAAAAGTTTGAACCGCAACTACATGAATAAAGAA
TACTTTATACGCTTATTTCAACCAATTCTTTGTTGATCAGGTTTATTGTC
AAACGATGACATATATTGTGCATTGTCTTACAATTCTCAATAGATTCTCG
GGATCCTATAATCAACCTTGTTTATTTGATAAGTCGATTTAATCACCATT
CTCTCCGTTTTTAAAAACTTTTTAGTTGCAGATGAAACAATTACAAGGAC
TAGCGAACGTCGGATTAATGGCACAATTACAAACACTCACTCACCAACAA
CAAACACTTCAACAACAAAATCAATCCATGCAATTCCTTCAAGCAATGTT
TAACCCTACAAAACCTAACACGAACTCTCCTACTACTAACGGGCACGCCA
AGAGCTCTTCCTCGTCAACTCGTGGCTCATCAAGAAGCGCCAGTCCGAGA
TTAACAAACGGTCATCGCTCACCTGAAAGCAAGTATCCTGTTTCCCGCGA
GTCAGTTAATCCGCCAGAATCTTCGCTCAGGAGAGCGTCCTCCACATCAA
CAATCAAGTCGCAAAGTGTTGGTTCTTTTGATCATTATAACGGATTTGGC
ACCTCATACCCTTCAACTGATTCGATTCTTCAAAGCGCCATACATAACGA
AGAAGAAGCAAGACAACTAGCAAGAACTAGTATAATTTCCTTTTAATTTA
TCAAATCAATATTATGTACATTTTAGAAATTATGAATTATCTGATTCTTC
TACATGATCAATGCGCAAGTAATAGTCTAAAAGAAATGATACTGTTTTTT
CTTAGGAGCGTCACACATAGAAGAACAAAACCAAGAGAACAACAATTACG
AGAAAACGCAAATTGAGATGGTCAAGAATTTCCTTCGATCTAGTGACCCT
ACATCACGGAAAATAACGATCACAAAGTTACCGCCAAAACCTGCCCGAGG
CCGCCCTCAAAAGAGAGGTGATGGTGATCGGAAGCCACGCCCTCATTCTA
TGTCTGCTTTGCCGAGCGCCAGTGAAGTGGACTTTACAAAGTTGTTGAGT
CAAATGATGCACGAGGAGAAAGAGGGATTGGCGAGTGGTGATGAAAAAGC
TACTTTTGGTCCCGATGCTAACAACGCACGGTAAGTGGCGGCCTGATTTG
CATAATTCGTAAAGGATTCTATAGTGCTTTCGATTGAGGATAAGAAAAAA
CCTAGATAAGTGGGCTTGGTTTAACTTCAAGGATGCACTTATTGTTTCTT
AGATTGATCTCAAGAACGAGGTTCGTCACAGTGAATAATCTCCTTATCTC
ACCACGTGAAGATAATATGTGAATTATTCATTTTTGAGTGCTACCACTTG
TTATTTTACTTCTACTGCTCTAGTAATTAGCTGACTAATGTTTTTTGCTC
AGAACATCTTTGTTTGGATCTGCTTTAAACTTCATGTATATTTTATCCAG
ATGTACTTTCCTGTATCTACAGAAAAGACCAGTTTTAACTTGTAAAAACC
TGTGTACATTATTTACTTTTGTCTGGAAATGGTTCCGCTACAAACGTCAC
AGTAGAGAAACACTGAACAGACAAAGAACTCACATCTTGTTTTTCATTTC
AGGTGGTCGGCATACTTGCGGTCGCGCGTCCGCGCAAGCCAACGTTTCTC
ATCTTCTGCATCGTCCAATTATCCTTCTTCAGACACTCTGGATGACGTCA
TCAGCCCATCGGAAAGGTATGAGTCACCATTGGTTGAACAAGCAATTTTA
GTTGTTATTAATTATGAAATGTCAAAACATTGATTATCATTTACTTGTGT
TAATTTGCACTTTCTATCTGGAACTTTGATAATTCATTCGAGTACAGCTT
CTTTTCCCTTCAGTTCAGTTAGTTAATATTTTTTGCTAATACTAGAACAA
GTTTGTGTACACGTCTTCTGAGTGAGAGTTCTGCGGAGGAAAGTGTGGCT
TTCTATGAGTTTTCTTGCACCCTAAAGATTAAGCTTGGATTATTTCCAAA
AAGTTTTAGGAAAACTTTCATCATTTTTTAGTTGTCCATCATGTGGTTGC
CAAGGATGCAATGCAACATTGAACAAAATGCATAAAGAAATGTTAGTAAT
GGAAGCACGTATGACCCATCAAATGCAAACACAAATTTCGAACCTCCAAC
AACACATTGATTCTCGTATCGATCAAATGTATAGCATGATGATGGGTAAC
TTCTTTAATATGGAACCTTCTACTTCTGCTGTGTAAGATTTGTTGTTATT
CAGTGTCGTATTGATGCAACTATACAACTATCAACCTTTAAGCGTAAGGA
GACTATGTCAAAGTTTACCGGGAATGATCATGGTGTCAGCCCCCCCTCCT
CCAGAAATCTGAAGGGCACCTAGGCCAGGTTTAGTAGCCCTTTGGGGTTA
CTTATTCATTGGGGGTGCCTAGCTGTTTTGATGATTTCGTGATTCCCAAA
CCACCCTAAAAATCATTAAGGTTTTAGGAATGAAAAAATAAGTGTCAATC
CAAAAAAGTTATCGGCTGAATGGGGGTACCTAACTCAAAGCAATTTCTCA
AAAGAACCTAACTCGTTGGGGGCACCATGCTTCAATGGGGCACCTGAAAA
GTGAGCTGAAGCCATAATGTTTGACATCAAAAGCCTGTTTCCATTAGCAT
CGAATCTTTCCTATTAAACTCTGATCCAGTCTCCTCACGTCTCACGGCTT
ACGGAGATGTCGCCAAAAATGGGATCGGTCACTTTTTACTTCGAGGATCC
ATCGGGTTTCGATAACTTTAAAAGATAGTTAAGCGCGACTGTTTGAGAGT
AATAGCTTTTTTATTAGCGACGAGTTATTCTTTTTCAATTAGGAAATACC
TCCTAGATAACTAACGTCTGGTAAAGACTTTATAATTAATAAATTTCGTA
TGTGATTTTGTTGTGATTGAAAAGATATTTTTAAGTTTTTTATTTTTTAT
AATTTCAGGGTAGATTAAAATGATAACGCTTTACAATTTATATCATATAT
TTAAAATGAAAATTATATTATTCAGATAATCATATTAGTTTTAATATTTC
AATAGAATTCTTTGAATAATTTTTGGGAGCACGAATCTGGGATCCAGTTT
CTGAGCAAAATTTGTTTATAAATAATTGCGTTGAGCTACCAGGCTCTTGA
ACAGAGCTCGAAAAATAAACGGTTTAATTAAATGCAAGGTTTCTTTAGAC
TAACAATATTTATATTTTGATTACTTTAGGAAAATGTACAATTTTATTCA
TATTGTAAAACTAACAATCTAGTGAGAGATTGCTTTTTTAAACTAAATAT
ATTATTTTTGATGTAGATAAAATAATTAGGTATAAAATATTAACACCTGT
TTGCTTGTTTACTCCCAGGTGCCTAATAAACGGAGGGGGATCCTAATTAC
AGGGAATTGCAAATTGTACCTGTCAATACCCCCAAACTAAAATCAGGCTA
TTTAGACTAGAATAAGGGCCT

Coding sequence (CDS) from alignment at sc0000091:208145..214065-

>TCONS_00009272 ID=TCONS_00009272|Name=TCONS_00009272|organism=Clytia hemisphaerica|type=CDS|length=1833bp|location=Sequence derived from alignment at sc0000091:208145..214065- (Clytia hemisphaerica)
ATGTCTGAGATTATTCACAAACGACAAGATGAAGAAGGGGGATTCCCCTT
TGGTGACGAAGATACTTTTCTGAGGGGAATTACCCTTTCATTCTCATGGG
ATTACCCTGATGACTTCAGTCTGAAAGATGTACAAGAGAATGTCTTCTTT
GTTTACGATGAAAAAAACAAACCGAGGTCAGAATCACAGTACACATGTGA
TTGTATCCAGGAATCAGGTGCTGGTGTACTACTATTGAAACCTCATCCAG
AAATAAATTCTCCATCACCGAGTGAAATTCATTTCACACCAAATCATCCA
TCACAATGTGAATTTCTGATTCAAAAGATGACGATTGTTAGTGAATCGCG
TCACTTGGAATTGTATATCGACAACGTGTATGAAATGACAGCTAAAGGAT
GTGCCCTTACACTCAAGAAAGGAAGCAAACCAGCTCTTTATGAATGTCAA
TTTGAAATTCCAAATCACTTTGAACCATCCCAAAAACTCGGATTAAAGTT
TCTTTCACTCGGGGACCGTAACACAATGCGCCTACAGGCTGTCATCATCC
AAGTGACTCACCATCAGAAGCCAGCCATGCAAAACCAAACTCCATTCCCA
CAGGGTGTTACAGGTCTTCCAGGCACTTCCAACGTGGATATCGGTGGAGT
TCGAGAAATGTTACAATCCATGGGTTTGAACGTTCCAAACAAAGCTGACC
AATTAATGACCGATATTGAACATCAACAAAAACAGTTGCAGATGAAACAA
TTACAAGGACTAGCGAACGTCGGATTAATGGCACAATTACAAACACTCAC
TCACCAACAACAAACACTTCAACAACAAAATCAATCCATGCAATTCCTTC
AAGCAATGTTTAACCCTACAAAACCTAACACGAACTCTCCTACTACTAAC
GGGCACGCCAAGAGCTCTTCCTCGTCAACTCGTGGCTCATCAAGAAGCGC
CAGTCCGAGATTAACAAACGGTCATCGCTCACCTGAAAGCAAGTATCCTG
TTTCCCGCGAGTCAGTTAATCCGCCAGAATCTTCGCTCAGGAGAGCGTCC
TCCACATCAACAATCAAGTCGCAAAGTGTTGGTTCTTTTGATCATTATAA
CGGATTTGGCACCTCATACCCTTCAACTGATTCGATTCTTCAAAGCGCCA
TACATAACGAAGAAGAAGCAAGACAACTAGCAAGAACTAGAGCGTCACAC
ATAGAAGAACAAAACCAAGAGAACAACAATTACGAGAAAACGCAAATTGA
GATGGTCAAGAATTTCCTTCGATCTAGTGACCCTACATCACGGAAAATAA
CGATCACAAAGTTACCGCCAAAACCTGCCCGAGGCCGCCCTCAAAAGAGA
GGTGATGGTGATCGGAAGCCACGCCCTCATTCTATGTCTGCTTTGCCGAG
CGCCAGTGAAGTGGACTTTACAAAGTTGTTGAGTCAAATGATGCACGAGG
AGAAAGAGGGATTGGCGAGTGGTGATGAAAAAGCTACTTTTGGTCCCGAT
GCTAACAACGCACGGTGGTCGGCATACTTGCGGTCGCGCGTCCGCGCAAG
CCAACGTTTCTCATCTTCTGCATCGTCCAATTATCCTTCTTCAGACACTC
TGGATGACGTCATCAGCCCATCGGAAAGTTGTCCATCATGTGGTTGCCAA
GGATGCAATGCAACATTGAACAAAATGCATAAAGAAATGTTAGTAATGGA
AGCACGTATGACCCATCAAATGCAAACACAAATTTCGAACCTCCAACAAC
ACATTGATTCTCGTATCGATCAAATGTATAGCATGATGATGGGTAACTTC
TTTAATATGGAACCTTCTACTTCTGCTGTGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005186XLOC_005186Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009272-exon-sc0000091-1575043694:213793..214065TCONS_00009272-exon-sc0000091-1575043694:213793..214065Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1575043694:213028..213276TCONS_00009272-exon-sc0000091-1575043694:213028..213276Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1575043694:212624..212696TCONS_00009272-exon-sc0000091-1575043694:212624..212696Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1575043694:211959..212063TCONS_00009272-exon-sc0000091-1575043694:211959..212063Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1575043694:211663..211794TCONS_00009272-exon-sc0000091-1575043694:211663..211794Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1575043694:210937..211390TCONS_00009272-exon-sc0000091-1575043694:210937..211390Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1575043694:210486..210810TCONS_00009272-exon-sc0000091-1575043694:210486..210810Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1575043694:209900..210013TCONS_00009272-exon-sc0000091-1575043694:209900..210013Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1575043694:208145..209584TCONS_00009272-exon-sc0000091-1575043694:208145..209584Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1510915933:213793..214065TCONS_00009272-exon-sc0000091-1510915933:213793..214065Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1510915933:213028..213276TCONS_00009272-exon-sc0000091-1510915933:213028..213276Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1510915933:212624..212696TCONS_00009272-exon-sc0000091-1510915933:212624..212696Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1510915933:211959..212063TCONS_00009272-exon-sc0000091-1510915933:211959..212063Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1510915933:211663..211794TCONS_00009272-exon-sc0000091-1510915933:211663..211794Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1510915933:210937..211390TCONS_00009272-exon-sc0000091-1510915933:210937..211390Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1510915933:210486..210810TCONS_00009272-exon-sc0000091-1510915933:210486..210810Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1510915933:209900..210013TCONS_00009272-exon-sc0000091-1510915933:209900..210013Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1510915933:208145..209584TCONS_00009272-exon-sc0000091-1510915933:208145..209584Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1491911889:213793..214065TCONS_00009272-exon-sc0000091-1491911889:213793..214065Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1491911889:213028..213276TCONS_00009272-exon-sc0000091-1491911889:213028..213276Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1491911889:212624..212696TCONS_00009272-exon-sc0000091-1491911889:212624..212696Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1491911889:211959..212063TCONS_00009272-exon-sc0000091-1491911889:211959..212063Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1491911889:211663..211794TCONS_00009272-exon-sc0000091-1491911889:211663..211794Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1491911889:210937..211390TCONS_00009272-exon-sc0000091-1491911889:210937..211390Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1491911889:210486..210810TCONS_00009272-exon-sc0000091-1491911889:210486..210810Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1491911889:209900..210013TCONS_00009272-exon-sc0000091-1491911889:209900..210013Clytia hemisphaericaexon
TCONS_00009272-exon-sc0000091-1491911889:208145..209584TCONS_00009272-exon-sc0000091-1491911889:208145..209584Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009272-proteinTCONS_00009272-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000091supercontigsc0000091:208145..214065 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.83872	7.0069	1.8698	1.34488	199.232	148.825	38.5218	40.7797	19.4283	27.2099	18.6285	13.7881	7.75862	6.23974	5.8388	6.67626	12.0461	10.6837	7.87189	10.6927	7.47223	10.1033	12.6956	12.9277	11.4287	12.0652	7.26611	5.40453	15.3242	13.8613
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR028043DUF4506
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009272 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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