TCONS_00009628 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00009628
Unique Name	TCONS_00009628
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2497

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000097:217027..223266-
coding sequence from alignment at sc0000097:217027..223266-

transcript sequence

>TCONS_00009628 ID=TCONS_00009628|Name=TCONS_00009628|organism=Clytia hemisphaerica|type=transcript|length=2497bp
CTGCACAGTCAACGCCACACTCCAGAGACAGAAGGTCGTAGGGTTTTCTT
AATCCTTTTCTTATCTTTGTTAGATAATCTTCCTAGTGAAACAGACATCC
AGTAAATCAATGCCAATAAGGTTGTAAGTCTTTGAATGTTTAAATTTGAT
TTCGACATGTCGAACATGTACGATGTATACGACGTAGTTTTATTTTGAGG
AGgcaagaaaaaaagtcaaactGAAACTGATAAAAAAGTACAAAGTACAA
GCTATACTTCTCTTTTGCTTCTAATGATGAATGATGATGACAGGGATGTG
ATGAGTGAGGGTTTTATTCagggaaaaaagataaaatacatATGTTTGCT
GTAAAGTGAAAGCTCTTTCACAATTTTGAAGATGACCTTTGGACtttata
tttacatttttggGATGTTTTTGCAAATGAGTGAGTAGCGTTTCTATTGG
CAAATAATGATGTAATCAGTGCAAAGTACATGCTACTACACACTATTtat
cttgagaaattcaaggcAGCAACCATTTTGCCATTGAATAGTAGAGCAAC
CTGGAAGAGTATATTTATTATTTCTCATCAAGATTTTTGATTGTGAGATC
ATTCAATTTTCAAGTCTTTTTACTGTCAAGATTTAActaaaaatcaagtg
aaaatgTCTGGAGATAACAGAAGTGACATGGAAGTCGACACACTGCCAGA
TACACCACCAAATGAAGTGAAAAGCTTCCATGAAAGATTGTCAGAAATTC
CAATGTACTCAATGACATTGTCTCAGCTCACAAGTGCTTACACATCATTG
AAGGATCGTAATCAAGTTTTGAACCAAGCTTTTACCACTGGGGAAAAGTA
TTTTACCCAAGCTAGTGAAGTTGCAAAGCCAGTTGTTCTTTCTGCTACAG
AAACTGCACTAAAAGCTGCAAAACCAATTGTTGGTGACATAACAGACCCA
GCTGGAAAAATTGATCAGTGTGCATCGGAAGCATTAGCAAAAGTGCAAGA
GAAACTTCCAATTGTTAATCAAACTCCCACACAGATTGCTGAAAGTGCGA
AGGCTTCTGCATCAGAAACTGCCAATTATTACAAAACATCAGCTCAAGAA
ACAGCAAACTATTACAAAACATCTGCACAAGAGACTGCAAATTATTACAT
CGAAAAGCTCAGTGCTTCACGCATCGGTCAGCAAACCACAACCCAACTTG
ATAATGCTGTTTCATTTTCGGAATTGATGGTAGAGATATGTTTTCCAACT
GATGGGAGTTGTCCAGATGATTTGAAAGAACTAGAACAGGCTGAAGAAGA
CGAAGATAAAGGACTTTTAGTTCGAGCTGGAAACCTCAAAGAACGAGCTG
TCAGACGTGGAACACGTAAAGTTATGTCTTATACACCAGTCCAAACTACC
ATTGACAATgttcAATATGCACAGAAGCAAATTTCTGAAATGACCCAAAA
GGTTTTACAAGGAACCAATTATGTTGCAACCAAAAGCCTTGAAGCGAAAG
ATCTATTGAAGGAGAACTACCCAACAATCAAAACTTTAGCTCAAGAAACT
TTAGTAGAAGGTACTGAACTCATCGGCAAGAAGTGGGATCACGTCTATAA
GACTAGTATGTACATTCCAAAGAAAGCTATCCAAGTGACTGGAGAAGTCT
ACATTAATGCCCAGGAAATCGTGTTCGCTTACAGCAAGGCTCACTCACTG
ACTGAACTTCCGCATGCAGTTGTTGAAATGGCTGAAAAGTACTACAACAA
TCTTGCAACAGAAGGAATGACAATAGACCAAGTCAAAGAAAAGGCTGTTG
CATTTGTTTACGTCCCTGCTCAAGTTGTCTCTGAGTACCTTCGAACCTCG
CGTCTCGTCCAATGGGTCGTACCGAAATCAATTCAAACCGAAAGAATTGA
AATGGTCGAAGTTACACACTCCTCAAGTCCCGTTCAACCAGAAGCTTCGA
CTAATGGCNAAGTTATCTCTGAGTATCTTCGAACCTCGCGTATCGTCCAA
TGGGTCGTACCGAAATCAATTCAAACCGAAAGAATTGAAATGGTCGAAGT
CTCACGCTCCTCAAGTCCCGTTCAACCAGAAGGTTCGACTAATGGTACCT
CTGATACAAGTCCAGTACATACAGCTCAAACAAATGAGAAAGAACTGATT
GAATAAATAAAGatgttctttaatttttcaattcattctCCCCCCGTATA
GGTTGATTAGAACTCTTTATTAAATTTCTTGGTATGATTAACAGTTTGAA
GTAAACATATAAATATTGGTGAAAATTAAAGATTATAAATTCTGTAATTC
TGAATGTTAGAAAATTTGTTTATTCTTATATtattaaaaaaaccttttat
gaaatattgaatattggacaaaaaaattttttaacagtCATTTTGCAGAA
GCTTAAGTGTTGTAGAGAATACTTAATCGTTCTTTTTGATGTTAATGTCA
TCTCGGCTCATTggataaaaatttcttcaagtagaatttttggaaat

Run BLAST on NCBI

protein sequence of Perilipin related protein

>TCONS_00009628-protein ID=TCONS_00009628-protein|Name=Perilipin related protein|organism=Clytia hemisphaerica|type=polypeptide|length=500bp
MSGDNRSDMEVDTLPDTPPNEVKSFHERLSEIPMYSMTLSQLTSAYTSLK
DRNQVLNQAFTTGEKYFTQASEVAKPVVLSATETALKAAKPIVGDITDPA
GKIDQCASEALAKVQEKLPIVNQTPTQIAESAKASASETANYYKTSAQET
ANYYKTSAQETANYYIEKLSASRIGQQTTTQLDNAVSFSELMVEICFPTD
GSCPDDLKELEQAEEDEDKGLLVRAGNLKERAVRRGTRKVMSYTPVQTTI
DNVQYAQKQISEMTQKVLQGTNYVATKSLEAKDLLKENYPTIKTLAQETL
VEGTELIGKKWDHVYKTSMYIPKKAIQVTGEVYINAQEIVFAYSKAHSLT
ELPHAVVEMAEKYYNNLATEGMTIDQVKEKAVAFVYVPAQVVSEYLRTSR
LVQWVVPKSIQTERIEMVEVTHSSSPVQPEASTNGXVISEYLRTSRIVQW
VVPKSIQTERIEMVEVSRSSSPVQPEGSTNGTSDTSPVHTAQTNEKELIE

Run BLAST on NCBI

transcript from alignment at sc0000097:217027..223266-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00009628 ID=TCONS_00009628|Name=TCONS_00009628|organism=Clytia hemisphaerica|type=transcript|length=6240bp|location=Sequence derived from alignment at sc0000097:217027..223266- (Clytia hemisphaerica)
CTGCACAGTCAACGCCACACTCCAGAGACAGAAGGTCGTAGGGTTTTCTT
AATCCTTTTCTTATCTTTGTTAGATAATCTTCCTAGTGAAACAGACATCC
AGTAAATCAATGCCAATAAGGTTGTAAGTCTTTGAATGTTTAAATTTGAT
TTCGACATGTCGAACATGTACGATGTATACGACGTAGTTTTATTTTGAGG
AGGCAAGAAAAAAAGTCAAACTGAAACTGATAAAAAAGTACAAAGTACAA
GCTATACTTCTCTTTTGCTTCTAATGATGAATGATGATGACAGGGATGTG
ATGAGTGAGGGTTTTATTCAGGGAAAAAAGATAAAATACATATGTTTGCT
GTAAAGTGAAAGCTCTTTCACAATTTTGAAGATGACCTTTGGACTTTATA
TTTACATTTTTGGGATGTTTTTGCAAATGAGTGAGTAGCGTTTCTATTGG
CAAATAATGATGTAATCAGTGCAAAGTACATGCTACTACACACTATTTAT
CTTGAGAAATTCAAGGCAGCAACCATTTTGCCATTGAATAGTAGAGCAAC
CTGGAAGAGTATATTTATTATTTCTCATCAAGATTTTTGATTGTGAGATC
ATTCAATTTTCAAGTCTTTTTACTGTCAAGATTTAACTAAAAATCAAGTG
AAAATGTCTGGAGATAACAGAAGTGACATGGAAGTTGACACACTGCCAGA
TACACNCAAGTCTTTTTACTGTCAAGATTTAACTAAAAATCAAGTGAAAA
TGTCTGGAGATAACAGAAGTGACATGGAAGTCGACACACTGCCAGATACA
CCACCAAATGAAGTGAAAAGCTTCCATGAAAGATTGTCAGAAATTCCAAT
GTACTCAATGACATTGTCTCAGCTCACAAGTGCTTACACATCATTGAAGG
ATCGTAATCAAGTTTTGAACCAAGCTTTTACCACTGGGGAAAAGTATTTT
ACCCAAGCTAGTGAAGTTGCAAAGCCAGTTGTTCTTTCTGCTACAGAAAC
TGCACTAAAAGCTGCAAAACCAATTGTTGGTGACATAACAGACCCAGGTA
AAATTATTTCACAGTGATCATTGCTAAATCTTTTTTAATCCATATATACG
TAAACCAGTCCCTCTCTAACTTGATTTTTCTGGAATACTTTTCCAGTCCA
AACTATTTCAGAAAAGGAGAGCGAAAACATTCAATAAGGCTGGGCTTAAA
AAATTGTTGGTTTGCCGTCATCTGACCCTAGATTAAGGAGGTGGGTCGGT
CGGTCGAAATTTTGTTTTATTTTGGTGATTTTTGAAATTTTCGTCCATGG
AAAGGTTAACAGTTTGTTTACATTTAGGTAGTTTTGAATAAAAAACAGAA
GTGCTAGCAGGGAATTTACGATTCTTATGCTTGAGACAAACAAGATACAA
GTTTTGATTTTTTATTGTTTGAAGTTTTTGAAGGAAAAATAATCTTCTTT
AAAATGGTAATAAAATTTTTTGGGTCGGCAGGTCGGCAGGTTTCGAGGTA
GGGTCGGTCGGGTGATGGCAAACCTAGTCCAGCCTAGTAAAGTTTTTATC
CAGGCTACAGGAAGCCATCCAAACTCTACTGGTACTGCTCTAATTTGGGA
TGATTGGTCGAAACATGGGACTGGTTAATATCTGGTCTGTATTTTCACTT
ACTGTTAAATCTCTTTGACAACAAATTTGTTTTGATACTCCACCAAGTTA
TCCAATCATACTTCTTCGTTCCTCTTGGAGTGCACAGACACTCCTGGACA
CTCGCGCGTGTTCCACTACGGATTTTTATTTCTGGTGAAAATTTCTTAGC
CACAAATAAATGACAACCAACACCACTCCCATTCGACTTTAAATGTCAAA
TTAACATTTTTTCGTTGCAAAGTTTGAGTTTGGATGGTTCCCCTTAAAAT
CCAGTTTAGCAAATATCACAATTCCACAGTGCTGCAATTTTCCAAAATGT
TGTGGTTTTTCACAACACTTAAACGGAGAGCAGATTGCGATTTTACACAA
CACTTCTTTTTTGTGTGATATCTGCAATTAGGAATGCATAATAATTTTTT
AGAAAATAAGTAAATAAATATCGTAATGGAGCAAAGTAGTGCTATTTTCA
AGATCAATTATGAAAAATCCCCAGGGAAAAAATTAGCTGTTAGAGTGATC
TGCCAAATGCACATAGCTTGAAACCCTGTTTGTCAGGAAAGATTCTTTCC
ATTAGAACAGTGTAATTTCTTAGATGATTTAACTATTTTTATGAAGGTGG
CTGCAATGTGTAATGTCATTTTTCATTTTTGTTTTTATACATTTCAGCTG
GAAAAATTGATCAGTGTGCATCGGAAGCATTAGCAAAAGTGCAAGAGAAA
CTTCCAATTGTTAATCAAACTCCCACACAGGTTTGTATTTTCATCTGAGT
TTAGAACATAAAAATCAACCTGCAATAGAATTCTTGTAGGACTAGATGCC
ATTTTAACTCAATGACTCCAACATGAGATACTCTTAGTGTCCAACAAAAA
TAAAAATTAACGCACTAAGAAAGTCATACGTTATCAGTGTAGGACACTAA
GATTATATATATGTAATGTTTTTGGGGTCATTAAATAGTGTTTTAGAGCT
GATCTTTTTAGTCAAAACTGTATCGTTTCCTTCAAAAGGTCTATGACAAA
TTAAGAAATAAAGAACAGTTCTCGATTTGATTATTTTGCCTGATTCAATT
ATGTATTAGTTATCGCATAGTGCAGAGTGCAATATGGGATTTATTTTTTG
AGTTCTTTTATTTTTTGCTTCTTATTTTCAAGGCGAGTGATAATAACAGC
AAAAATAAAAGAACGAGAAAAATAAACCCCTATTGCAAGAGGTATTACTC
TCGGGTACCTAATAGCCAGGGGGTTGGAATAAGCAGGGGGGTTGGAAAAA
ATCTCAAAATTTAATAAGCGAGGGGGGTTGGAATAAAAATGTCCTGGGTG
GAAAATGTTTGAAAAGGAGGCTAATACAGTAGAATTAAGACAAAAAAGGG
AACTTTCAAAAACATTTTTCCAAAAATTAATTAGCGGGGGGACGGCTATT
AGGTACCCGAGAGTATGTGATAATTGGTTTATTGCAAGACTTGAAAAATC
TCCTTTTTTTATTTCTCAAAGAAATTGACGTTAAAAAAATTAAGCTATTG
CATTGATCAGTGCAATAAATGAAGCGCAACAGTGCAAATAAAACGAACAG
TGCAATAAATGAAAATATGACGTTTATGCACTGTAATGTAACCAATCAGA
TTGAACATATTTTACACGTCATGCGATAAACTGTAATATTTATTGAATTA
GAAACCACTTAGTTTTAATATGTTCAATGCTTTTTCACTTGACAATTAGT
AAGTAAGTCTGCAACCGATAGCTATCTACCCAAAAGTAGGGAAGGTGGCC
ACTCCTTCTCTCTGAATTGCTGATCATTAAGCAGAGAGCAATACCATTTT
GGAAATATTTGGTATGACCTGGCTGGGGGTTGAACCCACAACCTTGCGCA
TTGTGCTGGATGCTCTACCACTACGCAACGGTCACTTGTCAACTAAATTG
GGCTGGAGTCTATTTAAGACAAAGATTTAAGGAATGATGACTCCAGTCAA
TAAGGCCTTGCATAATCATTTGGCCTACAGGAAGCTTCAGTTGCTGGTCC
TGAGCAACATTTCCAAATTATGGATGTGTCCAAGAAGTCAACTCTTCTCA
ACTCAACTATTGATAGATTGATCCTAGTCCCTTCCCTTGATTTATATTTT
CATTATGCCAATAAGTGCAGGGGATCAGTACTAAACTCTCTGACATATAA
GTCATATAACAGTACTTTTTAAAGAGATTTTCTCGAATTTTTAGAGAAAT
GGTACTATTTTCCAAAGTCTTAAAGTTTGAAATCTCTAAAAATGGGTTCT
GACTTGGTTCTTGAAAATAAAAAATTGTATTTGGAAGATATTTTGTGAAA
ATTTATTTATCATTCTAAATACTGAAAAATGGTTTTCTTGTATTTTAGAT
TGCTGAAAGTGCGAAGGCTTCTGCATCAGAAACTGCCAATTATTACAAAA
CATCAGCTCAAGAAACAGCAAACTATTACAAAACATCTGCACAAGAGACT
GCAAATTATTACATCGAAAAGCTCAGTGCTTCACGCATCGGTCAGCAAAC
CACAACCCAACTTGATAATGCTGTTTCATTTTCGGAATTGATGGTAGAGA
TATGTTTTCCAACTGATGGGAGTTGTCCAGATGATTTGAAAGAACTAGAA
CAGGCTGAAGAAGACGAAGATAAAGGACTTTTAGTTCGAGCTGGAAACCT
CAAAGAACGAGCTGTCAGACGTGGAACACGTAAAGTTATGTCTTATACAC
CAGTCCAAACTACCATTGACAATGTAAGTTTATTCTGCAAACCGTAAGAC
TGGAATTATAATTTGTATACACACTTTTTTTATAAGAATAGTGTACTTTG
GATGAGGGTCAAGTATTCTTAAGGAAGTGCCAAAATTTAGGGTGAAATAT
TTATAACGTAATTCTTACTTTTTTAGACTTGACCTTTTTACAATCATGAG
AAATGATCAATTTGAGAGTTTTGGGCTTTTGAGTGAAGATTTGGGTTAAA
ATTTGATTTCTTCCTCAAAGCTTAAATTTATCTCTAACAAAGGAAGCAGT
TTTTTCTGTTAACCAAATACAAAATGACCGTATTCTTATCAAATTCTGTG
AAATTCACCCTAGAGGGTATTCTTAGGGTATTCTTACGATTTGGCCAATT
TTCACCCTGATATCTTATAGAAGATATTCTTATAAAAAAAGCGTTTACTG
TTTGAAATGGCCGATATAATTGACTTTGAAAAAGTCCTCATATATATATA
GGAAAAAAATTTTGATCAAACTTTCTACTTACCAAACTTTTATTTTTATT
TTTCAGGTTCAATATGCACAGAAGCAAATTTCTGAAATGACCCAAAAGGT
TTTACAAGGAACCAATTATGTTGCAACCAAAAGCCTTGAAGCGAAAGATC
TATTGAAGGAGAACTACCCAACAATCAAAACTTTAGCTCAAGAAACTTTA
GTAGAAGGTACTGAACTCATCGGCAAGAAGTGGGATCACGTCTATAAGAC
TAGTATGTACATTCCAAAGAAAGCTATCCAAGTGACTGGAGAAGTCTACA
TTAATGCCCAGGAAATCGTGTTCGCTTACAGCAAGGTATGTCTTTTTCAT
TTTTTGGAAACAATAGATTCTTATTTTGATTGAGATACATAAAATAGTTA
CAACCTAGGTTAATTACTTTTCTTGCCATTCAGTGGTACATCGGAATGAG
CAATCGAAGGTGTCTCTTGTTGACTTGCTGAATCCTTAAAAGATTGTTTT
TGCTCTTAGACAGTTGTATGAAAAAAACTAAGGTAATTTTTTTCTCAAAT
TGTGATTATAATGTGCCTTTACTTTTTCTAGGCTCACTCACTGACTGAAC
TTCCGCATGCAGTTGTTGAAATGGCTGAAAAGTACTACAACAATCTTGCA
ACAGAAGGAATGACAATAGACCAAGTCAAAGAAAAGGCTGTTGCATTTGT
TTACGTCCCTGCTCAAGTTGTCTCTGAGTACCTTCGAACCTCGCGTCTCG
TCCAATGGGTCGTACCGAAATCAATTCAAACCGAAAGAATTGAAATGGTC
GAAGTTACACACTCCTCAAGTCCCGTTCAACCAGAAGCTTCGACTAATGG
CNAAGTTATCTCTGAGTATCTTCGAACCTCGCGTATCGTCCAATGGGTCG
TACCGAAATCAATTCAAACCGAAAGAATTGAAATGGTCGAAGTCTCACGC
TCCTCAAGTCCCGTTCAACCAGAAGGTTCGACTAATGGTACCTCTGATAC
AAGTCCAGTACATACAGCTCAAACAAATGAGAAAGAACTGATTGAATAAA
TAAAGATGTTCTTTAATTTTTCAATTCATTCTCCCCCCGTATAGGTTGAT
TAGAACTCTTTATTAAATTTCTTGGTATGATTAACAGTTTGAAGTAAACA
TATAAATATTGGTGAAAATTAAAGATTATAAATTCTGTAATTCTGAATGT
TAGAAAATTTGTTTATTCTTATATTATTAAAAAAACCTTTTATGAAATAT
TGAATATTGGACAAAAAAATTTTTTAACAGTCATTTTGCAGAAGCTTAAG
TGTTGTAGAGAATACTTAATCGTTCTTTTTGATGTTAATGTCATCTCGGC
TCATTGGATAAAAATTTCTTCAAGTAGAATTTTTGGAAAT

Coding sequence (CDS) from alignment at sc0000097:217027..223266-

>TCONS_00009628 ID=TCONS_00009628|Name=TCONS_00009628|organism=Clytia hemisphaerica|type=CDS|length=9018bp|location=Sequence derived from alignment at sc0000097:217027..223266- (Clytia hemisphaerica)
GCTCACTCACTGACTGAACTTCCGCATGCAGTTGTTGAAATGGCTGAAAA
GTACTACAACAATCTTGCAACAGAAGGAATGACAATAGACCAAGTCAAAG
AAAAGGCTGTTGCATTTGTTTACGTCCCTGCTCAAGTTGTCTCTGAGTAC
CTTCGAACCTCGCGTCTCGTCCAATGGGTCGTACCGAAATCAATTCAAAC
CGAAAGAATTGAAATGGTCGAAGTTACACACTCCTCAAGTCCCGTTCAAC
CAGAAGCTTCGACTAATGGCNAAGTTATCTCTGAGTATCTTCGAACCTCG
CGTATCGTCCAATGGGTCGTACCGAAATCAATTCAAACCGAAAGAATTGA
AATGGTCGAAGTCTCACGCTCCTCAAGTCCCGTTCAACCAGAAGGTTCGA
CTAATGGTACCTCTGATACAAGTCCAGTACATACAGCTCAAACAAATGAG
AAAGAACTGATTGAATAAGTTCAATATGCACAGAAGCAAATTTCTGAAAT
GACCCAAAAGGTTTTACAAGGAACCAATTATGTTGCAACCAAAAGCCTTG
AAGCGAAAGATCTATTGAAGGAGAACTACCCAACAATCAAAACTTTAGCT
CAAGAAACTTTAGTAGAAGGTACTGAACTCATCGGCAAGAAGTGGGATCA
CGTCTATAAGACTAGTATGTACATTCCAAAGAAAGCTATCCAAGTGACTG
GAGAAGTCTACATTAATGCCCAGGAAATCGTGTTCGCTTACAGCAAGATT
GCTGAAAGTGCGAAGGCTTCTGCATCAGAAACTGCCAATTATTACAAAAC
ATCAGCTCAAGAAACAGCAAACTATTACAAAACATCTGCACAAGAGACTG
CAAATTATTACATCGAAAAGCTCAGTGCTTCACGCATCGGTCAGCAAACC
ACAACCCAACTTGATAATGCTGTTTCATTTTCGGAATTGATGGTAGAGAT
ATGTTTTCCAACTGATGGGAGTTGTCCAGATGATTTGAAAGAACTAGAAC
AGGCTGAAGAAGACGAAGATAAAGGACTTTTAGTTCGAGCTGGAAACCTC
AAAGAACGAGCTGTCAGACGTGGAACACGTAAAGTTATGTCTTATACACC
AGTCCAAACTACCATTGACAATCTGGAAAAATTGATCAGTGTGCATCGGA
AGCATTAGCAAAAGTGCAAGAGAAACTTCCAATTGTTAATCAAACTCCCA
CACAGATGGAAGTCGACACACTGCCAGATACACCACCAAATGAAGTGAAA
AGCTTCCATGAAAGATTGTCAGAAATTCCAATGTACTCAATGACATTGTC
TCAGCTCACAAGTGCTTACACATCATTGAAGGATCGTAATCAAGTTTTGA
ACCAAGCTTTTACCACTGGGGAAAAGTATTTTACCCAAGCTAGTGAAGTT
GCAAAGCCAGTTGTTCTTTCTGCTACAGAAACTGCACTAAAAGCTGCAAA
ACCAATTGTTGGTGACATAACAGACCCAGATGTCTGGAGATAACAGAAGT
GACGCTCACTCACTGACTGAACTTCCGCATGCAGTTGTTGAAATGGCTGA
AAAGTACTACAACAATCTTGCAACAGAAGGAATGACAATAGACCAAGTCA
AAGAAAAGGCTGTTGCATTTGTTTACGTCCCTGCTCAAGTTGTCTCTGAG
TACCTTCGAACCTCGCGTCTCGTCCAATGGGTCGTACCGAAATCAATTCA
AACCGAAAGAATTGAAATGGTCGAAGTTACACACTCCTCAAGTCCCGTTC
AACCAGAAGCTTCGACTAATGGCNAAGTTATCTCTGAGTATCTTCGAACC
TCGCGTATCGTCCAATGGGTCGTACCGAAATCAATTCAAACCGAAAGAAT
TGAAATGGTCGAAGTCTCACGCTCCTCAAGTCCCGTTCAACCAGAAGGTT
CGACTAATGGTACCTCTGATACAAGTCCAGTACATACAGCTCAAACAAAT
GAGAAAGAACTGATTGAATAAGTTCAATATGCACAGAAGCAAATTTCTGA
AATGACCCAAAAGGTTTTACAAGGAACCAATTATGTTGCAACCAAAAGCC
TTGAAGCGAAAGATCTATTGAAGGAGAACTACCCAACAATCAAAACTTTA
GCTCAAGAAACTTTAGTAGAAGGTACTGAACTCATCGGCAAGAAGTGGGA
TCACGTCTATAAGACTAGTATGTACATTCCAAAGAAAGCTATCCAAGTGA
CTGGAGAAGTCTACATTAATGCCCAGGAAATCGTGTTCGCTTACAGCAAG
ATTGCTGAAAGTGCGAAGGCTTCTGCATCAGAAACTGCCAATTATTACAA
AACATCAGCTCAAGAAACAGCAAACTATTACAAAACATCTGCACAAGAGA
CTGCAAATTATTACATCGAAAAGCTCAGTGCTTCACGCATCGGTCAGCAA
ACCACAACCCAACTTGATAATGCTGTTTCATTTTCGGAATTGATGGTAGA
GATATGTTTTCCAACTGATGGGAGTTGTCCAGATGATTTGAAAGAACTAG
AACAGGCTGAAGAAGACGAAGATAAAGGACTTTTAGTTCGAGCTGGAAAC
CTCAAAGAACGAGCTGTCAGACGTGGAACACGTAAAGTTATGTCTTATAC
ACCAGTCCAAACTACCATTGACAATCTGGAAAAATTGATCAGTGTGCATC
GGAAGCATTAGCAAAAGTGCAAGAGAAACTTCCAATTGTTAATCAAACTC
CCACACAGATGGAAGTCGACACACTGCCAGATACACCACCAAATGAAGTG
AAAAGCTTCCATGAAAGATTGTCAGAAATTCCAATGTACTCAATGACATT
GTCTCAGCTCACAAGTGCTTACACATCATTGAAGGATCGTAATCAAGTTT
TGAACCAAGCTTTTACCACTGGGGAAAAGTATTTTACCCAAGCTAGTGAA
GTTGCAAAGCCAGTTGTTCTTTCTGCTACAGAAACTGCACTAAAAGCTGC
AAAACCAATTGTTGGTGACATAACAGACCCAGATGTCTGGAGATAACAGA
AGTGACGCTCACTCACTGACTGAACTTCCGCATGCAGTTGTTGAAATGGC
TGAAAAGTACTACAACAATCTTGCAACAGAAGGAATGACAATAGACCAAG
TCAAAGAAAAGGCTGTTGCATTTGTTTACGTCCCTGCTCAAGTTGTCTCT
GAGTACCTTCGAACCTCGCGTCTCGTCCAATGGGTCGTACCGAAATCAAT
TCAAACCGAAAGAATTGAAATGGTCGAAGTTACACACTCCTCAAGTCCCG
TTCAACCAGAAGCTTCGACTAATGGCNAAGTTATCTCTGAGTATCTTCGA
ACCTCGCGTATCGTCCAATGGGTCGTACCGAAATCAATTCAAACCGAAAG
AATTGAAATGGTCGAAGTCTCACGCTCCTCAAGTCCCGTTCAACCAGAAG
GTTCGACTAATGGTACCTCTGATACAAGTCCAGTACATACAGCTCAAACA
AATGAGAAAGAACTGATTGAATAAGTTCAATATGCACAGAAGCAAATTTC
TGAAATGACCCAAAAGGTTTTACAAGGAACCAATTATGTTGCAACCAAAA
GCCTTGAAGCGAAAGATCTATTGAAGGAGAACTACCCAACAATCAAAACT
TTAGCTCAAGAAACTTTAGTAGAAGGTACTGAACTCATCGGCAAGAAGTG
GGATCACGTCTATAAGACTAGTATGTACATTCCAAAGAAAGCTATCCAAG
TGACTGGAGAAGTCTACATTAATGCCCAGGAAATCGTGTTCGCTTACAGC
AAGATTGCTGAAAGTGCGAAGGCTTCTGCATCAGAAACTGCCAATTATTA
CAAAACATCAGCTCAAGAAACAGCAAACTATTACAAAACATCTGCACAAG
AGACTGCAAATTATTACATCGAAAAGCTCAGTGCTTCACGCATCGGTCAG
CAAACCACAACCCAACTTGATAATGCTGTTTCATTTTCGGAATTGATGGT
AGAGATATGTTTTCCAACTGATGGGAGTTGTCCAGATGATTTGAAAGAAC
TAGAACAGGCTGAAGAAGACGAAGATAAAGGACTTTTAGTTCGAGCTGGA
AACCTCAAAGAACGAGCTGTCAGACGTGGAACACGTAAAGTTATGTCTTA
TACACCAGTCCAAACTACCATTGACAATCTGGAAAAATTGATCAGTGTGC
ATCGGAAGCATTAGCAAAAGTGCAAGAGAAACTTCCAATTGTTAATCAAA
CTCCCACACAGATGGAAGTCGACACACTGCCAGATACACCACCAAATGAA
GTGAAAAGCTTCCATGAAAGATTGTCAGAAATTCCAATGTACTCAATGAC
ATTGTCTCAGCTCACAAGTGCTTACACATCATTGAAGGATCGTAATCAAG
TTTTGAACCAAGCTTTTACCACTGGGGAAAAGTATTTTACCCAAGCTAGT
GAAGTTGCAAAGCCAGTTGTTCTTTCTGCTACAGAAACTGCACTAAAAGC
TGCAAAACCAATTGTTGGTGACATAACAGACCCAGATGTCTGGAGATAAC
AGAAGTGACGCTCACTCACTGACTGAACTTCCGCATGCAGTTGTTGAAAT
GGCTGAAAAGTACTACAACAATCTTGCAACAGAAGGAATGACAATAGACC
AAGTCAAAGAAAAGGCTGTTGCATTTGTTTACGTCCCTGCTCAAGTTGTC
TCTGAGTACCTTCGAACCTCGCGTCTCGTCCAATGGGTCGTACCGAAATC
AATTCAAACCGAAAGAATTGAAATGGTCGAAGTTACACACTCCTCAAGTC
CCGTTCAACCAGAAGCTTCGACTAATGGCNAAGTTATCTCTGAGTATCTT
CGAACCTCGCGTATCGTCCAATGGGTCGTACCGAAATCAATTCAAACCGA
AAGAATTGAAATGGTCGAAGTCTCACGCTCCTCAAGTCCCGTTCAACCAG
AAGGTTCGACTAATGGTACCTCTGATACAAGTCCAGTACATACAGCTCAA
ACAAATGAGAAAGAACTGATTGAATAAGTTCAATATGCACAGAAGCAAAT
TTCTGAAATGACCCAAAAGGTTTTACAAGGAACCAATTATGTTGCAACCA
AAAGCCTTGAAGCGAAAGATCTATTGAAGGAGAACTACCCAACAATCAAA
ACTTTAGCTCAAGAAACTTTAGTAGAAGGTACTGAACTCATCGGCAAGAA
GTGGGATCACGTCTATAAGACTAGTATGTACATTCCAAAGAAAGCTATCC
AAGTGACTGGAGAAGTCTACATTAATGCCCAGGAAATCGTGTTCGCTTAC
AGCAAGATTGCTGAAAGTGCGAAGGCTTCTGCATCAGAAACTGCCAATTA
TTACAAAACATCAGCTCAAGAAACAGCAAACTATTACAAAACATCTGCAC
AAGAGACTGCAAATTATTACATCGAAAAGCTCAGTGCTTCACGCATCGGT
CAGCAAACCACAACCCAACTTGATAATGCTGTTTCATTTTCGGAATTGAT
GGTAGAGATATGTTTTCCAACTGATGGGAGTTGTCCAGATGATTTGAAAG
AACTAGAACAGGCTGAAGAAGACGAAGATAAAGGACTTTTAGTTCGAGCT
GGAAACCTCAAAGAACGAGCTGTCAGACGTGGAACACGTAAAGTTATGTC
TTATACACCAGTCCAAACTACCATTGACAATCTGGAAAAATTGATCAGTG
TGCATCGGAAGCATTAGCAAAAGTGCAAGAGAAACTTCCAATTGTTAATC
AAACTCCCACACAGATGGAAGTCGACACACTGCCAGATACACCACCAAAT
GAAGTGAAAAGCTTCCATGAAAGATTGTCAGAAATTCCAATGTACTCAAT
GACATTGTCTCAGCTCACAAGTGCTTACACATCATTGAAGGATCGTAATC
AAGTTTTGAACCAAGCTTTTACCACTGGGGAAAAGTATTTTACCCAAGCT
AGTGAAGTTGCAAAGCCAGTTGTTCTTTCTGCTACAGAAACTGCACTAAA
AGCTGCAAAACCAATTGTTGGTGACATAACAGACCCAGATGTCTGGAGAT
AACAGAAGTGACGCTCACTCACTGACTGAACTTCCGCATGCAGTTGTTGA
AATGGCTGAAAAGTACTACAACAATCTTGCAACAGAAGGAATGACAATAG
ACCAAGTCAAAGAAAAGGCTGTTGCATTTGTTTACGTCCCTGCTCAAGTT
GTCTCTGAGTACCTTCGAACCTCGCGTCTCGTCCAATGGGTCGTACCGAA
ATCAATTCAAACCGAAAGAATTGAAATGGTCGAAGTTACACACTCCTCAA
GTCCCGTTCAACCAGAAGCTTCGACTAATGGCNAAGTTATCTCTGAGTAT
CTTCGAACCTCGCGTATCGTCCAATGGGTCGTACCGAAATCAATTCAAAC
CGAAAGAATTGAAATGGTCGAAGTCTCACGCTCCTCAAGTCCCGTTCAAC
CAGAAGGTTCGACTAATGGTACCTCTGATACAAGTCCAGTACATACAGCT
CAAACAAATGAGAAAGAACTGATTGAATAAGTTCAATATGCACAGAAGCA
AATTTCTGAAATGACCCAAAAGGTTTTACAAGGAACCAATTATGTTGCAA
CCAAAAGCCTTGAAGCGAAAGATCTATTGAAGGAGAACTACCCAACAATC
AAAACTTTAGCTCAAGAAACTTTAGTAGAAGGTACTGAACTCATCGGCAA
GAAGTGGGATCACGTCTATAAGACTAGTATGTACATTCCAAAGAAAGCTA
TCCAAGTGACTGGAGAAGTCTACATTAATGCCCAGGAAATCGTGTTCGCT
TACAGCAAGATTGCTGAAAGTGCGAAGGCTTCTGCATCAGAAACTGCCAA
TTATTACAAAACATCAGCTCAAGAAACAGCAAACTATTACAAAACATCTG
CACAAGAGACTGCAAATTATTACATCGAAAAGCTCAGTGCTTCACGCATC
GGTCAGCAAACCACAACCCAACTTGATAATGCTGTTTCATTTTCGGAATT
GATGGTAGAGATATGTTTTCCAACTGATGGGAGTTGTCCAGATGATTTGA
AAGAACTAGAACAGGCTGAAGAAGACGAAGATAAAGGACTTTTAGTTCGA
GCTGGAAACCTCAAAGAACGAGCTGTCAGACGTGGAACACGTAAAGTTAT
GTCTTATACACCAGTCCAAACTACCATTGACAATCTGGAAAAATTGATCA
GTGTGCATCGGAAGCATTAGCAAAAGTGCAAGAGAAACTTCCAATTGTTA
ATCAAACTCCCACACAGATGGAAGTCGACACACTGCCAGATACACCACCA
AATGAAGTGAAAAGCTTCCATGAAAGATTGTCAGAAATTCCAATGTACTC
AATGACATTGTCTCAGCTCACAAGTGCTTACACATCATTGAAGGATCGTA
ATCAAGTTTTGAACCAAGCTTTTACCACTGGGGAAAAGTATTTTACCCAA
GCTAGTGAAGTTGCAAAGCCAGTTGTTCTTTCTGCTACAGAAACTGCACT
AAAAGCTGCAAAACCAATTGTTGGTGACATAACAGACCCAGATGTCTGGA
GATAACAGAAGTGACGCTCACTCACTGACTGAACTTCCGCATGCAGTTGT
TGAAATGGCTGAAAAGTACTACAACAATCTTGCAACAGAAGGAATGACAA
TAGACCAAGTCAAAGAAAAGGCTGTTGCATTTGTTTACGTCCCTGCTCAA
GTTGTCTCTGAGTACCTTCGAACCTCGCGTCTCGTCCAATGGGTCGTACC
GAAATCAATTCAAACCGAAAGAATTGAAATGGTCGAAGTTACACACTCCT
CAAGTCCCGTTCAACCAGAAGCTTCGACTAATGGCNAAGTTATCTCTGAG
TATCTTCGAACCTCGCGTATCGTCCAATGGGTCGTACCGAAATCAATTCA
AACCGAAAGAATTGAAATGGTCGAAGTCTCACGCTCCTCAAGTCCCGTTC
AACCAGAAGGTTCGACTAATGGTACCTCTGATACAAGTCCAGTACATACA
GCTCAAACAAATGAGAAAGAACTGATTGAATAAGTTCAATATGCACAGAA
GCAAATTTCTGAAATGACCCAAAAGGTTTTACAAGGAACCAATTATGTTG
CAACCAAAAGCCTTGAAGCGAAAGATCTATTGAAGGAGAACTACCCAACA
ATCAAAACTTTAGCTCAAGAAACTTTAGTAGAAGGTACTGAACTCATCGG
CAAGAAGTGGGATCACGTCTATAAGACTAGTATGTACATTCCAAAGAAAG
CTATCCAAGTGACTGGAGAAGTCTACATTAATGCCCAGGAAATCGTGTTC
GCTTACAGCAAGATTGCTGAAAGTGCGAAGGCTTCTGCATCAGAAACTGC
CAATTATTACAAAACATCAGCTCAAGAAACAGCAAACTATTACAAAACAT
CTGCACAAGAGACTGCAAATTATTACATCGAAAAGCTCAGTGCTTCACGC
ATCGGTCAGCAAACCACAACCCAACTTGATAATGCTGTTTCATTTTCGGA
ATTGATGGTAGAGATATGTTTTCCAACTGATGGGAGTTGTCCAGATGATT
TGAAAGAACTAGAACAGGCTGAAGAAGACGAAGATAAAGGACTTTTAGTT
CGAGCTGGAAACCTCAAAGAACGAGCTGTCAGACGTGGAACACGTAAAGT
TATGTCTTATACACCAGTCCAAACTACCATTGACAATCTGGAAAAATTGA
TCAGTGTGCATCGGAAGCATTAGCAAAAGTGCAAGAGAAACTTCCAATTG
TTAATCAAACTCCCACACAGATGGAAGTCGACACACTGCCAGATACACCA
CCAAATGAAGTGAAAAGCTTCCATGAAAGATTGTCAGAAATTCCAATGTA
CTCAATGACATTGTCTCAGCTCACAAGTGCTTACACATCATTGAAGGATC
GTAATCAAGTTTTGAACCAAGCTTTTACCACTGGGGAAAAGTATTTTACC
CAAGCTAGTGAAGTTGCAAAGCCAGTTGTTCTTTCTGCTACAGAAACTGC
ACTAAAAGCTGCAAAACCAATTGTTGGTGACATAACAGACCCAGATGTCT
GGAGATAACAGAAGTGAC

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_005373	XLOC_005373	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
Perilipin related protein	TCONS_00009628-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000097	supercontig	sc0000097:217027..223266 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
89.6557	95.2005	222.408	227.468	27.1839	25.0007	55.0018	71.3871	60.5768	197.021	124.939	40.8946	97.4021	66.7749	86.8772	118.102	38.7855	56.1708	88.1853	230.871	30.1941	35.7806	38.918	39.4876	81.376	88.5242	453.663	276.696	173.154	135.228

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR004279	Perilipin

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00009628 vs. Swiss-Prot (Human)

BLAST of TCONS_00009628 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

You are here

TCONS_00009628 (transcript) - C. hemisphaerica