TCONS_00009319 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009319
Unique NameTCONS_00009319
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length257

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009319 ID=TCONS_00009319|Name=TCONS_00009319|organism=Clytia hemisphaerica|type=transcript|length=257bp
NATCATTTTAAgctggaaagctcttttcaaaaaatttcttcactgaatAC
TCATCAAACCAGTCAGGTTTCATaagttaaagtaaaacatttcacaaaaa
ttaataaattatccaaaaatcaaCTAAAACATGTTGCGCTAAAGTTACGT
CAATATAGCAAACTTTGCGGTAATCTTGcgataacatcaaatttgggtga
aaacagCCACATAAGTGTGACAAAATGTTCATTGAAATTCCAGCATGACT
CTCTGNN
Run BLAST on NCBI

transcript from alignment at sc0000091:425610..425866

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009319 ID=TCONS_00009319|Name=TCONS_00009319|organism=Clytia hemisphaerica|type=transcript|length=257bp|location=Sequence derived from alignment at sc0000091:425610..425866 (Clytia hemisphaerica)
NNCAGAGAGTCATGCTGGAATTTCAATGAACATTTTGTCACACTTATGTG
GctgttttcacccaaatttgatgttatcgCAAGATTACCGCAAAGTTTGC
TATATTGACGTAACTTTAGCGCAACATGTTTTAGttgatttttggataat
ttattaatttttgtgaaatgttttactttaacttATGAAACCTGACTGGT
TTGATGAGTattcagtgaagaaattttttgaaaagagctttccagcTTAA
AATGATN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005211XLOC_005211Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009319-exon-sc0000091-1491911889:425610..425866TCONS_00009319-exon-sc0000091-1491911889:425610..425866Clytia hemisphaericaexon
TCONS_00009319-exon-sc0000091-1510915933:425610..425866TCONS_00009319-exon-sc0000091-1510915933:425610..425866Clytia hemisphaericaexon
TCONS_00009319-exon-sc0000091-1575043694:425610..425866TCONS_00009319-exon-sc0000091-1575043694:425610..425866Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000091supercontigsc0000091:425610..425866 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
34.9069	29.8791	12.3987	9.34259	19.2145	9.52088	27.2916	21.94	23.9805	37.4257	29.2109	22.4778	22.8754	15.6608	12.6563	22.7353	18.3006	18.1238	21.233	15.5188	52.079	60.3018	38.4412	44.9233	0.762714	8.56102	98.6686	97.0466	129.57	108.425
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009319 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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