TCONS_00009330 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009330
Unique NameTCONS_00009330
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length294

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009330 ID=TCONS_00009330|Name=TCONS_00009330|organism=Clytia hemisphaerica|type=transcript|length=294bp
ggactatataataaaatacaggtaaaaaaaactgaacaattaaaaaaaat
aaagggCACTAATGTCagacaaaatggtaaaaaacaaatgaactttCGGT
GTGTATGAATGAACTTTCGGTGCGTATGAATGAACTTTCGGTGCGTATGA
ATGAACTTTCGGTGCGAATGAATGAACTTTCGGTGCGTATGAATGAACTT
TCGGTGCGTATGAATGAACTTTCGGTGCGTATGAATGAACTTTCGGTGCG
TATGAATGAACTTTCGGTGCGTACGAATGAACTTTCGGTGCGTA
Run BLAST on NCBI

transcript from alignment at sc0000091:521590..521883

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009330 ID=TCONS_00009330|Name=TCONS_00009330|organism=Clytia hemisphaerica|type=transcript|length=294bp|location=Sequence derived from alignment at sc0000091:521590..521883 (Clytia hemisphaerica)
TACGCACCGAAAGTTCATTCGTACGCACCGAAAGTTCATTCATACGCACC
GAAAGTTCATTCATACGCACCGAAAGTTCATTCATACGCACCGAAAGTTC
ATTCATACGCACCGAAAGTTCATTCATTCGCACCGAAAGTTCATTCATAC
GCACCGAAAGTTCATTCATACGCACCGAAAGTTCATTCATACACACCGaa
agttcatttgttttttaccattttgtctGACATTAGTGccctttattttt
tttaattgttcagttttttttacctgtattttattatatagtcc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005222XLOC_005222Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009330-exon-sc0000091-1491911889:521590..521883TCONS_00009330-exon-sc0000091-1491911889:521590..521883Clytia hemisphaericaexon
TCONS_00009330-exon-sc0000091-1510915933:521590..521883TCONS_00009330-exon-sc0000091-1510915933:521590..521883Clytia hemisphaericaexon
TCONS_00009330-exon-sc0000091-1575043694:521590..521883TCONS_00009330-exon-sc0000091-1575043694:521590..521883Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000091supercontigsc0000091:521590..521883 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.832546	1.2178	0	0.461119	0	0	0.535185	1.00207	0	0	0	0	1.75986	0.312033	14.8915	21.0641	4.06243	3.84356	4.86758	6.01968	0.804953	0	0.954581	0.433926	0	0	0	0	0.462031	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009330 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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