TCONS_00009632 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009632
Unique NameTCONS_00009632
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2043

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009632 ID=TCONS_00009632|Name=TCONS_00009632|organism=Clytia hemisphaerica|type=transcript|length=2043bp
tttcagGCTAGATAACATAACCTAGagatacaaaaagaaagaaagaattt
tcatttcatttctggTTTTTTGTTTGCTGGTTAGGAGGCAGTATTTATTT
GGGTTGTGTATTAATCAAAAGGTGGTAGGTGTCAAGCAACTACCCAGGAA
GTATCAAGCAACTACCACAAGGAAGGATGGAGTCCTCCACACTGGTCATT
CTATTGGCTTGTATCGTATGTGCGGCAGCTAGATACGAGGTGAATCTATT
GAACGCATTGGAAGTTGACGAAAGCAGATCAGGTGTCCAATCAATCGATG
GACGATACAGAGCATATCAATTTTATATGTACGCCGAAGAAATCAAAGCT
GAGAAAGAAGCACGTGATGAACTTATCCGTGATTTCATCCGAGATAAAGA
ATTTGTATTTATTGCTAATGTTAGACATGATAAAAGCACAGCTAGTACTT
TGTTTTCCATGATGACTGAAAGCGGGAAGATCAAATTCAGTATCTGGATT
GATGctgatggaaaaaaaattggaatcaGAATGCACAATAGAAACGCAGG
AAAGAAATCCATTACCTTCCGTAACGTTCCCATCAAACAAAGCAACTGGC
ACCGAGTCGTTATCCGATTCGAAGATACGGACACGTCAAAACCAACTGTA
ACCCTATACGTTGATTGTATGGAAGTTGATAAACAAAGCTTTGATGTCTC
TATGAAAGAAACATTCATGGAAGACAGCTTGAACTCCGAACTCAGATTGA
ATCAATACCAAAGCATCTCTGGCAAAGACCCTTTGAAATTTATCGGTGGT
TTACAAGATATTATGTTTTCGTTCACAAGAAAATATAAATTCTACATCGA
TCCAAAATGGTGTCTTAACATGGATGTGCAAGGTACTTCTGGGCTCAGAG
CTCACCAAGATCCGCGCGTAGTGGGAGGAAATAGTGGTTATTATGGCAAA
GATATTGCTGATATCCAATCTGCTGTCAAAAATATGCAATTCCAAATGGC
AGCCCAAGTCAACGAAATCCGATGGATCCGAAAATGGATTCAACAGTGTT
CCGAATGTAAAATCGGAGAAGGAAAAGCAGCAAATCTTACAGATCGTGTT
TGTACAGTTGGAAAATGTGCAAGTGATGCTAATTGTAATGAGCTCGGAAA
CGGTCGACATGAGTGCGAATGCAAAACAGGGTTTGCTGGAAATGGAGAAC
TTTGTGCTAAAGATACTGACAAAGATGGTATCCCAGACAATGAGATTCAA
TGTGAAGGAAAGAAATGTAGAAAAGATAACTGTCCAACTTTCCCCAACTC
TGGACAAGAAGACGCCGACAAAGATGGCAAAGGTGATGCTTGCGACGAAG
ATGATGATAACGATGGAATATTAGACGAAGACGATAACTGCCCATTTGTC
GCCAATCCCAACCAAAACGACGCCGACGGTGATCGCAAAGGAGATGCTTG
TGATAATTGCCCCAACACGCCGAACAATGATCAACGTGATAGCGATGAGG
ACGGAAACGGAGATGCATGCAGTCGAGACAGTGACGGcgatgGCATCCGT
GACAAAAGTGACAATTGCCCACGTGTTTCGAACATTGACCAATTAGACGA
AGATGGTGACTCAGTGGGAGATGCTTGTGATAACTGTAAAACGAAATACA
ATCCAACACAAGAAGACACTGATAAAGATGGAGTTGGTGATGTATGTGAT
TCTGGCAACGATCTTGACAAGGACGGTATTCAAGATGACAAAGACAATTG
TCCATACGTTCCCAATGCTGATCAACTGGATTCTGACAACGATGGAGATG
GTGATGCTTGtgacgatgatgatgataatgataAGATTGTTGATGGTGAT
GATAATTGCCGAATCATTCCAAACCCTGATCAAAAAGATTCTGACAGCAA
TGGCATTGGTGATGCTTGTGACCCAGATTTTGATGGAGATGGTAAGACCA
AAGGAGATGTTTGTCCAGAGAATCCCAACATTCAAAACACAGACTTCAAC
AACTACGTTCATATCATGTTGGATCCTATTGGATCATCACANN
Run BLAST on NCBI

transcript from alignment at sc0000097:233709..248140-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009632 ID=TCONS_00009632|Name=TCONS_00009632|organism=Clytia hemisphaerica|type=transcript|length=14432bp|location=Sequence derived from alignment at sc0000097:233709..248140- (Clytia hemisphaerica)
TTTCAGGCTAGATAACATAACCTAGAGATACAAAAAGAAAGAAAGAATTT
TCATTTCATTTCTGGTTTTTTGTTTGCTGGTTAGGAGGCAGTATTTATTT
GGGTTGTGTATTAATCAAAAGGTGGTAGGTGTCAAGCAACTACCCAGGAA
GTATCAAGCAACTACCACAAGGAAGGATGGAGTCCTCCACACTGGTCATT
CTATTGGCTTGTATCGTATGTGCGGCAGCTAGATACGGTAGGAGACTTTC
TTCAAATTACATCTGCAGTCTCCTTTAGATCACATGGGAACGATATTTAT
CTGAATCAAGTTATCAGTGAGGCCAGCAAAGCCCACCTGTTACCCCCTTA
GTCTTCTAATTCGAGAAACTATTCAAGGTGCTAAGGTGGACTAAAGTTCT
GTTAATCAGTTGTACGCTACTAAAGGTTGACGAAAGGGAGATAATTAACT
TCAACAAAACCCAGCAAAAACACCCCCTGTCTCACAACGCCAGTGAAACT
TTTCCCCACAGCGGGTGAAAACTTTCCATGGAAATCTCAATGGGGCTGAA
ATTGTAAGATTCTTTTCCCATCGGGGATAAAATTTTCGCCAAACTTTCCA
TCGGCGCTAGGTTCCAAGCAGTTCTCTGACACAGGGTTGGGCGGAGGGGT
TACTTAGGCGAAAATGGGTGCTGAGTATGTGCGGACGGTAAAGGTCGGTT
TTTAGGAAATTCATTTGAAAAAGTCTCTTTAAGGGTAGAGAGTTTTCAAA
AATCGAAGAAAATTTTTCAAAAAGTCATTCTAAGGGTCACCTTTTCAGCA
AAAATAAGGGTCGGTTTTTGGAGGTCCCATCCGCACATACCCCTCATCCG
CCAACCCTAGTACCCCTCTACGGGGGTTGTAACAATTTGAGTAGCAAATT
GAGTAGAACCATCAACATAGCTACGTAGTTCTTCCTTATATAAAATACTC
TTTAACTTAATAAAATATAATCGATTGCTAGCTCAAGGGTCTCGTTTCAC
TATTAAGTCGATTAATACAAGATACGATATGTAGTAAAAAACGAGAGATG
TTTGTATGTAAGAAACTTTAAGTGTTAAATTTTTTGTTTAGCCCACAAAA
TCTCCTTACAGAGAGCTTAAGGTTACCGAGTTTCCGGTTTGTTATATAAG
TAAGCCTTTCTACAAAAGTTTGTCCCAAGTAGTAAAAGTAACTCTGGTGT
TGCGAAAAGAACTTTCACCTAACAGACCGCGTGTTTTAAGTTCTAATTTT
GGGAATAACCAGCAATCCCAGCTGGCACACAACGTTGTTTCAACGTTTAT
CTAATGTTCATAACGTCCATATAACGTTAGGTGAACGTTGAAACAACGTT
GTGTGCCAGCTAGGGGGCAGCTGGGTTGGGAATAACCAACAATACTTAGG
CCTTTTAGTCGGGGTAAAAAATCAACAATTTTCTTACCCGAACAATAGTT
AACCGTTTTCAAAACTAAAAAGCCAAGTCTGATTTTTATTCTTTATCAAC
TATGGTGAGAATTTTACTTTCGGAAGCGCCGCTTAAAGAGCTCATCCGGA
AAATGATGATGTGACAAATTCCGGTAGAACAGAGAAGCTCTATGAAAAAA
GCTCGAGAGATAAAAGAAGAAGAATTGCTTAGGAATGATAGGTCACCACT
TTGGAAATGCTTTATTCATGGTCACTTTTTTACAGTTTCCTGAGTATGTG
CACCTGACAAGACCCCCCCCCCTCGAACAAGTGCGATGCTTGACAAGCCA
AATGAGGTTTTTTAAATTGAGATTCAACAGGTGAATAAACTTTTTCAAGC
CCTATCATATCGCAAAGTCCCTTTTTTTACCCCTTGGTGCCTTGGCGAGG
TCTGAGCCCCAAAAAATGTTTTAGATTGTCATTGAAAGAAAGTGTTATTA
ACAGGGAAACATCTAATTGCTGTTGCAGAAGGTACTCAAAATTGATGATG
GTGGAGAGGGTTTTCTCGTGCTATTACAGTTGACTCTCTAATTCGATCTT
CAAGCGAGATCAAAAATTTTCTTCGAATTAGAGAAAAATCCGAATTACAG
AGAGTAATTCATACCACTCTCCCCATCTGAGGGGACCAATGTTTCAAGTC
GAATCACAGAAAAATTCAAATAATAGAGGTTCGAATTAGAGAGAGTCGAT
TGTATTCCTTTTATAGGAATAAATATTCTCTATAAATCATCATTGAGTAC
CTTCTCTTGGTAGCCGCCTTTTAATCATCATCACTGTTTAAGGGTCTGAC
AAAAGAAAGTCTTTATTCTTTATTATTTCAATTCGCGTGACTCGAGTACA
GTATCCATTACATGAGACTGCAGAGTACGTACACGTACACAAACTATATA
ATAATATAAGGCTTCGAGGCCCAAAAATTTAAGAACATTCTAAGAACATT
CTAAGGCTTTGGAGACTTAAAAACATGCATTTTCTTAAGAAATTACATCA
AAATGCTCAAAAAATGCTGAAAATAAGAACATTTTAAGAACATTTTTAGG
CTTCAAATCCAAAAAAACTTAGAACATCCGAAGGCTTCGAAAATGTTTGA
CGTTCTTATAAAAAAAAACGTGTATAGAGAAACATTTTTAACAAGTAAAT
ACTTATCTCAAGGTTAATAAGGGTTCTCTTCGGAAAGGAATGTTAAGTGA
ACTATAAAACTAAAGTTCAAGTATCATAGTTATGTAGAAATGCGGTTGTG
TGAAGAGAACTTTTGAGAGAGCTCGAAGCTTTATTGAAAACATTTTGATT
TAAAATACACAGTAAACAGTGACCTAAAACATCTGAGTGATGAAAAAACA
AACTCACATTTTGTCATTTATTCCCCTTATGCTCCTAATATTGTTTTGAC
GTCCGCCATATAAACTGAAATAGAAAAAGGTGTTTAGGAATTCCAATAAG
TTGTCTGAAAGTATTCTCTATCGTAGCCGCCAATTGCCGCGCGGGAATTT
TCCCCCTAAAGTCGACCCAATCCTTTTTGACAGCTTTTTCTATTGTCTAT
AGGTGCGAAAAAAGACTGGGACGGTTTTAGGGTGGTTAAACGGACAAAAA
AATGCCTGCGCGGCAATTGGCGGCTACGGTCGAAAAGGTGTATTGAAAAG
ACGAAGCTTTCACTGGTTTTTAAAATATAAACATGTTAAACAGAAAGAAT
TTACTTTCCTAAAATCTTGAAACATCAAAAGTAATGAGGTCATCCGCTTG
AAGTTGGGTTATTACAAATCTGAGTGAAAATATCAAAACATAAAAATGTT
ATTCTAAATGATCCATCAAGGAGCTCCTTCAAGTGGGCGAACAGTCACAC
AACAACAAACATAGAAATAATTAAAAATAAGAAGAATTTTGAACTGTAAC
CTATTCGCCAGACTCGGTGTAATTTTTCCTTTGGGAACCGTCCACATAGC
ACGTACGCACTAAAATGTCGAAAATCGAGTACCCCCTCCCCCTGTACGCA
AGCGTACGCAAATGGCTATACCTCCTGATAAGTACGTACTTTTTCATTCA
CCCCCCTCTCCCCCTCGGCTGAAGAAAATTTCGAATTCAAATAGTTTGGT
TCGGACCTTTATTTCATACATGAAACACAATGTTTATTAAAAAAACCTTT
TCTTTTCTTTGATGCGTATAAGAAGTGTAAAAGTCGACAAAAAAACAAGA
AAAAAAGTGCTATGAAAAAATATTCTCCGCGTACGTACATTTTCCTTTGA
CCCCTCCCCTGCCCCTGTACGCAAGCATACGCTTTTGAGAAGACCCCTCC
TCCCCCTTAGTACGTACGTACTATGTGGACGGCCCCTTGGTTAAAATGGA
CGTAAAACTTCCTAGTAAGCGAGAAAAATATCTTACAATTAGCTAACACC
TATCTTCAATGGTATGTGCAACTCGGAGAAATTAGGTAATTGATAAAATT
TATAGGTACGTTTAAAACTTCTATATCACGTGGTTTATTTTAGAATACAG
GTTTTTTTAATGAGCAAACTATAAAGGTTTCGATGTCCAAAATATTAAGA
ACAAGTTAAGAACATTTTAAGGTTTTGCGAAAAATTTTTTCAAGAAATTG
CAAAATAAATAAACTTAAAATGGTGGAAACAAAATGATTTTAAAACACTC
AGGTGAATCTACTGAATGCACTGTTTATGGGTAATTTTGAATGACCGGGG
GATCAACTGATGCTTGTCCGGGGGGGGGGGAAGATCTGTTGTCCGGGGGT
CATAATTCACTATGTCCGTGGGGAGGTAAATTTCCAAAAACGACATATAT
AAAACAAATATCCTCCAACCTCCATATTCAAATTTTTTCTGGAAAAGCCC
AATGCTCTTCTAAAACAACGTCATTTTTTCTCTTCTGTTCCAGAGGTGAA
TCTATTGAACGCATTGGAAGTTGACGAAAGCAGATCAGGTGTCCAATCAA
TCGATGGACGATACAGAGCATATCAATTTTATATGTACGCCGAAGAAATC
AAAGCTGAGAAAGAAGCACGTGATGAACTTATCCGTGATTTCATCCGAGA
TAAAGAATTTGTATTTATTGCTAATGTTAGACATGATAAAAGCACAGCTA
GTACTTTGTTTTCCATGATGACTGAAAGCGGGAAGATCAAATTCAGTATC
TGGATTGATGCTGATGGAAAAAAAATTGGAATCAGAATGCACAATAGAAA
CGCAGGTATGTTTTTGTCAATGTTCAATTAAAATAAAGNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCAGCTTATTAATTTT
TGGGAGAATGTTTTTAAAAGTTCCCTCTTTTGTCTGGTGTATATTAGCCT
TCTTTAAAAAATCTTCCACCCAGGAGGAGTATCCATAGCGTGTAAATGTA
GCCTTAGTGATACTTAATTTTAAACGAAAAAGGGAGTCAACCTTTAAAAT
AAAAGTAACAACAAATGCAGTCCAAGTCTCATTGAAAATCAATGAAGATT
TGTAGCAGTGATATTTTAGCCCAGCTGGCACACAACGTTGTTTCAACGTT
CATCTTAGATTCATCGAGATTTTCCAGATTTTTATCATTTTTCATTCACA
TTTTTTCAAATCTGTCACATGTGTTCTTTTATAGGAAAGAAATCCATTAC
CTTCCGTAACGTTCCCATCAAACAAAGCAACTGGCACCGAGTCGTTATCC
GATTCGAAGATACGGACACGTCAAAACCAACTGTAACCCTATACGTTGAT
TGTATGGAAGTTGATAAACAAAGCTTTGATGTCTCTATGAAAGAAACATT
CATGGAAGACAGCTTGAACTCCGAACTCAGATTGAATCAATACCAAAGCA
TCTCTGGCAAAGACCCTTTGAAATTTATCGTAAGTTAATACATCAGTGGT
TGTAATTTTTCATCTTAAACGGAAAATTAGCCTATAATAGACGTCTTTAT
TTCTACGCTGTAACGTCTATTCCACTTTGCGTTTTTTTCGAATATTTTGA
GCCCAGGTTTTCAATTTTTTGACTTGAACTTTCGAAGCTCCTGAAGCAGT
GAAAAACTCGAATTCGCGTCAAAGCACTTGAAAGGCTTCTATTTTACAAA
AATCATTAAAGTGGAACTCACTAAGAAACGGAATGAAAAATCCCGGTTTT
GGTGCGGTGCTCGCTTACGGAAAATAGGATTTACACACAAATAGGCAGTC
CCGGATTTTTCAAATTTCACATACTGCGCAAGAGCTTCGAAAGTTTAAAA
GTGACGTCAAAAAGATTGAATGTTTGGAACACCAAAAGCTGGCCCAGTCG
CAAAGTCATCGCATTGATGAAAGATCCTGCATGAGTTTGCTTTGAGAATT
TCAGCAGTTGCCTAATAGAATTGCCCTTTATTCGTCCTCGATTTCAGGCT
TGAAATGTTCTTTTTTGTATCCTTTATATAGGGTGGTTTACAAGATATTA
TGTTTTCGTTCACAAGAAAATATAAATTCTACATCGATCCAAAATGGTGT
CTTAACATGGATGTGCAAGGTACTTCTGGTAAGCGCATCAAAACATAAAT
ATTGTTATATCAAATTTATGTTTGTTTTAATGTTTTCTACGGGAAGAACC
CGGTTTTTACAAGTAGTGGCAAATTTTATACAACTTTTGTCTAGTTCNGA
AGATACGGACACGTCAAAACCAACTGTAACCCTCTACGTTGATTGTATGG
AAGTTGATAAACAAAGCTTTGATGTCTCTATGAAAGAAACATTCATGGAA
GACAGCTTAAACTCCGAACTCAGATTGAATCAATACCAAAGCATCTCTGG
CAAAGACCCTTTAAAATTTATCGTAAGTTAATACATCATTGGTTGTAATT
TTTCATCTTAAACGGAAAATTAGCCTATAATAGACGTCTTTATTTCTACG
CTGTAACGTCTATTCCACTTTGCGTTTTTTTCGAATATTTTGAGCCCAGG
TTTTCAATTTTTTGACTTAAACTTTCGAAGCTCCTGAAGCAGTGAAAAAC
TCGAATTCGCGTCAAAGCACTTGAAAGGCTTCTATTTTACAAAAATCATT
AAAGTAGAACTCACTAAGAAACGGAATGAAAAATCCCGGTTTTGGTGCGG
TGCTCGCTTACGGAAAATAGGATTTACACACAAATAGGCAGTCCCGGATT
TTTCAAATTTCACATACTGCGCAAGAGCTTCGAAAGTTTAAAAGTGACGT
CAAAAAGATTGAATGTTTGGAACACCAAAAGCTGGCCCAGTCGCAAAGTC
ATCGCATTGATGAAAGATCCTGCATGAGTTTGCTTTGAGAATTTCAGCAG
TTGCCTAATAGAATTGCCCTTTATTCGTCCTCGATTTCAGGCTTGAAATG
TTCTTTTTTGTATCCTTTATATAGGGTGGTTTACAAGATATTATGTTTTC
GTTCACAAGAAAATATAAATTCTACATCGATCCAAAATGGTGTCTTAACA
TGGATGTGCAAGGTACTTCTGGTAAGCGCATCAAAACATAAATATTGTTA
TATCAAATTTATGTTTTTTTTAATGTTTTCTACGGGAAGAACCCGGTTTT
TACAAGTAGTGGCAAATTTTATACAACTTTTGTCTAGTTCAAATTTGCCA
CTACTATGGCTAAAACCGGGGTATTTCCGTAGAAAACATTACGTCATGAA
TATCATGAATTTCAGGATCACACATAAAAGGACCTTCTGGCCCTCGAGCT
CCAACCCTGAACCTAACTCATACTAGAGATATTGGAGAAGCACGGAATGA
TAGATAGGGGAAAATAGGATCGTCTTTGAGGTTTGTTTTTCCGGCACTGA
TATGAAGGAGAATTTGCTCTGAAAGGGGTTTTATTCGAATCTTTCTTTAA
TTCGAACTAGTTCTCAGTCCCCGTCAGAGGAAACCCCTCGTAAAATGCTT
TCTATAATTCGAATCTCTGTTATTCAAATTCGAATTAGAGAGAGGTAACC
AAACCAAAATTACTACTAAACTAAATAAACTAAAGTACAATGATAATCGA
TTTCTTTTTACTTTCAGGGCTCAGAGCTCACCAAGATCCGCGCGTAGTGG
GAGGAAATAGTGGTTATTATGGCAAAGATATTGCTGATATCCAATCTGCT
GTCAAAAATATGCAATTCCAAATGGCAGCCCAAGTAAGTACTTTGCAATT
ATTACTATCAACTACCTACTCAATTACCAAGGCAAACCCTTTCGGAAAAG
CAAATTTTCATTCCGTTAGCAGTCAAACCCAGCTTTACCGGCCAAGACTC
AGCTGAAGCGGTCGTCAAAAAGCAAAAAAAATCCCTCAAGCTTAAAAGTT
TCGTTTAAATCTTCAAAGTTTCAGTAGTCGGACTCAATGAAAACTGCCAG
TGAAAACAAAAAGCTTTACTATATTGTTAAATTTTTGATTTGAATTAGAT
GTGCTTGTTGGAAAGATATTTATGAGTAAAAAAGATTCTAAAAAAAATTG
AAAATGAAGATGGTGATCTAATGGAAATTACTTTAAGGAACTAATTTTGT
CGACAACGCATTTCATTCTCGCTAAAGTTAAAAAAATTGTTGCTTCTCTT
TAGATACTCTGCATACTAGGAGACTTGAAACGAAACAAGGTAGAATATGG
TATTAAATCTAACTTTCTCATAATAGGTCAACGAAATCCGATGGATCCGA
AAATGGATTCAACAGTGTTCCGAATGTAAAATCGGAGAAGGAAAAGCAGC
AAATCTTACAGATCGTGTTTGTACAGTTGGAAAATGTGCAAGTGATGCTA
ATTGTAATGAGCTCGGAAACGGTCGACATGAGTGCGAAGTAAGGAAACTT
TTTACAAATGTCACCACGGCATTGATTTACTCTTAGGTTCCAAATAAACG
TCCCCCCGTTTGTTAATTTTAGAAAATTTTCCAACCCTTCCCGGACCTTA
TTAGGACCCCCTCCCCCGTTCATTAATTTTTAAGAATTTGTTCAGCTTTC
AAAGAGAAGGTCCCTTATCTGCTCTAAATAGCCTGATTTTAGCCTATATT
TACCTTTATTTTGGGTTTTCAAAAGTACAATTTCTAACCCCGGCAATAAG
CCCCCCGTTTATTAAAATTTTGAAAATCCTCCCCCGTTTATTAAAATTTT
GAAAATCCCCCCGTTTATTCGAACCCCTCCCCCCGTTTATTTGGAACCTA
AGAGTAATGACAATCCTACGTTACCTTAAGGTTGTTAAAATCGACGTTAA
TTTAAAGTTTTATGTGGAAACCTGGGTTCTAGAGTGAATACAGAACTTTC
AGCTGATGAGATTTTTATATTTTTGATGGAAAGCATTTTTAGAACATCTT
TTTGGTGCGGCCTACGGAAATGATTTTCTTTTTTATTCATGTAGTTCAGC
CACTGTATATGCACGCAAGGAGCATTGTGGTCTAGTTGTCTAAAGCGTCA
CTTACCCAGCCGGCTCGTCGGGAACCGAGAAAATAATCGAACGACTCTTT
AAAAGTAGTGATTAACTTCCAGCGGATTTTATTAAAACTACTTCTTATTC
ATAAAAAATTATTTAATGTCTCAAGAGACATAATCACCATGATAATTATA
TTTGAATACGAGGCAAGTGACGTGACGTGCCATGGTATCAGCCCCCCCCA
GAAATCTGAAGGGCGNAGAAATTATCTGCTGAATAGGGGTACCTAACTCA
AAGCAATTTTTCGAGGGGACCTAACTCGTTGGGGGCACCATGCTCAATGG
GGGCACCTAAAAAGTGGGCTGAAACCATGGTGACGTGACGTAATTTATGA
AAAGGTCTATTCTATTCTATTCAAAGTATCTACAGTTGACTTTATCTCAT
TCAAAAGTATTTCATCCTTTCCCCCTTCTAGTGCAAAACAGGGTTTGCTG
GAAATGGAGAACTTTGTGCTAAAGATACTGACAAAGATGGTATCCCAGAC
AATGAGATTCAATGTGAAGGAAAGAAATGTAGAAAAGATAACTGTCCAAC
TTTCCCCAACTCTGGACAAGAAGACGCCGACAAAGATGGCAAAGGTATGA
GATCTGGGTTCGAGGTTGGCAAATTTAAATTTTCATTTAGAAAGTTATGA
TCATTGAGTTTCAAGCCCGACGGGCTAGAGGCGAGACTCCTGGATAAGAA
ATTAAACCACTTATTTCCCACCCAGATCGCCCGCGCGTAGTTTCTACACA
AACGCTGGATTGAAACTAAAATCTCTCGCTAGATTTCAAAAAATACATTC
TTCAAAAACAAAGGAACCGCTAGGTACAATCCGTCGTCATGATTATGGCG
CGTTCTATGCGCGTTTTGGATGGGAAATAAGTTGCTTCAATTAAAGGGTT
AAAGTTTCGCCTCTAGCCCTTCGGGCTTAAAACTCAATGGTTATGATCTC
ATATAGCGGGCCATTCCTATTCGAAGTTGGAAAATTGGAACGTTAGATAC
CTCTATTTTTCATGTTTGTTAAGTTACTTGATTTGGAAGCAAACGTTCGA
ATCTGAGCATGTGATCTTATACACAAATCAAAAGTTTGTATCCATAATGG
ATGAGCTACGTAACTTAACAAAACATGAAGTACTTCTATGTAGAAGGACA
TAACGGTAACAGATCATTCCGATTCGAGATAAAATCATCTCAGTGGTACC
AGGATTATAAGAGAGGTGCTTTGTTTTCCTTATTTAAATTTGAGAATAAT
ATAAATTTAAGGACGTTTTTCTTGGGTGTATTTTGATTAAATTTAAGATT
CGGTACAGACTCTTTATTTGTGAGGTCGATAAACACACATTTAAGGAAAT
TTTTCTTGGGTGTATTTTGATTAAATTTAAGATTCGGTACAGACTCTATA
TTTGTGAGGTCGGTATGTCAGTCAGTATGCAAAGGTGGTCCTCAAATGAT
TTAAAAATACTTTGACAATATTTAAAATATTGAAAGTTATTGATTGATTT
TAAGTGCATATCACTTAGCTGTTAATTTTGAATGATATGTGTTTATCGGT
AAAAAATTTGTCGGAAAAAACTTTCCGTCGTTAAAAAGTGACGAAATTAT
TGGCAAGTGACGGATTTTTTGATGACGAACATTTCTTGCCGGCGACTTTT
TTCACCGACGAATTTTCTAACGATAAGGTAATCATTTTCTCATCCCCAGG
TGATGCTTGCGACGAAGATGATGATAACGATGGAATATTAGACGAAGACG
ATAACTGCCCATTTGTCGCCAATCCCAACCAAAACGACGCCGACGGTGAT
CGCAAAGGAGATGCTTGTGATAATTGCCCCAACACGCCGAACAATGATCA
ACGTGATAGCGATGAGGACGGAAACGGAGATGCATGCAGTCGAGACAGTG
ACGGCGATGGTAAATTTTATTGTTTTGAGCATGAGGGATTTAGTTTTGTT
TCACCTTAGATTTTGGCACCTTAGATTTTTGCTGTATTTAGGACGATAGA
ATCTAACTCTACTTTTTCATGGCTTCCACAATGCACTTTAATGAAACTTT
AATATATTATTGGTACAAAGAAATTTGCATAAAAGCCACGTAGGAAATAT
GTAGGAATAAACTACCTTCTATGGTGATTTGGTGCCTTGAGCTATTATAC
CAATGGTAAAAGGTCGGTTCCATTCCCAGAAACATAAGTGCCAATAGACT
AGAGTCTACTTTTGGCTGAACTTTGCTTTTTGATAATTTTTTATGACGCT
GAGTCCAGTGAAGTAGACTAGGAGCGTTTGGCGAGGTCGCCATTTTNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTCCGCCTAAGCAAAAGCATATTACCATATACTACCGGGCCA
CTTAATCGCGCCATCCAGTCTATAAAAAAGCTTTAAGTGGACCCCGGGCT
AAAGTACCAATAGCTTTTACCGGCCCACCTTTTTATTCTTGACACAACCT
GTCACTAATTTGTGTGCTGTAAGCGATGCAGAAACGATTGAAAGTAATAA
AATATAATCAACGAAAATCTCGAATCTCCATGCATCAACACATCATATCT
AGTCACAGCAGCAGCAGTATATGCTTGCTTACCCGAGCCGCACTGATGCA
CCTGGGAAAGACGAAACACGTATCTGCTGATATCATAGGCGTAGCAAGAT
ACCCTGTAAAATTTACGAGGGAGTGCAGACGTTTATGACATATTCATTAT
CTTTTGATAAAACAAAGACAATAATTACAGTGTCGTAAAAACTGCTCTCA
TCCATAAATTTTGCAGGGTATCTCGCTACGCCTATGGATAGATAATCTCC
ATCTATCTATCACCTATCAACTTCAAAATTCAAAACAACACGACTAATTC
ATCGCTCTAATGACGATGCTCTAATTTTCATCTATCTATCATTTTAGGCA
TCCGTGACAAAAGTGACAATTGCCCACGTGTTTCGAACATTGACCAATTA
GACGAAGATGGTGACTCAGTGGGAGATGCTTGTGATAACTGTAAAACGAA
ATACAATCCAACACAAGAAGACACTGATAAAGATGGAGTTGGTGATGTAT
GTGATTCTGGCAACGATCTGTGAGTTGATTTTTCATTTGATTCAAAGGAA
AAGATTCAATAAATTCAATTCGAAAAGCTGTAATTTCTCACAATATTTTA
TGCAAAGAAATACTGTTAAGGTTCTTGGTAAATGAAAAACTTGGTAAATG
AATGTAAATGGGTTAGCAAATATGACATTTGAGATGGATTTGGTACCATT
CTGATACAAGAATAATGGGGAAGTATACCAGGCATTATTATAGGTATATT
AGGCAGTGGAGTTGCTTACATGTTTAGAGCTTGGTTCAGTACTGTAGCTT
AACTTAAAAGCCATGCCTCTGACAGCCTAAACAATACTGTCAGATGTGTC
ACAAGCACAATATACGATAAAAAATATCAGAGATGTCTGAGAAGCACCGT
GATTCACCTATCCTAGAAAAGGGAACCGTACTGGCAAAATTACTTTCTCT
CTTCTCTCTCTTTTTTATTGTTACTGTTAGTGTTAGTCAAGTTATTTCTT
CTTTGTCCCCTTTCAGTGACAAGGACGGTATTCAAGATGACAAAGACAAT
TGTCCATACGTTCCCAATGCTGATCAACTGGATTCTGACAACGATGGAGA
TGGTAAAAGGAATTTACATTAAAGAATTTTTCCCTTCAAACTCCATGAAA
AGATTTCTCTGTTCATTTGTTTAGTTTCGAAGAAGAAGGGTAACTGTTGG
CAAAGGCAAAGCTTGTCGTGTCAGACGGAACAAATTATCCCAAAGTTTTC
AGATTTTTTAAATTTCAAAGAGACGGTAGCACTCTGAACATAGAATAAAT
CAGTCTCAATGGTGTACTAGAAGACAAGTGTCGAATGAAATGACGATTCT
TGTAATTTGATTGAAGCCCCAAATGATTTAACACAAATTTCAAGAACTTA
AGGAAGAAAGCGAAAAAAGAAACTTCTGATGAATAATGCACACATAGGAT
GGATAAGGAAGGATTTGATATAAAAGCATGCAAAAGAATAATGGTCAAGT
AAACAAAGTTAAAACTTTTTGAACGACAAATATTGAATCTTTACTTCAGG
TGATGCTTGTGACGATGATGATGATAATGATAAGATTGTTGATGGTGATG
ATAATTGCCGAATCATTCCAAACCCTGATCAAAAAGATTCTGACAGTAAG
TGACACTCCTTTAACTCTTTAACTTTAAAGTCGATAATAAATTGCCTTTA
ACATAGAAGTGAGGCTGGAAATATCATGAATATCCAAAGCAAACTGACAG
TCGATATTTAAAGAGGATAGGAGTCGACTATCTACGAACTGAGCGGAACA
GTGGAAAAAGCGGGGATTCGAACCGGGAACCCCTAGTTTCAGAAGTTGAC
GCCTTTAATACCATTTAATACCATTCAGCCATTACTTTCAATAAATAATT
TTGCGTTTGAACTTTCGCTAATCAATGTCTGTGCTACCTATCTGAATCAA
GAGTTGTGAACTGTTTCGATGAGACACATGGAAAACACAAAAAATTCATC
CAAACTCTACATGTATTTCTATCATTATTTGTTTGGGTGAACAAATCAAC
ACAAAAAGTGCCCATTGCCAAAGAATGAGCTTCCATTAATTCTACATGTA
TTTCTACACAAATTCATCTTAATTTGTTTTTCTAGGCAATGGCATTGGTG
ATGCTTGTGACCCAGATTTTGATGGAGATGGTAAGACCAAAGGAGATGTT
TGTCCAGAGAATCCCAACATTCAAAACACAGACTTCAACAACTACGTTCA
TATCATGTTGGATCCTATTGGATCATCACANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005375XLOC_005375Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009632-exon-sc0000097-1575043694:247904..248140TCONS_00009632-exon-sc0000097-1575043694:247904..248140Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1575043694:243486..243797TCONS_00009632-exon-sc0000097-1575043694:243486..243797Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1575043694:242562..242806TCONS_00009632-exon-sc0000097-1575043694:242562..242806Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1575043694:240970..241066TCONS_00009632-exon-sc0000097-1575043694:240970..241066Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1575043694:240308..240423TCONS_00009632-exon-sc0000097-1575043694:240308..240423Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1575043694:239653..239814TCONS_00009632-exon-sc0000097-1575043694:239653..239814Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1575043694:238447..238609TCONS_00009632-exon-sc0000097-1575043694:238447..238609Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1575043694:237132..237341TCONS_00009632-exon-sc0000097-1575043694:237132..237341Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1575043694:235472..235643TCONS_00009632-exon-sc0000097-1575043694:235472..235643Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1575043694:234889..234974TCONS_00009632-exon-sc0000097-1575043694:234889..234974Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1575043694:234346..234441TCONS_00009632-exon-sc0000097-1575043694:234346..234441Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1575043694:233709..233855TCONS_00009632-exon-sc0000097-1575043694:233709..233855Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1510915933:247904..248140TCONS_00009632-exon-sc0000097-1510915933:247904..248140Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1510915933:243486..243797TCONS_00009632-exon-sc0000097-1510915933:243486..243797Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1510915933:242562..242806TCONS_00009632-exon-sc0000097-1510915933:242562..242806Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1510915933:240970..241066TCONS_00009632-exon-sc0000097-1510915933:240970..241066Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1510915933:240308..240423TCONS_00009632-exon-sc0000097-1510915933:240308..240423Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1510915933:239653..239814TCONS_00009632-exon-sc0000097-1510915933:239653..239814Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1510915933:238447..238609TCONS_00009632-exon-sc0000097-1510915933:238447..238609Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1510915933:237132..237341TCONS_00009632-exon-sc0000097-1510915933:237132..237341Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1510915933:235472..235643TCONS_00009632-exon-sc0000097-1510915933:235472..235643Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1510915933:234889..234974TCONS_00009632-exon-sc0000097-1510915933:234889..234974Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1510915933:234346..234441TCONS_00009632-exon-sc0000097-1510915933:234346..234441Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1510915933:233709..233855TCONS_00009632-exon-sc0000097-1510915933:233709..233855Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1491911889:247904..248140TCONS_00009632-exon-sc0000097-1491911889:247904..248140Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1491911889:243486..243797TCONS_00009632-exon-sc0000097-1491911889:243486..243797Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1491911889:242562..242806TCONS_00009632-exon-sc0000097-1491911889:242562..242806Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1491911889:240970..241066TCONS_00009632-exon-sc0000097-1491911889:240970..241066Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1491911889:240308..240423TCONS_00009632-exon-sc0000097-1491911889:240308..240423Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1491911889:239653..239814TCONS_00009632-exon-sc0000097-1491911889:239653..239814Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1491911889:238447..238609TCONS_00009632-exon-sc0000097-1491911889:238447..238609Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1491911889:237132..237341TCONS_00009632-exon-sc0000097-1491911889:237132..237341Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1491911889:235472..235643TCONS_00009632-exon-sc0000097-1491911889:235472..235643Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1491911889:234889..234974TCONS_00009632-exon-sc0000097-1491911889:234889..234974Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1491911889:234346..234441TCONS_00009632-exon-sc0000097-1491911889:234346..234441Clytia hemisphaericaexon
TCONS_00009632-exon-sc0000097-1491911889:233709..233855TCONS_00009632-exon-sc0000097-1491911889:233709..233855Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000097supercontigsc0000097:233709..248140 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0130417	0.0471597	0.0328542	0.0310425	0.264539	0.209042	0.79263	1.28172	3.93334	5.17087	6.5513	5.21471	85.7139	68.1406	34.2632	31.7183	32.7141	45.0298	47.521	62.9548	53.4131	55.3963	18.6051	30.7797	61.6795	36.2508	35.3196	28.6173	8.98862	7.58999
Blast
[Close]
BLAST of TCONS_00009632 vs. Swiss-Prot (Human)
Match: TSP1 (Thrombospondin-1 OS=Homo sapiens GN=THBS1 PE=1 SV=2)

HSP 1 Score: 226.098 bits (575), Expect = 3.556e-62
Identity = 184/322 (57.14%), Postives = 218/322 (67.70%), Query Frame = 3 
Query: 1101 CTVGK--CASDANCNELGN---GRHECECKTGFAGNGELCAKDTDKDGIPDNEIQCEGK---KCRKDNCPTFPNSGQXXXXXXXXXXXXXXXXXXXXXXXXXXXCPFVANPNQNDADGDRKGDACDNCPNTPNNDQRDSDEDGNGDACSRDSDGDGIRDKSDNCPRVSNIDQLDEDGDSVGDACDNCKTKYNPTQEDTDKDGVGDVCDSXXXXXXXXXXXXXXXCPYVPNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCRIIPNPDQKDSDSNGIGDACDPDFDGDGKTK-GDVCPENPNIQNTDFNNYVHIMLDPIGSS 2039
            CT G   C  +A CN LG+     + CECK G+AGNG +C +DTD DG P+  + C       C+KDNCP  PNSGQED DKDG GDACD+DDDND I D+ DNCPF  NP Q D D D  GD CDNCP   N DQ D+D +G GDAC+ D DGDGI ++ DNC  V N+DQ D D D VGD CDNC  ++NP Q D+D D +GD CD+  D+D+DG Q++ DNCPYVPNA+Q D D DG GDACD DDDND I D  DNCR++PNPDQKDSD +G GDAC  DFD D      D+CPEN +I  TDF  +  I LDP G+S
Sbjct:  650 CTDGTHDCNKNAKCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCKKDNCPNLPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYNHNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLEHNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDNDGIPDDKDNCRLVPNPDQKDSDGDGRGDACKDDFDHDSVPDIDDICPENVDISETDFRRFQMIPLDPKGTS 971
The following BLAST results are available for this feature:
BLAST of TCONS_00009632 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TSP13.556e-6257.14Thrombospondin-1 OS=Homo sapiens GN=THBS1 PE=1 SV=... [more]
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