TCONS_00009400 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009400
Unique NameTCONS_00009400
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4614

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009400 ID=TCONS_00009400|Name=TCONS_00009400|organism=Clytia hemisphaerica|type=transcript|length=4614bp
CTTATAGCTCTCACATatccggcacccattttgcctgaGTATTCCTCCCC
CAGGCTTACTTTAACATCATAGAAATTTATTTAcagcaaaagaaaaaata
caaaaatatgtCAATTAACATTAAGATTAGATCATGCTATGACGATCTTA
CGGAGAAACCTACTTCTAACACGAAGAAGCTACCTATTTATAAATGCGTA
TTGCTTGGAGATTCAAAAAGTGGGAAAACCAAATTCTTCTATCGTTTTAA
AACGAAACGATTCATAGAAGATGATGACCGAACTATGAAGCCATTGCACC
CAAACGAAATTCAATATTGTAGTCGAGACTTTTCTATTGGTGATTTCGAG
GGAAGGATTCAACTTTGGGATACACTTGGTATCGAAAACAGTGCAAGTCT
CAGTAAACAGTACCTTCGACAAAGCAAAGGTGTTTTATTGATATATGATA
CAACCAATGACCATTCTGGCGAAGGCCTTAAAAAATGGTATAGAACAGCT
ACAGAACACATTGAAAAAGGCGAATGTTTGTATTTCGTGATTGGCACGAA
GACTGATCGAGAAGGAGATAAAAGCGTGTCATTACAAGCTATGAAGGATA
GATTAGAATATGCGAATATTACAGaatattttgaagtttcaacAAGGACT
GGAGACGAATTTGATGAATCTTTGGGACGAATCATAGAGAGGGTATTAAT
GAAGTTGGAAGGAGTTTTAGAGGATGAAAGCCAAAACCCAAGTGGTCGTG
GTGAAGAAACGAAGAGAAAATGTTGTTAGCATAATACTCATCAGGGGTAT
TTTCCCCCTACCCTCAGTAGCATGGTGGgttgactaaaatttgggcgaGC
TGGGAAGGCAATTTTGGcaacattttgattttggcgccccctatgAAATG
TAAATAtctttgttttaaaaataactcGAGCAAAGCAAGCAATgaaattt
tggggtattttctctctttttggccgaaaactgccatacctaaggtgtaa
aaaagcaaaGGGGCTCCGAATTTAGTAATCAAAGGCGTCTTTTTGTACCC
TTTGTATTTCGACGCCCCTTTGAAAAGCCTACACTgtgggaggggggggg
ggaaatgaATTCccgccaccacgctactgcttACCCTTGCAAGTTTTTGA
CGTGATCAATTCCGATTAGTCAATGATAGTTCTTATCGTGACAAAGCACA
TACAGCCCTACTAATTCTTGCTAATCTCGACGACAACTTTGAAACGAAAA
ATCGTGGACAAGGCACTCTTAGTGTTTTTTTataccccctaagaaaatag
cGCAAATGCGCAAATCTCCTAATTTTACGCATGCCACGATTTTTCCATTT
AGCCAAAGTCTGtacaaattttctgaaaattttctcgatctaaaaatttg
caaaaatcggATATGGAGatgaatttagaaaaattattttgggcctCATA
AAACATTCTTATACCCCTTCTCACAGTCACAGtaaatttttttcagccag
ttgggatgaaaataacggactataaaactcgatggggatttattttccca
tgttttttatgactggggattttATTCCATTGCTTTCAAGTTAATATATA
GTAAATTCAATGGGgagggaaaaaatagcacattaTTTTAttgtgaggat
ttgtttatttgattactttcaacggggacaaaaattggaggataattttc
cactggggacgatctTTTAGCCAATTTTCAAATGGGAGGGAGCCCCACCG
GTTTCGTGAGAAGGGGGTATATTATTGATTATATGATATTGTAATATTGC
TTATGTGAGCCGTGTATGGAATAGAATTTAGTTTTGGATTCATGCATCAT
GTTACTTATTCAAATGTTCCCAAGGAAGAGAAATTAAATATGtatacacg
tttcttttataagaacaaactatataagaacataaggctttgatggctga
aatattaagaacatgttaggaacattctaaggctttgcagattctaaaac
acccaatttcgtaggaaaatgggcaaaaatactcacaatactttcaaaaa
tagtgaaaatacgaacatcttaaaaacaattttagacttaaaactaaAAA
CGGTATAAACAACATccgaagttttcaaaaaattaagggTGTTCATATAG
AAAACGCGTAAATATGTATATTTGATTTACCATAGCAAAGGCAATAGTGA
TATGGATGTTGGTAATCAGTTATTTAGGATATTTAAAACAACAATAACAT
GATATGCCGTTTTCTCGTGTAAACTTTTAAATTCCatgttttttgtaaga
acatccaaagatttttgaatgttcttaccttttttgagtttcaagcctaa
aagttaatgttctgaaaattttctgaaaatgttcaccattttttgattat
ttatgTATAGTACTATTTTTGTATTTCCTAAGATATTTGGTATTTTAGAG
TCCATAAAAAAGCCtttagatattcttaacttgttcttaacattttggcc
atcgaagccatatgcttttaaacagtttgttcttataaaaagacaagTGG
AGTGCGAtacccaaataaatttttcgttAACATTAATTTTGTTTGTTGTA
AATTTTATATGTATAAATTATTGAAACAAATTTACAGgaaatttctcatt
tttcattttatagaaaaaaattaatggaaTATTTGAAAACCgagtaattc
tttttttttatgaacCAGCTCCAGACTTTAGGAAGATGTTTCACTGCACC
AAGAAACTTGTTTTCAGATATCTCGTACTAGGGCTGTTATTTTTTGAACA
AGTTATCCTAGATTCGACTTTTACCAAAGCAGTGCGTAATAAGAAACTGC
AGCATAGAGATAGAGTCGTGTTAAAGGAGCCTACAATAGTACGTTGTTTG
GCCTCTTGTGAGTATGTGAATGGTTGTAAATCGGTTAATTACCATTACGG
AGATAAGATTTGTGAGGTTATGCGCCACACAGCACAAAATGAAGGAGATA
ATACACTAGAAGAGGCACATGGCTGGTACTACTatgagaaaaatgagaaa
atgTTTGACATGTCAAAGATGTTTTTGAAGACAAATGACAGTCGCTTTGT
GACAATGGACACTCAATTGGCCAATACTCCTTCAACATTTCCTGAAGATT
GGTTCATAACATTCAACGTCAAAATCGACATGTCAACAGGTGACGGTCAA
ATCTTACGGATGACGAAAAACAATGACGTTATTTTAGACGTCAAAAAGAT
GTCGTCTATTTTAAAGATTACTCATGAAAGAAATGGCGAAAAATTTGAAC
TAATGACAAACTCTCTTGATGTGAGCCAAGAAATTCATCAAGTTATGATA
GGCTTCCAGACAGCAAACACACTTGACAAACAGCTTTTCGTGGTGACTGT
TAACGGCTATGTTAGTTACCAAGGTCGCCATAGAAATGAAACAGTCGCAG
TACGTCGTGTTGCTATGGATATATCGAACCCTCGAATCTTCTTTGCTGAA
AAGATTATTAGCAACATAGAGTTTAATACAGATGcacACCGTTTGGTCAA
ATCAAAATTATGGGATCTTGTTCCTGATTGgccaaaagaattttttcttg
aTATCACATACTTAATGATCGAGCCATATACAGgacATTATTGCAATTTG
TTCCATATAACAACTGGTCGAAATCATGAGGTCTTTGGAAGTCGAATTGC
GGTGGTCTTTCTTCGTGGCAGTAACTCATACACTGTAGAAATGGAAAAAG
GGACTGAAAAAGCAACACGGTGGAAGAGTGGGTACCAGTCTACTCAAACA
TGGGGTCGAATAATGAGGATGAGGGTGGAGCAGGTTTTGGAAAACGGAGA
GTACATATTGAGATTTCGTTTGAAtggaaatgaaaatgttttacaagCAT
CAAATGGTATGGATGCTACAAATCACACTAATGTCAGAGTGTATGCATCA
GATGGTTGGCACACACAAGTTTCGGCCACCACTGTTTTGCTCAAATTGGA
TTATACTAAAAAGTCTCCATAAAATCATAACAGTTATTGTGGGCCCCCAG
TgtaaaaattgcgtgaatgcatgaattgGGAANCCATAAAATCTATAACA
TAACAGTTATTGTTGGCCCCCTGTgtaaaaattgcgtgaatgcatgaatt
gGGAATgtttgcgtgaacaaaaattgcgtgaattgtgaaaaaacattgcg
tgaatgtgtgagtttgaaaaaaaaatgtgtgattgcgtgaattgaaggtc
cgatGGGGGCCTCTATTATGGtaataaataaagctttttaaactAATGTG
GTGAGCGTTTACTTACAAATAGCTGGCACACCACTGTTCTATTTGAATTA
GATAATACTTTGAATTACACTGTCGGGCTAGAGTAGAGCGATATCATGTT
GATATCACGTGAGTATAAGAAGAAAATCTGTCAGCGGGAGGGACTTTATA
ACAACTTACCCTCGCTCTCTAACGCAGCTCTTTTTCTAGGTGACCTACAG
CGGCCGTTAAGAGTACATTACTTTTCCAGAGTACACTGTGAGggtgtaaa
aaagtgaaaaaaaatgcgaggttttttattgcaaattttcggaaaaattg
tccacttttgcctt
Run BLAST on NCBI

protein sequence of TCONS_00009400-protein

>TCONS_00009400-protein ID=TCONS_00009400-protein|Name=TCONS_00009400-protein|organism=Clytia hemisphaerica|type=polypeptide|length=428bp
MFHCTKKLVFRYLVLGLLFFEQVILDSTFTKAVRNKKLQHRDRVVLKEPT
IVRCLASCEYVNGCKSVNYHYGDKICEVMRHTAQNEGDNTLEEAHGWYYY
EKNEKMFDMSKMFLKTNDSRFVTMDTQLANTPSTFPEDWFITFNVKIDMS
TGDGQILRMTKNNDVILDVKKMSSILKITHERNGEKFELMTNSLDVSQEI
HQVMIGFQTANTLDKQLFVVTVNGYVSYQGRHRNETVAVRRVAMDISNPR
IFFAEKIISNIEFNTDAHRLVKSKLWDLVPDWPKEFFLDITYLMIEPYTG
HYCNLFHITTGRNHEVFGSRIAVVFLRGSNSYTVEMEKGTEKATRWKSGY
QSTQTWGRIMRMRVEQVLENGEYILRFRLNGNENVLQASNGMDATNHTNV
RVYASDGWHTQVSATTVLLKLDYTKKSP
Run BLAST on NCBI

transcript from alignment at sc0000093:327991..339432-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009400 ID=TCONS_00009400|Name=TCONS_00009400|organism=Clytia hemisphaerica|type=transcript|length=11442bp|location=Sequence derived from alignment at sc0000093:327991..339432- (Clytia hemisphaerica)
CTTATAGCTCTCACATATCCGGCACCCATTTTGCCTGAGTATTCCTCCCC
CAGGCTTACTTTAACATCATAGAAATTTATTTACAGCAAAAGAAAAAATA
CAAAAATATGTCAATTAACATTAAGATTAGATCATGCTATGACGATCTTA
CGGAGAAACCTACTTCTAACACGAAGAAGCTACCTATTTATAAATGCGTA
TTGCTTGGAGATTCAAAAAGTGGGAAAACCAAATTCTTCTATCGTTTTAA
AACGAAACGATTCATAGAAGATGATGACCGAACTATGAAGCCATTGCACC
CAAACGAAATTCAATATTGTAGTCGAGACTTTTCTATTGGTGATTTCGAG
GGAAGGGTAAGTCTCCCAGCAGGTACACAACGTTTTTTCGACGTTTACCC
AACGTTCACAACGTCCATATAACGTTAGGTGAACGTTGAAACAACCTTGT
GTACCAGTTGGCTGTATAAAAAACTTCGGTCTGAAAGAAAGACTGGGGGT
ATTTATTTGACGTACAATGCCGGACAAAAGGTTGTAGACAAATGAAATTT
CAGTGAAAAATGATGAGAAATAGAGCAAAATGACTCTTCAATGTGTCTGA
AAGGGGATGGAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCTTTTGAGGGAA
CCACAAGCAAAAAATCAGCGTTTTGATACTGGTGTAAGCCAGTTAATCAA
GCCCTTGTGGTTTGCCCTTGCGGTTTGACTGCAGTATTGAAGTATTTTGC
AAATATTGCAGAAGTCTACAAACCTTTTGTCCAGAATTGTACACTTAGGG
TGCGGCCTTGAGTGCTCGACTCCCCCTTCCTGGAAAGTAATCATTTTGCT
TCTTTCTATAGCTTAGAAATTCGTATAGAATCGCGTTAAGAAATTTTTTT
ATTCACAATATTATCATTCAATTGAATATTTTCTTATGAAAAATGAGGCT
TAATTTTGACGATAACCTATGAACAAATTATTTAAAAACAATCTTTATTG
GGGTCTCAGGGGTACCTGATTCCGCCACTTCGTAATGCCAACCGTCTAAG
CGAGACAAAGTATCTAATCTCCGAGATTCCGCCTGAGTTTTCGTCGAATA
CCGCCACTCCACCCTAAAAAAAGTCATGATTCCACTCCTCCGCTAACCGT
GACCCCCGCCCCTATTTTTAGCCCCTTTTAATTCGATAAGTGAATAAAGT
AAGCGCGTTTTTTAAATATTTCCTTCCTTTATAGATTCAACTTTGGGATA
CACTTGGTATCGAAAACAGTGCAAGTCTCAGTAAACAGTACCTTCGACAA
AGCAAAGGTGTTTTATTGATATATGATACAACCAATGACCATTCTGGCGA
AGGCCTTAAAAAATGGTATAGAACAGCTACAGAACACATTGAAAAAGGCG
AATGTTTGTATTTCGTGATTGGCACGAAGACTGATCGAGAAGGAGATAAA
AGCGTGTCATTACAAGCTATGAAGGATAGATTAGAATATGCGAATATTAC
AGAATATTTTGAAGTTTCAACAAGGACTGGAGACGAATTTGATGAATCTT
TGGGACGAATCATAGAGAGGGTATTAATGAAGTTGGAAGGAGTTTTAGAG
GATGAAAGCCAAAACCCAAGTGGTCGTGGTGAAGAAACGAAGAGAAAATG
TTGTTAGCATAATACTCATCAGGGGTATTTTCCCCCTACCCTCAGTAGCA
TGGTGGGTTGACTAAAATTTGGGCGAGCTGGGAAGGCAATTTTGGCAACA
TTTTGATTTTGGCGCCCCCTATGAAATGTAAATATCTTTGTTTTAAAAAT
AACTCGAGCAAAGCAAGCAATGAAATTTTGGGGTATTTTCTCTCTTTTTG
GCCGAAAACTGCCATACCTAAGGTGTAAAAAAGCAAAGGGGCTCCGAATT
TAGTAATCAAAGGCGTCTTTTTGTACCCTTTGTATTTCGACGCCCCTTTG
AAAAGCCTACACTGTGGGAGGGGGGGGGGGAAATGAATTCCCGCCACCAC
GCTACTGCTTACCCTTGCAAGTTTTTGACGTGATCAATTCCGATTAGTCA
ATGATAGTTCTTATCGTGACAAAGCACATACAGCCCTACTAATTCTTGCT
AATCTCGACGACAACTTTGAAACGAAAAATCGTGGACAAGGCACTCTTAG
TGTTTTTTTATACCCCCTAAGAAAATAGCGCAAATGCGCAAATCTCCTAA
TTTTACGCATGCCACGATTTTTCCATTTAGCCAAAGTCTGTACAAATTTT
CTGAAAATTTTCTCGATCTAAAAATTTGCAAAAATCGGATATGGAGATGA
ATTTAGAAAAATTATTTTGGGCCTCATAAAACATTCTTATACCCCTTCTC
ACAGTCACAGTAAATTTTTTTCAGCCAGTTGGGATGAAAATAACGGACTA
TAAAACTCGATGGGGATTTATTTTCCCATGTTTTTTATGACTGGGGATTT
TATTCCATTGCTTTCAAGTTAATATATAGTAAATTCAATGGGGAGGGAAA
AAATAGCACATTATTTTATTGTGAGGATTTGTTTATTTGATTACTTTCAA
CGGGGACAAAAATTGGAGGATAATTTTCCACTGGGGACGATCTTTTAGCC
AATTTTCAAATGGGAGGGAGCCCCACCGGTTTCGTGAGAAGGGGGTATAT
TATTGATTATATGATATTGTAATATTGCTTATGTGAGCCGTGTATGGAAT
AGAATTTAGTTTTGGATTCATGCATCATGTTACTTATTCAAATGTTCCCA
AGGAAGAGAAATTAAATATGTATACACGTTTCTTTTATAAGAACAAACTA
TATAAGAACATAAGGCTTTGATGGCTGAAATATTAAGAACATGTTAGGAA
CATTCTAAGGCTTTGCAGATTCTAAAACACCCAATTTCGTAGGAAAATGG
GCAAAAATACTCACAATACTTTCAAAAATAGTGAAAATACGAACATCTTA
AAAACAATTTTAGACTTAAAACTAAAAACGGTATAAACAACATCCGAAGT
TTTCAAAAAATTAAGGGTGTTCATATAGAAAACGCGTAAATATGTATATT
TGATTTACCATAGCAAAGGCAATAGTGATATGGATGTTGGTAATCAGTTA
TTTAGGATATTTAAAACAACAATAACATGATATGCCGTTTTCTCGTGTAA
ACTTTTAAATTCCATGTTTTTTGTAAGAACATCCAAAGATTTTTGAATGT
TCTTACCTTTTTTGAGTTTCAAGCCTAAAAGTTAATGTTCTGAAAATTTT
CTGAAAATGTTCACCATTTTTTGATTATTTATGTATAGTACTATTTTTGT
ATTTCCTAAGATATTTGGTATTTTAGAGTCCATAAAAAAGCCTTTAGATA
TTCTTAACTTGTTCTTAACATTTTGGCCATCGAAGCCATATGCTTTTAAA
CAGTTTGTTCTTATAAAAAGACAAGTGGAGTGCGATACCCAAATAAATTT
TTCGTTAACATTAATTTTGTTTGTTGTAAATTTTATATGTATAAATTATT
GAAACAAATTTACAGGAAATTTCTCATTTTTCATTTTATAGAAAAAAATT
AATGGAATATTTGAAAACCGAGTAATTCTTTTTTTTTATGAACCAGCTCC
AGACTTTAGGAAGATGTTTCACTGCACCAAGAAACTTGTTTTCAGATATC
TCGTACTAGGGCTGTTATTTTTTGAACAAGTTATCCTAGATTCGACTTTT
ACCAAAGCAGTGCGTAATAAGAAACTGCAGCATAGAGATAGAGTCGTGTT
AAAGGAGCCTACAATAGTACGTTGTTTGGCCTCTTGTGAGTATGTGAATG
GTTGTAAATCGGTTAATTACCATTACGGAGATAAGATTTGTGAGGTTATG
CGCCACACAGCACAAAATGAAGGAGATAATACACTAGAAGAGGCACATGG
CTGGTACTACTATGAGAAAAATGAGAAAATGGTATGTTTTTTTTCTCCAA
ATTTTCGTCAAAAAGCAATAACTTGGTAGAAAATCCGTCGGCATGATAAA
GTATTACAGCCGATTATTTCTCAAAGTTTTCCACAGAAACTAAAGGAAAT
GCAAGTTGTTCTCATGATGTTTTTATATTTCTTCTTAATTTCTTCTCATT
TTTTAGTTTGACATGTCAAAGATGTTTTTGAAGACAAATGACAGTCGCTT
TGTGACAATGGACACTCAATGTAATTTTATTAACCTTCATCCAATACACC
CCTGAAATCACCCATTCCCACTGGGAAATATGGCCAAAAAATCGTTCCCG
GTGGAAATTATTCCTCCAATTTTTATCCCCACTGAAAGTAATCAAATAAA
CCAATCCTCACTTCGAAATATAATACTTTTTTTCCCATCTCCCCTGAATT
TTGTGACTTGAAAACAGAAGAACTGAAATCCCCAGCCATAAACATATGGG
AATATCAATCCCCATCGCATTTCAGTCCGTTATCTTTATATATAATATAT
TTCAAATGAAATATGTCACCTTGGGACGATTATTGTGACAAACTTTTCAG
TGCTTAGTATAACCCCTTGGAAATCCAACTAAAAATTGAAATTAAGATAA
ATTTAGGTAAAGTTTATGCCCTGAAAATCGATTCAATTTCAAGGTTATTG
AACCACCATTGAATGCCCTATTTATCGGTCAAGATTTAAACCCTGGCTTA
GATTAGGTTTTTTGTATCATTTATCGCCAGTGTAAAATATTTAGAACATA
AGACTTTAGAGGCTATGGTGATACTCACTTTACTCAATACTTGAGTCTCC
AAATTCTTTGAAAACGGTATAAACTGTCTATCTGCATTGGCAAAAATTAA
GCTTTCAAGCTTCTTTGTGGAACCATTAAAACTCAAATTCGAACCCAGTC
TCTTTGTTTGTTTATTTTATGGTTCTGATAGACCTTTTCATAAATTATGT
CACGAACAACACTTGCCTCGTATTCAAACAATTGGCATGGTGATTATGTC
TCTTGAAACATTAAATAATTTTCTTATGAATAGGAAGTAGTTTTTTAATA
AAATCCGCTGGGAGTTAATCACCATGGCAATAATTTCAAAACGAGGCAAG
TTATATGTTCTTAACGTAATTTATGAAAATGTCTATAGCACTTACAAACA
CGAAAGGTTGTATCGTGTCAATTAATAATCTCAAAAAGTGGACCAAGTGC
CTCTGGCTACCACATTGAAGCATTTATCCCCTTGAAAAAATAACTACTTC
TCCCTTGTTGAATAATTATTTAAAGTTTTCAAGTATCTCTAAACTCGAAC
CTAGTCCGAAAAAAAATTGCGGCACCTATGTTACTTGACTCCCCTACCCA
TTAGCTTTCCAAAAAAAAACATCCCCCCCCCCTACTAAAAAGGTTGTATC
GCGTCAAGCAATAAACTCAAAAAGTGGACCGCCTGGCTCTGGGTATGAGA
GTGTTTGAAAATTTATTTCAAATTTATTCCACTTTCAGTGGCCAATACTC
CTTCAACATTTCCTGAAGATTGGTTCATAACATTCAACGTCAAAATCGAC
ATGTCAACAGGTGACGGTCAAATCTTACGGATGACGAAAAACAATGACGT
TATTTTAGACGTCAAAAAGATGTCGTCTATTTTAAAGATTACTCATGAAA
GAAATGGCGAAAAATTTGAACTAATGACAAACTCTCTTGATGTGAGCCAA
GAAATTCATCAAGTTATGATAGGTAAGTTTTGAACAATCACTTTATCGGC
ACTAATCATAATTTGATCCGGACGCTAACACACTTTCGGAACAACCAAGC
CCTGATCTGAAAGGGATTTGTTCCTAACTAATTGTTTAACGCCTAAAACT
CGAATCCGAAATATCATATTAGCTAACTCGGCGAATAATGACAGAGTGGG
GTTTAAAGACTACCTTANCGAACAATAACTTGATCGGCACTAATCGTAAT
TTGATCCGGACGCTAACACACTTTCGGAACAACCAAGCCCTGATCTGAAA
GGGTTTTGTTCTTTTCTAATTGTTTATTAACGCCTAAAACTCGAATCCAA
AATATCATATTACCTAACTCGGCGAATAATGACAAAGTGGGGTTTGTAGA
CTACCTTATTAAACCGGGATTTCGTTACTTTTTGGGATAGTGGCTATCAT
TCTTGACTCCTGCCTAGAAAGCCCGCGTCCGGTGCCCACCGTACCTTTTG
GTCAACACATGCCATGTGTGGGGGAATTGGGTACCATTGCAAACTCTGAT
ACAAGAGAAAAAATAAATGGGTCAGGCATTGCGTGCCTTGGCACTCAAGA
GGTTTGGCCTCGCGTGAGCATCGCTCTTCTAGAGTTTTTTGAGTGTAATG
GTATACGCCATGGCTTGGCAGCTTGCGGTCAAGTGTATGTCAGAATTCGA
AACGTCAAAAAAGAAAACTTTACAAAGTAAAACAAATTGAAACGGTCTCG
CTCTACTTTTTCATCGGAACGGAACTGCTCCGTTTTCTTGCTCCGAAACG
TTCCGAAACCGATATGAACACACTCGATCCGGAACAGTAATGAACATGGT
CTAAATTTGATTATTTCACTAGTGCAAAAGCTTCAAAAAATTAAGAGTGA
CGTCAAAATATCAAATGTTTGGAGCCCGAAAATATAGGGTCCACACATTT
GAAAAAGTTGCAAAGTTACCAAATACGTAGAAAAAAAGTCGTCACGTTTA
GTTTAGTCTAGGGAAATTTGGTTGGTAAAACTAGATGTCAAAAAAAATTT
AAGAACATTTTACCACTTACCAGAATGAAATAATTTATTTATTAATTCCA
TTATTTTCATATATGATGAACAGGCTTCCAGACAGCAAACACACTTGACA
AACAGCTTTTCGTGGTGACTGTTAACGGCTATGTTAGTTACCAAGGTCGC
CATAGAAATGAAACAGTCGCAGTACGTCGTGTTGCTATGGATATATCGAA
CCCTCGAATCTTCTTTGCTGAAAAGATTATTAGCAACATAGAGTTTAATA
CAGATGGTAAGGACTCTCAGCTTGTACAAAACGTTCTTTTAACGTTCATC
TAACGTTATATGGACGTTGGGAACATTAAATAAACGTTGAAACAACGTTG
TTTACCAGCTGGGTGAATTCGTCCCTGTGAAAGGAAAACCCTAAAATGAC
ATAAGGGTTCAAACTCAAATCAAGATATTGTTTCCCCAGCTAGTTTTCTG
AGTTTTTGAATCAAAATAAGGCTTTCCGAGTTTCCCTGTGTTTCCCGAGT
TTCCCTATGTTCTGGTGCAAAACGGAGTTTAATTCCCATGAAAGACGATG
AAGTTGTGAAAAACTTCAGTGCTATTTTTTGTATATCATATTTTTATCAC
TGGAATACGAGAGGCACTTGTTTGGTTGCCAAGAACCAAAAATTTTATAT
CAGACCCTAAAATGGGCTTTTCCAGAACTTTTCCACACCTCCCCTGTTGA
GGATATTCGTTTTTCGTCTGCAGTGGTCAAAGGAATTCAAATCAAGATTT
ACAAAACTTAGAAAATCAATATGAAATTCCGAACATTTTTATTTTCAGCA
CACCGTTTGGTCAAATCAAAATTATGGGATCTTGTTCCTGATTGGCCAAA
AGAATTTTTTCTTGATATCACATACTTAATGATCGAGCCATATACAGGTT
AGTATATGAAGGTAGCTAAAAAGTAAGTTTTAAAATTCAAATGAAGAAAG
GGTCTGGAAATTGAGAAAATGCTGGTCTCAATCCTTAATAGATAAATAAA
GAAATTAACTACAAGGAGAATATTTTCTTACATTGGATTAACAAATTCAA
AATTAATTTAATTGAAAAACTTGCAGAGGATCTGAGTTTCTCTTCTCAGT
GACCAAACATAAGTTTTACAAACTTTCTCTGTTTTGAATAATGAAAGTTT
TTACAATGTAGCTTCCATAAGTAGAACCTTTGCAAGTTGAATTAAACGAC
AAGGTAACCGCCCGACCGTACGTACGGCCCTTAAGTGTCATTTTTCCAAG
CTTCCCAAAGTCCACTATATGGGTCGAAATGAGCAGAGACGAGAAAAAGT
GCACTCTAATGACAAAATTTGGCCTTAGAATGGTCAAAAACCTTCAAGAA
AATGTGCACCGTTAGGGCCCGATTTAAAGGCCTAATTTTGGGCCGCATCA
CGTCCGTTTGTTTTTGAATCGAGTGCCCCCGGGTAATAAACCCCATGGGT
CCCGGTGAGCCATTTGGAGTGAGGCGGCAAATATTTTGGAGGGAGAGGAT
TGTCGCCTATCATGCGACAAGAAAAAGTTCACTTTTCACACTTTCTTAAC
ACCCTAAAAACGCGATCTAACCGGGTGAAAATTTAGTCTTGTAGGTTGTT
TAATACACTCTTCTCGAGATGCATAAATTTATTGTTGTCCTCGTTTTCAA
ACAGATTTCATTGCTATAAAATTACATATTCACGATGATAATTGTGTTGT
TTACACCTCATGAGACATTTAGAATTTCAAGTACTTTTGTTTTACAGTTA
ATGTTTGTCTTTTGGGAATTTAAATTGGTTTAAATGTATAATTTTATAGC
AATGAAATCTGTTTGAAAACGAGGACAACAATAAATTTATGCATCTCGAG
AAGAGTGTATTTAGAAATTAGTCTGCCGAAAAGTGAGAGCGCTACACTGG
GCGAAATAAGTGATTTCCAATACTGGAAATGTCTTGAAAATGTGTAACTT
AGGAAATACAGAAAAGTCATATTTTCATATTTACAAATGTATATGGAAGT
ATCATATTTTCAAGATATTTCCAGGATTGGAAATCTCTTATTTCGCCCAG
TGCCATGCCCCCGTCAACAGGGCCTATATGAGCCCCCGAAACCAAGCTTT
CCATAAATCGATTATATTATATATTTTTTTTATTTCAGGACATTATTGCA
ATTTGTTCCATATAACAACTGGTCGAAATCATGAGGTCTTTGGAAGTCGA
ATTGCGGTGGTCTTTCTTCGTGGCAGTAACTCATACACTGTAGAAATGGA
AAAAGGGACTGAAAAAGCAACACGGTGGAAGAGTGGGTACCAGTCTACTC
AAACATGGGGTCGAATAATGAGGATGAGGTTTGTACATAGATATCTTATA
TGAAACACTAGATAGAGCTACTCTGTATTTCCCAAGCAACGGTAGGTGAA
GCAAATAATGCACCATCTTTGCTGAAAGTAGGTCACAGTAGGTCACAGTT
CGGTACCGGTAATTTATTCAACCAAGCAAAAAAAACTGAATGGCGCGAAG
CGACGAGGCGAAAGATACGGCCGGCACCGAACTATGGTCTACTTATCAAA
GATGGCAGATTATTTTGCTTCAGCTAGTGACAGAGTAGCTCTATTTAGTG
TTTTATATAAGATATCGGTGGGCTTTTAAAAGCAATAAAAGATGATTAAT
TGATCAATCCTGAATTGGTTAAAATTTCACGATATATTTAATTTTGCGGA
TCAGGGTATTCAAAAATTTTACGTGAATTTAATTTTGCGAATGTTTTTGA
AGTCAACTGAAATGGACCTGAAAATTTCAAAATTCAACAAGTATCGAACG
TTAGTTAAGGCCATTTTCAGACGTCACAGTTTCGTTCCGAAACGAAACGG
CTTCGAAACAAGTGTGAACGTCAAAACTCGAAACATCAAAAGAGAAAACG
TTACAAAGAAAATAAGATCGAAGCGGTTTTGCTCCACTTTTTTCATCGGA
ATAACGAAACTGCTCCGTTTTCTTGCTCCGAAACGTTCCGAAACCAATGT
GAACATACTCGATCCGTAACAAAAATCTAACCAGAGTGTAATGGAACAGT
AACGANATGAACATACTCGATCAGTAACAAAAATCTAACCAGAGTGTAAT
GGAACAGTAACGAGTGAACATGGTCTAAGAGTGTTTTTTTTTTCTCGCTA
AAAACACAATTACTATAAATACAACAATTTTTTCTCCAATACTTCCAACA
GGGTGGAGCAGGTTTTGGAAAACGGAGAGTACATATTGAGATTTCGTTTG
AATGGAAATGAAAATGTTTTACAAGCATCAAATGGTATGGATGCTACAAA
TCACACTAATGTCAGAGTGTATGCATCAGATGGTTGGCACACACAAGTTT
CGGCCACCACTGTTTTGCTCAAATTGGATTATACTAAAAAGTCTCCATAA
AATCATAACAGTTATTGTGGGCCCCCAGTGTAAAAATTGCGTGAATGCAT
GAATTGGGAANCCATAAAATCTATAACATAACAGTTATTGTTGGCCCCCT
GTGTAAAAATTGCGTGAATGCATGAATTGGGAATGTTTGCGTGAACAAAA
ATTGCGTGAATTGTGAAAAAACATTGCGTGAATGTGTGAGTTTGAAAAAA
AAATGTGTGATTGCGTGAATTGAAGGTCCGATGGGGGCCTCTATTATGGT
AATAAATAAAGCTTTTTAAACTAATGTGGTGAGCGTTTACTTACAAATAG
CTGGCACACCACTGTTCTATTTGAATTAGATAATACTTTGAATTACACTG
TCGGGCTAGAGTAGAGCGATATCATGTTGATATCACGTGAGTATAAGAAG
AAAATCTGTCAGCGGGAGGGACTTTATAACAACTTACCCTCGCTCTCTAA
CGCAGCTCTTTTTCTAGGTGACCTACAGCGGCCGTTAAGAGTACATTACT
TTTCCAGAGTACACTGTGAGGGTGTAAAAAAGTGAAAAAAAATGCGAGGT
TTTTTATTGCAAATTTTCGGAAAAATTGTCCACTTTTGCCTT

Coding sequence (CDS) from alignment at sc0000093:327991..339432-

>TCONS_00009400 ID=TCONS_00009400|Name=TCONS_00009400|organism=Clytia hemisphaerica|type=CDS|length=1287bp|location=Sequence derived from alignment at sc0000093:327991..339432- (Clytia hemisphaerica)
ATGTTTCACTGCACCAAGAAACTTGTTTTCAGATATCTCGTACTAGGGCT
GTTATTTTTTGAACAAGTTATCCTAGATTCGACTTTTACCAAAGCAGTGC
GTAATAAGAAACTGCAGCATAGAGATAGAGTCGTGTTAAAGGAGCCTACA
ATAGTACGTTGTTTGGCCTCTTGTGAGTATGTGAATGGTTGTAAATCGGT
TAATTACCATTACGGAGATAAGATTTGTGAGGTTATGCGCCACACAGCAC
AAAATGAAGGAGATAATACACTAGAAGAGGCACATGGCTGGTACTACTAT
GAGAAAAATGAGAAAATGTTTGACATGTCAAAGATGTTTTTGAAGACAAA
TGACAGTCGCTTTGTGACAATGGACACTCAATTGGCCAATACTCCTTCAA
CATTTCCTGAAGATTGGTTCATAACATTCAACGTCAAAATCGACATGTCA
ACAGGTGACGGTCAAATCTTACGGATGACGAAAAACAATGACGTTATTTT
AGACGTCAAAAAGATGTCGTCTATTTTAAAGATTACTCATGAAAGAAATG
GCGAAAAATTTGAACTAATGACAAACTCTCTTGATGTGAGCCAAGAAATT
CATCAAGTTATGATAGGCTTCCAGACAGCAAACACACTTGACAAACAGCT
TTTCGTGGTGACTGTTAACGGCTATGTTAGTTACCAAGGTCGCCATAGAA
ATGAAACAGTCGCAGTACGTCGTGTTGCTATGGATATATCGAACCCTCGA
ATCTTCTTTGCTGAAAAGATTATTAGCAACATAGAGTTTAATACAGATGC
ACACCGTTTGGTCAAATCAAAATTATGGGATCTTGTTCCTGATTGGCCAA
AAGAATTTTTTCTTGATATCACATACTTAATGATCGAGCCATATACAGGA
CATTATTGCAATTTGTTCCATATAACAACTGGTCGAAATCATGAGGTCTT
TGGAAGTCGAATTGCGGTGGTCTTTCTTCGTGGCAGTAACTCATACACTG
TAGAAATGGAAAAAGGGACTGAAAAAGCAACACGGTGGAAGAGTGGGTAC
CAGTCTACTCAAACATGGGGTCGAATAATGAGGATGAGGGTGGAGCAGGT
TTTGGAAAACGGAGAGTACATATTGAGATTTCGTTTGAATGGAAATGAAA
ATGTTTTACAAGCATCAAATGGTATGGATGCTACAAATCACACTAATGTC
AGAGTGTATGCATCAGATGGTTGGCACACACAAGTTTCGGCCACCACTGT
TTTGCTCAAATTGGATTATACTAAAAAGTCTCCATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005264XLOC_005264Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009400-proteinTCONS_00009400-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009400-exon-sc0000093-1575043694:339077..339432TCONS_00009400-exon-sc0000093-1575043694:339077..339432Clytia hemisphaericaexon
TCONS_00009400-exon-sc0000093-1575043694:334752..337448TCONS_00009400-exon-sc0000093-1575043694:334752..337448Clytia hemisphaericaexon
TCONS_00009400-exon-sc0000093-1575043694:334513..334576TCONS_00009400-exon-sc0000093-1575043694:334513..334576Clytia hemisphaericaexon
TCONS_00009400-exon-sc0000093-1575043694:333011..333244TCONS_00009400-exon-sc0000093-1575043694:333011..333244Clytia hemisphaericaexon
TCONS_00009400-exon-sc0000093-1575043694:331727..331909TCONS_00009400-exon-sc0000093-1575043694:331727..331909Clytia hemisphaericaexon
TCONS_00009400-exon-sc0000093-1575043694:331086..331184TCONS_00009400-exon-sc0000093-1575043694:331086..331184Clytia hemisphaericaexon
TCONS_00009400-exon-sc0000093-1575043694:329655..329844TCONS_00009400-exon-sc0000093-1575043694:329655..329844Clytia hemisphaericaexon
TCONS_00009400-exon-sc0000093-1575043694:327991..328781TCONS_00009400-exon-sc0000093-1575043694:327991..328781Clytia hemisphaericaexon
TCONS_00009400-exon-sc0000093-1510915933:339077..339432TCONS_00009400-exon-sc0000093-1510915933:339077..339432Clytia hemisphaericaexon
TCONS_00009400-exon-sc0000093-1510915933:334752..337448TCONS_00009400-exon-sc0000093-1510915933:334752..337448Clytia hemisphaericaexon
TCONS_00009400-exon-sc0000093-1510915933:334513..334576TCONS_00009400-exon-sc0000093-1510915933:334513..334576Clytia hemisphaericaexon
TCONS_00009400-exon-sc0000093-1510915933:333011..333244TCONS_00009400-exon-sc0000093-1510915933:333011..333244Clytia hemisphaericaexon
TCONS_00009400-exon-sc0000093-1510915933:331727..331909TCONS_00009400-exon-sc0000093-1510915933:331727..331909Clytia hemisphaericaexon
TCONS_00009400-exon-sc0000093-1510915933:331086..331184TCONS_00009400-exon-sc0000093-1510915933:331086..331184Clytia hemisphaericaexon
TCONS_00009400-exon-sc0000093-1510915933:329655..329844TCONS_00009400-exon-sc0000093-1510915933:329655..329844Clytia hemisphaericaexon
TCONS_00009400-exon-sc0000093-1510915933:327991..328781TCONS_00009400-exon-sc0000093-1510915933:327991..328781Clytia hemisphaericaexon
TCONS_00009400-exon-sc0000093-1491911889:339077..339432TCONS_00009400-exon-sc0000093-1491911889:339077..339432Clytia hemisphaericaexon
TCONS_00009400-exon-sc0000093-1491911889:334752..337448TCONS_00009400-exon-sc0000093-1491911889:334752..337448Clytia hemisphaericaexon
TCONS_00009400-exon-sc0000093-1491911889:334513..334576TCONS_00009400-exon-sc0000093-1491911889:334513..334576Clytia hemisphaericaexon
TCONS_00009400-exon-sc0000093-1491911889:333011..333244TCONS_00009400-exon-sc0000093-1491911889:333011..333244Clytia hemisphaericaexon
TCONS_00009400-exon-sc0000093-1491911889:331727..331909TCONS_00009400-exon-sc0000093-1491911889:331727..331909Clytia hemisphaericaexon
TCONS_00009400-exon-sc0000093-1491911889:331086..331184TCONS_00009400-exon-sc0000093-1491911889:331086..331184Clytia hemisphaericaexon
TCONS_00009400-exon-sc0000093-1491911889:329655..329844TCONS_00009400-exon-sc0000093-1491911889:329655..329844Clytia hemisphaericaexon
TCONS_00009400-exon-sc0000093-1491911889:327991..328781TCONS_00009400-exon-sc0000093-1491911889:327991..328781Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000093supercontigsc0000093:327991..339432 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.153136	0.120023	0.211229	0.127041	0.121182	0.0690454	1.37744	1.4734	3.0564	2.73038	2.21519	2.62544	2.00053	2.16712	2.77494	2.08245	1.00429	1.15398	4.41633	3.42266	2.52643	2.39353	0.786772	1.63482	2.00274	4.50789	5.47814	7.849	5.35038	3.86833
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003609Pan_app
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009400 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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