TCONS_00009279 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009279
Unique NameTCONS_00009279
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3304

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009279 ID=TCONS_00009279|Name=TCONS_00009279|organism=Clytia hemisphaerica|type=transcript|length=3304bp
tGGTAAGTGAAATTCCTGGCGAAATTTATGAAAGTGTTATTTCCTTCTAT
TTGgcagcaaaaaataaataaaatcttccTATTCTATGAGGTGGTACGCC
ACCATGGTATTAGAAttgacaaattttcaatttttaaacttACTCGAACT
CGAAATTGTGAGGAGTTCGAGTAATTTGTTTACTCGAACTTGACTGTTTG
AGTAAGTTCGAGCAATTTCGATAAATTCGTCTAAAGTTCCAGTAATGGGG
TCTCTGGTTTCTTGATGAAATATTgtttgattgaatgaaaaagctggaaa
aagcccgaattttgagctgtgtGTACACGGCGTGCGTGCGTACCTGTTTC
TCTTCGTTAGCGACTTTCTGTCTTGGTCTGGAAAATTACTGTTATGACCT
GTTTTCATTGACCCGCGGTCTGTAAAATGTACCTATTTTCCGTAGAACGC
CTCctcgcaaaatttgaaaatttgtagtTGGCTGAAGTTGGTCAAGCGGG
AAACACTGAACGGAAGAATCATTTTGGGTCAACTAAAAGATCATCTTTCA
GAATGAATACAGTTGATGTTCTTGCTGATGTTAAGTCATCCATGACTCAA
AGAAAAGCTAGACGTTATTCAGAACCGGGTAGAGGTAGGAGAATACGATG
TCCTGAAGAAATTCTACGTGATATACGAGGCTTGAAGCTTCGTCAAAGAG
TTTCACTTGTTTTGGGTGATGAATTACTCAAAGATGAACTCGAGCAAACC
ATTCGAAATAGCACTGTGAATGGAGTTACAAGAGCTGATACTATAAGaac
ttttcaagactttttgaTCCCACAAGCTCAGCCAAACTTTGTAAATATTG
GAGGAGGTATAGGATCTGCTGGAACAGGAATGGTTGTCCTTCCAGTCAAT
GATATCAAAGGAAACGGAACAACAAGTTACAACATAAATGAAAGACAGCT
AAGAAGTAAATTAGCTGCAGTTTATCGCTTGGTTGACTTATTAGGATGGT
CTGAATCTATCTACAACCACATTTCTGTTCGACTATCGAATGAATCAAAT
GAATACCTGATAAATCCTTTTGGACTCCTATTCAATGAAATTACAGCCTC
TTCACTNATACCTGATAAATCCTTTTGGACTCCTATTCAATGAAATTACG
GCCTCTTCACTCGTTAAATGTGATGCTAGTGGAAATGTTGTGGATGAAGG
CAGCACAACATTAGGACTGAACAAGGCTGGATTTGTTCTTCACTCCACCA
TTCATGAATTTCGACCAGATTTGAATTGTATCATTCATGTGCATACACCT
GATGTCATTGCTGTATCATCAATGAAATGTGGCTTACTAAGAATCAGTCA
AGAGTCGCTCGTTGTTGGAAATGTTTCATATCATGATTACAAAGGGATTC
TCATCAATGAAGAGGAGAGAGAAAGCATCCAAAATGATCTTGGTACAGAG
AACAAGATAATGATATTGAGGAACCATGGTGCTGTTATTTGTGGCGCTTC
CATTGAAAGTGCTTTCCATGATTTGCTCAATTTTATGGATGCTTGTGAAA
CTCAGGTAAAAGCAATCCCAATCGGGCTGGACAACTTGAATATTGTGAGT
GAGGAAGCGTTCCAACAAGTCCAAGATATCCAAAGGAACAACTGTAAGAT
CAATGTAACAGCTGAAGGGAAGCCGCAAATGAGTCTTGCTGATCTAACCT
TTGAAGCATATATGAGATGGATGGACTCCCAAGGTTATCGCACCGGTTAT
GCCTACCGAGTTCCAGATTTGTTCACATCTccacaaaagaagaaaatccc
AGCATCTCAAATACCACCACACATGTCACCCGAGCAAATTAACCCTTACC
AAGCGCTGTATGATTTGAAAGGGCCATCGATGAGTCGAGGTAATACGCAT
CGTAACCGCTTCAAATGGTTGAACAACCCAGTCCAATCAACACAGTACAA
GAAGGAATTCATTCAAAAGCAGCAACCACAAATTGAGCCTCCTATCTTGG
ACGAGGAACCTCCCATGACGAATGGACACATCGACGAACAAGTTACCACA
GAAGTCTCCACGcacaacgataccaaagttgtcACCAAGACGACCACAGT
GACTGAAACACAAGTTATCACTGAAATCTCCGCTGGCAACAAAGACGCAA
AGAAAGAAACGATAACTGTGGTTAATGGAAGCACCAGTTCTCACAGCATA
AGCCCCACAGAGGAAAGTAGAGAATCTGTGGTTCAGGAAGCACCACAACC
CAAAGTGGAAGACAAACAACCAGTGGCCGCAGCCAGCCCCACCAGAAACG
GCTCTGCTCCCGATATTTCATCGCCTTCCCATGAAAGTGTAAAGTCACCA
AGTAAAGTGAAGAAATCTAAGAGTTTCAAGAATATGTTTGgtaaaaagaa
agataaaaaggAAGGCAAATAGTGGGCTTAGGATTGCCCTAATACTTCTT
TCAACATCGAAGCGTATAATAAACATGAAGAGCTCAGATATTTTCATTCA
TGAGTTATGGGTAAGGAAAGTTATATCACAATCTTATCCTGACCAAGATG
GTGAGACAAGAAGAGATGAGACATTCGTTCACAAAAATGATCATGCATAC
AAAAAGAACTTCTTTATTTATTTAACTTTTCTGAATTGACAAAAGTATAT
ATTTAGTAAGTATTAATATTCGTGACCAATTTCCATCTTTTTAAGACACA
TCGATGAATAAAgggaatttttattttagGCGATaatgttaaaatatttt
ataacaTAGTTTTGTTTCTCAATCACTTGTAAAAGGAATCTCCTTTTTAT
TGTAGCAGGATAGGTCACGAGCCAgcctttttgatattgaaagtattttt
ctgaattaGAATAGTCTGAAAAGGAGGGGTCAAATTTATTATTTTGagct
tttcatttttatcatagatgtttaattttattttgtaaaattttatcTCA
AGAAATTATTATAATTAATCTATATCAAATAATAGAGATTTTATCGCGTA
TTATTATCcttttttattcactttttatttttgtatgaaATTCTTTAGTG
TACATATAGCTTTATTTGTGAGTTTTGTTTTAGTATAATTTTTACGTTAC
TTAATAACATCGACCGAGTGGCCATTTTTCGCCCCTAACAAACAGGCTAT
TAAAAATTTACGTTATTTTTTGCacttaaaaaagtgaattaataTAAATA
ATAAGTAGAGCATTGTCTAAAACAAAAGATAAAATTAATTTatggaatta
tatttttcacGCTTTCTTTCTTTGACCTGgaatttttttctcccttttcC
CGAA
Run BLAST on NCBI

transcript from alignment at sc0000091:261611..272488-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009279 ID=TCONS_00009279|Name=TCONS_00009279|organism=Clytia hemisphaerica|type=transcript|length=10878bp|location=Sequence derived from alignment at sc0000091:261611..272488- (Clytia hemisphaerica)
TGGTAAGTGAAATTCCTGGCGAAATTTATGAAAGTGTTATTTCCTTCTAT
TTGGCAGCAAAAAATAAATAAAATCTTCCTATTCTATGAGGTGGTACGCC
ACCATGGTATTAGAATTGACAAATTTTCAATTTTTAAACTTACTCGAACT
CGAAATTGTGAGGAGTTCGAGTAATTTGTTTACTCGAACTTGACTGTTTG
AGTAAGTTCGAGCAATTTCGATAAATTCGTCTAAAGTTCCAGTAATGGGG
TCTCTGGTTTCTTGATGAAATATTGTTTGATTGAATGAAAAAGCTGGAAA
AAGCCCGAATTTTGAGCTGTGTGTACACGGCGTGCGTGCGTACCTGTTTC
TCTTCGTTAGCGACTTTCTGTCTTGGTCTGGAAAATTACTGTTATGACCT
GTTTTCATTGACCCGCGGTCTGTAAAATGTACCTATTTTCCGTAGAACGC
CTCCTCGCAAAATTTGAAAATTTGTAGTTGGCTGAAGTTGGTCAAGCGGG
AAACACTGAACGGAAGAATCATTTTGGGTCAACTAAAAGATCATCTTTCA
GAATGAATACAGTTGATGTTCTTGCTGATGTTAAGTCATCCATGACTCAA
AGAAAAGCTAGACGTTATTCAGAACCGGGTAGAGGTAGGAGAATACGATG
TCCTGAAGAAATTCTACGTGATATACGAGGCTTGAAGCTTCGTCAAAGAG
TTTCACTTGTTTTGGGTGATGAATTACTCAAAGATGAACTCGAGCAAACC
ATTCGAAATAGCACTGTGAATGGAGTTACAAGAGCTGATACTATAAGAAC
TTTTCAAGACTTTTTGATCCCACAAGCTCAGCCAAACTTTGTAAATATTG
GAGGAGGTATAGGATCTGCTGGAACAGGAATGGTTGTCCTTCCAGTCAAT
GATATCAAAGGAAACGGAACAACAAGTTACAACATAAATGAAAGACAGCT
AAGAAGTAAATTAGCTGCAGTTTATCGCTTGGTTGACTTATTAGGATGGT
CTGAATCTATCTACAACCACATTTCTGTAAGATAATCTTGTTTTATTTAT
ATACATTTTCAATGTTTGTGTCTGGATGTTTTTATATTTCATTCATAACA
TTTGACAGTTAGCTTAGTATTTAGTGTTTTTAGTGGATCTTTAGACATGT
CCACAATGTTTGTCCAACACTTTATGTGAGCTGTCATGTTGTTTTTTTAT
TTCTATTCTGGGTTATATATAATTGTCAGAACCATCTATACACATGGTTG
ACAGTTGATGCTGAGATTACCCTAAAGCTTTGATGTTTGATAAAAAGTAA
TCCAGCTTTTATAATTTGATCCCTAATCTTTTTTCAACTTCCTATTTACA
AAGTGTCTGATATTGACTGAAGTCATTTTTGTGCTAGATTTTTTATGCCA
CAAGAAGGTTTAATTGTTATTAGCTACTATTTGAAAAGTTATTTCAAAGT
ATCAATAGATCACCATGTCAATTATCTGATGCCATGTCATGAATGAGAGG
AAATAAACAAACTGTGATGTTTTATTCAAATATTATTAATCTGATTTAAA
AGAAATTATAAACAAGTGAAGGGTTGTAAATGTATGTTGTTTTCTATCAT
GAGAAAAGGCTTAGAAAGACTTATGTTCATTAGAATATGCATGCCTGTCT
TGAAAGTCAAAGAAAAAAGTCTTATTCATTATTTTTCATAAAGGTGCTAA
AAACAACAGCTTTAGAACATCTCAGTAAAATATTCACCCAGACATCCAAA
ATCTTAGACATTCAATATATTTAGATTTTGTTTTATAAAATCTCATCCAA
ATCACAATTTTACATAAAAGTGGGGAGATAGAGTAAACTTTGAGAGACTA
GGAACAAAGCACTTTCAAATGATAATCCCTATTTCTAAAACTAACTTCAA
AGAGAAGAGTACATGACAATACAATTGCAAGCATCATTCAGGGCTTTTTG
TTAAGTCCTTTAAAAAATTTCACAAATTTTGGTATGAAAAGCTTTTTTAT
GAAAAAAATTGCAGAGAGAGCAGGAAAATGTGCACTTTAGTCTCTGACAG
GTTCTGCTTTACCTTTCTAGAATATGAAACATGTATATACCATTGATTGT
CTTAATACAAGATAAAATTTCACAAGCCAAAAAAATTTTCTGGATTTAAT
TTTGCGAGTCAGAGTTTTCAAAAGTTTTGTGAGAATTTTAGTTCGCGAAT
GAGCCAGAAAGCCAGCAAAATTTGGTCTTTTTTTGCTACTAATGGTGAGT
TTTGACTGAATTCTCCACCAAAAATGTGACTTTGACAAATTCGCGGTGGA
TTTACTTTCGTGAAAACGACAATCACAAAATTTAATCTCGCATAAGTTTA
TCCGATTAAATTACTATATATGCTATCTATCATAAAAGAACACAATACAA
TAAGAGTATTTTTTATCAAATTTATAATTTTTTTAGGAATATATGCTAAT
TATGAGGTCATCTTCACACCATATTTTGCACTTAAGTTGTTTCAGCTTTC
TGCGGGTGCCACAAGAATATAGTTTTATCTTGTATTTAATATCCCTTTGT
TCGATAACTATTATTGGCAAGCTGGTGAAGGGATGAAAGAGGATATCAGA
AAAGTCAATATTTCTTGATTTGGTACTTGCTCTCACACTTTACTTAAAAG
ATTTCTAGTTAAACTGGTGGAAATGATTTCTTTTCCTTTTCAATTTCTAT
TGTTAAATTAGCAATAATTTAACAAAATGTTCACCAATATTCCGCGAATG
AAAATTAATGAAATCTTCACATAACTTATCTTATTATTGATTGCTTTTAG
GTTCGACTATCGAATGAATCAAATGAATACCTGATAAATCCTTTTGGACT
CCTATTCAATGAAATTACAGCCTCTTCACTNATACCTGATAAATCCTTTT
GGACTCCTATTCAATGAAATTACGGCCTCTTCACTCGTTAAATGTGATGC
TAGTGGAAATGTTGTGGATGAAGGCAGCACAACATTAGGTAACAATGGTA
TTCAGTATTTTGCAGAATTGTGCGAACTCTTTGAATAAGGTCCTGTTTTT
TGTCAGCCTATTTCTTAAAAGGGAATTGTCATTTTTAGGCTATTTTTTAT
AAAGATGGTATGATTTTTGAAAATAGCACTGACTGATAACCAAATTTAAA
CCACATGAAATAGTTAGGAAGTTTTTCTCTTTAGAATATTTTAAGCTTCA
ACCTGAATGAAAAAGCTATCCTATATTGAAAAGAGTTTGAGGTTTAAAAG
ATATTCTAGATATTTTTTGGTGCTCAATTTTTAGGACTGAACAAGGCTGG
ATTTGTTCTTCACTCCACCATTCATGAATTTCGACCAGATTTGAATTGTA
TCATTCATGTGCATACACCTGATGTCATTGCTGTAAGGAAGTTATTCCTT
TTCTCTTGTTACGTCTAGGAGAAAATGGAATTTAACCATGTGTGTTTTTC
ATGATGGATTACTAAGATAAATCTGTCACATCCAAAATTTATTTCTCCCC
CATTTAATTGTTCCTCCTATTTCTTTATTTTTGAAAGTTATTATGTTTTC
TATTCAGTTTTTTTAAGGTTTTCTATTATTGGTGATAAAATGTAGACTTT
GTATTTTCATTACTTCTCTTCTTCCTTATAAAAAGCTCTGTGAAAACTCT
GCAGATGTTTTTTAACTAGCACACACACAATTTTATTCCACTGTTTTATT
GCTGTGAAGAAAAAGGGATTTTTCAAAAATATCTGATCTCCATGTAGAAG
AAAAAGGAGAAAAATTGAGACTTTTTCTAAATGTCCCAATCAGAGAGCTT
TATTTTTTTATCAACTGTAACTGAGCTATCATTAGCCCTTCCCCTAAATT
AGCTCAGTTCTGAAAACCTATTATGGTGACTCACCATAGAAGTCTATTCT
AAATAATCAATTTTAATAGGATGTCCTCTTAGAGCTTTCTGTACTATGTT
TTGGAAAAATCACTGTCTATTCCCTTAAATAATTCATTAACTTTTTGTCT
AAAAGCCTAGGATGTTTATTTTCTCAAGCTTGTTTTTATAAATCTTTTGA
TAAGGCTTTTCCATAAACAAACTCTTAATGAGTAGGTGTGTCAGTCACTA
AGGTCAACTTTGACATGAAATATGAGCAGCCTGACCTCTTGAAGCAGTTA
AAAATGCAATATTAAAAAAACAGTATCCTTTAGAATTCAATATTCATCAA
ATCTTAGCATTTTCAAGGTTTTATTATGATTCCAAAATGCATTGTTTTTT
TCAAGCAATTTCTTCCCCACATTAGACGATGGAATCAAAAAACTCAACTC
AAAATCATATAGGCAAAAATCTCAAATTAGCAAAAGATAATAAACATTTT
CATTTGTTTCTTCAATTCAAGAGAGCTTATTGGTGATGAATTTCAAAGAC
ACGTTCAATTGCTGACTATTTCAAAGTGCCTGCTTAGGCAAAGATGTGCT
TAGCCTGGCCCCTTGATTTCTATCAGTATCAAGCCTTCTCTCGTACTCTG
TTAGTGAAAGCTTAATATCCCCACACCTTAATCCTCATTTTAATGGCTTT
TCTGAAATTTCATTCATAAAAATGATAGAATTGTAAAATTTCCTTCAGGT
ATCATCAATGAAATGTGGCTTACTAAGAATCAGTCAAGAGTCGCTCGTTG
TAAGTAATGTTATACTCGTCTCTGAATCTCAAAATGCCAACAGCCTTTGT
GCAAAGTCTTCTGAAAGAGACAGTTTTTAACTTTTTACACCTCTCATTAT
AGCTTGACAGGTCTGAAATGAAGAATTCATCATGTAAAATAAAATTTGTC
CTAACTAATGTAAATGTTTTTAGGTTGGAAATGTTTCATATCATGATTAC
AAAGGGATTCTCATCAATGAAGAGGAGAGAGAAAGCATCCAAAATGATCT
TGGTACAGAGAACAAGGTAATCAAAGACTTCCCATGAAAAAAGGCTTGTG
GGTGCCATGATAAATTCTAGTATTATAAAAACAGCTAGAAATTGTGTAGG
TGCTGGCAGATAATAATAGGTGTATGCCATCTTTAAGCACCTAAACGGCC
TGGCATTGCTACAGCATTTTGTTTCAAAAATTATTGAAAAAGTAATTTAT
TTGACTGGAGTCACCCACTTGATGAATACTTGATGGGTGGTCGGTCAAAA
TATTTCATAAGGTTTATCTAAATTTTTGATACTTCAATTTAGATGAGAAT
TTTCCTTTCTTTAGATAATGATATTGAGGAACCATGGTGCTGTTATTTGT
GGCGCTTCCATTGAAAGTGCTTTCCATGATTTGCTCAATTTTATGGATGC
TTGTGAAACTCAGGTAACAGACATTTTTCAAGTCATAAAGTTTTCATTTT
ACTAGAGCTTTCTGTTCGCTCTTTTGGCTTTTGGCATAAGAAAGGCTAAA
AATTCGATTTTAATTGAAAGATCCCTAAAATGGAATTTGATTTTGAAAAC
TGAACTCCAGTAAGGAGATTGGATGTCCAAAATTTATTGAAAATAATAGT
GAAAAACTTTCTACACCTGACAAAAGGAAGTAACCCACATTTTTATGAAT
TTCTTTTCGACTGAAATGGCTTCTTTGGGTCAAAACTTAACTTTTTTGCG
TTGCCAATCTGGAAAAAAATTTTTGAATAAAGAAGTAACTGACAGTTTTC
TGGAGAATGTTTTCTGACAAAAAGAAGTAAATGACTGTTTTGCTTCTTTT
TGTCAGAAAAAGGTATCACTTACTTCCTTTTGTCAGAAATATTCTTCAAA
AAACTGGTCAGTTATTTCTTTCTTCAATTTCTTTTGGTTGAGGTTTACTG
ACAAAACAAGTGTCTTGTTTTTCTCTGCAACAGTGAGCATTGTGAGAAAA
GCAGTGATGCTCAAAGCTAATCTTCAATGAGTAGAACAATAATCAGTCAT
TTGTTTTTTGATATGTACTATCTGCATTCGATGCCAGCATAAAACGTGTT
TGGTCGATTTTCTCAATTTCGACTTCATGTTACTTCTTTTTGTCAGAAAG
GGGCCCGGGGGGGGGCAGCTGGGCAAAAGGACCGCCGGGTATGTGCGGGT
CCTAAGGGTACCTTTTCCAATATGTTTAAAATGCACTGTAAGGGTCGGAA
AAACTAGAGATGCACTGTAAGGGTAGAAATTTCAGAAAATTTTTGAAAAA
TCTAGATATTTTGACCAAAAATGCTAGAATTTTGACCAANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNACTGATTTTTGCTGCACTGTAAGGGTGCAATTTTAAAAGCCAATTTTT
GGCCCGCACATACCGTCAGTCCGCAAACCCAGTGCCCCCCCCCCGGGAAA
GGGGCAGACCTTCTTAATATGCACCTTTGTCTCAACAGAATTCTTCTTTA
GAGCATGGAGGTATAAAGAAACAGGATATGTAAGCTATTCTAACTAAGCT
CGCCCTACGATTAAATAAGTTACGATGTATGCATGCTCATAATCTCATAT
ATGGTGCATTTTTAATGAGGTCTTTTATCCATAGTTGTGAAATCTTAATG
GCTCATTTAAGCTTTAGAAATTAGATGAGACGAGATTTATTGTTTCTGAC
ATCAATGTAAGAAAATATTTGGACTAAAAAAGCAAAAACATGAACGAAAA
AACCGACAAAAAGCAAGAAAAACAACCATTTGAAGAAGCTAAACAAAACN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTTCTGACGACTGGACGACAGATGAA
GAATTAGACAATTTATAAATCTAAAATTATTTCGTAGAGGTCGATAGACC
TGTGAAATATAATTCTATGAATAATAAAAAAAAAGGCCTGTAAACTTGGC
AATTCTTCATCAAATGATAAGATTTTTCGATCAATGTTTTCTTTAAGGTG
ATCTCTATTGCTTGATACTTTCCTCCAAAATTCTCCAGTGACTTTATGTT
TATAAAATCTTCTGTCTGTGTGCTTATAAAGATATTCATTTTATGGCTTG
AAAAATATCTTTTCAAAACAAAATTTAACGCGTAACGAAATTAAACATAA
ACTTGTTTCGTGGACGAAGTTTTATTTAATTTTCGTATATCCCCATGAAC
GGTTTTTTTTCTGGAAGAGCCCAATCTGGAGTTCTACAGTATAGTAAAGT
CGTATTTTGTCGGGCGAGCCTAGTATTTTCTTTTGATGTATTTTGATGAT
TTTTACCTGATTTTTTAAAGAGTGGATGTGGTCTATGATATATTATCATA
TATTATTGATATATTATTTATCATGCCTCGATTCAATATTTTTAGGTAAA
AGCAATCCCAATCGGGCTGGACAACTTGAATATTGTGAGTGAGGAAGCGT
TCCAACAAGTCCAAGATATCCAAAGGAACAACTGTAAGATCAATGTAACA
GCTGAAGGGAAGCCGCAAATGAGTCTTGCTGATCTAACCTTTGAAGCATA
TATGAGATGGATGGACTCCCAAGGTTATCGCACCGGTTATGCCTACCGAG
TTCCAGATTTGTTCACATCTCCACAAAAGAAGAAAATCCCAGCATCTCAA
ATACCACCACACATGTCACCCGAGCAAATTAACCCTTACCAAGCGCTGTA
TGATTTGAAAGGGCCATCGATGAGTCGAGGTAATACGCATCGTAACCGCT
TCAAATGGTTGAACAACCCAGTCCAATCAACACAGTACAAGAAGGAATTC
ATTCAAAAGCAGCAACCACAAATTGAGGTAAGTTTTACTTCTTTGTCATA
TTCACCAGGAAGTTATGTAACTTTAAAAACAAAATTATCATATACCTTAC
TACCAATTGTCCCACTTTTTTCCGTGTTAAAATTGCACCAAAACCCATTT
GTGTAGATTTGAATCCTTGTGAAGCGAGATGAAAACCATTCTTTTATACT
ATTTCAGCCTCCTATCTTGGACGAGGAACCTCCCATGACGAATGGACACA
TCGACGAACAAGTTACCACAGAAGTCTCCACGCACAACGATACCAAAGTT
GTCACCAAGACGACCACAGTGACTGAAACACAAGTTATCACTGAAATCTC
CGCTGGCAACAAAGACGCAAAGAAAGAAACGATAACTGTGGTTAATGGAA
GCACCAGTTCTCACAGCATAAGCCCCACAGAGGAAAGTAGAGAATCTGTG
GTTCAGGAAGCACCACAACCCAAAGTGGAAGACAAACAACCAGTGGCCGC
AGCCAGCCCCACCAGAAACGGCTCTGCTCCCGATATTTCATCGCCTTCCC
ATGAAAGTGTAAAGTCACCAAGTAAAGTGAAGAAATCTAAGAGTTTCAAG
AATATGTTTGGTAAAAAGAAAGATAAAAAGGAAGGCAAATAGTGGGCTTA
GGATTGCCCTAATACTTCTTTCAACATCGAAGCGTATAATAAACATGAAG
AGCTCAGATATTTTCATTCATGAGTTATGGGTAAGGAAAGTTATATCACA
ATCTTATCCTGACCAAGATGGTGAGACAAGAAGAGATGAGACATTCGTTT
AAAAAAATGATCATGCATACAAAAGGAACTTCTTTATTTATTTAACTTTT
CTGAATTGAAATGTATAAAAGNGATGAGACATTCGTTCACAAAAATGATC
ATGCATACAAAAAGAACTTCTTTATTTATTTAACTTTTCTGAATTGACAA
AAGTATATATTTAGTAAGTATTAATATTCGTGACCAATTTCCATCTTTTT
AAGACACATCGATGAATAAAGGGAATTTTTATTTTAGGCGATAGTGTTAA
AACATTTTATAACATAGTTTTGTTTCTCAATCACTTTTAAGAANTTATTT
TAGGCGATAATGTTAAAATATTTTATAACATAGTTTTGTTTCTCAATCAC
TTGTAAAAGGAATCTCCTTTTTATTGTAGCAGGATAGGTCACGAGCCAGC
CTTTTTGATATTGAAAGTATTTTTCTGAATTAGAATAGTCTGAAAAGGAG
GGGTCAAATTTATTATTTTGAGCTTTTCATTTTTATCATAGATGTTTAAT
TTTATTTTGTAAAATTTTATCTCAAGAAATTATTATAATTAATCTATATC
AAATAATAGAGATTTTATCGCGTATTATTATCCTTTTTTATTCACTTTTT
ATTTTTGTATGAAATTCTTTAGTGTACATATAGCTTTATTTGTGAGTTTT
GTTTTAGTATAATTTTTACGTTACTTAATAACATCGACCGAGTGGCCATT
TTTCGCCCCTAACAAACAGGCTATTAAAAATTTACGTTATTTTTTGCACT
TAAAAAAGTGAATTAATATAAATAATAAGTAGAGCATTGTCTAAAACAAA
AGATAAAATTAATTTATGGAATTATATTTTTCACGCTTTCTTTCTTTGAC
CTGGAATTTTTTTCTCCCTTTTCCCGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005190XLOC_005190Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009279-exon-sc0000091-1575043694:271463..272488TCONS_00009279-exon-sc0000091-1575043694:271463..272488Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1575043694:269501..269688TCONS_00009279-exon-sc0000091-1575043694:269501..269688Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1575043694:269107..269204TCONS_00009279-exon-sc0000091-1575043694:269107..269204Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1575043694:267840..267890TCONS_00009279-exon-sc0000091-1575043694:267840..267890Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1575043694:267573..267665TCONS_00009279-exon-sc0000091-1575043694:267573..267665Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1575043694:267176..267274TCONS_00009279-exon-sc0000091-1575043694:267176..267274Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1575043694:263262..263693TCONS_00009279-exon-sc0000091-1575043694:263262..263693Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1575043694:262497..263081TCONS_00009279-exon-sc0000091-1575043694:262497..263081Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1575043694:262252..262408TCONS_00009279-exon-sc0000091-1575043694:262252..262408Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1575043694:261611..262185TCONS_00009279-exon-sc0000091-1575043694:261611..262185Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1510915933:271463..272488TCONS_00009279-exon-sc0000091-1510915933:271463..272488Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1510915933:269501..269688TCONS_00009279-exon-sc0000091-1510915933:269501..269688Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1510915933:269107..269204TCONS_00009279-exon-sc0000091-1510915933:269107..269204Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1510915933:267840..267890TCONS_00009279-exon-sc0000091-1510915933:267840..267890Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1510915933:267573..267665TCONS_00009279-exon-sc0000091-1510915933:267573..267665Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1510915933:267176..267274TCONS_00009279-exon-sc0000091-1510915933:267176..267274Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1510915933:263262..263693TCONS_00009279-exon-sc0000091-1510915933:263262..263693Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1510915933:262497..263081TCONS_00009279-exon-sc0000091-1510915933:262497..263081Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1510915933:262252..262408TCONS_00009279-exon-sc0000091-1510915933:262252..262408Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1510915933:261611..262185TCONS_00009279-exon-sc0000091-1510915933:261611..262185Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1491911889:271463..272488TCONS_00009279-exon-sc0000091-1491911889:271463..272488Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1491911889:269501..269688TCONS_00009279-exon-sc0000091-1491911889:269501..269688Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1491911889:269107..269204TCONS_00009279-exon-sc0000091-1491911889:269107..269204Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1491911889:267840..267890TCONS_00009279-exon-sc0000091-1491911889:267840..267890Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1491911889:267573..267665TCONS_00009279-exon-sc0000091-1491911889:267573..267665Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1491911889:267176..267274TCONS_00009279-exon-sc0000091-1491911889:267176..267274Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1491911889:263262..263693TCONS_00009279-exon-sc0000091-1491911889:263262..263693Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1491911889:262497..263081TCONS_00009279-exon-sc0000091-1491911889:262497..263081Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1491911889:262252..262408TCONS_00009279-exon-sc0000091-1491911889:262252..262408Clytia hemisphaericaexon
TCONS_00009279-exon-sc0000091-1491911889:261611..262185TCONS_00009279-exon-sc0000091-1491911889:261611..262185Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000091supercontigsc0000091:261611..272488 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.06492	1.91023	0	0	0.872747	0.230355	0.556038	0.771115	0.539233	0.663127	0	0.564193	0	0	0.121941	0.132109	0	0.3302	2.39923	0	1.03667	0	0	0.44711	0	0	0.582406	0	0	0.24375
Blast
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BLAST of TCONS_00009279 vs. Swiss-Prot (Human)
Match: ADDA (Alpha-adducin OS=Homo sapiens GN=ADD1 PE=1 SV=2)

HSP 1 Score: 231.876 bits (590), Expect = 8.552e-64
Identity = 115/241 (47.72%), Postives = 163/241 (67.63%), Query Frame = 2 
Query: 1109 YLINPFGLLFNEITASSLVKCDASGNVVDEGSTTLGLNKAGFVLHSTIHEFRPDLNCIIHVHTPDVIAVSSMKCGLLRISQESLVVGNVSYHDYKGILINEEERESIQNDLGTENKIMILRNHGAVICGASIESAFHDLLNFMDACETQVKAIPI--GLDNLNIVSEEAFQQVQDIQRNNCKINVTAEGK---PQMSLADLTFEAYMRWMDSQGYRTGYAYRVPDLFTSPQKK---KIPAS 1807
            +LI PFGLL++E+TASSLVK +  G++VD GST LG+N+AGF LHS I+  RPD+ C++H+HTP   AVS+MKCGLL IS E+L +G V+YHDY GIL++EEE+  IQ +LG ++K++ILRNHG V  G S+E AF+ + N + ACE QV+ +    G DNL +++ E ++      ++    +   EG    P+  + +  FEA MR +D+ GYRTGY YR P L    +K    ++PAS
Sbjct:  180 FLIVPFGLLYSEVTASSLVKINLQGDIVDRGSTNLGVNQAGFTLHSAIYAARPDVKCVVHIHTPAGAAVSAMKCGLLPISPEALSLGEVAYHDYHGILVDEEEKVLIQKNLGPKSKVLILRNHGLVSVGESVEEAFYYIHNLVVACEIQVRTLASAGGPDNLVLLNPEKYK-----AKSRSPGSPVGEGTGSPPKWQIGEQEFEALMRMLDNLGYRTGYPYRYPALREKSKKYSDVEVPAS 415

HSP 2 Score: 107.071 bits (266), Expect = 1.713e-23
Identity = 60/156 (38.46%), Postives = 93/156 (59.62%), Query Frame = 1 
Query:  658 EILRDIRGLKLRQRVSLVLGDELLKDELEQTIRNSTVNG--VTRADTIRTFQDFL---IPQAQPNFVNIXXXXXXXXXXMVVLPVNDIKGNGTTSYNINERQLRSKLAAVYRLVDLLGWSESIYNHISVRLSNESNEYLINPFGLLFNEITASSLI 1110
            ++ +D   ++ ++RVS++L      +ELE  I+     G   T    ++   DF+   +P   P     G    +   GMV  PVND++G+ + +Y+  E+ LR KLAA YRL DL GWS+ IYNHI+ R+++E   +LI PFGLL++E+TASSL+
Sbjct:   44 DLRQDFNMMEQKKRVSMILQSPAFCEELESMIQEQFKKGKNPTGLLALQQIADFMTTNVPNVYPAAPQGGMAALNMSLGMVT-PVNDLRGSDSIAYDKGEKLLRCKLAAFYRLADLFGWSQLIYNHITTRVNSEQEHFLIVPFGLLYSEVTASSLV 198
The following BLAST results are available for this feature:
BLAST of TCONS_00009279 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ADDA8.552e-6447.72Alpha-adducin OS=Homo sapiens GN=ADD1 PE=1 SV=2[more]
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